Cp4.1LG02g14170 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG02g14170
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Dead box ATP-dependent RNA helicase, putative
Location	Cp4.1LG02: 14093445 .. 14098414 (-)
RNA-Seq Expression	Cp4.1LG02g14170
Synteny	Cp4.1LG02g14170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGCAGAGATGTTGTTTAATATAATAAGCTTGAATTAAATTTTTTAATATCATTAATATTAATCTGGTCGAGGAAGACACGGCAGAAAGACGTAGCCGTACGATTAGCAAGCCTCGATCGAGCGAAGGGCACAGGGAACTCGGTGTCGATTGTTAATCGCCTTTACCGAATTGAGACAGCTTCTAAAACCCTTAAATTCCCGCTTCCGTCACCTTCTTTCCGGCGAGCTTCGGCGCCATGAGTCGCTACGACAGCCGCACCTCCGATCCCACTTCTTACCGCGACCGTAGAAGGTCTCTCTAACTTCCTCCTTTTCCTCTTTACGCTTTCGAATGTAGGTTTTTGTTTTGGTTTCTGTGGATTTTGAGCTTTTTTTAATGGTTCTAGGTTTTGCGACCTTGTTTAATTTCCACGATAACGTGGGACTTCTCGAATTGGGTAATGGGTTTTAGTTGCTTGGAGAATTACATCGTAGCTGATTGATTAGTATTCGGATTATGGTTTCAGTTGGACTTGTTTCAGCCTTTTCTAGTGGCGAAGGGTTTTCGTTGATTATACGAAGAGTTTAAAAGCTGTTTTTGGTTTCTAAAATATATTTGTTCTCTTCCCTTCTCATTGGAGCTGGAAGGTAATTGCATAATTGTTTATATATCTTGTTTTCTCTTGTGGGGTTTTATTTTACTTTTTCTTAGTTTTATAATCGAGGTTATCTATTTAAAAAAATCATGGACTGGTGACTAGATAATGTGAGTAGTAGATTTTTGTAAAGAAGGAACTTGATTAATTTATTGAAATAGCTTTCAGAAGCTGTTATGCCGAAGGAACACTTGGAAGAGATTTTATGGGAGAGGTGGAGGAGGAAAGTGGGTCCCATTTAGTGAGGTGGAACTGTGTAAATACCTGCCAATTGTTTATTTTTTTTGTTCCTTTGGCTTGATCTTGGGCTCCTTCACCTGTTTCCTTATTTTTTTATTCTTCTTTCGAAGATTAAACTCTCCAAATTTAATCAACTACTGATTTCTCATACCAATCTTCTAAATTGGCCTGTTTATAAGTTTTTTTTTATTGTAGATGTAGCTTAGTGTTTTTTTTTTTTTGGAAATTGATGTATCTACATTGACTTCTTAGGATAAACCACCTGGGTGATTCTATGTTTATTTTCTTAAATAACGGGGCTCTCTCTTTCAACCTGTTTTTTTGGGTGCTGCAGTGATTCAGGTTTTGGTGGGTCTACAGGCTATGGCAATTCAGTGCGATCCTCCTCTAGCAAGAGTGACTATCATGCTTCTGAGGCCCCAAAAAAGGTGGATTTGGATGGATTACCTCATTTTGAGAAGAACTTCTACATTGAGGCATCATCAGTGGCGGAAATGACAGAGAGAGAGGTTGAGGAGTATCGAACAAGGAGGGAAATCACTGTAGAAGGTCGCGATGTTCCAAAACCAGTCAAGTCTTTCCGTGATGTTGGATTTCCCGGTACATTCCTTATATTTCATTTAATGGTTATCTTTAAAGTTTAAGCATCATTCTTGAATGTACATTTTTTCATTATAATTTATGTATACAAAGATTATGAACATATGGCGCGTGTCAGATTATGTCATGCAAGAAATTGCCAAAGCTGGCTTCACTGAACCTACTCCTATTCAGTCCCAAGGATGGCCAATGGCACTTAAAGGTCGAGATCTCATTGGTATTGCAGAAACGGGGTCAGGGAAAACACTTGCATACCTTTTGCCTGCAATTGTCCATGTCAATGCCCAGCCAATCCTTTGTAAGAAAATAATATGCAAATTGTAAATGCCTAATTGTGGTCGTTATGTTCAAATGGACTGATTTCATTTTTTTCATTTCATAATTTTACTCAGCTCCTGGAGATGGTCCAATTGTGTTAGTTCTAGCTCCTACTCGTGAACTTGCAGTTCAAATTCAACAAGAAGCTACAAAATTTGGTGCATCTTCGAAGATTAAGAACACATGCATATATGGTGGTGTTCCCAAAGGACCTCAAGTGCGTGATCTTCAGAAAGGTAGATGGTGAAATAAATTCAAGATGTCCATACTAACCAAGTTTGAGGTGTCAATGAACACTTCCTTCTTACTACCATACCTAGTATGATTATTTCTTGTTTTTTTTGTTTCCTCTTTTCGTTGTTTATGATAGCAAGATGAATGACCCCTTCTTAAAATACTGACACCAGGAGTTGAAATTGTAATTGCTACACCGGGAAGATTGATTGATATGATGGAGTCACATCATACAAACTTACGAAGGGTTACTTACCTTGTACTGGATGAGGCTGATCGGATGCTAGATATGGGATTTGACCCTCAAATACGGAAAATTGTTTCACAGGTTTAAGTTCTACTCTACATGTAATTACATTACTGTCATTACTGTATGTCTTTGTTCTTTGCATAGGTTTAATAGATCTAAGATAGAAGTTCCCAAAAATATCAAGTAAAAAGGGTAACTTTCTGGTAGTTTGGGACCTCTGGTTTGTTCGAAAACCCCAGTTTTGGGATGTTTTGCAACTCACTTTTCTTCTAGACCTCTACTCTCTTAAATTTTTTTGGGTCTGAAAATTTTCCTGGAATTAGGTTCTGTATGATAATGCAGACTCTAAATGAATCGGCTGTTCTGAAAATTTGTTAAAACTGAGTTGTATTTTCTTGGCTTGTGGTGCAGTCCTGGTTGACAGCCAGCTTTTGAGCCAAGCATTTATGTGTGTTTTTGGTGGCTTTACTTGTGCTCATTTTTTATGGGTTAGTTGGTGTTGACATTAAATTGTGTTGTGCTTAATTCTTATAAGTTTCTCAAATGCTACTTTATTTTCAATACAGATTCGGCCTGATCGGCAAACTTTGTACTGGAGTGCTACCTGGCCTAAAGAAGTTGAACAATTGGCCAGGAAGTTTCTATACAATCCATACAAGGTAAAGACTCTAACTCATACATCCATATAAGGGGACATAAATATGGTCTTATGTTGTAACATTATTGTCAGATCTCAGATTGGTTAGAGGGATAACGAAGCATTCCTTATAAGAGTGTGGAAACCTCTCCCTAGTACGCGTGTTTTAAAACATTGTGGTGAAGCCCTTGAAGGGAAAGCTGAAAGAGAACAATATCTGTTAGCGGTGGGCTTGGGCTGTTACCAAATGGTATCAGAGCCAGACACCAAGCGATGTTCCAGCAAGAACGTTGCCCCTAAAGGGGTGGATTGTGAGATCCCACATTGGTTGGAGAGGGGAACGAAGCACTCCTTGTTAGGGTGTGGAAACCTCTCCCTAATAGACGCATTTTAAAATTTTGAAGGAAAGTTTAAAGAAGACAATACTTGCGATTATTTTTACTGTTTCGAAAGAATTCACCGTGAAATAAAGTTTTTATTTTTCAGGACAACAGCTGAAGACGGTAATTGCAAAAAAATTTCTTCAAAATATAAATATATTACTATTCTTTCTCTTGTGGGTGGAGGGGGAAGGAGAAGGGTGGTCTTTAATATTCTTAATGTTGTAATCGACTTTTTTTGTTTATGTAATTTGCACAGGTCATCATTGGTTCTCCAGACCTGAAAGCTAATCATGCCATACGCCAACATGTTGATATCGTCTCTGAAAATCAGAAATATAACAAGTGAGTGGAGCTTGTGGGATCTTTTGTCGTTTACTTATTTTTTTGGGGACCCATTTCCCATAAGCCGTTCAGGGTATGATAAGAAGTAACTGGTACTGACTAGTTTTCCAGATTGGTGAAATTGCTGGAGGATATAATGGATGGGAGTCGAATCCTGATCTTTATGGATACCAAGAAAGGCTGTGATCAAATTACCCGACAGCTTCGCATGGATGGTTGGCCTGCACTTTCAATTCATGGTGATAAGAGTCAAGCAGAAAGGGATTGGGTCCTCTCAGAATTTAGGTCTGGCAAGAGCCCTATAATGACGGCTACAGATGTTGCTGCTCGTGGTTTAGGTATGTATTGTATATGAAAATTTTAAGGTGCGACAGTGTACAGTGCTTATGCGAGATCACACATTAGTTGAGGAGGAGAACGAAACATTCTTTATATAAAAGGGTGTGGAAAACTCTCCCTAATAGACGCGTTTTAAAATCTTTGTGGCCGAACCTTTTATGAACCATTTTATTGCTCTCTCTAATATTTCCTAATATGTCATTCCATTGCAGATGTAAAGGACGTAAAATATGTAATAAATTACGATTTTCCTGGATCTCTTGAGGATTATGTACATCGAATTGGTCGAACAGGAAGAGCTGGAGCAAAAGGAACTGCATACACTTTCTTCACCGCTGCTAATGCAAGATTTGCTAAAGAACTCATAGCGATTCTTGAAGAAGCTGGACAGAAGGTTAGTCCTGAACTGGCAGCAATGGGTCGTGGTGCGCCTCCTCCTCCCTCAGGTTAGTTATTTCCATGCAAGTGAAATGGTGTTCTTGTTCCCATTACTGCCCAAATACTCTTAAGAATCAATACCAAGGATAAAAGGAATAGCAATCAAGAATGTTGTTGAGTATCAACATTTCATCTTAATCAGGTCATGGGGGGTTCCGAGATCGTGGAAGGGGTTTTGGTGGTGGCCGATCATGGAGTTGATTATCAAACTTGATGACGTCAGACAATTATTAGTGTCCTGCAGTCACTGTGTTGCCATTGCAAAAGTGGGTATGCTGAATACTACCACTTAACCCTTTGAACAGATCCATCTACTCTACTTTTACCAACACATGACAGGCAGGTGAAAGTTTGGGATTTTGATGTACAAGAAAGAGTTCCATTTTTTTTTTCCCTAGAAGAAAAATGTTAAAGTCAACGTGTATTTAGTAGACAAATTGTTCAAACATGCTGCATTACTGTATTTATGATCTTTTCTATTGTGTTGGAAAGTAAACCTCTTCATTATTTCTCAACAATATTTTTGAAGTATATGAACTAGAATGAAGTATA

