Cp4.1LG02g13700 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG02g13700
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	MYB domain class transcription factor
Location	Cp4.1LG02: 12067756 .. 12068321 (-)
RNA-Seq Expression	Cp4.1LG02g13700
Synteny	Cp4.1LG02g13700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGACATGAATTCAGGCACCAACGCGAAGGGTTGTGCGAGAGGGCACTGGAGGCCAGCAGAGGACGCCAAGCTGAAGGAGGTGGTCGCCCTATACGGCCCCCAAAACTGGAACCTCATCGCGGAGAAACTGGACGGCAGATCTGGTAGTGTGGTGGTTTAAAGTCACAAGTTTTGAAGGTAATTCACTGACATGGGGGGTTGTTGTTTTGGACAAGGTAGGTAAGAGCTGCAGGCTGCGATGGTTCAACCAGCTGGACCCGAGGATCAACCGAGGAGCCTTCACACACGAGGAAGAGGAGAGGCTAATGCAGGCGCATAGAGTTCACGGCAACAAATGGGCCATGATTGCCAGGATGTTTCCTGGGCGCACTGATAATGGTGTCAAGAATCATTGGCATGTCATCATGGCTAGAAAATGTAGACACCATTTTGCTGCTGGAAGGCGGCGCAGGAGAACGACAACCTCGGATGAAGATTCAGCTACAAATGAACCGCCGTCGTTTATGGACCGGAGTGTTGAACCGGCGTTGTTCTTCGACTTTCTTGGAGTAGGAGGTGGACCCACA

mRNA sequence

GGACATGAATTCAGGCACCAACGCGAAGGGTTGTGCGAGAGGGCACTGGAGGCCAGCAGAGGACGCCAAGCTGAAGGAGGTGGTCGCCCTATACGGCCCCCAAAACTGGAACCTCATCGCGGAGAAACTGGACGGCAGATCTGGTAAGAGCTGCAGGCTGCGATGGTTCAACCAGCTGGACCCGAGGATCAACCGAGGAGCCTTCACACACGAGGAAGAGGAGAGGCTAATGCAGGCGCATAGAGTTCACGGCAACAAATGGGCCATGATTGCCAGGATGTTTCCTGGGCGCACTGATAATGGTGTCAAGAATCATTGGCATGTCATCATGGCTAGAAAATGTAGACACCATTTTGCTGCTGGAAGGCGGCGCAGGAGAACGACAACCTCGGATGAAGATTCAGCTACAAATGAACCGCCGTCGTTTATGGACCGGAGTGTTGAACCGGCGTTGTTCTTCGACTTTCTTGGAGTAGGAGGTGGACCCACA

Coding sequence (CDS)

ATGAATTCAGGCACCAACGCGAAGGGTTGTGCGAGAGGGCACTGGAGGCCAGCAGAGGACGCCAAGCTGAAGGAGGTGGTCGCCCTATACGGCCCCCAAAACTGGAACCTCATCGCGGAGAAACTGGACGGCAGATCTGGTAAGAGCTGCAGGCTGCGATGGTTCAACCAGCTGGACCCGAGGATCAACCGAGGAGCCTTCACACACGAGGAAGAGGAGAGGCTAATGCAGGCGCATAGAGTTCACGGCAACAAATGGGCCATGATTGCCAGGATGTTTCCTGGGCGCACTGATAATGGTGTCAAGAATCATTGGCATGTCATCATGGCTAGAAAATGTAGACACCATTTTGCTGCTGGAAGGCGGCGCAGGAGAACGACAACCTCGGATGAAGATTCAGCTACAAATGAACCGCCGTCGTTTATGGACCGGAGTGTTGAACCGGCGTTGTTCTTCGACTTTCTTGGAGTAGGAGGTGGACCCACA

Protein sequence

MNSGTNAKGCARGHWRPAEDAKLKEVVALYGPQNWNLIAEKLDGRSGKSCRLRWFNQLDPRINRGAFTHEEEERLMQAHRVHGNKWAMIARMFPGRTDNGVKNHWHVIMARKCRHHFAAGRRRRRTTTSDEDSATNEPPSFMDRSVEPALFFDFLGVGGGPT

Homology

[Close]

BLAST of Cp4.1LG02g13700 vs. ExPASy Swiss-Prot
Match: Q5NBM8 (Transcription factor CSA OS=Oryza sativa subsp. japonica OX=39947 GN=CSA PE=2 SV=2)

HSP 1 Score: 216.9 bits (551), Expect = 1.7e-55
Identity = 100/136 (73.53%), Postives = 112/136 (82.35%), Query Frame = 0


