Cp4.1LG02g12900 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG02g12900
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Actin depolymerizing factor-like protein
Location	Cp4.1LG02: 11392599 .. 11394276 (-)
RNA-Seq Expression	Cp4.1LG02g12900
Synteny	Cp4.1LG02g12900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAGCCTCTTTTTCACCGATTCTTCTTCATTTGCTGATTTCTTTATCTTTTGCTTTTTCGTATTTTTTTTTCTTGATTTATAGTCTGTTTCTGTTCTTCTTGCTCTATCTTGATCTGTGATGCCTGGTAGATTTGATTTTCCGGGCCTGCGGGGTGTGGATCTGTATTATTCGATTTTTCTGATCCAGATCGTTTTAGTTTTCTTTTGTCCGATTTGCGCTGGATCGGTTTTGAATGATTTAGATTTCGTTTAGGATTGATTTCAGTAACATCGAAAATACTCGGAAATAGTTCGTTTCCTTGGATGTGATCGGGATTTTACTGATTGACGCCGTTCCTTAGTCATCCGAAATTGATAGTTTATATTTTTCTTTAGTTTGGTGTTTTCTTAGTGATTGAGATGATGTTTAGTGGTTGGTGGAAAGATGGCGATATTTTGCGTGTACTATCAGAATGGTAATATTGTGAAGTAGATCGAGTGCATGTGCTTGTTGAATATGGGGCCAATGATAATTGGTTGGCGGCAGCATAGTCAGTGGACCAAAGAAGCCCCCAACGGCCGAGGATAAATATAGGGAAGAATTGGAAATAAATTGGTTTTTGATATTTTTATTGTGATGCCCACTTTCAATTTTCAATATTACATCAAATCTCGAATGCTATAACCATCTTTTGAGAATCAAAATGTTATGCAATAGCCAATTGGCAACTCATCGATACCAACCAATGAATGTTATCTCTCATTGCGGAGGATTTGTGAAGAAGAAGAAGAATAGACTCTAAAAGGACCATGTGGAGATCATAATGATAATGGTGATGATCATGCCTCGCATGACATTCGGGGTCCCACATTGATTGGAGAAGGGAATGAGTGCCAGCGAGGATGCTGGATCACAAAGGGCGTGGATTGTGAGATCCCATATCGTTTGAGGAGAAGAACGAAACATTTTTTATAAGGGTGTGGAAATCTCTGCCTAACATGCACGTTTTAAAAACCTTGAGGGGAAGCTCGAAAGAGAAAACTCAAAGAAGACAATACCTGCTAGCGATGGGCTTGGTCGTTACGATAACCTTTATAAGTATTTGATTTTTCCTATGCCTAGTGTTCACATCTTTGAGTTCTTTCCTCTTAAGCTGTGTTATCATTTTCTTCCAAATTATCTTTCAGGCTAATGCGGCATCCGGTATGGCTGTACATGATGAATGTAAGCTTAAGTTCTTAGAGCTGAAAACCAAGAGAACTTACAGATACATTGTATATAAGATTGAAGAGAAGCAAAAGCAAGTGATTGTGGAAAAAGTTGGCGAGCCAAGTCAAAGCTATGAAGATTTCACAGCTTGTCTTCCTGCTGATGAATGCCGATACGCGGTTTATGATTTTGACTTCCTCACTAAAGAGAATGTCCAGAAGAGCAGAATTTTCTTCATTGCTTGGTAATGTTACGATCAAAAAAGAAAAAAAAAAAAAAACGTGTAGTTAGTTCTATCACTAATCATCACCATATTCTTTTGTTGTTGCAAAGGTCTCCGGACATATCAAAGGTAAGAAGCAAGATGATCTACGCAAGTTCAAAGGACAAGTTCAGGAGAGAATTGGATGGCATTCAAATTGAGCTGCAAGCTACTGACCCAACTGAAATGGGTCTCGATGTTTTCAACAGCCGGGCTAAATAA

mRNA sequence

ATGGCTAATGCGGCATCCGGTATGGCTGTACATGATGAATGTAAGCTTAAGTTCTTAGAGCTGAAAACCAAGAGAACTTACAGATACATTGTATATAAGATTGAAGAGAAGCAAAAGCAAGTGATTGTGGAAAAAGTTGGCGAGCCAAGTCAAAGCTATGAAGATTTCACAGCTTGTCTTCCTGCTGATGAATGCCGATACGCGGTTTATGATTTTGACTTCCTCACTAAAGAGAATGTCCAGAAGAGCAGAATTTTCTTCATTGCTTGGTCTCCGGACATATCAAAGGTAAGAAGCAAGATGATCTACGCAAGTTCAAAGGACAAGTTCAGGAGAGAATTGGATGGCATTCAAATTGAGCTGCAAGCTACTGACCCAACTGAAATGGGTCTCGATGTTTTCAACAGCCGGGCTAAATAA

