Cp4.1LG02g14050 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG02g14050
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Descriptionprotein CHLORORESPIRATORY REDUCTION 7, chloroplastic
LocationCp4.1LG02: 12099940 .. 12100907 (-)
RNA-Seq ExpressionCp4.1LG02g14050
SyntenyCp4.1LG02g14050
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTCTAAAATAAACAATATACAAAATTTAATATTTTCTTTTCATTTGGTATTTTAATAAACATTTTATGAATTGTAAATAAGAGGGTAAAAGGGTAAATAATAAGAAAATGGAGGGCAAACAGTGGAAAGAAGCTGAACAAAACAGCTTGGTGAGTGTTAAAGCATTATCCCCAATCTCCTACGAGGGTTTGTTTCAGTTGAAGCTTCAGAGCTCATCAAATGGAGAGAGCAGCTCTTCACAAGCATTTCCAGAGCTTCAATGGAATAATTTCTTATTCCAATTCTACCCTCTACCCATGTACGAAATTACCCTTTTCTTTTCTTCTATTTTATTTCCAGATTTTCATTTTTTTTTTTTTTTCCATTTTTTTTGGAGTACAGTGAGAAGACGAAGAACAGAACAGCAGAACTCAAAGTGCTTGTCGGGTGCTTCTTCCTTTCTTCTTCCCAAGCTGCCTACTGCCTCCAAACATCAGCAACGAATCAAGGTTTATCCAATTTCACTGTTTTTATGGCTTTTTTCTTACCATTTTCAAATAGAAAACGAAGTATGTGTTGGATGATAAAAGTCCCACATCGGCTAATTTAGAGAATGATGGTTAAAACCATGAGAGCTTATGCTCAGAGGGGACAATATCATACCATTGTGGAAAGTCGTGTGAACTAAGAGTTACGAGGGAATGTTTAGGTATATGCGAGTAGTAGAAGAAGAAGAAGAGCAAATGAAAGTAGTGATACGTATGTGCTTTTGGAGCCTGGAGAAGATGAGAAATTTGTCTCCAAAGAAGAATTGGAAGCCATTTTGAAAGGTTGGCTTCAAAATTGGCCAGGTGAAGCTCTTCCACCTGATCTTCAACGCTTTGAATCCATTGAGGAAGCTGTTTCTTTCTTGGTTAAGTTTGTTTGTGAACTCGAAATCGATGGAGATATCGGTTCCATTCAATGGTATCAAGTTCGTCTCGAGTGA

mRNA sequence

ATTCTAAAATAAACAATATACAAAATTTAATATTTTCTTTTCATTTGGTATTTTAATAAACATTTTATGAATTGTAAATAAGAGGGTAAAAGGGTAAATAATAAGAAAATGGAGGGCAAACAGTGGAAAGAAGCTGAACAAAACAGCTTGGTGAGTGTTAAAGCATTATCCCCAATCTCCTACGAGGGTTTGTTTCAGTTGAAGCTTCAGAGCTCATCAAATGGAGAGAGCAGCTCTTCACAAGCATTTCCAGAGCTTCAATGGAATAATTTCTTATTCCAATTCTACCCTCTACCCATAAGAGCAAATGAAAGTAGTGATACGTATGTGCTTTTGGAGCCTGGAGAAGATGAGAAATTTGTCTCCAAAGAAGAATTGGAAGCCATTTTGAAAGGTTGGCTTCAAAATTGGCCAGGTGAAGCTCTTCCACCTGATCTTCAACGCTTTGAATCCATTGAGGAAGCTGTTTCTTTCTTGGTTAAGTTTGTTTGTGAACTCGAAATCGATGGAGATATCGGTTCCATTCAATGGTATCAAGTTCGTCTCGAGTGA

Coding sequence (CDS)