Query: 4   GTNAKGCARGHWRPAEDAKLKEVVALYGPQNWNLIAEKLDGRSGKSCRLRWFNQLDPRIN 63
           G   K CARGHWRPAEDAKLK++VA YGPQNWNLIAEKLDGRSGKSCRLRWFNQLDPRIN
Sbjct: 41  GVQGKLCARGHWRPAEDAKLKDLVAQYGPQNWNLIAEKLDGRSGKSCRLRWFNQLDPRIN 100

Query: 64  RGAFTHEEEERLMQAHRVHGNKWAMIARMFPGRTDNGVKNHWHVIMARKCRHHFAAGRRR 123
           R AFT EEEERLM AHR +GNKWA+IAR+FPGRTDN VKNHWHV+MAR+ R    A RRR
Sbjct: 101 RRAFTEEEEERLMAAHRAYGNKWALIARLFPGRTDNAVKNHWHVLMARRHREQSGAFRRR 160

Query: 124 RRTTTSDEDSATNEPP 140
           + +++S   +    PP
Sbjct: 161 KPSSSSASPAPAPAPP 176

[Close]

BLAST of Cp4.1LG02g13700 vs. ExPASy Swiss-Prot
Match: Q9LQX5 (Transcription factor MYB117 OS=Arabidopsis thaliana OX=3702 GN=MYB117 PE=2 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 5.6e-54
Identity = 96/123 (78.05%), Postives = 107/123 (86.99%), Query Frame = 0


Query: 2   NSGTNAKGCARGHWRPAEDAKLKEVVALYGPQNWNLIAEKLDGRSGKSCRLRWFNQLDPR 61
           +S +      RGHWRPAED KLKE+V++YGPQNWNLIAEKL GRSGKSCRLRWFNQLDPR
Sbjct: 88  SSSSKPSVLGRGHWRPAEDVKLKELVSIYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPR 147

Query: 62  INRGAFTHEEEERLMQAHRVHGNKWAMIARMFPGRTDNGVKNHWHVIMARKCRHHFAAGR 121
           INR AFT EEEERLMQAHR++GNKWAMIAR+FPGRTDN VKNHWHV+MARK R H +A R
Sbjct: 148 INRRAFTEEEEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVVMARKYREHSSAYR 207

Query: 122 RRR 125
           RR+
Sbjct: 208 RRK 210

[Close]

BLAST of Cp4.1LG02g13700 vs. ExPASy Swiss-Prot
Match: Q9SEZ4 (Transcription factor MYB105 OS=Arabidopsis thaliana OX=3702 GN=MYB105 PE=1 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 2.8e-53
Identity = 100/133 (75.19%), Postives = 110/133 (82.71%), Query Frame = 0


Query: 11  ARGHWRPAEDAKLKEVVALYGPQNWNLIAEKLDGRSGKSCRLRWFNQLDPRINRGAFTHE 70
           +RGHWRPAED KLKE+VA+YGPQNWNLIAEKL GRSGKSCRLRWFNQLDPRINR AFT E
Sbjct: 106 SRGHWRPAEDTKLKELVAVYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRINRRAFTEE 165

Query: 71  EEERLMQAHRVHGNKWAMIARMFPGRTDNGVKNHWHVIMARKCRHHFAAGRRRRRTTTSD 130
           EEERLMQAHR++GNKWAMIAR+FPGRTDN VKNHWHVIMARK R   ++  RRR+T  S 
Sbjct: 166 EEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVIMARKFREQ-SSSYRRRKTMVSL 225

Query: 131 EDSATNEPPSFMD 144
           +      P  F D
Sbjct: 226 KPLINPNPHIFND 237

[Close]

BLAST of Cp4.1LG02g13700 vs. ExPASy Swiss-Prot
Match: Q6R053 (Transcription factor MYB56 OS=Arabidopsis thaliana OX=3702 GN=MYB56 PE=1 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 2.7e-48
Identity = 92/145 (63.45%), Postives = 108/145 (74.48%), Query Frame = 0


Query: 3   SGTNAKGCARGHWRPAEDAKLKEVVALYGPQNWNLIAEKLDGRSGKSCRLRWFNQLDPRI 62
           SG N K C+RGHWRP EDAKLKE+VA +GPQNWNLI+  L GRSGKSCRLRWFNQLDPRI
Sbjct: 84  SGINTKVCSRGHWRPTEDAKLKELVAQFGPQNWNLISNHLLGRSGKSCRLRWFNQLDPRI 143

Query: 63  NRGAFTHEEEERLMQAHRVHGNKWAMIARMFPGRTDNGVKNHWHVIMARKCRHHFAAGRR 122
           N+ AFT EEE RL+ AHR +GNKWA+I+R+FPGRTDN VKNHWHVIMAR+ R      +R
Sbjct: 144 NKRAFTEEEEFRLLAAHRAYGNKWALISRLFPGRTDNAVKNHWHVIMARRTRE----SQR 203

