Cp4.1LG02g13230 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTCCAATCAGAGGGTCGAGAAAGAAGAAGAAATTAGAGAGAAAGCTCGATGCCAATGCCAGTACTGCTTCAGATTCCTCTGAAAAGGACGACGCCCTTGATTGGTGGGACGATTTCTCTAGAAGAACCATTGGTATTTTGTTTCTATCTTTTCCTTTTAATTTCTTGATTTCTTCCCGAGTTCTTGCTCGATGCATTTGGGCGCAATAACATACCCATCGGTTCTGTTTACAAGATTTTCCTCTAATCATTTAACCTTTTGAAACAACTGATTTGAACTCGGTTGACTTACGTTGACACTGCCGCTTGCGTAGGGTAGTTTACTGATTCTGCTACTTTGATTGTGTAAAGACGCATGAACTCGTGTTTATCGTTTGTATGCATCGATGAGTTTCTGTGGTGATTCTGTTTCAGGATTTGGATCTGTTTTCTGTGATGCTAATGCTTGGGATTTGAAACGAGGCCTTGTGTGTGAGTTTGATGTGTTAGTGTTGAATTTATGA ATGGGTCCAATCAGAGGGTCGAGAAAGAAGAAGAAATTAGAGAGAAAGCTCGATGCCAATGCCAGTACTGCTTCAGATTCCTCTGAAAAGGACGACGCCCTTGATTGGTGGGACGATTTCTCTAGAAGAACCATTGGATTTGGATCTGTTTTCTGTGATGCTAATGCTTGGGATTTGAAACGAGGCCTTGTGTGTGAGTTTGATGTGTTAGTGTTGAATTTATGA ATGGGTCCAATCAGAGGGTCGAGAAAGAAGAAGAAATTAGAGAGAAAGCTCGATGCCAATGCCAGTACTGCTTCAGATTCCTCTGAAAAGGACGACGCCCTTGATTGGTGGGACGATTTCTCTAGAAGAACCATTGGATTTGGATCTGTTTTCTGTGATGCTAATGCTTGGGATTTGAAACGAGGCCTTGTGTGTGAGTTTGATGTGTTAGTGTTGAATTTATGA MGPIRGSRKKKKLERKLDANASTASDSSEKDDALDWWDDFSRRTIGFGSVFCDANAWDLKRGLVCEFDVLVLNL Homology
BLAST of Cp4.1LG02g13230 vs. NCBI nr
Match: XP_023523098.1 (protein ALP1-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023523103.1 protein ALP1-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023523108.1 protein ALP1-like isoform X3 [Cucurbita pepo subsp. pepo] >XP_023523112.1 protein ALP1-like isoform X4 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 95.9 bits (237), Expect = 2.81e-21 Identity = 48/49 (97.96%), Postives = 48/49 (97.96%), Query Frame = 0
BLAST of Cp4.1LG02g13230 vs. NCBI nr
Match: KAG6607212.1 (Protein ALP1-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 93.6 bits (231), Expect = 2.00e-20 Identity = 47/49 (95.92%), Postives = 47/49 (95.92%), Query Frame = 0
BLAST of Cp4.1LG02g13230 vs. NCBI nr
Match: KAG7036897.1 (Protein ALP1-like protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 93.6 bits (231), Expect = 2.00e-20 Identity = 47/49 (95.92%), Postives = 47/49 (95.92%), Query Frame = 0
BLAST of Cp4.1LG02g13230 vs. NCBI nr
Match: XP_022948999.1 (protein ALP1-like [Cucurbita moschata]) HSP 1 Score: 93.6 bits (231), Expect = 2.00e-20 Identity = 47/49 (95.92%), Postives = 47/49 (95.92%), Query Frame = 0
BLAST of Cp4.1LG02g13230 vs. NCBI nr
Match: XP_022997817.1 (protein ALP1-like [Cucurbita maxima]) HSP 1 Score: 93.6 bits (231), Expect = 2.00e-20 Identity = 47/49 (95.92%), Postives = 47/49 (95.92%), Query Frame = 0
BLAST of Cp4.1LG02g13230 vs. ExPASy TrEMBL
Match: A0A6J1K643 (protein ALP1-like OS=Cucurbita maxima OX=3661 GN=LOC111492660 PE=3 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 9.70e-21 Identity = 47/49 (95.92%), Postives = 47/49 (95.92%), Query Frame = 0
BLAST of Cp4.1LG02g13230 vs. ExPASy TrEMBL
Match: A0A6J1GBJ6 (protein ALP1-like OS=Cucurbita moschata OX=3662 GN=LOC111452471 PE=3 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 9.70e-21 Identity = 47/49 (95.92%), Postives = 47/49 (95.92%), Query Frame = 0
BLAST of Cp4.1LG02g13230 vs. ExPASy TrEMBL
Match: A0A5A7VJS1 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G001450 PE=4 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 1.07e-15 Identity = 47/90 (52.22%), Postives = 55/90 (61.11%), Query Frame = 0
BLAST of Cp4.1LG02g13230 vs. ExPASy TrEMBL
Match: A0A5A7SXL0 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43059G001000 PE=3 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 5.53e-15 Identity = 40/49 (81.63%), Postives = 43/49 (87.76%), Query Frame = 0
BLAST of Cp4.1LG02g13230 vs. ExPASy TrEMBL
Match: A0A5D3BNB9 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00830 PE=3 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 5.53e-15 Identity = 40/49 (81.63%), Postives = 43/49 (87.76%), Query Frame = 0
BLAST of Cp4.1LG02g13230 vs. TAIR 10
Match: AT3G55350.1 (PIF / Ping-Pong family of plant transposases ) HSP 1 Score: 41.6 bits (96), Expect = 3.2e-04 Identity = 25/64 (39.06%), Postives = 37/64 (57.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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