ATGGAGGGCAAACAGTGGAAAGAAGCTGAACAAAACAGCTTGGTGAGTGTTAAAGCATTATCCCCAATCTCCTACGAGGGTTTGTTTCAGTTGAAGCTTCAGAGCTCATCAAATGGAGAGAGCAGCTCTTCACAAGCATTTCCAGAGCTTCAATGGAATAATTTCTTATTCCAATTCTACCCTCTACCCATAAGAGCAAATGAAAGTAGTGATACGTATGTGCTTTTGGAGCCTGGAGAAGATGAGAAATTTGTCTCCAAAGAAGAATTGGAAGCCATTTTGAAAGGTTGGCTTCAAAATTGGCCAGGTGAAGCTCTTCCACCTGATCTTCAACGCTTTGAATCCATTGAGGAAGCTGTTTCTTTCTTGGTTAAGTTTGTTTGTGAACTCGAAATCGATGGAGATATCGGTTCCATTCAATGGTATCAAGTTCGTCTCGAGTGA

Protein sequence

MEGKQWKEAEQNSLVSVKALSPISYEGLFQLKLQSSSNGESSSSQAFPELQWNNFLFQFYPLPIRANESSDTYVLLEPGEDEKFVSKEELEAILKGWLQNWPGEALPPDLQRFESIEEAVSFLVKFVCELEIDGDIGSIQWYQVRLE
Homology
[Close]
BLAST of Cp4.1LG02g14050 vs. ExPASy Swiss-Prot
Match: Q9FL87 (Protein CHLORORESPIRATORY REDUCTION 7, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR7 PE=2 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.1e-29
Identity = 56/83 (67.47%), Postives = 73/83 (87.95%), Query Frame = 0 

Query: 65  RANESSDTYVLLEPGEDEKFVSKEELEAILKGWLQNWPGEALPPDLQRFESIEEAVSFLV 124
           R + +SDTYVLLE G+DE+FV+++EL+A L+GWL+NWP  +LPPDL RF+ ++EAV FLV
Sbjct: 74  RVHSNSDTYVLLEAGQDEQFVTEDELKAKLRGWLENWPVNSLPPDLARFDDLDEAVDFLV 133

Query: 125 KFVCELEIDGDIGSIQWYQVRLE 148
           K VCELEIDG++GS+QWYQVRLE
Sbjct: 134 KAVCELEIDGEVGSVQWYQVRLE 156

[Close]
BLAST of Cp4.1LG02g14050 vs. NCBI nr
Match: XP_023525361.1 (protein CHLORORESPIRATORY REDUCTION 7, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 174 bits (440), Expect = 1.22e-52
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0 

Query: 65  RANESSDTYVLLEPGEDEKFVSKEELEAILKGWLQNWPGEALPPDLQRFESIEEAVSFLV 124
           RANESSDTYVLLEPGEDEKFVSKEELEAILKGWLQNWPGEALPPDLQRFESIEEAVSFLV
Sbjct: 72  RANESSDTYVLLEPGEDEKFVSKEELEAILKGWLQNWPGEALPPDLQRFESIEEAVSFLV 131

Query: 125 KFVCELEIDGDIGSIQWYQVRLE 147
           KFVCELEIDGDIGSIQWYQVRLE
Sbjct: 132 KFVCELEIDGDIGSIQWYQVRLE 154

[Close]
BLAST of Cp4.1LG02g14050 vs. NCBI nr
Match: XP_022948390.1 (protein CHLORORESPIRATORY REDUCTION 7, chloroplastic [Cucurbita moschata] >KAG6607097.1 Protein CHLORORESPIRATORY REDUCTION 7, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036786.1 Protein CHLORORESPIRATORY REDUCTION 7, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 171 bits (434), Expect = 9.69e-52
Identity = 81/83 (97.59%), Postives = 83/83 (100.00%), Query Frame = 0 

Query: 65  RANESSDTYVLLEPGEDEKFVSKEELEAILKGWLQNWPGEALPPDLQRFESIEEAVSFLV 124
           RANESSDTYVLLEPGEDEKFVSK+ELEAILKGWLQNWPGEALPPDLQRF+SIEEAVSFLV
Sbjct: 71  RANESSDTYVLLEPGEDEKFVSKQELEAILKGWLQNWPGEALPPDLQRFDSIEEAVSFLV 130