Query: 123 RRRTTTSDEDSATNEPPSFMDRSVE 148
           +R+           +PP  + R  E
Sbjct: 204 QRQ-----------QPPPTLSRDAE 213

[Close]

BLAST of Cp4.1LG02g13700 vs. ExPASy Swiss-Prot
Match: Q9FX36 (Transcription factor MYB54 OS=Arabidopsis thaliana OX=3702 GN=MYB54 PE=1 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 3.9e-47
Identity = 87/128 (67.97%), Postives = 100/128 (78.12%), Query Frame = 0


Query: 10  CARGHWRPAEDAKLKEVVALYGPQNWNLIAEKLDGRSGKSCRLRWFNQLDPRINRGAFTH 69
           C+RGHWRPAED KLK++V  YGP NWN IA KL GRSGKSCRLRWFNQLDPRINR  FT 
Sbjct: 4   CSRGHWRPAEDEKLKDLVEQYGPHNWNAIALKLPGRSGKSCRLRWFNQLDPRINRNPFTE 63

Query: 70  EEEERLMQAHRVHGNKWAMIARMFPGRTDNGVKNHWHVIMARKCRHHFAAGRRRRRTTTS 129
           EEEERL+ AHR+HGN+W++IAR+FPGRTDN VKNHWHVIMAR+ R    +  R   +TTS
Sbjct: 64  EEEERLLAAHRIHGNRWSIIARLFPGRTDNAVKNHWHVIMARRTRQ--TSKPRLLPSTTS 123

Query: 130 DEDSATNE 138
                 +E
Sbjct: 124 SSSLMASE 129

[Close]

BLAST of Cp4.1LG02g13700 vs. NCBI nr
Match: XP_023523747.1 (transcription factor CSA-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 350 bits (898), Expect = 4.75e-122
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MNSGTNAKGCARGHWRPAEDAKLKEVVALYGPQNWNLIAEKLDGRSGKSCRLRWFNQLDP 60
           MNSGTNAKGCARGHWRPAEDAKLKEVVALYGPQNWNLIAEKLDGRSGKSCRLRWFNQLDP
Sbjct: 1   MNSGTNAKGCARGHWRPAEDAKLKEVVALYGPQNWNLIAEKLDGRSGKSCRLRWFNQLDP 60

Query: 61  RINRGAFTHEEEERLMQAHRVHGNKWAMIARMFPGRTDNGVKNHWHVIMARKCRHHFAAG 120
           RINRGAFTHEEEERLMQAHRVHGNKWAMIARMFPGRTDNGVKNHWHVIMARKCRHHFAAG
Sbjct: 61  RINRGAFTHEEEERLMQAHRVHGNKWAMIARMFPGRTDNGVKNHWHVIMARKCRHHFAAG 120

Query: 121 RRRRRTTTSDEDSATNEPPSFMDRSVEPALFFDFLGVGGGPT 162
           RRRRRTTTSDEDSATNEPPSFMDRSVEPALFFDFLGVGGGPT
Sbjct: 121 RRRRRTTTSDEDSATNEPPSFMDRSVEPALFFDFLGVGGGPT 162

[Close]

BLAST of Cp4.1LG02g13700 vs. NCBI nr
Match: XP_022997779.1 (transcription factor CSA-like [Cucurbita maxima])

HSP 1 Score: 336 bits (862), Expect = 1.47e-116
Identity = 155/162 (95.68%), Postives = 157/162 (96.91%), Query Frame = 0


Query: 1   MNSGTNAKGCARGHWRPAEDAKLKEVVALYGPQNWNLIAEKLDGRSGKSCRLRWFNQLDP 60
           MNSGTNAK CARGHWRPAEDAKLKE+VALYGPQNWNLIAEKLDGRSGKSCRLRWFNQLDP
Sbjct: 1   MNSGTNAKACARGHWRPAEDAKLKELVALYGPQNWNLIAEKLDGRSGKSCRLRWFNQLDP 60

Query: 61  RINRGAFTHEEEERLMQAHRVHGNKWAMIARMFPGRTDNGVKNHWHVIMARKCRHHFAAG 120
           RINR AFTHEEE RLMQAHRVHGNKWAMIAR+FPGRTDNGVKNHWHVIMARKCRHHFAAG
Sbjct: 61  RINRRAFTHEEEARLMQAHRVHGNKWAMIARLFPGRTDNGVKNHWHVIMARKCRHHFAAG 120