Coding sequence (CDS)

ATGGCTAATGCGGCATCCGGTATGGCTGTACATGATGAATGTAAGCTTAAGTTCTTAGAGCTGAAAACCAAGAGAACTTACAGATACATTGTATATAAGATTGAAGAGAAGCAAAAGCAAGTGATTGTGGAAAAAGTTGGCGAGCCAAGTCAAAGCTATGAAGATTTCACAGCTTGTCTTCCTGCTGATGAATGCCGATACGCGGTTTATGATTTTGACTTCCTCACTAAAGAGAATGTCCAGAAGAGCAGAATTTTCTTCATTGCTTGGTCTCCGGACATATCAAAGGTAAGAAGCAAGATGATCTACGCAAGTTCAAAGGACAAGTTCAGGAGAGAATTGGATGGCATTCAAATTGAGCTGCAAGCTACTGACCCAACTGAAATGGGTCTCGATGTTTTCAACAGCCGGGCTAAATAA

Protein sequence

MANAASGMAVHDECKLKFLELKTKRTYRYIVYKIEEKQKQVIVEKVGEPSQSYEDFTACLPADECRYAVYDFDFLTKENVQKSRIFFIAWSPDISKVRSKMIYASSKDKFRRELDGIQIELQATDPTEMGLDVFNSRAK

Homology

[Close]

BLAST of Cp4.1LG02g12900 vs. ExPASy Swiss-Prot
Match: Q9FVI1 (Actin-depolymerizing factor 2 OS=Petunia hybrida OX=4102 GN=ADF2 PE=2 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 2.7e-65
Identity = 119/138 (86.23%), Postives = 133/138 (96.38%), Query Frame = 0


Query: 1   MANAASGMAVHDECKLKFLELKTKRTYRYIVYKIEEKQKQVIVEKVGEPSQSYEDFTACL 60
           MANAASGMAVHD+CKLKFLELK KRTYR+I+YKIEEKQK+V+VEK+GEP++SYEDFTA L
Sbjct: 1   MANAASGMAVHDDCKLKFLELKAKRTYRFIIYKIEEKQKEVVVEKLGEPTESYEDFTAGL 60

Query: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDISKVRSKMIYASSKDKFRRELDGIQIE 120
           PADECRYAVYDFDF+TKEN QKSRIFFIAWSPD ++VRSKMIYASSKD+F+RELDGIQ+E
Sbjct: 61  PADECRYAVYDFDFMTKENHQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVFNSRA 139
           LQATDPTEMGLDVF SRA
Sbjct: 121 LQATDPTEMGLDVFRSRA 138

[Close]

BLAST of Cp4.1LG02g12900 vs. ExPASy Swiss-Prot
Match: Q39250 (Actin-depolymerizing factor 1 OS=Arabidopsis thaliana OX=3702 GN=ADF1 PE=1 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 2.5e-63
Identity = 115/138 (83.33%), Postives = 130/138 (94.20%), Query Frame = 0


Query: 1   MANAASGMAVHDECKLKFLELKTKRTYRYIVYKIEEKQKQVIVEKVGEPSQSYEDFTACL 60
           MANAASGMAVHD+CKL+FLELK KRT+R+IVYKIEEKQKQV+VEKVG+P Q+YE+F ACL
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACL 60

Query: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDISKVRSKMIYASSKDKFRRELDGIQIE 120
           PADECRYA+YDFDF+T EN QKS+IFFIAW PDI+KVRSKMIYASSKD+F+RELDGIQ+E
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVFNSRA 139
           LQATDPTEM LDVF SRA
Sbjct: 121 LQATDPTEMDLDVFRSRA 138

[Close]

