Cp4.1LG02g13750 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG02g13750
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Homeobox Hox-B3-like protein
Location	Cp4.1LG02: 12289389 .. 12290027 (-)
RNA-Seq Expression	Cp4.1LG02g13750
Synteny	Cp4.1LG02g13750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGACAATTTCGATCATCTGACCCAAACCCATCTCCCCTTTCATTCCATCGACCCCAGATCCCTCCTCCTCCACCAGAACTCCGCCACCCACCACTACTTTCCTCTCCAGCTCACTGCGGAGACTTTTTCCATGGAAAGAGGACCAAGGTACAGAGCCTACGCAGAGCTTAGAGAATCCAAGCTCCGATTGAGAAACGCCATGTATCGTGACGGCGAACAGCCCGAGAAATCCACGCCACCGGCGAAGAAGCAAGTGAGATTCGTGGGTTCAGAGACCGTTCGGAAAAGGTCTGCAACAGTAGCGCAATCGGTGCCGGATTTCTCTGCTGTATTGAGGAAGGAGAACAGAAGGCCACCGCCGGGGCTATCGCCGGTGATGGAGATGACACCGCCAGGGAAGACGTGGGGGAAGAATAACAACATTGGAGGGATATCGGCGAATTCGAGGGGGAGTAAGTCAGCGAGTGCAGGGGAGAAAAGGGGCGGAGGGTTGGCGGCGGCAAGGAAGAGCTACGCTGGATTTGAGGAGCTGAAGGGGTTTTCTACTGCAGCGGCAAACGCCATTAACGGTGAAAACAAGAGAGGAGGAGGTGGAAGGAGAGGGAAGACTGTATTGGGTGTTAGACAGATTTGA

mRNA sequence

ATGGCGGACAATTTCGATCATCTGACCCAAACCCATCTCCCCTTTCATTCCATCGACCCCAGATCCCTCCTCCTCCACCAGAACTCCGCCACCCACCACTACTTTCCTCTCCAGCTCACTGCGGAGACTTTTTCCATGGAAAGAGGACCAAGGTACAGAGCCTACGCAGAGCTTAGAGAATCCAAGCTCCGATTGAGAAACGCCATGTATCGTGACGGCGAACAGCCCGAGAAATCCACGCCACCGGCGAAGAAGCAAGTGAGATTCGTGGGTTCAGAGACCGTTCGGAAAAGGTCTGCAACAGTAGCGCAATCGGTGCCGGATTTCTCTGCTGTATTGAGGAAGGAGAACAGAAGGCCACCGCCGGGGCTATCGCCGGTGATGGAGATGACACCGCCAGGGAAGACGTGGGGGAAGAATAACAACATTGGAGGGATATCGGCGAATTCGAGGGGGAGTAAGTCAGCGAGTGCAGGGGAGAAAAGGGGCGGAGGGTTGGCGGCGGCAAGGAAGAGCTACGCTGGATTTGAGGAGCTGAAGGGGTTTTCTACTGCAGCGGCAAACGCCATTAACGGTGAAAACAAGAGAGGAGGAGGTGGAAGGAGAGGGAAGACTGTATTGGGTGTTAGACAGATTTGA

Coding sequence (CDS)

ATGGCGGACAATTTCGATCATCTGACCCAAACCCATCTCCCCTTTCATTCCATCGACCCCAGATCCCTCCTCCTCCACCAGAACTCCGCCACCCACCACTACTTTCCTCTCCAGCTCACTGCGGAGACTTTTTCCATGGAAAGAGGACCAAGGTACAGAGCCTACGCAGAGCTTAGAGAATCCAAGCTCCGATTGAGAAACGCCATGTATCGTGACGGCGAACAGCCCGAGAAATCCACGCCACCGGCGAAGAAGCAAGTGAGATTCGTGGGTTCAGAGACCGTTCGGAAAAGGTCTGCAACAGTAGCGCAATCGGTGCCGGATTTCTCTGCTGTATTGAGGAAGGAGAACAGAAGGCCACCGCCGGGGCTATCGCCGGTGATGGAGATGACACCGCCAGGGAAGACGTGGGGGAAGAATAACAACATTGGAGGGATATCGGCGAATTCGAGGGGGAGTAAGTCAGCGAGTGCAGGGGAGAAAAGGGGCGGAGGGTTGGCGGCGGCAAGGAAGAGCTACGCTGGATTTGAGGAGCTGAAGGGGTTTTCTACTGCAGCGGCAAACGCCATTAACGGTGAAAACAAGAGAGGAGGAGGTGGAAGGAGAGGGAAGACTGTATTGGGTGTTAGACAGATTTGA