Query: 121 RRRRRTTTSDEDSATNEPPSFMDRSVEPALFFDFLGVGGGPT 162
           RRRRRT TSDEDS TNEPPSFMDRSVEPALFFDFLGVGGGPT
Sbjct: 121 RRRRRTATSDEDSPTNEPPSFMDRSVEPALFFDFLGVGGGPT 162

[Close]

BLAST of Cp4.1LG02g13700 vs. NCBI nr
Match: KAG6607124.1 (Transcription factor CSA, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 332 bits (851), Expect = 8.65e-115
Identity = 152/162 (93.83%), Postives = 156/162 (96.30%), Query Frame = 0


Query: 1   MNSGTNAKGCARGHWRPAEDAKLKEVVALYGPQNWNLIAEKLDGRSGKSCRLRWFNQLDP 60
           MNSGTNAK CARGHWRPAEDAKL+E+VALYGPQNWNLIAEKLDGRSGKSCRLRWFNQLDP
Sbjct: 7   MNSGTNAKACARGHWRPAEDAKLRELVALYGPQNWNLIAEKLDGRSGKSCRLRWFNQLDP 66

Query: 61  RINRGAFTHEEEERLMQAHRVHGNKWAMIARMFPGRTDNGVKNHWHVIMARKCRHHFAAG 120
           RINR AFTHEEEERLMQAHRVHGNKWAMIAR+FPGRTDNGVKNHWHVIMARKCRHHF AG
Sbjct: 67  RINRRAFTHEEEERLMQAHRVHGNKWAMIARLFPGRTDNGVKNHWHVIMARKCRHHFGAG 126

Query: 121 RRRRRTTTSDEDSATNEPPSFMDRSVEPALFFDFLGVGGGPT 162
           RRRRRTTTSDE SATN+PP FMDR VEPALFFDFLGVGGGPT
Sbjct: 127 RRRRRTTTSDEHSATNQPPPFMDRRVEPALFFDFLGVGGGPT 168

[Close]

BLAST of Cp4.1LG02g13700 vs. NCBI nr
Match: KAG7036816.1 (Transcription factor MYB-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 332 bits (850), Expect = 9.96e-115
Identity = 152/162 (93.83%), Postives = 156/162 (96.30%), Query Frame = 0


Query: 1   MNSGTNAKGCARGHWRPAEDAKLKEVVALYGPQNWNLIAEKLDGRSGKSCRLRWFNQLDP 60
           MNSGTNAK CARGHWRPAEDAKL+E+VALYGPQNWNLIAEKLDGRSGKSCRLRWFNQLDP
Sbjct: 1   MNSGTNAKACARGHWRPAEDAKLRELVALYGPQNWNLIAEKLDGRSGKSCRLRWFNQLDP 60

Query: 61  RINRGAFTHEEEERLMQAHRVHGNKWAMIARMFPGRTDNGVKNHWHVIMARKCRHHFAAG 120
           RINR AFTHEEEERLMQAHRVHGNKWAMIAR+FPGRTDNGVKNHWHVIMARKCRHHF AG
Sbjct: 61  RINRRAFTHEEEERLMQAHRVHGNKWAMIARLFPGRTDNGVKNHWHVIMARKCRHHFGAG 120

Query: 121 RRRRRTTTSDEDSATNEPPSFMDRSVEPALFFDFLGVGGGPT 162
           RRRRRTTTSDE SATN+PP FMDR VEPALFFDFLGVGGGPT
Sbjct: 121 RRRRRTTTSDEHSATNQPPLFMDRRVEPALFFDFLGVGGGPT 162

[Close]

BLAST of Cp4.1LG02g13700 vs. NCBI nr
Match: XP_022949264.1 (transcription factor CSA-like [Cucurbita moschata])

HSP 1 Score: 332 bits (850), Expect = 1.23e-114
Identity = 152/162 (93.83%), Postives = 156/162 (96.30%), Query Frame = 0


Query: 1   MNSGTNAKGCARGHWRPAEDAKLKEVVALYGPQNWNLIAEKLDGRSGKSCRLRWFNQLDP 60
           MNSGTNAK CARGHWRPAEDAKL+E+VALYGPQNWNLIAEKLDGRSGKSCRLRWFNQLDP
Sbjct: 7   MNSGTNAKACARGHWRPAEDAKLRELVALYGPQNWNLIAEKLDGRSGKSCRLRWFNQLDP 66

Query: 61  RINRGAFTHEEEERLMQAHRVHGNKWAMIARMFPGRTDNGVKNHWHVIMARKCRHHFAAG 120
           RINR AFT EEEERLMQAHRVHGNKWAMIAR+FPGRTDNGVKNHWHVIMARKCRHHF AG
Sbjct: 67  RINRRAFTQEEEERLMQAHRVHGNKWAMIARLFPGRTDNGVKNHWHVIMARKCRHHFGAG 126