mRNA sequence

ATTGCAGAGATGTTGTTTAATATAATAAGCTTGAATTAAATTTTTTAATATCATTAATATTAATCTGGTCGAGGAAGACACGGCAGAAAGACGTAGCCGTACGATTAGCAAGCCTCGATCGAGCGAAGGGCACAGGGAACTCGGTGTCGATTGTTAATCGCCTTTACCGAATTGAGACAGCTTCTAAAACCCTTAAATTCCCGCTTCCGTCACCTTCTTTCCGGCGAGCTTCGGCGCCATGAGTCGCTACGACAGCCGCACCTCCGATCCCACTTCTTACCGCGACCGTAGAAGTGATTCAGGTTTTGGTGGGTCTACAGGCTATGGCAATTCAGTGCGATCCTCCTCTAGCAAGAGTGACTATCATGCTTCTGAGGCCCCAAAAAAGGTGGATTTGGATGGATTACCTCATTTTGAGAAGAACTTCTACATTGAGGCATCATCAGTGGCGGAAATGACAGAGAGAGAGGTTGAGGAGTATCGAACAAGGAGGGAAATCACTGTAGAAGGTCGCGATGTTCCAAAACCAGTCAAGTCTTTCCGTGATGTTGGATTTCCCGATTATGTCATGCAAGAAATTGCCAAAGCTGGCTTCACTGAACCTACTCCTATTCAGTCCCAAGGATGGCCAATGGCACTTAAAGGTCGAGATCTCATTGGTATTGCAGAAACGGGGTCAGGGAAAACACTTGCATACCTTTTGCCTGCAATTGTCCATGTCAATGCCCAGCCAATCCTTTCTCCTGGAGATGGTCCAATTGTGTTAGTTCTAGCTCCTACTCGTGAACTTGCAGTTCAAATTCAACAAGAAGCTACAAAATTTGGTGCATCTTCGAAGATTAAGAACACATGCATATATGGTGGTGTTCCCAAAGGACCTCAAGTGCGTGATCTTCAGAAAGGAGTTGAAATTGTAATTGCTACACCGGGAAGATTGATTGATATGATGGAGTCACATCATACAAACTTACGAAGGGTTACTTACCTTGTACTGGATGAGGCTGATCGGATGCTAGATATGGGATTTGACCCTCAAATACGGAAAATTGTTTCACAGGTCATCATTGGTTCTCCAGACCTGAAAGCTAATCATGCCATACGCCAACATGTTGATATCGTCTCTGAAAATCAGAAATATAACAAATTGGTGAAATTGCTGGAGGATATAATGGATGGGAGTCGAATCCTGATCTTTATGGATACCAAGAAAGGCTGTGATCAAATTACCCGACAGCTTCGCATGGATGGTTGGCCTGCACTTTCAATTCATGGTGATAAGAGTCAAGCAGAAAGGGATTGGGTCCTCTCAGAATTTAGGTCTGGCAAGAGCCCTATAATGACGGCTACAGATGTTGCTGCTCATGTAAAGGACGTAAAATATGTAATAAATTACGATTTTCCTGGATCTCTTGAGGATTATGTACATCGAATTGGTCGAACAGGAAGAGCTGGAGCAAAAGGAACTGCATACACTTTCTTCACCGCTGCTAATGCAAGATTTGCTAAAGAACTCATAGCGATTCTTGAAGAAGCTGGACAGAAGGTTAGTCCTGAACTGGCAGCAATGGGTCGTGGTGCGCCTCCTCCTCCCTCAGGTCATGGGGGGTTCCGAGATCGTGGAAGGGGTTTTGGTGGTGGCCGATCATGGAGTTGATTATCAAACTTGATGACGTCAGACAATTATTAGTGTCCTGCAGTCACTGTGTTGCCATTGCAAAAGTGGGTATGCTGAATACTACCACTTAACCCTTTGAACAGATCCATCTACTCTACTTTTACCAACACATGACAGGCAGGTGAAAGTTTGGGATTTTGATGTACAAGAAAGAGTTCCATTTTTTTTTTCCCTAGAAGAAAAATGTTAAAGTCAACGTGTATTTAGTAGACAAATTGTTCAAACATGCTGCATTACTGTATTTATGATCTTTTCTATTGTGTTGGAAAGTAAACCTCTTCATTATTTCTCAACAATATTTTTGAAGTATATGAACTAGAATGAAGTATA

Coding sequence (CDS)