BLAST of Cp4.1LG02g12900 vs. ExPASy Swiss-Prot
Match: Q9FVI2 (Actin-depolymerizing factor 1 OS=Petunia hybrida OX=4102 GN=ADF1 PE=2 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 5.3e-61
Identity = 112/138 (81.16%), Postives = 127/138 (92.03%), Query Frame = 0


Query: 1   MANAASGMAVHDECKLKFLELKTKRTYRYIVYKIEEKQKQVIVEKVGEPSQSYEDFTACL 60
           MANAASGMAVHD+CKL+FLELK KRT+R+IVYKIEEKQKQV+VEK+GEP++SYEDF A L
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKIGEPTESYEDFAASL 60

Query: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDISKVRSKMIYASSKDKFRRELDGIQIE 120
           P +ECRYAVYDFDF+T EN QKSRIFFIAW PD ++VRSKMIYASSKD+F+RELDGIQ+E
Sbjct: 61  PENECRYAVYDFDFVTAENCQKSRIFFIAWCPDTARVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVFNSRA 139
           LQA DPTEMGLDV  SRA
Sbjct: 121 LQACDPTEMGLDVIQSRA 138

[Close]

BLAST of Cp4.1LG02g12900 vs. ExPASy Swiss-Prot
Match: Q9ZSK3 (Actin-depolymerizing factor 4 OS=Arabidopsis thaliana OX=3702 GN=ADF4 PE=1 SV=2)

HSP 1 Score: 235.0 bits (598), Expect = 5.3e-61
Identity = 113/137 (82.48%), Postives = 126/137 (91.97%), Query Frame = 0


Query: 1   MANAASGMAVHDECKLKFLELKTKRTYRYIVYKIEEKQKQVIVEKVGEPSQSYEDFTACL 60
           MANAASGMAVHD+CKL+FLELK KRT+R+IVYKIEEKQKQVIVEKVGEP  +YEDF A L
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASL 60

Query: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDISKVRSKMIYASSKDKFRRELDGIQIE 120
           PADECRYA+YDFDF+T EN QKS+IFFIAW PD++KVRSKMIYASSKD+F+RELDGIQ+E
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVFNSR 138
           LQATDPTEM LDV  SR
Sbjct: 121 LQATDPTEMDLDVLKSR 137

[Close]

BLAST of Cp4.1LG02g12900 vs. ExPASy Swiss-Prot
Match: Q9ZSK4 (Actin-depolymerizing factor 3 OS=Arabidopsis thaliana OX=3702 GN=ADF3 PE=1 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 1.3e-59
Identity = 108/138 (78.26%), Postives = 127/138 (92.03%), Query Frame = 0


Query: 1   MANAASGMAVHDECKLKFLELKTKRTYRYIVYKIEEKQKQVIVEKVGEPSQSYEDFTACL 60
           MANAASGMAVHD+CKLKF+ELKTKRT+R+I+YKIEE QKQVIVEK+GEP Q++ED  A L
Sbjct: 1   MANAASGMAVHDDCKLKFMELKTKRTHRFIIYKIEELQKQVIVEKIGEPGQTHEDLAASL 60

Query: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDISKVRSKMIYASSKDKFRRELDGIQIE 120
           PADECRYA++DFDF++ E V +SRIFF+AWSPD ++VRSKMIYASSKD+F+RELDGIQ+E
Sbjct: 61  PADECRYAIFDFDFVSSEGVPRSRIFFVAWSPDTARVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVFNSRA 139
           LQATDPTEM LDVF SRA
Sbjct: 121 LQATDPTEMDLDVFKSRA 138

[Close]

BLAST of Cp4.1LG02g12900 vs. NCBI nr
Match: XP_022948707.1 (actin-depolymerizing factor 2-like [Cucurbita moschata] >XP_023521573.1 actin-depolymerizing factor 2-like [Cucurbita pepo subsp. pepo] >XP_023523187.1 actin-depolymerizing factor 2-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023523188.1 actin-depolymerizing factor 2-like isoform X2 [Cucurbita pepo subsp. pepo] >KAG6607202.1 Actin-depolymerizing factor 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036888.1 Actin-depolymerizing factor 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 275 bits (704), Expect = 3.26e-93
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MANAASGMAVHDECKLKFLELKTKRTYRYIVYKIEEKQKQVIVEKVGEPSQSYEDFTACL 60
           MANAASGMAVHDECKLKFLELKTKRTYRYIVYKIEEKQKQVIVEKVGEPSQSYEDFTACL
Sbjct: 1   MANAASGMAVHDECKLKFLELKTKRTYRYIVYKIEEKQKQVIVEKVGEPSQSYEDFTACL 60

Query: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDISKVRSKMIYASSKDKFRRELDGIQIE 120
           PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDISKVRSKMIYASSKDKFRRELDGIQIE
Sbjct: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDISKVRSKMIYASSKDKFRRELDGIQIE 120

Query: 121 LQATDPTEMGLDVFNSRAK 139
           LQATDPTEMGLDVFNSRAK
Sbjct: 121 LQATDPTEMGLDVFNSRAK 139

[Close]

BLAST of Cp4.1LG02g12900 vs. NCBI nr
Match: XP_022997831.1 (actin-depolymerizing factor 2-like [Cucurbita maxima])

HSP 1 Score: 275 bits (703), Expect = 4.63e-93
Identity = 138/139 (99.28%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MANAASGMAVHDECKLKFLELKTKRTYRYIVYKIEEKQKQVIVEKVGEPSQSYEDFTACL 60
           MANAASGMAVHDECKLKFLELKTKRTYRYIVYKIEEKQKQVIVEKVGEPSQSYEDFTACL
Sbjct: 1   MANAASGMAVHDECKLKFLELKTKRTYRYIVYKIEEKQKQVIVEKVGEPSQSYEDFTACL 60

Query: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDISKVRSKMIYASSKDKFRRELDGIQIE 120
           PADECRYAVYDFDFLTKENVQKSRIFFIAWSPD+SKVRSKMIYASSKDKFRRELDGIQIE
Sbjct: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIE 120

Query: 121 LQATDPTEMGLDVFNSRAK 139
           LQATDPTEMGLDVFNSRAK
Sbjct: 121 LQATDPTEMGLDVFNSRAK 139

[Close]

BLAST of Cp4.1LG02g12900 vs. NCBI nr
Match: XP_022156171.1 (actin-depolymerizing factor 2 [Momordica charantia])

HSP 1 Score: 271 bits (694), Expect = 1.09e-91
Identity = 136/139 (97.84%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 1   MANAASGMAVHDECKLKFLELKTKRTYRYIVYKIEEKQKQVIVEKVGEPSQSYEDFTACL 60
           MANAASGMAVHD+CKLKFLELKTKRTYRYIVYKIEEKQKQVIVEK+GEP QSYEDFTACL
Sbjct: 1   MANAASGMAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVIVEKLGEPGQSYEDFTACL 60

Query: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDISKVRSKMIYASSKDKFRRELDGIQIE 120
           PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDISKVRSKMIYASSKDKFRRELDGIQIE
Sbjct: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDISKVRSKMIYASSKDKFRRELDGIQIE 120

Query: 121 LQATDPTEMGLDVFNSRAK 139
           LQATDPTEMGLDVFNSRAK
Sbjct: 121 LQATDPTEMGLDVFNSRAK 139

[Close]

BLAST of Cp4.1LG02g12900 vs. NCBI nr
Match: XP_022964654.1 (actin-depolymerizing factor 2-like [Cucurbita moschata] >XP_022970372.1 actin-depolymerizing factor 2-like [Cucurbita maxima] >XP_023519424.1 actin-depolymerizing factor 2-like [Cucurbita pepo subsp. pepo] >KAG6583469.1 Actin-depolymerizing factor 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019224.1 Actin-depolymerizing factor 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 264 bits (675), Expect = 8.64e-89
Identity = 132/139 (94.96%), Postives = 136/139 (97.84%), Query Frame = 0


Query: 1   MANAASGMAVHDECKLKFLELKTKRTYRYIVYKIEEKQKQVIVEKVGEPSQSYEDFTACL 60
           MANAASGMAVHD+CKLKFLELKTKRTYR+IVYKIEEKQKQVIVEKVGEP QSYEDFTACL
Sbjct: 1   MANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACL 60

Query: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDISKVRSKMIYASSKDKFRRELDGIQIE 120
           PADECRYAVYDFDFLTKENVQKSRIFFIAWSPD+SKVRSKMIYASSKDKFRRELDGIQIE
Sbjct: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIE 120

Query: 121 LQATDPTEMGLDVFNSRAK 139
           LQATDP+EM LDVF SRAK
Sbjct: 121 LQATDPSEMDLDVFKSRAK 139

[Close]