Query: 125 KFVCELEIDGDIGSIQWYQVRLE 147
           KFVCELEIDGDIGSIQWYQVRLE
Sbjct: 131 KFVCELEIDGDIGSIQWYQVRLE 153

[Close]
BLAST of Cp4.1LG02g14050 vs. NCBI nr
Match: XP_022998049.1 (protein CHLORORESPIRATORY REDUCTION 7, chloroplastic [Cucurbita maxima])

HSP 1 Score: 169 bits (427), Expect = 1.20e-50
Identity = 81/83 (97.59%), Postives = 81/83 (97.59%), Query Frame = 0 

Query: 65  RANESSDTYVLLEPGEDEKFVSKEELEAILKGWLQNWPGEALPPDLQRFESIEEAVSFLV 124
           RANESSDTYVLLEPGEDEKFVSK ELEAILKGWLQNWPGEALPPDLQRFESIEEAVSFLV
Sbjct: 73  RANESSDTYVLLEPGEDEKFVSKHELEAILKGWLQNWPGEALPPDLQRFESIEEAVSFLV 132

Query: 125 KFVCELEIDGDIGSIQWYQVRLE 147
           KFVCELEIDGDIGSIQWYQV LE
Sbjct: 133 KFVCELEIDGDIGSIQWYQVCLE 155

[Close]
BLAST of Cp4.1LG02g14050 vs. NCBI nr
Match: XP_022155024.1 (protein CHLORORESPIRATORY REDUCTION 7, chloroplastic [Momordica charantia])

HSP 1 Score: 150 bits (379), Expect = 2.41e-43
Identity = 72/83 (86.75%), Postives = 77/83 (92.77%), Query Frame = 0 

Query: 65  RANESSDTYVLLEPGEDEKFVSKEELEAILKGWLQNWPGEALPPDLQRFESIEEAVSFLV 124
           R N+SSDTYV+LEPGEDEKFVS+EELEAILKGWLQNW G  LPPDL RFESIEEAVSFL+
Sbjct: 75  RGNQSSDTYVVLEPGEDEKFVSEEELEAILKGWLQNWAGP-LPPDLSRFESIEEAVSFLL 134

Query: 125 KFVCELEIDGDIGSIQWYQVRLE 147
           K VCELEIDGD+GSIQWYQVRLE
Sbjct: 135 KSVCELEIDGDVGSIQWYQVRLE 156

[Close]
BLAST of Cp4.1LG02g14050 vs. NCBI nr
Match: XP_038881333.1 (protein CHLORORESPIRATORY REDUCTION 7, chloroplastic [Benincasa hispida])

HSP 1 Score: 149 bits (377), Expect = 4.84e-43
Identity = 71/83 (85.54%), Postives = 77/83 (92.77%), Query Frame = 0 

Query: 65  RANESSDTYVLLEPGEDEKFVSKEELEAILKGWLQNWPGEALPPDLQRFESIEEAVSFLV 124
           R N+SSDTYVLLEPGE+EKFVSKEELEAILKGWL+NWP   LPPDL RF+SIEEAVSFLV
Sbjct: 75  RVNQSSDTYVLLEPGEEEKFVSKEELEAILKGWLENWP-TPLPPDLSRFQSIEEAVSFLV 134

Query: 125 KFVCELEIDGDIGSIQWYQVRLE 147
           K VCELEIDGD+GSIQWYQVRL+
Sbjct: 135 KSVCELEIDGDVGSIQWYQVRLD 156

[Close]
BLAST of Cp4.1LG02g14050 vs. ExPASy TrEMBL
Match: A0A6J1G9P9 (protein CHLORORESPIRATORY REDUCTION 7, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111452081 PE=4 SV=1)

HSP 1 Score: 171 bits (434), Expect = 4.69e-52
Identity = 81/83 (97.59%), Postives = 83/83 (100.00%), Query Frame = 0 

Query: 65  RANESSDTYVLLEPGEDEKFVSKEELEAILKGWLQNWPGEALPPDLQRFESIEEAVSFLV 124
           RANESSDTYVLLEPGEDEKFVSK+ELEAILKGWLQNWPGEALPPDLQRF+SIEEAVSFLV
Sbjct: 71  RANESSDTYVLLEPGEDEKFVSKQELEAILKGWLQNWPGEALPPDLQRFDSIEEAVSFLV 130