Query: 121 RRRRRTTTSDEDSATNEPPSFMDRSVEPALFFDFLGVGGGPT 162
           RRRRRTTTSDEDSATN+PP FMDR VEPALFFDFLGVGGGPT
Sbjct: 127 RRRRRTTTSDEDSATNQPPPFMDRRVEPALFFDFLGVGGGPT 168

[Close]

BLAST of Cp4.1LG02g13700 vs. ExPASy TrEMBL
Match: A0A6J1KCI9 (transcription factor CSA-like OS=Cucurbita maxima OX=3661 GN=LOC111492634 PE=4 SV=1)

HSP 1 Score: 336 bits (862), Expect = 7.13e-117
Identity = 155/162 (95.68%), Postives = 157/162 (96.91%), Query Frame = 0


Query: 1   MNSGTNAKGCARGHWRPAEDAKLKEVVALYGPQNWNLIAEKLDGRSGKSCRLRWFNQLDP 60
           MNSGTNAK CARGHWRPAEDAKLKE+VALYGPQNWNLIAEKLDGRSGKSCRLRWFNQLDP
Sbjct: 1   MNSGTNAKACARGHWRPAEDAKLKELVALYGPQNWNLIAEKLDGRSGKSCRLRWFNQLDP 60

Query: 61  RINRGAFTHEEEERLMQAHRVHGNKWAMIARMFPGRTDNGVKNHWHVIMARKCRHHFAAG 120
           RINR AFTHEEE RLMQAHRVHGNKWAMIAR+FPGRTDNGVKNHWHVIMARKCRHHFAAG
Sbjct: 61  RINRRAFTHEEEARLMQAHRVHGNKWAMIARLFPGRTDNGVKNHWHVIMARKCRHHFAAG 120

Query: 121 RRRRRTTTSDEDSATNEPPSFMDRSVEPALFFDFLGVGGGPT 162
           RRRRRT TSDEDS TNEPPSFMDRSVEPALFFDFLGVGGGPT
Sbjct: 121 RRRRRTATSDEDSPTNEPPSFMDRSVEPALFFDFLGVGGGPT 162

[Close]

BLAST of Cp4.1LG02g13700 vs. ExPASy TrEMBL
Match: A0A6J1GCC3 (transcription factor CSA-like OS=Cucurbita moschata OX=3662 GN=LOC111452673 PE=4 SV=1)

HSP 1 Score: 332 bits (850), Expect = 5.95e-115
Identity = 152/162 (93.83%), Postives = 156/162 (96.30%), Query Frame = 0


Query: 1   MNSGTNAKGCARGHWRPAEDAKLKEVVALYGPQNWNLIAEKLDGRSGKSCRLRWFNQLDP 60
           MNSGTNAK CARGHWRPAEDAKL+E+VALYGPQNWNLIAEKLDGRSGKSCRLRWFNQLDP
Sbjct: 7   MNSGTNAKACARGHWRPAEDAKLRELVALYGPQNWNLIAEKLDGRSGKSCRLRWFNQLDP 66

Query: 61  RINRGAFTHEEEERLMQAHRVHGNKWAMIARMFPGRTDNGVKNHWHVIMARKCRHHFAAG 120
           RINR AFT EEEERLMQAHRVHGNKWAMIAR+FPGRTDNGVKNHWHVIMARKCRHHF AG
Sbjct: 67  RINRRAFTQEEEERLMQAHRVHGNKWAMIARLFPGRTDNGVKNHWHVIMARKCRHHFGAG 126

Query: 121 RRRRRTTTSDEDSATNEPPSFMDRSVEPALFFDFLGVGGGPT 162
           RRRRRTTTSDEDSATN+PP FMDR VEPALFFDFLGVGGGPT
Sbjct: 127 RRRRRTTTSDEDSATNQPPPFMDRRVEPALFFDFLGVGGGPT 168

[Close]

BLAST of Cp4.1LG02g13700 vs. ExPASy TrEMBL
Match: A0A6J1CRP1 (transcription factor MYB105-like OS=Momordica charantia OX=3673 GN=LOC111014141 PE=4 SV=1)

HSP 1 Score: 222 bits (566), Expect = 1.48e-71
Identity = 101/118 (85.59%), Postives = 109/118 (92.37%), Query Frame = 0


Query: 7   AKGCARGHWRPAEDAKLKEVVALYGPQNWNLIAEKLDGRSGKSCRLRWFNQLDPRINRGA 66
           +K CARGHWRPAEDAKLKE+VALYGPQNWNLIA+KL GRSGKSCRLRWFNQLDPRINR A
Sbjct: 35  SKLCARGHWRPAEDAKLKELVALYGPQNWNLIADKLQGRSGKSCRLRWFNQLDPRINRRA 94