BLAST of Cp4.1LG02g12900 vs. NCBI nr
Match: XP_038894943.1 (actin-depolymerizing factor 2-like [Benincasa hispida])

HSP 1 Score: 255 bits (651), Expect = 3.95e-85
Identity = 127/139 (91.37%), Postives = 132/139 (94.96%), Query Frame = 0


Query: 1   MANAASGMAVHDECKLKFLELKTKRTYRYIVYKIEEKQKQVIVEKVGEPSQSYEDFTACL 60
           MANAASGMAVHD+CKLKFLELKTKRTYRYIVYKIEEKQKQV V+KVGEP Q YEDFTACL
Sbjct: 1   MANAASGMAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVTVDKVGEPGQGYEDFTACL 60

Query: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDISKVRSKMIYASSKDKFRRELDGIQIE 120
           PADECRYAVYDF+F+TKENV KSRIFFIAWSPD SKVRSKMIYASSKDKFRRELDGIQIE
Sbjct: 61  PADECRYAVYDFEFMTKENVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIE 120

Query: 121 LQATDPTEMGLDVFNSRAK 139
           LQATDP+EM LDVF SRAK
Sbjct: 121 LQATDPSEMDLDVFKSRAK 139

[Close]

BLAST of Cp4.1LG02g12900 vs. ExPASy TrEMBL
Match: A0A6J1GA03 (actin-depolymerizing factor 2-like OS=Cucurbita moschata OX=3662 GN=LOC111452299 PE=3 SV=1)

HSP 1 Score: 275 bits (704), Expect = 1.58e-93
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MANAASGMAVHDECKLKFLELKTKRTYRYIVYKIEEKQKQVIVEKVGEPSQSYEDFTACL 60
           MANAASGMAVHDECKLKFLELKTKRTYRYIVYKIEEKQKQVIVEKVGEPSQSYEDFTACL
Sbjct: 1   MANAASGMAVHDECKLKFLELKTKRTYRYIVYKIEEKQKQVIVEKVGEPSQSYEDFTACL 60

Query: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDISKVRSKMIYASSKDKFRRELDGIQIE 120
           PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDISKVRSKMIYASSKDKFRRELDGIQIE
Sbjct: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDISKVRSKMIYASSKDKFRRELDGIQIE 120

Query: 121 LQATDPTEMGLDVFNSRAK 139
           LQATDPTEMGLDVFNSRAK
Sbjct: 121 LQATDPTEMGLDVFNSRAK 139

[Close]

BLAST of Cp4.1LG02g12900 vs. ExPASy TrEMBL
Match: A0A6J1K8K8 (actin-depolymerizing factor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111492671 PE=3 SV=1)

HSP 1 Score: 275 bits (703), Expect = 2.24e-93
Identity = 138/139 (99.28%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MANAASGMAVHDECKLKFLELKTKRTYRYIVYKIEEKQKQVIVEKVGEPSQSYEDFTACL 60
           MANAASGMAVHDECKLKFLELKTKRTYRYIVYKIEEKQKQVIVEKVGEPSQSYEDFTACL
Sbjct: 1   MANAASGMAVHDECKLKFLELKTKRTYRYIVYKIEEKQKQVIVEKVGEPSQSYEDFTACL 60

Query: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDISKVRSKMIYASSKDKFRRELDGIQIE 120
           PADECRYAVYDFDFLTKENVQKSRIFFIAWSPD+SKVRSKMIYASSKDKFRRELDGIQIE
Sbjct: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIE 120

Query: 121 LQATDPTEMGLDVFNSRAK 139
           LQATDPTEMGLDVFNSRAK
Sbjct: 121 LQATDPTEMGLDVFNSRAK 139

[Close]

BLAST of Cp4.1LG02g12900 vs. ExPASy TrEMBL
Match: A0A6J1DU41 (actin-depolymerizing factor 2 OS=Momordica charantia OX=3673 GN=LOC111023124 PE=3 SV=1)

HSP 1 Score: 271 bits (694), Expect = 5.29e-92
Identity = 136/139 (97.84%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 1   MANAASGMAVHDECKLKFLELKTKRTYRYIVYKIEEKQKQVIVEKVGEPSQSYEDFTACL 60
           MANAASGMAVHD+CKLKFLELKTKRTYRYIVYKIEEKQKQVIVEK+GEP QSYEDFTACL
Sbjct: 1   MANAASGMAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVIVEKLGEPGQSYEDFTACL 60