ATGAGTCGCTACGACAGCCGCACCTCCGATCCCACTTCTTACCGCGACCGTAGAAGTGATTCAGGTTTTGGTGGGTCTACAGGCTATGGCAATTCAGTGCGATCCTCCTCTAGCAAGAGTGACTATCATGCTTCTGAGGCCCCAAAAAAGGTGGATTTGGATGGATTACCTCATTTTGAGAAGAACTTCTACATTGAGGCATCATCAGTGGCGGAAATGACAGAGAGAGAGGTTGAGGAGTATCGAACAAGGAGGGAAATCACTGTAGAAGGTCGCGATGTTCCAAAACCAGTCAAGTCTTTCCGTGATGTTGGATTTCCCGATTATGTCATGCAAGAAATTGCCAAAGCTGGCTTCACTGAACCTACTCCTATTCAGTCCCAAGGATGGCCAATGGCACTTAAAGGTCGAGATCTCATTGGTATTGCAGAAACGGGGTCAGGGAAAACACTTGCATACCTTTTGCCTGCAATTGTCCATGTCAATGCCCAGCCAATCCTTTCTCCTGGAGATGGTCCAATTGTGTTAGTTCTAGCTCCTACTCGTGAACTTGCAGTTCAAATTCAACAAGAAGCTACAAAATTTGGTGCATCTTCGAAGATTAAGAACACATGCATATATGGTGGTGTTCCCAAAGGACCTCAAGTGCGTGATCTTCAGAAAGGAGTTGAAATTGTAATTGCTACACCGGGAAGATTGATTGATATGATGGAGTCACATCATACAAACTTACGAAGGGTTACTTACCTTGTACTGGATGAGGCTGATCGGATGCTAGATATGGGATTTGACCCTCAAATACGGAAAATTGTTTCACAGGTCATCATTGGTTCTCCAGACCTGAAAGCTAATCATGCCATACGCCAACATGTTGATATCGTCTCTGAAAATCAGAAATATAACAAATTGGTGAAATTGCTGGAGGATATAATGGATGGGAGTCGAATCCTGATCTTTATGGATACCAAGAAAGGCTGTGATCAAATTACCCGACAGCTTCGCATGGATGGTTGGCCTGCACTTTCAATTCATGGTGATAAGAGTCAAGCAGAAAGGGATTGGGTCCTCTCAGAATTTAGGTCTGGCAAGAGCCCTATAATGACGGCTACAGATGTTGCTGCTCATGTAAAGGACGTAAAATATGTAATAAATTACGATTTTCCTGGATCTCTTGAGGATTATGTACATCGAATTGGTCGAACAGGAAGAGCTGGAGCAAAAGGAACTGCATACACTTTCTTCACCGCTGCTAATGCAAGATTTGCTAAAGAACTCATAGCGATTCTTGAAGAAGCTGGACAGAAGGTTAGTCCTGAACTGGCAGCAATGGGTCGTGGTGCGCCTCCTCCTCCCTCAGGTCATGGGGGGTTCCGAGATCGTGGAAGGGGTTTTGGTGGTGGCCGATCATGGAGTTGA

Protein sequence

MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFEKNFYIEASSVAEMTEREVEEYRTRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFTEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAAHVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGRGFGGGRSWS

Homology

[Close]

BLAST of Cp4.1LG02g14170 vs. ExPASy Swiss-Prot
Match: Q9C718 (DEAD-box ATP-dependent RNA helicase 20 OS=Arabidopsis thaliana OX=3702 GN=RH20 PE=2 SV=1)

HSP 1 Score: 769.6 bits (1986), Expect = 2.0e-221
Identity = 399/505 (79.01%), Postives = 432/505 (85.54%), Query Frame = 0


Query: 1   MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE 60
           MSRYDSRT D TSYRDRRSDSGFGG++ YG+S   +SSK D   +E+P+K+DLDGL  FE
Sbjct: 1   MSRYDSRTGDSTSYRDRRSDSGFGGTSSYGSSGSHTSSKKDNDGNESPRKLDLDGLTPFE 60

Query: 61  KNFYIEASSVAEMTEREVEEYRTRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120
           KNFY+E+ +VA MT+ EVEEYR  REITVEG+D+PKPVKSFRDVGFPDYV++E+ KAGFT
Sbjct: 61  KNFYVESPAVAAMTDTEVEEYRKLREITVEGKDIPKPVKSFRDVGFPDYVLEEVKKAGFT 120

Query: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180
           EPTPIQSQGWPMA+KGRDLIGIAETGSGKTL+YLLPAIVHVNAQP+L+ GDGPIVLVLAP
Sbjct: 121 EPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIVHVNAQPMLAHGDGPIVLVLAP 180

Query: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240
           TRELAVQIQQEA+KFG+SSKIK TCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMES+
Sbjct: 181 TRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESN 240

Query: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVS---------------------------- 300
           +TNLRRVTYLVLDEADRMLDMGFDPQIRKIVS                            
Sbjct: 241 NTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHIRPDRQTLYWSATWPKEVEQLSKKFLY 300

Query: 301 ---QVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQI 360
              +VIIGS DLKAN AIRQ VD++SE+QKYNKLVKLLEDIMDGSRIL+F+DTKKGCDQI
Sbjct: 301 NPYKVIIGSSDLKANRAIRQIVDVISESQKYNKLVKLLEDIMDGSRILVFLDTKKGCDQI 360

Query: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAAH---VKDVKYVINYD 420
           TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAA    VKDVKYVINYD
Sbjct: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420

Query: 421 FPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIAILEEAGQKVSPELAAMGRG 472
           FPGSLEDYVHRIGRTGRAGAKGTAYTFFT ANARFAKEL  IL+EAGQKVSPELA+MGR 
Sbjct: 421 FPGSLEDYVHRIGRTGRAGAKGTAYTFFTVANARFAKELTNILQEAGQKVSPELASMGRS 480

[Close]

BLAST of Cp4.1LG02g14170 vs. ExPASy Swiss-Prot
Match: Q5QMN3 (DEAD-box ATP-dependent RNA helicase 20 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0197200 PE=3 SV=2)

HSP 1 Score: 768.8 bits (1984), Expect = 3.4e-221
Identity = 405/505 (80.20%), Postives = 430/505 (85.15%), Query Frame = 0


Query: 1   MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE 60
           MSR+D R +DP SYRDRRS+  FGG    G    + +SK+D  A+ A    DLDGLP FE
Sbjct: 1   MSRFDGRAADPGSYRDRRSEGAFGG----GTRAFAPTSKADSAAAAA----DLDGLPRFE 60

Query: 61  KNFYIEASSVAEMTEREVEEYRTRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120
           KNFY+E+ SVA MTE EVE YR RREITVEGRDVPKPV+ FRDVGFP+YV+QEI KAGF 
Sbjct: 61  KNFYVESPSVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVLQEITKAGFV 120

Query: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180
           EPTPIQSQGWPMAL+GRDLIGIAETGSGKTLAYLLPAIVHVNAQPIL+PGDGPIVLVLAP
Sbjct: 121 EPTPIQSQGWPMALRGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAP 180

Query: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240
           TRELAVQIQQEATKFGASSKIK+TCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM+ESH
Sbjct: 181 TRELAVQIQQEATKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMIESH 240

Query: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQ--------------------------- 300
           HTNLRRVTYLVLDEADRMLDMGF+PQI+KIVSQ                           
Sbjct: 241 HTNLRRVTYLVLDEADRMLDMGFEPQIKKIVSQIRPDRQTLYWSATWPKEVEQLARNFLF 300

Query: 301 ----VIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQI 360
               VIIGS +LKANHAI QHV+I+SE+QKYNKLV LLEDIMDGSRILIFMDTKKGCDQI
Sbjct: 301 DPYKVIIGSEELKANHAISQHVEILSESQKYNKLVNLLEDIMDGSRILIFMDTKKGCDQI 360

Query: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAAH---VKDVKYVINYD 420
           TRQLRMDGWPALSIHGDKSQAERDWVLSEF+SGKSPIMTATDVAA    VKDVKYVINYD
Sbjct: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYD 420

Query: 421 FPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIAILEEAGQKVSPELAAMGRG 472
           FPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAK+LI ILEEAGQKVSPELA MGRG
Sbjct: 421 FPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKDLINILEEAGQKVSPELANMGRG 480

[Close]

BLAST of Cp4.1LG02g14170 vs. ExPASy Swiss-Prot
Match: Q8W4R3 (DEAD-box ATP-dependent RNA helicase 30 OS=Arabidopsis thaliana OX=3702 GN=RH30 PE=1 SV=2)

HSP 1 Score: 594.0 bits (1530), Expect = 1.5e-168
Identity = 310/491 (63.14%), Postives = 374/491 (76.17%), Query Frame = 0