Protein sequence

MADNFDHLTQTHLPFHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRESKLRLRNAMYRDGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSAVLRKENRRPPPGLSPVMEMTPPGKTWGKNNNIGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELKGFSTAAANAINGENKRGGGGRRGKTVLGVRQI

Homology

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BLAST of Cp4.1LG02g13750 vs. NCBI nr
Match: XP_023524771.1 (uncharacterized protein LOC111788608 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 408 bits (1048), Expect = 2.89e-143
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0


Query: 1   MADNFDHLTQTHLPFHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRE 60
           MADNFDHLTQTHLPFHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRE
Sbjct: 1   MADNFDHLTQTHLPFHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRE 60

Query: 61  SKLRLRNAMYRDGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSAVLRKENRRP 120
           SKLRLRNAMYRDGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSAVLRKENRRP
Sbjct: 61  SKLRLRNAMYRDGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSAVLRKENRRP 120

Query: 121 PPGLSPVMEMTPPGKTWGKNNNIGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELK 180
           PPGLSPVMEMTPPGKTWGKNNNIGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELK
Sbjct: 121 PPGLSPVMEMTPPGKTWGKNNNIGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELK 180

Query: 181 GFSTAAANAINGENKRGGGGRRGKTVLGVRQI 212
           GFSTAAANAINGENKRGGGGRRGKTVLGVRQI
Sbjct: 181 GFSTAAANAINGENKRGGGGRRGKTVLGVRQI 212

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BLAST of Cp4.1LG02g13750 vs. NCBI nr
Match: KAG7036757.1 (hypothetical protein SDJN02_00377, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 396 bits (1017), Expect = 1.48e-138
Identity = 209/212 (98.58%), Postives = 209/212 (98.58%), Query Frame = 0


Query: 1   MADNFDHLTQTHLPFHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRE 60
           MADNFDH TQTHL FHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRE
Sbjct: 1   MADNFDHQTQTHLSFHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRE 60

Query: 61  SKLRLRNAMYRDGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSAVLRKENRRP 120
           SKLRLRNAMYRDGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSAVLRKENRRP
Sbjct: 61  SKLRLRNAMYRDGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSAVLRKENRRP 120

Query: 121 PPGLSPVMEMTPPGKTWGKNNNIGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELK 180
           PPGLSPVMEMTPPGKTWGKNN IGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELK
Sbjct: 121 PPGLSPVMEMTPPGKTWGKNN-IGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELK 180

Query: 181 GFSTAAANAINGENKRGGGGRRGKTVLGVRQI 212
           GFSTAAANAINGENKRGGGGRRGKTVLGVRQI
Sbjct: 181 GFSTAAANAINGENKRGGGGRRGKTVLGVRQI 211

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BLAST of Cp4.1LG02g13750 vs. NCBI nr
Match: KAG6607056.1 (hypothetical protein SDJN03_00398, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 394 bits (1013), Expect = 6.05e-138
Identity = 208/212 (98.11%), Postives = 208/212 (98.11%), Query Frame = 0


Query: 1   MADNFDHLTQTHLPFHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRE 60
           MADNFDH TQTHL FHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRE
Sbjct: 1   MADNFDHQTQTHLSFHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRE 60

Query: 61  SKLRLRNAMYRDGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSAVLRKENRRP 120
           SKLRLRN MYRDGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSAVLRKENRRP
Sbjct: 61  SKLRLRNVMYRDGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSAVLRKENRRP 120

Query: 121 PPGLSPVMEMTPPGKTWGKNNNIGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELK 180
           PPGLSPVMEMTPPGKTWGKNN IGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELK
Sbjct: 121 PPGLSPVMEMTPPGKTWGKNN-IGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELK 180

Query: 181 GFSTAAANAINGENKRGGGGRRGKTVLGVRQI 212
           GFSTAAANAINGENKRGGGGRRGKTVLGVRQI
Sbjct: 181 GFSTAAANAINGENKRGGGGRRGKTVLGVRQI 211

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BLAST of Cp4.1LG02g13750 vs. NCBI nr
Match: XP_022948564.1 (uncharacterized protein LOC111452204 [Cucurbita moschata])

HSP 1 Score: 394 bits (1013), Expect = 6.05e-138
Identity = 208/212 (98.11%), Postives = 209/212 (98.58%), Query Frame = 0


Query: 1   MADNFDHLTQTHLPFHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRE 60
           MADNFDH +QTHL FHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRE
Sbjct: 1   MADNFDHQSQTHLSFHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRE 60

Query: 61  SKLRLRNAMYRDGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSAVLRKENRRP 120
           SKLRLRNAMYRDGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSAVLRKENRRP
Sbjct: 61  SKLRLRNAMYRDGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSAVLRKENRRP 120

Query: 121 PPGLSPVMEMTPPGKTWGKNNNIGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELK 180
           PPGLSPVMEMTPPGKTWGKNN IGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELK
Sbjct: 121 PPGLSPVMEMTPPGKTWGKNN-IGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELK 180

Query: 181 GFSTAAANAINGENKRGGGGRRGKTVLGVRQI 212
           GFSTAAANAINGENKRGGGGRRGKTVLGVRQI
Sbjct: 181 GFSTAAANAINGENKRGGGGRRGKTVLGVRQI 211

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BLAST of Cp4.1LG02g13750 vs. NCBI nr
Match: XP_022998093.1 (uncharacterized protein LOC111492844 [Cucurbita maxima])

HSP 1 Score: 391 bits (1005), Expect = 9.67e-137
Identity = 207/212 (97.64%), Postives = 210/212 (99.06%), Query Frame = 0


Query: 1   MADNFDHLTQTHLPFHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRE 60
           MADNFDHLTQTHLPFHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRE
Sbjct: 1   MADNFDHLTQTHLPFHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRE 60

Query: 61  SKLRLRNAMYRDGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSAVLRKENRRP 120
           SKLRLRN+MYRDGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFS+VLRKEN+RP
Sbjct: 61  SKLRLRNSMYRDGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSSVLRKENKRP 120

Query: 121 PPGLSPVMEMTPPGKTWGKNNNIGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELK 180
           PPGLSPVMEMTPPGKTWGKNN IGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELK
Sbjct: 121 PPGLSPVMEMTPPGKTWGKNN-IGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELK 180

Query: 181 GFSTAAANAINGENKRGGGGRRGKTVLGVRQI 212
           GFSTAAANAINGENKRGGG RRGKTVLGVRQI
Sbjct: 181 GFSTAAANAINGENKRGGG-RRGKTVLGVRQI 210

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BLAST of Cp4.1LG02g13750 vs. ExPASy TrEMBL
Match: A0A6J1GA97 (uncharacterized protein LOC111452204 OS=Cucurbita moschata OX=3662 GN=LOC111452204 PE=4 SV=1)

HSP 1 Score: 394 bits (1013), Expect = 2.93e-138
Identity = 208/212 (98.11%), Postives = 209/212 (98.58%), Query Frame = 0


Query: 1   MADNFDHLTQTHLPFHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRE 60
           MADNFDH +QTHL FHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRE
Sbjct: 1   MADNFDHQSQTHLSFHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRE 60

Query: 61  SKLRLRNAMYRDGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSAVLRKENRRP 120
           SKLRLRNAMYRDGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSAVLRKENRRP
Sbjct: 61  SKLRLRNAMYRDGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSAVLRKENRRP 120

Query: 121 PPGLSPVMEMTPPGKTWGKNNNIGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELK 180
           PPGLSPVMEMTPPGKTWGKNN IGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELK
Sbjct: 121 PPGLSPVMEMTPPGKTWGKNN-IGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELK 180

Query: 181 GFSTAAANAINGENKRGGGGRRGKTVLGVRQI 212
           GFSTAAANAINGENKRGGGGRRGKTVLGVRQI
Sbjct: 181 GFSTAAANAINGENKRGGGGRRGKTVLGVRQI 211

[Close]

BLAST of Cp4.1LG02g13750 vs. ExPASy TrEMBL
Match: A0A6J1KFU5 (uncharacterized protein LOC111492844 OS=Cucurbita maxima OX=3661 GN=LOC111492844 PE=4 SV=1)

HSP 1 Score: 391 bits (1005), Expect = 4.68e-137
Identity = 207/212 (97.64%), Postives = 210/212 (99.06%), Query Frame = 0


Query: 1   MADNFDHLTQTHLPFHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRE 60
           MADNFDHLTQTHLPFHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRE
Sbjct: 1   MADNFDHLTQTHLPFHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRE 60

Query: 61  SKLRLRNAMYRDGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSAVLRKENRRP 120
           SKLRLRN+MYRDGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFS+VLRKEN+RP
Sbjct: 61  SKLRLRNSMYRDGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSSVLRKENKRP 120