Query: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDISKVRSKMIYASSKDKFRRELDGIQIE 120
           PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDISKVRSKMIYASSKDKFRRELDGIQIE
Sbjct: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDISKVRSKMIYASSKDKFRRELDGIQIE 120

Query: 121 LQATDPTEMGLDVFNSRAK 139
           LQATDPTEMGLDVFNSRAK
Sbjct: 121 LQATDPTEMGLDVFNSRAK 139

[Close]

BLAST of Cp4.1LG02g12900 vs. ExPASy TrEMBL
Match: A0A6J1HYW9 (actin-depolymerizing factor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111469374 PE=3 SV=1)

HSP 1 Score: 264 bits (675), Expect = 4.18e-89
Identity = 132/139 (94.96%), Postives = 136/139 (97.84%), Query Frame = 0


Query: 1   MANAASGMAVHDECKLKFLELKTKRTYRYIVYKIEEKQKQVIVEKVGEPSQSYEDFTACL 60
           MANAASGMAVHD+CKLKFLELKTKRTYR+IVYKIEEKQKQVIVEKVGEP QSYEDFTACL
Sbjct: 1   MANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACL 60

Query: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDISKVRSKMIYASSKDKFRRELDGIQIE 120
           PADECRYAVYDFDFLTKENVQKSRIFFIAWSPD+SKVRSKMIYASSKDKFRRELDGIQIE
Sbjct: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIE 120

Query: 121 LQATDPTEMGLDVFNSRAK 139
           LQATDP+EM LDVF SRAK
Sbjct: 121 LQATDPSEMDLDVFKSRAK 139

[Close]

BLAST of Cp4.1LG02g12900 vs. ExPASy TrEMBL
Match: A0A6J1HNW0 (actin-depolymerizing factor 2-like OS=Cucurbita moschata OX=3662 GN=LOC111464666 PE=3 SV=1)

HSP 1 Score: 264 bits (675), Expect = 4.18e-89
Identity = 132/139 (94.96%), Postives = 136/139 (97.84%), Query Frame = 0


Query: 1   MANAASGMAVHDECKLKFLELKTKRTYRYIVYKIEEKQKQVIVEKVGEPSQSYEDFTACL 60
           MANAASGMAVHD+CKLKFLELKTKRTYR+IVYKIEEKQKQVIVEKVGEP QSYEDFTACL
Sbjct: 1   MANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACL 60

Query: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDISKVRSKMIYASSKDKFRRELDGIQIE 120
           PADECRYAVYDFDFLTKENVQKSRIFFIAWSPD+SKVRSKMIYASSKDKFRRELDGIQIE
Sbjct: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIE 120

Query: 121 LQATDPTEMGLDVFNSRAK 139
           LQATDP+EM LDVF SRAK
Sbjct: 121 LQATDPSEMDLDVFKSRAK 139

[Close]

BLAST of Cp4.1LG02g12900 vs. TAIR 10
Match: AT3G46010.1 (actin depolymerizing factor 1 )

HSP 1 Score: 242.7 bits (618), Expect = 1.8e-64
Identity = 115/138 (83.33%), Postives = 130/138 (94.20%), Query Frame = 0


Query: 1   MANAASGMAVHDECKLKFLELKTKRTYRYIVYKIEEKQKQVIVEKVGEPSQSYEDFTACL 60
           MANAASGMAVHD+CKL+FLELK KRT+R+IVYKIEEKQKQV+VEKVG+P Q+YE+F ACL
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACL 60

Query: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDISKVRSKMIYASSKDKFRRELDGIQIE 120
           PADECRYA+YDFDF+T EN QKS+IFFIAW PDI+KVRSKMIYASSKD+F+RELDGIQ+E
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVFNSRA 139
           LQATDPTEM LDVF SRA
Sbjct: 121 LQATDPTEMDLDVFRSRA 138

[Close]

BLAST of Cp4.1LG02g12900 vs. TAIR 10
Match: AT3G46010.2 (actin depolymerizing factor 1 )

HSP 1 Score: 241.1 bits (614), Expect = 5.2e-64
Identity = 114/137 (83.21%), Postives = 129/137 (94.16%), Query Frame = 0


Query: 2   ANAASGMAVHDECKLKFLELKTKRTYRYIVYKIEEKQKQVIVEKVGEPSQSYEDFTACLP 61
           ANAASGMAVHD+CKL+FLELK KRT+R+IVYKIEEKQKQV+VEKVG+P Q+YE+F ACLP
Sbjct: 13  ANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLP 72

Query: 62  ADECRYAVYDFDFLTKENVQKSRIFFIAWSPDISKVRSKMIYASSKDKFRRELDGIQIEL 121
           ADECRYA+YDFDF+T EN QKS+IFFIAW PDI+KVRSKMIYASSKD+F+RELDGIQ+EL
Sbjct: 73  ADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVEL 132

Query: 122 QATDPTEMGLDVFNSRA 139
           QATDPTEM LDVF SRA
Sbjct: 133 QATDPTEMDLDVFRSRA 149

[Close]

BLAST of Cp4.1LG02g12900 vs. TAIR 10
Match: AT5G59890.1 (actin depolymerizing factor 4 )

HSP 1 Score: 235.0 bits (598), Expect = 3.8e-62
Identity = 113/137 (82.48%), Postives = 126/137 (91.97%), Query Frame = 0


Query: 1   MANAASGMAVHDECKLKFLELKTKRTYRYIVYKIEEKQKQVIVEKVGEPSQSYEDFTACL 60
           MANAASGMAVHD+CKL+FLELK KRT+R+IVYKIEEKQKQVIVEKVGEP  +YEDF A L
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASL 60

Query: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDISKVRSKMIYASSKDKFRRELDGIQIE 120
           PADECRYA+YDFDF+T EN QKS+IFFIAW PD++KVRSKMIYASSKD+F+RELDGIQ+E
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVFNSR 138
           LQATDPTEM LDV  SR
Sbjct: 121 LQATDPTEMDLDVLKSR 137

[Close]

BLAST of Cp4.1LG02g12900 vs. TAIR 10
Match: AT5G59880.1 (actin depolymerizing factor 3 )

HSP 1 Score: 230.3 bits (586), Expect = 9.2e-61
Identity = 108/138 (78.26%), Postives = 127/138 (92.03%), Query Frame = 0


Query: 1   MANAASGMAVHDECKLKFLELKTKRTYRYIVYKIEEKQKQVIVEKVGEPSQSYEDFTACL 60
           MANAASGMAVHD+CKLKF+ELKTKRT+R+I+YKIEE QKQVIVEK+GEP Q++ED  A L
Sbjct: 1   MANAASGMAVHDDCKLKFMELKTKRTHRFIIYKIEELQKQVIVEKIGEPGQTHEDLAASL 60

Query: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDISKVRSKMIYASSKDKFRRELDGIQIE 120
           PADECRYA++DFDF++ E V +SRIFF+AWSPD ++VRSKMIYASSKD+F+RELDGIQ+E
Sbjct: 61  PADECRYAIFDFDFVSSEGVPRSRIFFVAWSPDTARVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVFNSRA 139
           LQATDPTEM LDVF SRA
Sbjct: 121 LQATDPTEMDLDVFKSRA 138

[Close]

BLAST of Cp4.1LG02g12900 vs. TAIR 10
Match: AT3G46000.1 (actin depolymerizing factor 2 )

HSP 1 Score: 227.6 bits (579), Expect = 6.0e-60
Identity = 110/137 (80.29%), Postives = 124/137 (90.51%), Query Frame = 0


Query: 1   MANAASGMAVHDECKLKFLELKTKRTYRYIVYKIEEKQKQVIVEKVGEPSQSYEDFTACL 60
           MANAASGMAVHD+CKLKF+ELK KRT+R IVYKIE+  KQVIVEK+GEP QSY+DF A L
Sbjct: 1   MANAASGMAVHDDCKLKFMELKAKRTFRTIVYKIED--KQVIVEKLGEPEQSYDDFAASL 60

Query: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDISKVRSKMIYASSKDKFRRELDGIQIE 120
           PAD+CRY +YDFDF+T EN QKS+IFFIAWSPD +KVR KMIYASSKD+F+RELDGIQ+E
Sbjct: 61  PADDCRYCIYDFDFVTAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVFNSR 138
           LQATDPTEMGLDVF SR
Sbjct: 121 LQATDPTEMGLDVFKSR 135

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g12900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FVI1	2.7e-65	86.23	Actin-depolymerizing factor 2 OS=Petunia hybrida OX=4102 GN=ADF2 PE=2 SV=1	[more]
Q39250	2.5e-63	83.33	Actin-depolymerizing factor 1 OS=Arabidopsis thaliana OX=3702 GN=ADF1 PE=1 SV=1	[more]
Q9FVI2	5.3e-61	81.16	Actin-depolymerizing factor 1 OS=Petunia hybrida OX=4102 GN=ADF1 PE=2 SV=1	[more]
Q9ZSK3	5.3e-61	82.48	Actin-depolymerizing factor 4 OS=Arabidopsis thaliana OX=3702 GN=ADF4 PE=1 SV=2	[more]
Q9ZSK4	1.3e-59	78.26	Actin-depolymerizing factor 3 OS=Arabidopsis thaliana OX=3702 GN=ADF3 PE=1 SV=1	[more]

BLAST of Cp4.1LG02g12900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022948707.1	3.26e-93	100.00	actin-depolymerizing factor 2-like [Cucurbita moschata] >XP_023521573.1 actin-de...	[more]
XP_022997831.1	4.63e-93	99.28	actin-depolymerizing factor 2-like [Cucurbita maxima]	[more]
XP_022156171.1	1.09e-91	97.84	actin-depolymerizing factor 2 [Momordica charantia]	[more]
XP_022964654.1	8.64e-89	94.96	actin-depolymerizing factor 2-like [Cucurbita moschata] >XP_022970372.1 actin-de...	[more]
XP_038894943.1	3.95e-85	91.37	actin-depolymerizing factor 2-like [Benincasa hispida]	[more]

BLAST of Cp4.1LG02g12900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GA03	1.58e-93	100.00	actin-depolymerizing factor 2-like OS=Cucurbita moschata OX=3662 GN=LOC111452299...	[more]
A0A6J1K8K8	2.24e-93	99.28	actin-depolymerizing factor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111492671 P...	[more]
A0A6J1DU41	5.29e-92	97.84	actin-depolymerizing factor 2 OS=Momordica charantia OX=3673 GN=LOC111023124 PE=...	[more]
A0A6J1HYW9	4.18e-89	94.96	actin-depolymerizing factor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111469374 P...	[more]
A0A6J1HNW0	4.18e-89	94.96	actin-depolymerizing factor 2-like OS=Cucurbita moschata OX=3662 GN=LOC111464666...	[more]

BLAST of Cp4.1LG02g12900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G46010.1	1.8e-64	83.33	actin depolymerizing factor 1	[more]
AT3G46010.2	5.2e-64	83.21	actin depolymerizing factor 1	[more]
AT5G59890.1	3.8e-62	82.48	actin depolymerizing factor 4	[more]
AT5G59880.1	9.2e-61	78.26	actin depolymerizing factor 3	[more]
AT3G46000.1	6.0e-60	80.29	actin depolymerizing factor 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002108	Actin-depolymerising factor homology domain	SMART	SM00102	adf_2	coord: 12..139 e-value: 1.1E-55 score: 201.0
IPR002108	Actin-depolymerising factor homology domain	PFAM	PF00241	Cofilin_ADF	coord: 14..134 e-value: 8.5E-36 score: 122.5
IPR002108	Actin-depolymerising factor homology domain	PROSITE	PS51263	ADF_H	coord: 5..139 score: 36.71463
IPR029006	ADF-H/Gelsolin-like domain superfamily	GENE3D	3.40.20.10	Severin	coord: 1..139 e-value: 1.3E-51 score: 175.8
IPR017904	ADF/Cofilin	PANTHER	PTHR11913	COFILIN-RELATED	coord: 1..138
IPR017904	ADF/Cofilin	CDD	cd11286	ADF_cofilin_like	coord: 6..138 e-value: 7.21602E-64 score: 189.305
None	No IPR available	PANTHER	PTHR11913:SF74	ACTIN-DEPOLYMERIZING FACTOR 2-LIKE	coord: 1..138
None	No IPR available	SUPERFAMILY	55753	Actin depolymerizing proteins	coord: 2..137

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG02g12900.1	Cp4.1LG02g12900.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030042	actin filament depolymerization
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0003779	actin binding