Query: 125 KFVCELEIDGDIGSIQWYQVRLE 147
           KFVCELEIDGDIGSIQWYQVRLE
Sbjct: 131 KFVCELEIDGDIGSIQWYQVRLE 153

[Close]
BLAST of Cp4.1LG02g14050 vs. ExPASy TrEMBL
Match: A0A6J1KD99 (protein CHLORORESPIRATORY REDUCTION 7, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111492814 PE=4 SV=1)

HSP 1 Score: 169 bits (427), Expect = 5.79e-51
Identity = 81/83 (97.59%), Postives = 81/83 (97.59%), Query Frame = 0 

Query: 65  RANESSDTYVLLEPGEDEKFVSKEELEAILKGWLQNWPGEALPPDLQRFESIEEAVSFLV 124
           RANESSDTYVLLEPGEDEKFVSK ELEAILKGWLQNWPGEALPPDLQRFESIEEAVSFLV
Sbjct: 73  RANESSDTYVLLEPGEDEKFVSKHELEAILKGWLQNWPGEALPPDLQRFESIEEAVSFLV 132

Query: 125 KFVCELEIDGDIGSIQWYQVRLE 147
           KFVCELEIDGDIGSIQWYQV LE
Sbjct: 133 KFVCELEIDGDIGSIQWYQVCLE 155

[Close]
BLAST of Cp4.1LG02g14050 vs. ExPASy TrEMBL
Match: A0A6J1DNZ6 (protein CHLORORESPIRATORY REDUCTION 7, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111022171 PE=4 SV=1)

HSP 1 Score: 150 bits (379), Expect = 1.17e-43
Identity = 72/83 (86.75%), Postives = 77/83 (92.77%), Query Frame = 0 

Query: 65  RANESSDTYVLLEPGEDEKFVSKEELEAILKGWLQNWPGEALPPDLQRFESIEEAVSFLV 124
           R N+SSDTYV+LEPGEDEKFVS+EELEAILKGWLQNW G  LPPDL RFESIEEAVSFL+
Sbjct: 75  RGNQSSDTYVVLEPGEDEKFVSEEELEAILKGWLQNWAGP-LPPDLSRFESIEEAVSFLL 134

Query: 125 KFVCELEIDGDIGSIQWYQVRLE 147
           K VCELEIDGD+GSIQWYQVRLE
Sbjct: 135 KSVCELEIDGDVGSIQWYQVRLE 156

[Close]
BLAST of Cp4.1LG02g14050 vs. ExPASy TrEMBL
Match: A0A5D3CWA0 (Protein CHLORORESPIRATORY REDUCTION 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold692G00210 PE=4 SV=1)

HSP 1 Score: 145 bits (366), Expect = 2.32e-41
Identity = 69/83 (83.13%), Postives = 76/83 (91.57%), Query Frame = 0 

Query: 65  RANESSDTYVLLEPGEDEKFVSKEELEAILKGWLQNWPGEALPPDLQRFESIEEAVSFLV 124
           R NESSDTYVLLEPGE+EKFVSK+ELE ILK WL+NWP  +LPPDL RF+SIEEAVSFLV
Sbjct: 100 RVNESSDTYVLLEPGEEEKFVSKQELETILKVWLENWP-TSLPPDLSRFQSIEEAVSFLV 159

Query: 125 KFVCELEIDGDIGSIQWYQVRLE 147
           K VCELEIDGD+GSIQWYQVRL+
Sbjct: 160 KSVCELEIDGDVGSIQWYQVRLD 181

[Close]
BLAST of Cp4.1LG02g14050 vs. ExPASy TrEMBL
Match: A0A0A0KZ70 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G101280 PE=4 SV=1)

HSP 1 Score: 144 bits (364), Expect = 2.64e-41
Identity = 67/83 (80.72%), Postives = 76/83 (91.57%), Query Frame = 0 