Query: 14  YRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFEKNFYIEASSVAEM 73
           Y DR     +GG  G     R  SSK +  +   PK+ +   L HFEKNFY+E+ +V  M
Sbjct: 86  YGDRNGGGNWGGGGG-----RGGSSKRELDSVSLPKQ-NFGNLVHFEKNFYVESPTVQAM 145

Query: 74  TEREVEEYRTRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFTEPTPIQSQGWPMA 133
           TE++V  YRT R+I+VEGRDVPKP+K F+D  FPD +++ IAK GFTEPTPIQ+QGWPMA
Sbjct: 146 TEQDVAMYRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMA 205

Query: 134 LKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEAT 193
           LKGRDLIGIAETGSGKTLAYLLPA+VHV+AQP L   DGPIVL+LAPTRELAVQIQ+E+ 
Sbjct: 206 LKGRDLIGIAETGSGKTLAYLLPALVHVSAQPRLGQDDGPIVLILAPTRELAVQIQEESR 265

Query: 194 KFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLD 253
           KFG  S +++TCIYGG PKGPQ+RDL++GVEIVIATPGRLIDM+E  HTNL+RVTYLVLD
Sbjct: 266 KFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNLKRVTYLVLD 325

Query: 254 EADRMLDMGFDPQIRKIVSQV-------------------------------IIGSPDLK 313
           EADRMLDMGF+PQIRKIVSQ+                               IIGS DLK
Sbjct: 326 EADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLARQFLRDPYKAIIGSTDLK 385

Query: 314 ANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALS 373
           AN +I Q ++IV   +KYN+L+ LL+ +MDGS+ILIF++TK+GCDQ+TRQLRMDGWPAL+
Sbjct: 386 ANQSINQVIEIVPTPEKYNRLLTLLKQLMDGSKILIFVETKRGCDQVTRQLRMDGWPALA 445

Query: 374 IHGDKSQAERDWVLSEFRSGKSPIMTATDVAAH---VKDVKYVINYDFPGSLEDYVHRIG 433
           IHGDK+Q+ERD VL+EF+SG+SPIMTATDVAA    VKD+K V+NYDFP +LEDY+HRIG
Sbjct: 446 IHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIG 505

Query: 434 RTGRAGAKGTAYTFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGG--- 468
           RTGRAGAKG A+TFFT  NA+FA+EL+ IL+EAGQ V P L+A+ R +     G GG   
Sbjct: 506 RTGRAGAKGMAFTFFTHDNAKFARELVKILQEAGQVVPPTLSALVRSSGSGYGGSGGGRN 565

[Close]

BLAST of Cp4.1LG02g14170 vs. ExPASy Swiss-Prot
Match: Q5N7W4 (DEAD-box ATP-dependent RNA helicase 30 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0911100 PE=2 SV=2)

HSP 1 Score: 592.8 bits (1527), Expect = 3.4e-168
Identity = 308/488 (63.11%), Postives = 368/488 (75.41%), Query Frame = 0


Query: 18  RSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFEKNFYIEASSVAEMTERE 77
           R   G GG+ GY         +    +   PK  D   L  FEKNFY+E  +V  M++ +
Sbjct: 171 RGGGGGGGAGGYRGGGGRGGGRDALDSLSLPKP-DFRSLIPFEKNFYVECPAVQAMSDMD 230

Query: 78  VEEYRTRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFTEPTPIQSQGWPMALKGR 137
           V +YR +R+ITVEG DVPKPV+ F++  FPDY MQ IAK+GF EPTPIQSQGWPMALKGR
Sbjct: 231 VSQYRRQRDITVEGHDVPKPVRYFQEANFPDYCMQAIAKSGFVEPTPIQSQGWPMALKGR 290

Query: 138 DLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEATKFGA 197
           D+IGIA+TGSGKTL+YLLP +VHV AQP L  GDGPIVL+LAPTRELAVQIQQE+ KFG+
Sbjct: 291 DMIGIAQTGSGKTLSYLLPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQQESGKFGS 350

Query: 198 SSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEADR 257
            S+ ++TCIYGG PKGPQ+RDL++GVEIVIATPGRLIDM+E  HTNLRRVTYLVLDEADR
Sbjct: 351 YSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEGGHTNLRRVTYLVLDEADR 410

Query: 258 MLDMGFDPQIRKIVSQ-------------------------------VIIGSPDLKANHA 317
           MLDMGF+PQIRKIV+Q                               VIIGSPDLKANH+
Sbjct: 411 MLDMGFEPQIRKIVAQIRPDRQTLYWSATWPREVESLARQFLQNPYKVIIGSPDLKANHS 470

Query: 318 IRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGD 377
           I+Q ++++SE++KY +L KLL D+MDGSRILIF  TKK CD++TRQLRMDGWPALSIHGD
Sbjct: 471 IQQIIEVISEHEKYPRLSKLLSDLMDGSRILIFFQTKKDCDKVTRQLRMDGWPALSIHGD 530

Query: 378 KSQAERDWVLSEFRSGKSPIMTATDVAAH---VKDVKYVINYDFPGSLEDYVHRIGRTGR 437
           K+QAERD+VL+EF+SGKSPIM ATDVAA    VKD+K VIN+DFP +LEDY+HRIGRTGR
Sbjct: 531 KAQAERDYVLAEFKSGKSPIMAATDVAARGLDVKDIKCVINFDFPTTLEDYIHRIGRTGR 590

Query: 438 AGAKGTAYTFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGRG 472
           AGA GTA+TFFT +NA+F++ L+ IL EAGQ V+P L +M + A     G G FR RGRG
Sbjct: 591 AGASGTAFTFFTLSNAKFSRNLVKILREAGQVVNPALESMAKSA--SSMGGGNFRSRGRG 650

[Close]

BLAST of Cp4.1LG02g14170 vs. ExPASy Swiss-Prot
Match: Q4X195 (ATP-dependent RNA helicase dbp2 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=dbp2 PE=3 SV=2)

HSP 1 Score: 543.9 bits (1400), Expect = 1.8e-153
Identity = 288/485 (59.38%), Postives = 352/485 (72.58%), Query Frame = 0


Query: 22  GFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFEKNFYIEASSVAEMTEREVEEY 81
           G+GG  G G         S+  A    +  DLD LP FEK+FY E   VA  +EREVEE+
Sbjct: 44  GYGGGYGRGGGAAGGDRMSNLGAGLKKQDWDLDSLPKFEKSFYKEHPDVAARSEREVEEF 103

Query: 82  RTRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFTEPTPIQSQGWPMALKGRDLIG 141
           R + E+TV+GR+VP+PV++F + GFP YV+ E+   GF  PT IQSQGWPMAL GRD++G
Sbjct: 104 RKKHEMTVQGRNVPRPVENFDEAGFPQYVLSEVKAQGFERPTAIQSQGWPMALSGRDVVG 163

Query: 142 IAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEATKFGASSKI 201
           IAETGSGKTL Y LPAIVH+NAQP+L+PGDGPIVL+LAPTRELAVQIQ E +KFG SS+I
Sbjct: 164 IAETGSGKTLTYCLPAIVHINAQPLLAPGDGPIVLILAPTRELAVQIQAEISKFGKSSRI 223

Query: 202 KNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEADRMLDM 261
           +NTC+YGGVPKGPQ+RDL +GVE+ IATPGRLIDM+E+  TNLRRVTYLVLDEADRMLDM
Sbjct: 224 RNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDM 283

Query: 262 GFDPQIRKIVS-------------------------------QVIIGSPDLKANHAIRQH 321
           GF+PQIRKIVS                               QV IGS DL ANH I Q 
Sbjct: 284 GFEPQIRKIVSQIRPDRQTCMWSATWPKEVRQLATDFLNDYIQVNIGSMDLSANHRITQI 343

Query: 322 VDIVSENQKYNKLVKLLEDIMD--GSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKS 381
           V++VS+ +K +K++K LE IM+   ++ LIF  TK+  D+ITR LR DGWPALSIHGDK 
Sbjct: 344 VEVVSDFEKRDKMIKHLEKIMENRSNKCLIFTGTKRIADEITRFLRQDGWPALSIHGDKQ 403