Query: 121 PPGLSPVMEMTPPGKTWGKNNNIGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELK 180
           PPGLSPVMEMTPPGKTWGKNN IGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELK
Sbjct: 121 PPGLSPVMEMTPPGKTWGKNN-IGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELK 180

Query: 181 GFSTAAANAINGENKRGGGGRRGKTVLGVRQI 212
           GFSTAAANAINGENKRGGG RRGKTVLGVRQI
Sbjct: 181 GFSTAAANAINGENKRGGG-RRGKTVLGVRQI 210

[Close]

BLAST of Cp4.1LG02g13750 vs. ExPASy TrEMBL
Match: A0A0A0L9P8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G258110 PE=4 SV=1)

HSP 1 Score: 316 bits (809), Expect = 2.78e-107
Identity = 174/202 (86.14%), Postives = 180/202 (89.11%), Query Frame = 0


Query: 12  HLPFHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRESKLRLRNAMYR 71
           HLPFHSID RSLLLHQNSA  H   L LT E FSMERGPRYRAYAELRESKLRLRNAMYR
Sbjct: 7   HLPFHSIDSRSLLLHQNSAADHPISLHLTPEPFSMERGPRYRAYAELRESKLRLRNAMYR 66

Query: 72  DGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSAVLRKENRRPPPG-LSPVMEM 131
             E PEKSTPP KKQV+F+GSETVRKRSATVAQSVPDFSAVLRKENR+PPPG LSPVMEM
Sbjct: 67  HDEHPEKSTPPPKKQVKFLGSETVRKRSATVAQSVPDFSAVLRKENRKPPPGMLSPVMEM 126

Query: 132 TPPGKTWGKNNNIGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEELKGFSTAAANAI 191
           TPPGKTWGKN  IGG+S  SRGSKSASAGEKRGGGL A RKSYAGFEELKGFSTAAANAI
Sbjct: 127 TPPGKTWGKN--IGGLSTTSRGSKSASAGEKRGGGLTAVRKSYAGFEELKGFSTAAANAI 186

Query: 192 NGENKRGGGGRRGKTVLGVRQI 212
           NGEN++GG  RRGKTVLGVRQI
Sbjct: 187 NGENRKGG--RRGKTVLGVRQI 204

[Close]

BLAST of Cp4.1LG02g13750 vs. ExPASy TrEMBL
Match: A0A5A7U2K6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001060 PE=4 SV=1)

HSP 1 Score: 304 bits (778), Expect = 1.51e-102
Identity = 170/214 (79.44%), Postives = 181/214 (84.58%), Query Frame = 0


Query: 1   MADNFDHLTQTHLPFHSIDPRSLLLHQNSA-THHYFPLQLTAETFSMERGPRYRAYAELR 60
           MAD F HL     PFHSID RSLLLHQNSA T H   L LT E FSMERGPRY+AYAELR
Sbjct: 1   MADKFHHL-----PFHSIDSRSLLLHQNSAATDHPISLHLTPEPFSMERGPRYKAYAELR 60

Query: 61  ESKLRLRNAMYRDGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSAVLRKENRR 120
           ESKLR RNAMYR  E PEKSTPP KKQ++F+GSETVRKRSATVAQSVPDFSAVLRKENR+
Sbjct: 61  ESKLRFRNAMYRHDEHPEKSTPPPKKQIKFLGSETVRKRSATVAQSVPDFSAVLRKENRK 120

Query: 121 PPPG-LSPVMEMTPPGKTWGKNNNIGGISANSRGSKSASAGEKRGGGLAAARKSYAGFEE 180
           PPPG LSPVMEMTPPGKTWGKN  +GG+S NSRGSKSASAGEKRGGGL   RKSYAGFEE
Sbjct: 121 PPPGMLSPVMEMTPPGKTWGKN--MGGLSTNSRGSKSASAGEKRGGGLTTVRKSYAGFEE 180

Query: 181 LKGFSTAAANAINGENKRGGGGRRGKTVLGVRQI 212
           LKGFSTA A AINGEN++GG  R+GKTVLG RQ+
Sbjct: 181 LKGFSTATAKAINGENRKGG--RKGKTVLGSRQV 205

[Close]

BLAST of Cp4.1LG02g13750 vs. ExPASy TrEMBL
Match: A0A6J1D4H7 (uncharacterized protein LOC111016939 OS=Momordica charantia OX=3673 GN=LOC111016939 PE=4 SV=1)