Query: 65  RANESSDTYVLLEPGEDEKFVSKEELEAILKGWLQNWPGEALPPDLQRFESIEEAVSFLV 124
           R NESSDTYVLLEPGE+EKFVSK+ELE ILKGWL+NWP   LPPDL RF+SIEEAV+FLV
Sbjct: 81  RINESSDTYVLLEPGEEEKFVSKQELETILKGWLENWP-TPLPPDLSRFQSIEEAVTFLV 140

Query: 125 KFVCELEIDGDIGSIQWYQVRLE 147
           K VCELEIDGD+GSIQWY+VR++
Sbjct: 141 KSVCELEIDGDVGSIQWYEVRID 162

[Close]
BLAST of Cp4.1LG02g14050 vs. TAIR 10
Match: AT5G39210.1 (chlororespiratory reduction 7 )

HSP 1 Score: 131.0 bits (328), Expect = 8.1e-31
Identity = 56/83 (67.47%), Postives = 73/83 (87.95%), Query Frame = 0 

Query: 65  RANESSDTYVLLEPGEDEKFVSKEELEAILKGWLQNWPGEALPPDLQRFESIEEAVSFLV 124
           R + +SDTYVLLE G+DE+FV+++EL+A L+GWL+NWP  +LPPDL RF+ ++EAV FLV
Sbjct: 74  RVHSNSDTYVLLEAGQDEQFVTEDELKAKLRGWLENWPVNSLPPDLARFDDLDEAVDFLV 133

Query: 125 KFVCELEIDGDIGSIQWYQVRLE 148
           K VCELEIDG++GS+QWYQVRLE
Sbjct: 134 KAVCELEIDGEVGSVQWYQVRLE 156

The following BLAST results are available for this feature:
BLAST of Cp4.1LG02g14050 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FL871.1e-2967.47Protein CHLORORESPIRATORY REDUCTION 7, chloroplastic OS=Arabidopsis thaliana OX=... [more]
BLAST of Cp4.1LG02g14050 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023525361.11.22e-52100.00protein CHLORORESPIRATORY REDUCTION 7, chloroplastic [Cucurbita pepo subsp. pepo... [more]
XP_022948390.19.69e-5297.59protein CHLORORESPIRATORY REDUCTION 7, chloroplastic [Cucurbita moschata] >KAG66... [more]
XP_022998049.11.20e-5097.59protein CHLORORESPIRATORY REDUCTION 7, chloroplastic [Cucurbita maxima][more]
XP_022155024.12.41e-4386.75protein CHLORORESPIRATORY REDUCTION 7, chloroplastic [Momordica charantia][more]
XP_038881333.14.84e-4385.54protein CHLORORESPIRATORY REDUCTION 7, chloroplastic [Benincasa hispida][more]
BLAST of Cp4.1LG02g14050 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1G9P94.69e-5297.59protein CHLORORESPIRATORY REDUCTION 7, chloroplastic OS=Cucurbita moschata OX=36... [more]
A0A6J1KD995.79e-5197.59protein CHLORORESPIRATORY REDUCTION 7, chloroplastic OS=Cucurbita maxima OX=3661... [more]
A0A6J1DNZ61.17e-4386.75protein CHLORORESPIRATORY REDUCTION 7, chloroplastic OS=Momordica charantia OX=3... [more]
A0A5D3CWA02.32e-4183.13Protein CHLORORESPIRATORY REDUCTION 7 OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A0A0KZ702.64e-4180.72Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G101280 PE=4 SV=1[more]
BLAST of Cp4.1LG02g14050 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G39210.18.1e-3167.47chlororespiratory reduction 7 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038150Protein CHLORORESPIRATORY REDUCTION 7-like superfamilyGENE3D3.90.940.40Protein CHLORORESPIRATORY REDUCTION 7coord: 72..144
e-value: 3.6E-30
score: 106.1
IPR021954Protein CHLORORESPIRATORY REDUCTION 7PFAMPF12095CRR7coord: 69..147
e-value: 7.2E-27
score: 93.6
IPR021954Protein CHLORORESPIRATORY REDUCTION 7PANTHERPTHR36803PROTEIN CHLORORESPIRATORY REDUCTION 7, CHLOROPLASTICcoord: 65..147

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG02g14050.1Cp4.1LG02g14050.1mRNA