Query: 67  FTHEEEERLMQAHRVHGNKWAMIARMFPGRTDNGVKNHWHVIMARKCRHHFAAGRRRR 124
           FT EEEERLMQAHR++GNKWA IAR+FPGRTDN VKNHWHVIMARKCR  F+A RRR+
Sbjct: 95  FTEEEEERLMQAHRLYGNKWACIARLFPGRTDNAVKNHWHVIMARKCREQFSAYRRRK 152

[Close]

BLAST of Cp4.1LG02g13700 vs. ExPASy TrEMBL
Match: A0A0A0LHV6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G100550 PE=4 SV=1)

HSP 1 Score: 224 bits (572), Expect = 3.11e-71
Identity = 106/145 (73.10%), Postives = 117/145 (80.69%), Query Frame = 0


Query: 5   TNAKGCARGHWRPAEDAKLKEVVALYGPQNWNLIAEKLDGRSGKSCRLRWFNQLDPRINR 64
           + +K C RGHWRPAED KLKE+V LYGPQNWNLIAEKL+GRSGKSCRLRWFNQLDPRINR
Sbjct: 4   SKSKVCGRGHWRPAEDTKLKELVGLYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINR 63

Query: 65  GAFTHEEEERLMQAHRVHGNKWAMIARMFPGRTDNGVKNHWHVIMARKCRHHFAAGRRRR 124
            AFT EEEERLMQAH ++GNKWAMIAR+FPGRTDNGVKNHWHV+MAR CR HF++ RR  
Sbjct: 64  KAFTEEEEERLMQAHEMYGNKWAMIARLFPGRTDNGVKNHWHVVMARNCRQHFSSYRRSS 123

Query: 125 RTTT---SDEDSATNEPPSFMDRSV 146
           R  T   S   SA   PP    RS+
Sbjct: 124 RNLTHSLSIASSALPTPPLPPTRSL 148

[Close]

BLAST of Cp4.1LG02g13700 vs. ExPASy TrEMBL
Match: A0A6J1I745 (transcription factor MYB105-like OS=Cucurbita maxima OX=3661 GN=LOC111471371 PE=4 SV=1)

HSP 1 Score: 220 bits (561), Expect = 6.33e-71
Identity = 107/157 (68.15%), Postives = 116/157 (73.89%), Query Frame = 0


Query: 5   TNAKGCARGHWRPAEDAKLKEVVALYGPQNWNLIAEKLDGRSGKSCRLRWFNQLDPRINR 64
           +N   C RGHWRPAED KLKE+VAL+GP NWNLIA KL GRSGKSCRLRW NQLDPRINR
Sbjct: 11  SNVSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRWLNQLDPRINR 70

Query: 65  GAFTHEEEERLMQAHRVHGNKWAMIARMFPGRTDNGVKNHWHVIMARKCRHHFAAGRRRR 124
            AFT +EEERLMQAH ++GNKWAMI+R+FPGRTDNGVKNHWHVIMARKCR    A   RR
Sbjct: 71  TAFTEQEEERLMQAHGIYGNKWAMISRLFPGRTDNGVKNHWHVIMARKCRQQHVASYTRR 130

Query: 125 RTTTSDEDSATNEPPSFMD--RSVEPALFFDFLGVGG 159
              +         PPS        EPA F DFLGVGG
Sbjct: 131 NRFSQPPPPPPPPPPSSGGGLEGGEPA-FIDFLGVGG 166

[Close]

BLAST of Cp4.1LG02g13700 vs. TAIR 10
Match: AT1G26780.1 (myb domain protein 117 )

HSP 1 Score: 211.8 bits (538), Expect = 4.0e-55
Identity = 96/123 (78.05%), Postives = 107/123 (86.99%), Query Frame = 0


Query: 2   NSGTNAKGCARGHWRPAEDAKLKEVVALYGPQNWNLIAEKLDGRSGKSCRLRWFNQLDPR 61
           +S +      RGHWRPAED KLKE+V++YGPQNWNLIAEKL GRSGKSCRLRWFNQLDPR
Sbjct: 88  SSSSKPSVLGRGHWRPAEDVKLKELVSIYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPR 147

Query: 62  INRGAFTHEEEERLMQAHRVHGNKWAMIARMFPGRTDNGVKNHWHVIMARKCRHHFAAGR 121
           INR AFT EEEERLMQAHR++GNKWAMIAR+FPGRTDN VKNHWHV+MARK R H +A R
Sbjct: 148 INRRAFTEEEEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVVMARKYREHSSAYR 207

Query: 122 RRR 125
           RR+
Sbjct: 208 RRK 210

[Close]

BLAST of Cp4.1LG02g13700 vs. TAIR 10
Match: AT1G26780.2 (myb domain protein 117 )

HSP 1 Score: 211.8 bits (538), Expect = 4.0e-55
Identity = 96/123 (78.05%), Postives = 107/123 (86.99%), Query Frame = 0


Query: 2   NSGTNAKGCARGHWRPAEDAKLKEVVALYGPQNWNLIAEKLDGRSGKSCRLRWFNQLDPR 61
           +S +      RGHWRPAED KLKE+V++YGPQNWNLIAEKL GRSGKSCRLRWFNQLDPR
Sbjct: 88  SSSSKPSVLGRGHWRPAEDVKLKELVSIYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPR 147

Query: 62  INRGAFTHEEEERLMQAHRVHGNKWAMIARMFPGRTDNGVKNHWHVIMARKCRHHFAAGR 121
           INR AFT EEEERLMQAHR++GNKWAMIAR+FPGRTDN VKNHWHV+MARK R H +A R
Sbjct: 148 INRRAFTEEEEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVVMARKYREHSSAYR 207

Query: 122 RRR 125
           RR+
Sbjct: 208 RRK 210

[Close]

BLAST of Cp4.1LG02g13700 vs. TAIR 10
Match: AT1G69560.1 (myb domain protein 105 )

HSP 1 Score: 209.5 bits (532), Expect = 2.0e-54
Identity = 100/133 (75.19%), Postives = 110/133 (82.71%), Query Frame = 0


Query: 11  ARGHWRPAEDAKLKEVVALYGPQNWNLIAEKLDGRSGKSCRLRWFNQLDPRINRGAFTHE 70
           +RGHWRPAED KLKE+VA+YGPQNWNLIAEKL GRSGKSCRLRWFNQLDPRINR AFT E
Sbjct: 106 SRGHWRPAEDTKLKELVAVYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRINRRAFTEE 165

Query: 71  EEERLMQAHRVHGNKWAMIARMFPGRTDNGVKNHWHVIMARKCRHHFAAGRRRRRTTTSD 130
           EEERLMQAHR++GNKWAMIAR+FPGRTDN VKNHWHVIMARK R   ++  RRR+T  S 
Sbjct: 166 EEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVIMARKFREQ-SSSYRRRKTMVSL 225

Query: 131 EDSATNEPPSFMD 144
           +      P  F D
Sbjct: 226 KPLINPNPHIFND 237

[Close]

BLAST of Cp4.1LG02g13700 vs. TAIR 10
Match: AT5G17800.1 (myb domain protein 56 )

HSP 1 Score: 193.0 bits (489), Expect = 1.9e-49
Identity = 92/145 (63.45%), Postives = 108/145 (74.48%), Query Frame = 0


Query: 3   SGTNAKGCARGHWRPAEDAKLKEVVALYGPQNWNLIAEKLDGRSGKSCRLRWFNQLDPRI 62
           SG N K C+RGHWRP EDAKLKE+VA +GPQNWNLI+  L GRSGKSCRLRWFNQLDPRI
Sbjct: 84  SGINTKVCSRGHWRPTEDAKLKELVAQFGPQNWNLISNHLLGRSGKSCRLRWFNQLDPRI 143

Query: 63  NRGAFTHEEEERLMQAHRVHGNKWAMIARMFPGRTDNGVKNHWHVIMARKCRHHFAAGRR 122
           N+ AFT EEE RL+ AHR +GNKWA+I+R+FPGRTDN VKNHWHVIMAR+ R      +R
Sbjct: 144 NKRAFTEEEEFRLLAAHRAYGNKWALISRLFPGRTDNAVKNHWHVIMARRTRE----SQR 203

Query: 123 RRRTTTSDEDSATNEPPSFMDRSVE 148
           +R+           +PP  + R  E
Sbjct: 204 QRQ-----------QPPPTLSRDAE 213

[Close]

BLAST of Cp4.1LG02g13700 vs. TAIR 10
Match: AT1G73410.1 (myb domain protein 54 )

HSP 1 Score: 189.1 bits (479), Expect = 2.8e-48
Identity = 87/128 (67.97%), Postives = 100/128 (78.12%), Query Frame = 0


Query: 10  CARGHWRPAEDAKLKEVVALYGPQNWNLIAEKLDGRSGKSCRLRWFNQLDPRINRGAFTH 69
           C+RGHWRPAED KLK++V  YGP NWN IA KL GRSGKSCRLRWFNQLDPRINR  FT 
Sbjct: 4   CSRGHWRPAEDEKLKDLVEQYGPHNWNAIALKLPGRSGKSCRLRWFNQLDPRINRNPFTE 63