HSP 1 Score: 291 bits (746), Expect = 1.24e-97
Identity = 169/216 (78.24%), Postives = 179/216 (82.87%), Query Frame = 0


Query: 1   MADNFDHLTQTHLPFHSIDPRSLLLHQNSATHHYFPLQLTAETFSMERGPRYRAYAELRE 60
           MAD  DHL     PFH+IDPRSLLLHQNS       L+LTA +FSMERGPRYRAYAELRE
Sbjct: 1   MADQIDHL-----PFHAIDPRSLLLHQNSGADQPISLRLTAGSFSMERGPRYRAYAELRE 60

Query: 61  SKLRLRNAMYRDGEQPEKSTPPAKKQVRFVGSETVRKRSATVAQSVPDFSAVLRKENRRP 120
           SKLR RNA Y DGE PEK TPPAKKQV+F+GSETVRKRSA VAQSVPDFSA LRKENR+P
Sbjct: 61  SKLRRRNARYCDGEAPEKPTPPAKKQVKFLGSETVRKRSAAVAQSVPDFSAALRKENRKP 120

Query: 121 PPG-LSPVMEMTPPGKTWGKNNNIGGISANSRGSKSASAGEKRGG---GLAAARKSYAGF 180
           P   L PVMEMTPPGKTWGKNN   G+S NSRGSKSASAGEKRGG   GL AARKSYAGF
Sbjct: 121 PAAALPPVMEMTPPGKTWGKNNVGQGLS-NSRGSKSASAGEKRGGAGGGLTAARKSYAGF 180

Query: 181 EELKGFSTAAANAINGENKRGGGGRRGKTVLGVRQI 212
           EELKGFSTAAANAINGE +RGG  R+GKTVLG+RQI
Sbjct: 181 EELKGFSTAAANAINGEIRRGG--RKGKTVLGIRQI 208

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BLAST of Cp4.1LG02g13750 vs. TAIR 10
Match: AT5G38300.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67035.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 127.9 bits (320), Expect = 9.9e-30
Identity = 114/271 (42.07%), Postives = 144/271 (53.14%), Query Frame = 0


Query: 1   MADNFDHLTQTHLPFHSIDPRSLLLHQNSATHHYFPLQLTAETFS-MERGPRYRAYAELR 60
           MAD   + T   L F S+DP SL+L QNS TH    L+L  + FS  ERGPRY  Y+ LR
Sbjct: 1   MADIISNPTMEQL-FFSVDPMSLILSQNSDTHQ---LKLLLDGFSGFERGPRYDEYSRLR 60

Query: 61  ESKLRLRNAMYRD-GEQPEKSTPPAKKQVRFVGS-------------------------- 120
           ESKLR++    +   E+ E   P  KKQVRF G+                          
Sbjct: 61  ESKLRMKRDFQKFLEEEDEVEEPRIKKQVRFEGNSVNSQEGDKFSPEKKKQSRFEGISVI 120

Query: 121 --------ETVRKRS------------ATVAQSVPDFSAVLRKENRRPPPGLSPVMEMTP 180
                   E V+K+S            +++AQSVPDFSAV+RKENRRP      +  +TP
Sbjct: 121 SQEDRFSPEKVKKQSRFGFSPLKKAVPSSLAQSVPDFSAVIRKENRRP----VNINTITP 180

Query: 181 PGKTWGKNNNIGGISAN-SRGSKSASAGEKRGGG---LAAARKSYAGFEELKGFSTAAAN 213
           P  T  K+ N G ++ + SRGSKSASAGEK+  G   +  ARKSYA  E+LK  S AAA+
Sbjct: 181 PPPT-SKSRNGGVLTGSASRGSKSASAGEKKSKGMMMMGMARKSYANVEDLKKISMAAAS 240

[Close]

BLAST of Cp4.1LG02g13750 vs. TAIR 10
Match: AT1G67035.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G38300.1). )

HSP 1 Score: 97.1 bits (240), Expect = 1.9e-20
Identity = 93/222 (41.89%), Postives = 120/222 (54.05%), Query Frame = 0


Query: 22  SLLLHQN--SATHHYFPLQLTAETFSMERGPRYRAYAELRESKLR--------LRNAMYR 81
           SLL   N  S T     L +    +  ERG RY  YA LRESKLR        L+    R
Sbjct: 12  SLLFPVNPMSDTQQKLKLLVDNGDYGFERGSRYGEYARLRESKLRMKRDFEKILKEEQVR 71

Query: 82  DG-EQPEKSTPPAKKQVRFVGSETVRK----RSATVAQSVPDFSAVLRKENRRPPPG--- 141
            G  + E+     +K+ RF  +   RK     S+++AQSVPDFS+++RKENRRPP     
Sbjct: 72  FGFTREEEIRVLPEKKTRFGFNPNQRKTSSSSSSSLAQSVPDFSSMIRKENRRPPVNSNL 131

Query: 142 LSPVMEMTPPGKTWGKNNNIGGISAN-SRGSKSASAGEKRGGGLAAARKSYAGFEELKGF 201
           L    E+TPP     K+ N    + +  RGS SASAGEK+G G+   RKSYA  ++LK  
Sbjct: 132 LPRRTELTPPSM---KSRNAAVFAGSVIRGSVSASAGEKKGIGM--MRKSYAAVDDLKKI 191

Query: 202 STAAANAINGENKR-----GGGGRR-------GKTVLGVRQI 213
           S AAA+AING   +     GGGGR+       G+T+LG RQI
Sbjct: 192 SMAAASAINGGGGKRRSIGGGGGRKSLGGGGGGRTILGYRQI 228

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BLAST of Cp4.1LG02g13750 vs. TAIR 10
Match: AT1G67035.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cotyledon; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G38300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 71.6 bits (174), Expect = 8.4e-13
Identity = 81/210 (38.57%), Postives = 101/210 (48.10%), Query Frame = 0


Query: 22  SLLLHQN--SATHHYFPLQLTAETFSMERGPRYRAYAELRESKLR--------LRNAMYR 81
           SLL   N  S T     L +    +  ERG RY  YA LRESKLR        L+    R
Sbjct: 12  SLLFPVNPMSDTQQKLKLLVDNGDYGFERGSRYGEYARLRESKLRMKRDFEKILKEEQVR 71

Query: 82  DG-EQPEKSTPPAKKQVRFVGSETVRK----RSATVAQSVPDFSAVLRKENRRPPPG--- 141
            G  + E+     +K+ RF  +   RK     S+++AQSVPDFS+++RKENRRPP     
Sbjct: 72  FGFTREEEIRVLPEKKTRFGFNPNQRKTSSSSSSSLAQSVPDFSSMIRKENRRPPVNSNL 131

Query: 142 LSPVMEMTPPGKTWGKNNNIGGISAN-SRGSKSASAGEKRGGGLAAARKSYAGFEELKGF 201
           L    E+TPP     K+ N    + +  RGS SASAGEK+GG     RKS  G       
Sbjct: 132 LPRRTELTPPSM---KSRNAAVFAGSVIRGSVSASAGEKKGG-----RKSLGG------- 189

Query: 202 STAAANAINGENKRGGGGRRGKTVLGVRQI 213
                         GGGGR   T+LG RQI
Sbjct: 192 --------------GGGGR---TILGYRQI 189

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g13750 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG02g13750 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023524771.1	2.89e-143	100.00	uncharacterized protein LOC111788608 [Cucurbita pepo subsp. pepo]	[more]
KAG7036757.1	1.48e-138	98.58	hypothetical protein SDJN02_00377, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6607056.1	6.05e-138	98.11	hypothetical protein SDJN03_00398, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022948564.1	6.05e-138	98.11	uncharacterized protein LOC111452204 [Cucurbita moschata]	[more]
XP_022998093.1	9.67e-137	97.64	uncharacterized protein LOC111492844 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG02g13750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GA97	2.93e-138	98.11	uncharacterized protein LOC111452204 OS=Cucurbita moschata OX=3662 GN=LOC1114522...	[more]
A0A6J1KFU5	4.68e-137	97.64	uncharacterized protein LOC111492844 OS=Cucurbita maxima OX=3661 GN=LOC111492844...	[more]
A0A0A0L9P8	2.78e-107	86.14	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G258110 PE=4 SV=1	[more]
A0A5A7U2K6	1.51e-102	79.44	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1D4H7	1.24e-97	78.24	uncharacterized protein LOC111016939 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]

BLAST of Cp4.1LG02g13750 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G38300.1	9.9e-30	42.07	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G67035.2	1.9e-20	41.89	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G67035.1	8.4e-13	38.57	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..156
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..162
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 189..212
None	No IPR available	PANTHER	PTHR37708	FAMILY NOT NAMED	coord: 12..212
None	No IPR available	PANTHER	PTHR37708:SF2	SUBFAMILY NOT NAMED	coord: 12..212

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG02g13750.1	Cp4.1LG02g13750.1	mRNA