Query: 382 QAERDWVLSEFRSGKSPIMTATDVAAH---VKDVKYVINYDFPGSLEDYVHRIGRTGRAG 441
           Q ERDWVL+EF++GKSPIM ATDVA+    V+D+ +V+NYD+P + EDY+HRIGRTGRAG
Sbjct: 404 QQERDWVLNEFKTGKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYIHRIGRTGRAG 463

Query: 442 AKGTAYTFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGF-RDRGR-G 469
           AKGTA TFFT  N++ A++L+ IL EA Q++ P LA M R +     GHGG+ R  GR G
Sbjct: 464 AKGTAITFFTTENSKQARDLVTILTEAKQQIDPRLAEMARYS-GGGGGHGGYGRWGGRGG 523

[Close]

BLAST of Cp4.1LG02g14170 vs. NCBI nr
Match: XP_023525778.1 (DEAD-box ATP-dependent RNA helicase 20 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 906 bits (2342), Expect = 0.0
Identity = 470/505 (93.07%), Postives = 470/505 (93.07%), Query Frame = 0


Query: 1   MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE 60
           MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE
Sbjct: 1   MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE 60

Query: 61  KNFYIEASSVAEMTEREVEEYRTRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120
           KNFYIEASSVAEMTEREVEEYRTRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT
Sbjct: 61  KNFYIEASSVAEMTEREVEEYRTRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120

Query: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180
           EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP
Sbjct: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180

Query: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240
           TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH
Sbjct: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240

Query: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQ--------------------------- 300
           HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQ                           
Sbjct: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLY 300

Query: 301 ----VIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQI 360
               VIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQI
Sbjct: 301 NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQI 360

Query: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAAH---VKDVKYVINYD 420
           TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAA    VKDVKYVINYD
Sbjct: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420

Query: 421 FPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIAILEEAGQKVSPELAAMGRG 471
           FPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIAILEEAGQKVSPELAAMGRG
Sbjct: 421 FPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIAILEEAGQKVSPELAAMGRG 480

[Close]

BLAST of Cp4.1LG02g14170 vs. NCBI nr
Match: XP_022949583.1 (DEAD-box ATP-dependent RNA helicase 20-like isoform X1 [Cucurbita moschata] >KAG7036436.1 DEAD-box ATP-dependent RNA helicase 20 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 898 bits (2321), Expect = 0.0
Identity = 465/505 (92.08%), Postives = 467/505 (92.48%), Query Frame = 0


Query: 1   MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE 60
           MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE
Sbjct: 1   MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE 60

Query: 61  KNFYIEASSVAEMTEREVEEYRTRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120
           KNFYIEASSV EMT+REVEEYR RREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT
Sbjct: 61  KNFYIEASSVVEMTDREVEEYRKRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120

Query: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180
           EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP
Sbjct: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180

Query: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240
           TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH
Sbjct: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240

Query: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQ--------------------------- 300
           HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQ                           
Sbjct: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLY 300

Query: 301 ----VIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQI 360
               VIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQ 
Sbjct: 301 NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQT 360

Query: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAAH---VKDVKYVINYD 420
           TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAA    VKDVKYVINYD
Sbjct: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420

Query: 421 FPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIAILEEAGQKVSPELAAMGRG 471
           FPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKE+IAILEEAGQKVSPELAAMGRG
Sbjct: 421 FPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKEVIAILEEAGQKVSPELAAMGRG 480

[Close]

BLAST of Cp4.1LG02g14170 vs. NCBI nr
Match: KAG6606721.1 (DEAD-box ATP-dependent RNA helicase 20, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 894 bits (2311), Expect = 0.0
Identity = 463/505 (91.68%), Postives = 466/505 (92.28%), Query Frame = 0


Query: 1   MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE 60
           MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE
Sbjct: 1   MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE 60

Query: 61  KNFYIEASSVAEMTEREVEEYRTRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120
           KNFYIEASSV EMT+REVEEYR RREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT
Sbjct: 61  KNFYIEASSVVEMTDREVEEYRKRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120

Query: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180
           EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP
Sbjct: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180

Query: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240
           TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH
Sbjct: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240

Query: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQ--------------------------- 300
           HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQ                           
Sbjct: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLY 300

Query: 301 ----VIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQI 360
               VIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMD KKGCDQ 
Sbjct: 301 NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDIKKGCDQT 360

Query: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAAH---VKDVKYVINYD 420
           TRQLRMDGWPALSIHGDKS+AERDWVLSEFRSGKSPIMTATDVAA    VKDVKYVINYD
Sbjct: 361 TRQLRMDGWPALSIHGDKSRAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420

Query: 421 FPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIAILEEAGQKVSPELAAMGRG 471
           FPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKE+IAILEEAGQKVSPELAAMGRG
Sbjct: 421 FPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKEVIAILEEAGQKVSPELAAMGRG 480

[Close]

BLAST of Cp4.1LG02g14170 vs. NCBI nr
Match: XP_038903955.1 (DEAD-box ATP-dependent RNA helicase 20 [Benincasa hispida])

HSP 1 Score: 888 bits (2294), Expect = 0.0
Identity = 460/505 (91.09%), Postives = 465/505 (92.08%), Query Frame = 0


Query: 1   MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE 60
           MSRYDSR+SDPTSYRDRRSDSGFGGSTGY +SVRSSSSK+DY+ASE PKKVDLDGLPHFE
Sbjct: 1   MSRYDSRSSDPTSYRDRRSDSGFGGSTGYSSSVRSSSSKNDYYASEGPKKVDLDGLPHFE 60

Query: 61  KNFYIEASSVAEMTEREVEEYRTRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120
           KNFYIEA SVA MTEREVEEYR RREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT
Sbjct: 61  KNFYIEAPSVAAMTEREVEEYRQRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120

Query: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180
           EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP
Sbjct: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180

Query: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240
           TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH
Sbjct: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240

Query: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQ--------------------------- 300
           HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQ                           
Sbjct: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLY 300

Query: 301 ----VIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQI 360
               VIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQI
Sbjct: 301 NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQI 360

Query: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAAH---VKDVKYVINYD 420
           TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAA    VKDVKYVINYD
Sbjct: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420

Query: 421 FPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIAILEEAGQKVSPELAAMGRG 471
           FPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIAILEEAGQKVSPELAAMGRG
Sbjct: 421 FPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIAILEEAGQKVSPELAAMGRG 480

[Close]

BLAST of Cp4.1LG02g14170 vs. NCBI nr
Match: XP_004146825.1 (DEAD-box ATP-dependent RNA helicase 20 [Cucumis sativus] >KGN59824.1 hypothetical protein Csa_002637 [Cucumis sativus])

HSP 1 Score: 887 bits (2291), Expect = 0.0
Identity = 458/505 (90.69%), Postives = 464/505 (91.88%), Query Frame = 0


Query: 1   MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE 60
           MSRYDSR+SDPTSYRDRRSDSG+GGSTGYG SVRSSSSKSDY+ SEAPKK+DLDGLPHFE
Sbjct: 1   MSRYDSRSSDPTSYRDRRSDSGYGGSTGYGGSVRSSSSKSDYYGSEAPKKLDLDGLPHFE 60

Query: 61  KNFYIEASSVAEMTEREVEEYRTRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120
           KNFYIEA SVA MTEREVEEYR RREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT
Sbjct: 61  KNFYIEAPSVAAMTEREVEEYRQRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120

Query: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180
           EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP
Sbjct: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180

Query: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240
           TRELAVQIQQEATKFGASSKIKNTC+YGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH
Sbjct: 181 TRELAVQIQQEATKFGASSKIKNTCVYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240

Query: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQ--------------------------- 300
           HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQ                           
Sbjct: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLY 300

Query: 301 ----VIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQI 360
               VIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQI
Sbjct: 301 NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQI 360

Query: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAAH---VKDVKYVINYD 420
           TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAA    VKDVKYVINYD
Sbjct: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420

Query: 421 FPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIAILEEAGQKVSPELAAMGRG 471
           FPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELI ILEEAGQKVSPELAAMGRG
Sbjct: 421 FPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIGILEEAGQKVSPELAAMGRG 480

[Close]

BLAST of Cp4.1LG02g14170 vs. ExPASy TrEMBL
Match: A0A6J1GCG9 (DEAD-box ATP-dependent RNA helicase 20-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452894 PE=3 SV=1)

HSP 1 Score: 898 bits (2321), Expect = 0.0
Identity = 465/505 (92.08%), Postives = 467/505 (92.48%), Query Frame = 0


Query: 1   MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE 60
           MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE
Sbjct: 1   MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE 60

Query: 61  KNFYIEASSVAEMTEREVEEYRTRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120
           KNFYIEASSV EMT+REVEEYR RREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT
Sbjct: 61  KNFYIEASSVVEMTDREVEEYRKRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120

Query: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180
           EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP
Sbjct: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180

Query: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240
           TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH
Sbjct: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240

Query: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQ--------------------------- 300
           HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQ                           
Sbjct: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLY 300

Query: 301 ----VIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQI 360
               VIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQ 
Sbjct: 301 NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQT 360

Query: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAAH---VKDVKYVINYD 420
           TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAA    VKDVKYVINYD
Sbjct: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420

Query: 421 FPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIAILEEAGQKVSPELAAMGRG 471
           FPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKE+IAILEEAGQKVSPELAAMGRG
Sbjct: 421 FPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKEVIAILEEAGQKVSPELAAMGRG 480

[Close]

BLAST of Cp4.1LG02g14170 vs. ExPASy TrEMBL
Match: A0A0A0LFT6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G848820 PE=3 SV=1)

HSP 1 Score: 887 bits (2291), Expect = 0.0
Identity = 458/505 (90.69%), Postives = 464/505 (91.88%), Query Frame = 0


Query: 1   MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE 60
           MSRYDSR+SDPTSYRDRRSDSG+GGSTGYG SVRSSSSKSDY+ SEAPKK+DLDGLPHFE
Sbjct: 1   MSRYDSRSSDPTSYRDRRSDSGYGGSTGYGGSVRSSSSKSDYYGSEAPKKLDLDGLPHFE 60

Query: 61  KNFYIEASSVAEMTEREVEEYRTRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120
           KNFYIEA SVA MTEREVEEYR RREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT
Sbjct: 61  KNFYIEAPSVAAMTEREVEEYRQRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120

Query: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180
           EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP
Sbjct: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180

Query: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240
           TRELAVQIQQEATKFGASSKIKNTC+YGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH
Sbjct: 181 TRELAVQIQQEATKFGASSKIKNTCVYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240

Query: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQ--------------------------- 300
           HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQ                           
Sbjct: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLY 300

Query: 301 ----VIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQI 360
               VIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQI
Sbjct: 301 NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQI 360

Query: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAAH---VKDVKYVINYD 420
           TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAA    VKDVKYVINYD
Sbjct: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420

Query: 421 FPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIAILEEAGQKVSPELAAMGRG 471
           FPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELI ILEEAGQKVSPELAAMGRG
Sbjct: 421 FPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIGILEEAGQKVSPELAAMGRG 480

[Close]

BLAST of Cp4.1LG02g14170 vs. ExPASy TrEMBL
Match: A0A6J1KAT4 (LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase 20-like OS=Cucurbita maxima OX=3661 GN=LOC111492616 PE=3 SV=1)

HSP 1 Score: 884 bits (2285), Expect = 0.0
Identity = 461/505 (91.29%), Postives = 463/505 (91.68%), Query Frame = 0


Query: 1   MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE 60
           MSRYDSR+SDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDY+ SEAPKKVDLDGLPHFE
Sbjct: 1   MSRYDSRSSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYYGSEAPKKVDLDGLPHFE 60

Query: 61  KNFYIEASSVAEMTEREVEEYRTRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120
           KNFYIEASSVAEMTEREVEEYR RREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT
Sbjct: 61  KNFYIEASSVAEMTEREVEEYRKRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120

Query: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180
           EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP
Sbjct: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180

Query: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240
           TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH
Sbjct: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240

Query: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQ--------------------------- 300
           HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQ                           
Sbjct: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLY 300

Query: 301 ----VIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQI 360
               VIIGS DLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKG DQI
Sbjct: 301 NPYKVIIGSSDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGSDQI 360

Query: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAAH---VKDVKYVINYD 420
           TRQLRMDGWPALS HGD SQAERDWVLSEFRSGKSPIMTATDVAA    VKDVKYVINYD
Sbjct: 361 TRQLRMDGWPALSSHGDXSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420

Query: 421 FPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIAILEEAGQKVSPELAAMGRG 471
           FPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAK LIAILEEAGQKVSPELAAMGRG
Sbjct: 421 FPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKGLIAILEEAGQKVSPELAAMGRG 480

[Close]

BLAST of Cp4.1LG02g14170 vs. ExPASy TrEMBL
Match: A0A1S3BHT9 (DEAD-box ATP-dependent RNA helicase 20 OS=Cucumis melo OX=3656 GN=LOC103490017 PE=3 SV=1)

HSP 1 Score: 882 bits (2278), Expect = 0.0
Identity = 457/505 (90.50%), Postives = 462/505 (91.49%), Query Frame = 0


Query: 1   MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE 60
           MSRYDSR+SDPTSYRDRRSDSG+GGSTGY  SVRSSSSK+DY+ SEA KKVDLDGLPHFE
Sbjct: 1   MSRYDSRSSDPTSYRDRRSDSGYGGSTGYSGSVRSSSSKNDYYGSEASKKVDLDGLPHFE 60

Query: 61  KNFYIEASSVAEMTEREVEEYRTRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120
           KNFYIEA SVA MTEREVEEYR RREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT
Sbjct: 61  KNFYIEAPSVAAMTEREVEEYRQRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120

Query: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180
           EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP
Sbjct: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180

Query: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240
           TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH
Sbjct: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240

Query: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQ--------------------------- 300
           HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQ                           
Sbjct: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLY 300

Query: 301 ----VIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQI 360
               VIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQI
Sbjct: 301 NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQI 360

Query: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAAH---VKDVKYVINYD 420
           TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAA    VKDVKYVINYD
Sbjct: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420

Query: 421 FPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIAILEEAGQKVSPELAAMGRG 471
           FPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELI ILEEAGQKVSPELAAMGRG
Sbjct: 421 FPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIGILEEAGQKVSPELAAMGRG 480

[Close]

BLAST of Cp4.1LG02g14170 vs. ExPASy TrEMBL
Match: A0A6J1D4P2 (DEAD-box ATP-dependent RNA helicase 20 OS=Momordica charantia OX=3673 GN=LOC111016931 PE=3 SV=1)

HSP 1 Score: 878 bits (2269), Expect = 0.0
Identity = 454/505 (89.90%), Postives = 462/505 (91.49%), Query Frame = 0


Query: 1   MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE 60
           MSRYD R+SDPTSYRDRRSDSGFGGSTGY +SVRSSSSKSDY+ASEAP+KVDLDGLP FE
Sbjct: 1   MSRYDGRSSDPTSYRDRRSDSGFGGSTGYSSSVRSSSSKSDYYASEAPRKVDLDGLPPFE 60

Query: 61  KNFYIEASSVAEMTEREVEEYRTRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120
           KNFY+EA SVA MTEREVEEYR RREIT+EGRDVPKPVKSFRDVGFPDYVMQEIAKAGF 
Sbjct: 61  KNFYVEAPSVAAMTEREVEEYRQRREITIEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFA 120

Query: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180
           EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP
Sbjct: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180

Query: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240
           TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH
Sbjct: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240

Query: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQ--------------------------- 300
           HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQ                           
Sbjct: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLY 300

Query: 301 ----VIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQI 360
               VIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQI
Sbjct: 301 NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQI 360

Query: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAAH---VKDVKYVINYD 420
           TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAA    VKDVKYVINYD
Sbjct: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420

Query: 421 FPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIAILEEAGQKVSPELAAMGRG 471
           FPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELI+ILEEAGQKVSPELAAMGRG
Sbjct: 421 FPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELISILEEAGQKVSPELAAMGRG 480

[Close]

BLAST of Cp4.1LG02g14170 vs. TAIR 10
Match: AT1G55150.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 769.6 bits (1986), Expect = 1.4e-222
Identity = 399/505 (79.01%), Postives = 432/505 (85.54%), Query Frame = 0


Query: 1   MSRYDSRTSDPTSYRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFE 60
           MSRYDSRT D TSYRDRRSDSGFGG++ YG+S   +SSK D   +E+P+K+DLDGL  FE
Sbjct: 1   MSRYDSRTGDSTSYRDRRSDSGFGGTSSYGSSGSHTSSKKDNDGNESPRKLDLDGLTPFE 60

Query: 61  KNFYIEASSVAEMTEREVEEYRTRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT 120
           KNFY+E+ +VA MT+ EVEEYR  REITVEG+D+PKPVKSFRDVGFPDYV++E+ KAGFT
Sbjct: 61  KNFYVESPAVAAMTDTEVEEYRKLREITVEGKDIPKPVKSFRDVGFPDYVLEEVKKAGFT 120

Query: 121 EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP 180
           EPTPIQSQGWPMA+KGRDLIGIAETGSGKTL+YLLPAIVHVNAQP+L+ GDGPIVLVLAP
Sbjct: 121 EPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIVHVNAQPMLAHGDGPIVLVLAP 180

Query: 181 TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 240
           TRELAVQIQQEA+KFG+SSKIK TCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMES+
Sbjct: 181 TRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESN 240

Query: 241 HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVS---------------------------- 300
           +TNLRRVTYLVLDEADRMLDMGFDPQIRKIVS                            
Sbjct: 241 NTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHIRPDRQTLYWSATWPKEVEQLSKKFLY 300

Query: 301 ---QVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQI 360
              +VIIGS DLKAN AIRQ VD++SE+QKYNKLVKLLEDIMDGSRIL+F+DTKKGCDQI
Sbjct: 301 NPYKVIIGSSDLKANRAIRQIVDVISESQKYNKLVKLLEDIMDGSRILVFLDTKKGCDQI 360

Query: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAAH---VKDVKYVINYD 420
           TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAA    VKDVKYVINYD
Sbjct: 361 TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD 420

Query: 421 FPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIAILEEAGQKVSPELAAMGRG 472
           FPGSLEDYVHRIGRTGRAGAKGTAYTFFT ANARFAKEL  IL+EAGQKVSPELA+MGR 
Sbjct: 421 FPGSLEDYVHRIGRTGRAGAKGTAYTFFTVANARFAKELTNILQEAGQKVSPELASMGRS 480

[Close]

BLAST of Cp4.1LG02g14170 vs. TAIR 10
Match: AT5G63120.2 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 594.0 bits (1530), Expect = 1.1e-169
Identity = 310/491 (63.14%), Postives = 374/491 (76.17%), Query Frame = 0


Query: 14  YRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFEKNFYIEASSVAEM 73
           Y DR     +GG  G     R  SSK +  +   PK+ +   L HFEKNFY+E+ +V  M
Sbjct: 86  YGDRNGGGNWGGGGG-----RGGSSKRELDSVSLPKQ-NFGNLVHFEKNFYVESPTVQAM 145

Query: 74  TEREVEEYRTRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFTEPTPIQSQGWPMA 133
           TE++V  YRT R+I+VEGRDVPKP+K F+D  FPD +++ IAK GFTEPTPIQ+QGWPMA
Sbjct: 146 TEQDVAMYRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMA 205

Query: 134 LKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEAT 193
           LKGRDLIGIAETGSGKTLAYLLPA+VHV+AQP L   DGPIVL+LAPTRELAVQIQ+E+ 
Sbjct: 206 LKGRDLIGIAETGSGKTLAYLLPALVHVSAQPRLGQDDGPIVLILAPTRELAVQIQEESR 265

Query: 194 KFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLD 253
           KFG  S +++TCIYGG PKGPQ+RDL++GVEIVIATPGRLIDM+E  HTNL+RVTYLVLD
Sbjct: 266 KFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNLKRVTYLVLD 325

Query: 254 EADRMLDMGFDPQIRKIVSQV-------------------------------IIGSPDLK 313
           EADRMLDMGF+PQIRKIVSQ+                               IIGS DLK
Sbjct: 326 EADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLARQFLRDPYKAIIGSTDLK 385

Query: 314 ANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALS 373
           AN +I Q ++IV   +KYN+L+ LL+ +MDGS+ILIF++TK+GCDQ+TRQLRMDGWPAL+
Sbjct: 386 ANQSINQVIEIVPTPEKYNRLLTLLKQLMDGSKILIFVETKRGCDQVTRQLRMDGWPALA 445

Query: 374 IHGDKSQAERDWVLSEFRSGKSPIMTATDVAAH---VKDVKYVINYDFPGSLEDYVHRIG 433
           IHGDK+Q+ERD VL+EF+SG+SPIMTATDVAA    VKD+K V+NYDFP +LEDY+HRIG
Sbjct: 446 IHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIG 505

Query: 434 RTGRAGAKGTAYTFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGG--- 468
           RTGRAGAKG A+TFFT  NA+FA+EL+ IL+EAGQ V P L+A+ R +     G GG   
Sbjct: 506 RTGRAGAKGMAFTFFTHDNAKFARELVKILQEAGQVVPPTLSALVRSSGSGYGGSGGGRN 565

[Close]

BLAST of Cp4.1LG02g14170 vs. TAIR 10
Match: AT5G63120.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 491.5 bits (1264), Expect = 7.5e-139
Identity = 250/392 (63.78%), Postives = 302/392 (77.04%), Query Frame = 0


Query: 14  YRDRRSDSGFGGSTGYGNSVRSSSSKSDYHASEAPKKVDLDGLPHFEKNFYIEASSVAEM 73
           Y DR     +GG  G     R  SSK +  +   PK+ +   L HFEKNFY+E+ +V  M
Sbjct: 86  YGDRNGGGNWGGGGG-----RGGSSKRELDSVSLPKQ-NFGNLVHFEKNFYVESPTVQAM 145

Query: 74  TEREVEEYRTRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFTEPTPIQSQGWPMA 133
           TE++V  YRT R+I+VEGRDVPKP+K F+D  FPD +++ IAK GFTEPTPIQ+QGWPMA
Sbjct: 146 TEQDVAMYRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMA 205

Query: 134 LKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEAT 193
           LKGRDLIGIAETGSGKTLAYLLPA+VHV+AQP L   DGPIVL+LAPTRELAVQIQ+E+ 
Sbjct: 206 LKGRDLIGIAETGSGKTLAYLLPALVHVSAQPRLGQDDGPIVLILAPTRELAVQIQEESR 265

Query: 194 KFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLD 253
           KFG  S +++TCIYGG PKGPQ+RDL++GVEIVIATPGRLIDM+E  HTNL+RVTYLVLD
Sbjct: 266 KFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNLKRVTYLVLD 325

Query: 254 EADRMLDMGFDPQIRKIVSQV-------------------------------IIGSPDLK 313
           EADRMLDMGF+PQIRKIVSQ+                               IIGS DLK
Sbjct: 326 EADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLARQFLRDPYKAIIGSTDLK 385

Query: 314 ANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALS 373
           AN +I Q ++IV   +KYN+L+ LL+ +MDGS+ILIF++TK+GCDQ+TRQLRMDGWPAL+
Sbjct: 386 ANQSINQVIEIVPTPEKYNRLLTLLKQLMDGSKILIFVETKRGCDQVTRQLRMDGWPALA 445

Query: 374 IHGDKSQAERDWVLSEFRSGKSPIMTATDVAA 375
           IHGDK+Q+ERD VL+EF+SG+SPIMTATDVAA
Sbjct: 446 IHGDKTQSERDRVLAEFKSGRSPIMTATDVAA 471

[Close]

BLAST of Cp4.1LG02g14170 vs. TAIR 10
Match: AT3G01540.2 (DEAD box RNA helicase 1 )

HSP 1 Score: 401.0 bits (1029), Expect = 1.3e-111
Identity = 224/448 (50.00%), Postives = 297/448 (66.29%), Query Frame = 0


Query: 69  SVAEMTEREVEEYRTRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFTEPTPIQSQ 128
           S A  +E   E Y  R EITV G  VP P+ SF   GFP  +++E+  AGF+ PTPIQ+Q
Sbjct: 128 SSAPASELSPEAYSRRHEITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTPIQAQ 187

Query: 129 GWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGD-GPIVLVLAPTRELAVQ 188
            WP+A++GRD++ IA+TGSGKTL YL+P  +H+  Q I +    GP +LVL+PTRELA Q
Sbjct: 188 SWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHL--QRIRNDSRMGPTILVLSPTRELATQ 247

Query: 189 IQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRV 248
           IQ+EA KFG SS+I  TC+YGG PKGPQ+RDL++G +IV+ATPGRL D++E    +LR++
Sbjct: 248 IQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQI 307

Query: 249 TYLVLDEADRMLDMGFDPQIRKIV-------------------------------SQVII 308
           +YLVLDEADRMLDMGF+PQIRKIV                               +QV I
Sbjct: 308 SYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVNI 367

Query: 309 GSPD-LKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRM 368
           G+ D L AN +I QH+++V+  +K  +L ++L     GS+++IF  TK+ CDQ+TR L  
Sbjct: 368 GNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRNLTR 427

Query: 369 DGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAAH---VKDVKYVINYDFPGSLE 428
             + A +IHGDKSQ ERD VL++FRSG++P++ ATDVAA    VKD++ V+NYDFP  +E
Sbjct: 428 Q-FGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVE 487

Query: 429 DYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIAILEEAGQKVSP---ELAAMGRGAP- 472
           DYVHRIGRTGRAGA G A+TFF   +++ A +LI ILE A Q+V P   E+A  G G   
Sbjct: 488 DYVHRIGRTGRAGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQIREMATRGGGGMN 547

[Close]

BLAST of Cp4.1LG02g14170 vs. TAIR 10
Match: AT3G01540.1 (DEAD box RNA helicase 1 )

HSP 1 Score: 401.0 bits (1029), Expect = 1.3e-111
Identity = 224/448 (50.00%), Postives = 297/448 (66.29%), Query Frame = 0


Query: 69  SVAEMTEREVEEYRTRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFTEPTPIQSQ 128
           S A  +E   E Y  R EITV G  VP P+ SF   GFP  +++E+  AGF+ PTPIQ+Q
Sbjct: 128 SSAPASELSPEAYSRRHEITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTPIQAQ 187

Query: 129 GWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGD-GPIVLVLAPTRELAVQ 188
            WP+A++GRD++ IA+TGSGKTL YL+P  +H+  Q I +    GP +LVL+PTRELA Q
Sbjct: 188 SWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHL--QRIRNDSRMGPTILVLSPTRELATQ 247

Query: 189 IQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRV 248
           IQ+EA KFG SS+I  TC+YGG PKGPQ+RDL++G +IV+ATPGRL D++E    +LR++
Sbjct: 248 IQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQI 307

Query: 249 TYLVLDEADRMLDMGFDPQIRKIV-------------------------------SQVII 308
           +YLVLDEADRMLDMGF+PQIRKIV                               +QV I
Sbjct: 308 SYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVNI 367

Query: 309 GSPD-LKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRM 368
           G+ D L AN +I QH+++V+  +K  +L ++L     GS+++IF  TK+ CDQ+TR L  
Sbjct: 368 GNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRNLTR 427

Query: 369 DGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAAH---VKDVKYVINYDFPGSLE 428
             + A +IHGDKSQ ERD VL++FRSG++P++ ATDVAA    VKD++ V+NYDFP  +E
Sbjct: 428 Q-FGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVE 487

Query: 429 DYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIAILEEAGQKVSP---ELAAMGRGAP- 472
           DYVHRIGRTGRAGA G A+TFF   +++ A +LI ILE A Q+V P   E+A  G G   
Sbjct: 488 DYVHRIGRTGRAGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQIREMATRGGGGMN 547

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g14170 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C718	2.0e-221	79.01	DEAD-box ATP-dependent RNA helicase 20 OS=Arabidopsis thaliana OX=3702 GN=RH20 P...	[more]
Q5QMN3	3.4e-221	80.20	DEAD-box ATP-dependent RNA helicase 20 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q8W4R3	1.5e-168	63.14	DEAD-box ATP-dependent RNA helicase 30 OS=Arabidopsis thaliana OX=3702 GN=RH30 P...	[more]
Q5N7W4	3.4e-168	63.11	DEAD-box ATP-dependent RNA helicase 30 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q4X195	1.8e-153	59.38	ATP-dependent RNA helicase dbp2 OS=Neosartorya fumigata (strain ATCC MYA-4609 / ...	[more]

BLAST of Cp4.1LG02g14170 vs. NCBI nr


Match Name	Identity	Description
XP_023525778.1	93.07	DEAD-box ATP-dependent RNA helicase 20 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022949583.1	92.08	DEAD-box ATP-dependent RNA helicase 20-like isoform X1 [Cucurbita moschata] >KAG...	[more]
KAG6606721.1	91.68	DEAD-box ATP-dependent RNA helicase 20, partial [Cucurbita argyrosperma subsp. s...	[more]
XP_038903955.1	91.09	DEAD-box ATP-dependent RNA helicase 20 [Benincasa hispida]	[more]
XP_004146825.1	90.69	DEAD-box ATP-dependent RNA helicase 20 [Cucumis sativus] >KGN59824.1 hypothetica...	[more]

BLAST of Cp4.1LG02g14170 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1GCG9	92.08	DEAD-box ATP-dependent RNA helicase 20-like isoform X1 OS=Cucurbita moschata OX=...	[more]
A0A0A0LFT6	90.69	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G848820 PE=3 SV=1	[more]
A0A6J1KAT4	91.29	LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase 20-like OS=Cucurbita ma...	[more]
A0A1S3BHT9	90.50	DEAD-box ATP-dependent RNA helicase 20 OS=Cucumis melo OX=3656 GN=LOC103490017 P...	[more]
A0A6J1D4P2	89.90	DEAD-box ATP-dependent RNA helicase 20 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of Cp4.1LG02g14170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G55150.1	1.4e-222	79.01	DEA(D/H)-box RNA helicase family protein	[more]
AT5G63120.2	1.1e-169	63.14	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT5G63120.1	7.5e-139	63.78	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT3G01540.2	1.3e-111	50.00	DEAD box RNA helicase 1	[more]
AT3G01540.1	1.3e-111	50.00	DEAD box RNA helicase 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 327..405 e-value: 2.7E-25 score: 100.0
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 299..405 e-value: 2.0E-23 score: 82.9
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 302..444 score: 18.754814
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 118..307 e-value: 5.5E-51 score: 185.4
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 130..389 score: 25.982374
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 53..289 e-value: 5.0E-76 score: 257.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 290..445 e-value: 1.0E-48 score: 166.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 48..419
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 285..437
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 123..275 e-value: 3.7E-45 score: 153.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..42
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 444..471
None	No IPR available	PANTHER	PTHR47958	ATP-DEPENDENT RNA HELICASE DBP3	coord: 55..274
None	No IPR available	PANTHER	PTHR47958	ATP-DEPENDENT RNA HELICASE DBP3	coord: 273..456
None	No IPR available	PANTHER	PTHR47958:SF73	LD32873P	coord: 273..456
None	No IPR available	PANTHER	PTHR47958:SF73	LD32873P	coord: 55..274
None	No IPR available	CDD	cd18787	SF2_C_DEAD	coord: 287..414 e-value: 7.06973E-56 score: 180.396
IPR000629	ATP-dependent RNA helicase DEAD-box, conserved site	PROSITE	PS00039	DEAD_ATP_HELICASE	coord: 251..259
IPR014014	RNA helicase, DEAD-box type, Q motif	PROSITE	PS51195	Q_MOTIF	coord: 99..127 score: 11.888256

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG02g14170.1	Cp4.1LG02g14170.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
cellular_component	GO:1990904	ribonucleoprotein complex
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003724	RNA helicase activity
molecular_function	GO:0003676	nucleic acid binding