Query: 70  EEEERLMQAHRVHGNKWAMIARMFPGRTDNGVKNHWHVIMARKCRHHFAAGRRRRRTTTS 129
           EEEERL+ AHR+HGN+W++IAR+FPGRTDN VKNHWHVIMAR+ R    +  R   +TTS
Sbjct: 64  EEEERLLAAHRIHGNRWSIIARLFPGRTDNAVKNHWHVIMARRTRQ--TSKPRLLPSTTS 123

Query: 130 DEDSATNE 138
                 +E
Sbjct: 124 SSSLMASE 129

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g13700 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5NBM8	1.7e-55	73.53	Transcription factor CSA OS=Oryza sativa subsp. japonica OX=39947 GN=CSA PE=2 SV...	[more]
Q9LQX5	5.6e-54	78.05	Transcription factor MYB117 OS=Arabidopsis thaliana OX=3702 GN=MYB117 PE=2 SV=1	[more]
Q9SEZ4	2.8e-53	75.19	Transcription factor MYB105 OS=Arabidopsis thaliana OX=3702 GN=MYB105 PE=1 SV=1	[more]
Q6R053	2.7e-48	63.45	Transcription factor MYB56 OS=Arabidopsis thaliana OX=3702 GN=MYB56 PE=1 SV=1	[more]
Q9FX36	3.9e-47	67.97	Transcription factor MYB54 OS=Arabidopsis thaliana OX=3702 GN=MYB54 PE=1 SV=1	[more]

BLAST of Cp4.1LG02g13700 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023523747.1	4.75e-122	100.00	transcription factor CSA-like [Cucurbita pepo subsp. pepo]	[more]
XP_022997779.1	1.47e-116	95.68	transcription factor CSA-like [Cucurbita maxima]	[more]
KAG6607124.1	8.65e-115	93.83	Transcription factor CSA, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7036816.1	9.96e-115	93.83	Transcription factor MYB-like protein, partial [Cucurbita argyrosperma subsp. ar...	[more]
XP_022949264.1	1.23e-114	93.83	transcription factor CSA-like [Cucurbita moschata]	[more]

BLAST of Cp4.1LG02g13700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KCI9	7.13e-117	95.68	transcription factor CSA-like OS=Cucurbita maxima OX=3661 GN=LOC111492634 PE=4 S...	[more]
A0A6J1GCC3	5.95e-115	93.83	transcription factor CSA-like OS=Cucurbita moschata OX=3662 GN=LOC111452673 PE=4...	[more]
A0A6J1CRP1	1.48e-71	85.59	transcription factor MYB105-like OS=Momordica charantia OX=3673 GN=LOC111014141 ...	[more]
A0A0A0LHV6	3.11e-71	73.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G100550 PE=4 SV=1	[more]
A0A6J1I745	6.33e-71	68.15	transcription factor MYB105-like OS=Cucurbita maxima OX=3661 GN=LOC111471371 PE=...	[more]

BLAST of Cp4.1LG02g13700 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G26780.1	4.0e-55	78.05	myb domain protein 117	[more]
AT1G26780.2	4.0e-55	78.05	myb domain protein 117	[more]
AT1G69560.1	2.0e-54	75.19	myb domain protein 105	[more]
AT5G17800.1	1.9e-49	63.45	myb domain protein 56	[more]
AT1G73410.1	2.8e-48	67.97	myb domain protein 54	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 63..111 e-value: 9.4E-13 score: 58.4 coord: 11..60 e-value: 1.4E-13 score: 61.2
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 12..58 score: 10.255157
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 59..109 score: 10.022909
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 66..106 e-value: 1.69794E-10 score: 51.4222
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 15..56 e-value: 3.61265E-13 score: 58.3558
None	No IPR available	GENE3D	1.10.10.60		coord: 12..63 e-value: 6.7E-23 score: 82.4
None	No IPR available	GENE3D	1.10.10.60		coord: 65..137 e-value: 2.8E-18 score: 67.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..140
None	No IPR available	PANTHER	PTHR45614:SF175	TRANSCRIPTION FACTOR MYB105	coord: 6..120
None	No IPR available	PANTHER	PTHR45614	MYB PROTEIN-RELATED	coord: 6..120
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 64..107 e-value: 4.2E-15 score: 55.7 coord: 12..57 e-value: 3.7E-15 score: 55.9
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 59..113 score: 26.52622
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 7..58 score: 19.711771
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 11..105

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG02g13700.1	Cp4.1LG02g13700.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding