Cp4.1LG02g12350 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG02g12350
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	RING-type domain-containing protein
Location	Cp4.1LG02: 11968725 .. 11971575 (+)
RNA-Seq Expression	Cp4.1LG02g12350
Synteny	Cp4.1LG02g12350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGTTCTTTGATTTTCACCTGGTGAATTTGTTGTGTATTTTCAGTAATCTTGCGGTTTCTGCGAGGATTTTAGGGATTTTTTTTGTTCTTTGCGTGTTTGTTCTTATTGTTCTGCCTTTTTTAGGGGATTTGATTTGAATTCTTTTGTGCGGTTTATGCAATTAATGGATATTTGTAATGTAATGTTAACGCGTTTAGGTTAATTTTGTATCTGATGAGGCTAATTGTATAGTACTTGGCCTCCAATCGATCGTCTCTAGGGCGTTATTTCTCAACCTATTTTGCCATTTTCTTGCTGCATCTATGGTTTATTTAGGCCTTGTTTTATAACAATTTTGTTTTTAGTTTTCTGTTTCTGAACATTGTGTGCTTGTTTCGTCTATGGTTTTCTTTCACCTCTGGTAAAGGAAAGTTTTGAATTCATAGCCAAATTTTAAGCTACTTTTTTAGTTTTAAAAACTTTGCTTGAGTTTTGAAAATACTTTTAAAAGTAGATAACGAACAAAAAAGCTCATGTGTGAAAGTGGTGTTTATAACTCTAATACTCAAAAATTAAGGCCCCATTTGTTAACCATTTGGTTTTTGAAAATTATTCTTGTTTTCTTTTCATTTCTTTATCATGGATTCATCTTTCTTAAGAAAATATTTGAGTTCTTAGCTAAATTCCAACAACAAAAACAAGTTTTTGTTAACTATTTTTTTTAGTTATCAAAATTTGGAAGGTAGATAACAAGACAAGAAAACCCGGGAAAGTTTTTTTAGTTATCAAAATATAGGCTTAATTTTCATAAACCAAGAATAAAAAATCAAAACCTAAATGGTTATCGAGCGGGGTGCCTTAATGTTTTTGGTCCTTTAGAGGTAACCCGTCTCTTTTGTGGATTTACAGGTTTCCTTATTATATTAGGCTGGGTATAGTATTATAAATAAGTTGATAATGGAAACTTTAAAAATTAGAGTTTTTGTTAGAGATTGCGGAGAAAACTGAATACTCTTTCAGAATATTTCTTGCCCATCTCTAGCACCGAGGCGGGAGCGCCTCAAGCAGTCTTATTTGAAGCCAGGCTTCCAGTGTCGGTTTTTCTGTGAAACACATAGGCGTGCTTTTGAAAACAGTGAGGACAGGTAGGGAAATCTTTCGAGGTCCTTCTTAAGACTGTTTTCTAAGTTCTATTTCTCTACTTTATATTGGTTACTCGTGTAAATTAGAAAAAAAGAAGTTTGATTCTTTACACGCCTTTCCTCCATAGCGTTGCACCTTTTCCTTGTTACATGATTTTCCTACAATCTTAGTCAAGCATTCATCCATCATTCACTATCGATGAAATTAATCCAACTTTCTCAAATATTATACATCGTTCGACTCAAATTAATGGTACATATGATATCTATGTACCTTGTCTCGTGATGTCAGGTACAGTCCTTGTTGATTTAGTTGATTTTTTCTCCATTTTTCCTTTTACCTTTAAGACTCAACTCTTAGATAAAGCATAATTGACTCATTTGGCATGAAGTTAATTGCTAATATGCCTTGGTAAACTGCAACTTCAGCTACTATTGCAGGTGGTCGTTTCTGACCCGTAGCTGTGTGTTGTTAGAATGTGGAATTTTGCTTCCAATTGTGTGGCTGGATGTACTGGACTAAAGAGCGGCTCCCAAAAACCGACTCATACCGCCACAGAGTGTTCTGATGATGAGGTATCTTCAGATGGTAGGGAGGAGGTGCTAGAGTGTCCAATATGCTGGGAATCCTTCAACATTGTTGAGAATGTGCCCCATGTTTTATGGTGTGGCCATACTCTCTGCAAGAATTGCATCTTGGGATTGCAGTGGGCTGTGGTGAAGTTCCCGACATTACCCGTTCAGCTTCCGCTTTTCATATCCTGCCCATGGTGCAACCTCCTATCCTTCCGCCTAGTTTATAAAGGAAACCTCAAATTCCCTTGCAAGAATTACTTCCTTTTGTGGATGGTTGAGAACATGAACGGTGAAAGGGTGAAATCTCGTTCTGATTTCTCTGGGGATCAACTAGTCTTCCCCGTGAGCGGAAATTCAAGGAGTAATCAAGTCGGTCACAGTAACCTTAGAAGGGGACACCATGTTCGTCAATTAGATCCACAACGACCAAACAACGCCAATAGCCATGCCCATAGCTTTAATCTGGAGAGACTGAAATCTTCTCTCTGCAAATTGCTCGTGTTCTTCGTTCACTTGACAGCTAAATTTCCACTGGTGATCATCTTCCTCCTGATCATCCTATACGCCGTGCCTGCCAGTGCAGCAATCTTGGCTCTGTACATATTAGTCACCGTCCTTTTCGCTCTCCCGTCGTTTCTAATATTGTATTTTGCATACCCCAGTCTGGATTGGCTGATGAGGGAGATCATCACTTAAGGTGCGTACCACAAGTCAGCCTGAATTGTGTCTGGTGGAGGCCATCACTCCAGGACTTTTACTTCTACAAACCAGCCACAGGCATCAAGATAGACGACTTCATATCTTAGCTAGTCGACACATTAGCTTCCCGCTTCCCGTCCCAATTTGCCGACATTTCAGCAGGATTGTTCAGATTCAACATCGCTCTCCAGCAATCATGGATGATCCTTGCAGCCCCAGGTAAAATAAGTTTTGTTTTGGCTTAGTGTCCCATTTTCTTTCCCTAAAAACTCTTCTTGTGTAAGGGCGTACAAGTTTGAACTTGGTAATTTCTGGTGTCCTCTTGTGGCTTTTGTGTGCCACATTCACTGGCATTGTGCCATAGATATCTGGAAAATAGGTGCTGCTGTATGGACAAGGCTATAAGAAGCTCATGTCCTTGTTTCACTGCTTGTACAGAGGATTGGAGTAA

mRNA sequence

ATGTTATTGCGGAGAAAACTGAATACTCTTTCAGAATATTTCTTGCCCATCTCTAGCACCGAGGCGGGAGCGCCTCAAGCAGTCTTATTTGAAGCCAGGCTTCCAGTGTCGCTGTGTGTTGTTAGAATGTGGAATTTTGCTTCCAATTGTGTGGCTGGATGTACTGGACTAAAGAGCGGCTCCCAAAAACCGACTCATACCGCCACAGAGTGTTCTGATGATGAGGTATCTTCAGATGGTAGGGAGGAGGTGCTAGAGTGTCCAATATGCTGGGAATCCTTCAACATTGTTGAGAATGTGCCCCATGTTTTATGGTGTGGCCATACTCTCTGCAAGAATTGCATCTTGGGATTGCAGTGGGCTGTGGTGAAGTTCCCGACATTACCCGTTCAGCTTCCGCTTTTCATATCCTGCCCATGGTGCAACCTCCTATCCTTCCGCCTAGTTTATAAAGGAAACCTCAAATTCCCTTGCAAGAATTACTTCCTTTTGTGGATGGTTGAGAACATGAACGGTGAAAGGGTGAAATCTCGTTCTGATTTCTCTGGGGATCAACTAGTCTTCCCCGTGAGCGGAAATTCAAGGAGTAATCAAGTCGGTCACAGTAACCTTAGAAGGGGACACCATGTTCGTCAATTAGATCCACAACGACCAAACAACGCCAATAGCCATGCCCATAGCTTTAATCTGGAGAGACTGAAATCTTCTCTCTGCAAATTGCTCGTGTTCTTCGTTCACTTGACAGCTAAATTTCCACTGTCTGGATTGGCTGATGAGGGAGATCATCACTTAAGGCATCAAGATAGACGACTTCATATCTTAGCTAGTCGACACATTAGCTTCCCGCTTCCCGTCCCAATTTGCCGACATTTCAGCAGGATTGTTCAGATTCAACATCGCTCTCCAGCAATCATGGATGATCCTTGCAGCCCCAGAGGATTGGAGTAA

Coding sequence (CDS)

ATGTTATTGCGGAGAAAACTGAATACTCTTTCAGAATATTTCTTGCCCATCTCTAGCACCGAGGCGGGAGCGCCTCAAGCAGTCTTATTTGAAGCCAGGCTTCCAGTGTCGCTGTGTGTTGTTAGAATGTGGAATTTTGCTTCCAATTGTGTGGCTGGATGTACTGGACTAAAGAGCGGCTCCCAAAAACCGACTCATACCGCCACAGAGTGTTCTGATGATGAGGTATCTTCAGATGGTAGGGAGGAGGTGCTAGAGTGTCCAATATGCTGGGAATCCTTCAACATTGTTGAGAATGTGCCCCATGTTTTATGGTGTGGCCATACTCTCTGCAAGAATTGCATCTTGGGATTGCAGTGGGCTGTGGTGAAGTTCCCGACATTACCCGTTCAGCTTCCGCTTTTCATATCCTGCCCATGGTGCAACCTCCTATCCTTCCGCCTAGTTTATAAAGGAAACCTCAAATTCCCTTGCAAGAATTACTTCCTTTTGTGGATGGTTGAGAACATGAACGGTGAAAGGGTGAAATCTCGTTCTGATTTCTCTGGGGATCAACTAGTCTTCCCCGTGAGCGGAAATTCAAGGAGTAATCAAGTCGGTCACAGTAACCTTAGAAGGGGACACCATGTTCGTCAATTAGATCCACAACGACCAAACAACGCCAATAGCCATGCCCATAGCTTTAATCTGGAGAGACTGAAATCTTCTCTCTGCAAATTGCTCGTGTTCTTCGTTCACTTGACAGCTAAATTTCCACTGTCTGGATTGGCTGATGAGGGAGATCATCACTTAAGGCATCAAGATAGACGACTTCATATCTTAGCTAGTCGACACATTAGCTTCCCGCTTCCCGTCCCAATTTGCCGACATTTCAGCAGGATTGTTCAGATTCAACATCGCTCTCCAGCAATCATGGATGATCCTTGCAGCCCCAGAGGATTGGAGTAA

Protein sequence

MLLRRKLNTLSEYFLPISSTEAGAPQAVLFEARLPVSLCVVRMWNFASNCVAGCTGLKSGSQKPTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPHVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYFLLWMVENMNGERVKSRSDFSGDQLVFPVSGNSRSNQVGHSNLRRGHHVRQLDPQRPNNANSHAHSFNLERLKSSLCKLLVFFVHLTAKFPLSGLADEGDHHLRHQDRRLHILASRHISFPLPVPICRHFSRIVQIQHRSPAIMDDPCSPRGLE

Homology

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BLAST of Cp4.1LG02g12350 vs. ExPASy Swiss-Prot
Match: Q13049 (E3 ubiquitin-protein ligase TRIM32 OS=Homo sapiens OX=9606 GN=TRIM32 PE=1 SV=2)

HSP 1 Score: 50.8 bits (120), Expect = 3.2e-05
Identity = 24/67 (35.82%), Postives = 36/67 (53.73%), Query Frame = 0


Query: 79  DGREEVLECPICWESFNIVENVPHVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISC 138
           D   EVLECPIC ESF   +  P +L CGHT+C+ C+  L  + +            + C
Sbjct: 12  DALREVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN----------GVRC 68

Query: 139 PWCNLLS 146
           P+C+ ++
Sbjct: 72  PFCSKIT 68

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BLAST of Cp4.1LG02g12350 vs. ExPASy Swiss-Prot
Match: Q8CH72 (E3 ubiquitin-protein ligase TRIM32 OS=Mus musculus OX=10090 GN=Trim32 PE=1 SV=2)

HSP 1 Score: 50.8 bits (120), Expect = 3.2e-05
Identity = 25/78 (32.05%), Postives = 40/78 (51.28%), Query Frame = 0


Query: 68  ATECSDDEVSSDGREEVLECPICWESFNIVENVPHVLWCGHTLCKNCILGLQWAVVKFPT 127
           A   +   ++ D   EVLECPIC ESF   +  P +L CGHT+C+ C+  L  + +    
Sbjct: 2   AAAAAASHLNLDALREVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSIN--- 61

Query: 128 LPVQLPLFISCPWCNLLS 146
                   + CP+C+ ++
Sbjct: 62  -------GVRCPFCSKIT 69

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BLAST of Cp4.1LG02g12350 vs. ExPASy Swiss-Prot
Match: Q9H0X6 (RING finger protein 208 OS=Homo sapiens OX=9606 GN=RNF208 PE=1 SV=2)

HSP 1 Score: 50.1 bits (118), Expect = 5.5e-05
Identity = 26/70 (37.14%), Postives = 35/70 (50.00%), Query Frame = 0


Query: 72  SDDEVSSDGREEVLECPICWESFNIVENVPHVLWCGHTLCKNCILGLQWAVVKFPTLPVQ 131
           S    SS    E LECP C  S+N+ +  P VL C H++C+ C+  L  +  K+      
Sbjct: 128 SASAASSAAAGEPLECPTCGHSYNVTQRRPRVLSCLHSVCEQCLQILYESCPKYK----- 187

Query: 132 LPLFISCPWC 142
              FISCP C
Sbjct: 188 ---FISCPTC 189

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BLAST of Cp4.1LG02g12350 vs. ExPASy Swiss-Prot
Match: Q8K0W3 (RING finger protein 208 OS=Mus musculus OX=10090 GN=Rnf208 PE=1 SV=2)

HSP 1 Score: 48.5 bits (114), Expect = 1.6e-04
Identity = 26/79 (32.91%), Postives = 40/79 (50.63%), Query Frame = 0


Query: 64  PTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPHVLWCGHTLCKNCILGLQWAVV 123
           PT +A   S   ++     E LECP C  ++N+ +  P VL C H++C+ C+  L  +  
Sbjct: 128 PTASAPSSSGPVIAG----EPLECPTCGHTYNVTQRRPRVLSCLHSVCEQCLQILYESCP 187

Query: 124 KFPTLPVQLPLFISCPWCN 143
           K+         FISCP C+
Sbjct: 188 KYK--------FISCPTCH 194

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BLAST of Cp4.1LG02g12350 vs. NCBI nr
Match: KAG6607114.1 (hypothetical protein SDJN03_00456, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 458 bits (1179), Expect = 3.26e-159
Identity = 228/284 (80.28%), Postives = 230/284 (80.99%), Query Frame = 0


Query: 43  MWNFASNCVAGCTGLKSGSQKPTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPH 102
           MWNFASNCVAGCTGLKS SQKPTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPH
Sbjct: 1   MWNFASNCVAGCTGLKSSSQKPTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPH 60

Query: 103 VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 162
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120

Query: 163 LLWMVENMNGERVKSRSDFSGDQLVFPVSGNSRSNQVGHSNLRRGHHVRQLDPQRPNNAN 222
           LLWMVENMNGERVKSRSDFSGDQLVFPVSGNSRSNQVGHSNLRRGHHVRQLDPQRPNN N
Sbjct: 121 LLWMVENMNGERVKSRSDFSGDQLVFPVSGNSRSNQVGHSNLRRGHHVRQLDPQRPNNTN 180

Query: 223 SHAHSFNLERLKSSLCKLLVFFVHLTAKFPL----------------------------- 282
           SHAHSFNLERLKSSLCKLLVFFVHLTAKFPL                             
Sbjct: 181 SHAHSFNLERLKSSLCKLLVFFVHLTAKFPLVIIFLLIILYAVPASAAILALYILVTVLF 240

Query: 283 -------------SGLADEGDHHLRHQDRRLHILASRHISFPLP 284
                          L  +  H   HQD RLHILASRH+SFPLP
Sbjct: 241 ALPSFLILYFAYPRLLLLQTSH--SHQDSRLHILASRHVSFPLP 282

[Close]

BLAST of Cp4.1LG02g12350 vs. NCBI nr
Match: XP_023523716.1 (uncharacterized protein LOC111787870 [Cucurbita pepo subsp. pepo] >XP_023523718.1 uncharacterized protein LOC111787870 [Cucurbita pepo subsp. pepo] >XP_023523719.1 uncharacterized protein LOC111787870 [Cucurbita pepo subsp. pepo] >XP_023523720.1 uncharacterized protein LOC111787870 [Cucurbita pepo subsp. pepo] >XP_023523721.1 uncharacterized protein LOC111787870 [Cucurbita pepo subsp. pepo] >XP_023523722.1 uncharacterized protein LOC111787870 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 451 bits (1159), Expect = 1.38e-157
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 43  MWNFASNCVAGCTGLKSGSQKPTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPH 102
           MWNFASNCVAGCTGLKSGSQKPTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPH
Sbjct: 1   MWNFASNCVAGCTGLKSGSQKPTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPH 60

Query: 103 VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 162
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120

Query: 163 LLWMVENMNGERVKSRSDFSGDQLVFPVSGNSRSNQVGHSNLRRGHHVRQLDPQRPNNAN 222
           LLWMVENMNGERVKSRSDFSGDQLVFPVSGNSRSNQVGHSNLRRGHHVRQLDPQRPNNAN
Sbjct: 121 LLWMVENMNGERVKSRSDFSGDQLVFPVSGNSRSNQVGHSNLRRGHHVRQLDPQRPNNAN 180

Query: 223 SHAHSFNLERLKSSLCKLLVFFVHLTAKFPL 253
           SHAHSFNLERLKSSLCKLLVFFVHLTAKFPL
Sbjct: 181 SHAHSFNLERLKSSLCKLLVFFVHLTAKFPL 211

[Close]

BLAST of Cp4.1LG02g12350 vs. NCBI nr
Match: KAG7036804.1 (hypothetical protein SDJN02_00424, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 447 bits (1149), Expect = 4.61e-156
Identity = 209/211 (99.05%), Postives = 209/211 (99.05%), Query Frame = 0


Query: 43  MWNFASNCVAGCTGLKSGSQKPTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPH 102
           MWNFASNCVAGCTGLKS SQKPTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPH
Sbjct: 1   MWNFASNCVAGCTGLKSSSQKPTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPH 60

Query: 103 VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 162
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120

Query: 163 LLWMVENMNGERVKSRSDFSGDQLVFPVSGNSRSNQVGHSNLRRGHHVRQLDPQRPNNAN 222
           LLWMVENMNGERVKSRSDFSGDQLVFPVSGNSRSNQVGHSNLRRGHHVRQLDPQRPNN N
Sbjct: 121 LLWMVENMNGERVKSRSDFSGDQLVFPVSGNSRSNQVGHSNLRRGHHVRQLDPQRPNNTN 180

Query: 223 SHAHSFNLERLKSSLCKLLVFFVHLTAKFPL 253
           SHAHSFNLERLKSSLCKLLVFFVHLTAKFPL
Sbjct: 181 SHAHSFNLERLKSSLCKLLVFFVHLTAKFPL 211

[Close]

BLAST of Cp4.1LG02g12350 vs. NCBI nr
Match: XP_022949151.1 (uncharacterized protein LOC111452589 [Cucurbita moschata] >XP_022949153.1 uncharacterized protein LOC111452589 [Cucurbita moschata] >XP_022949154.1 uncharacterized protein LOC111452589 [Cucurbita moschata] >XP_022949155.1 uncharacterized protein LOC111452589 [Cucurbita moschata] >XP_022949156.1 uncharacterized protein LOC111452589 [Cucurbita moschata] >XP_022949157.1 uncharacterized protein LOC111452589 [Cucurbita moschata])

HSP 1 Score: 444 bits (1143), Expect = 3.77e-155
Identity = 209/211 (99.05%), Postives = 209/211 (99.05%), Query Frame = 0


Query: 43  MWNFASNCVAGCTGLKSGSQKPTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPH 102
           MWNFASNCVAGCTGLKS SQK THTATECSDDEVSSDGREEVLECPICWESFNIVENVPH
Sbjct: 1   MWNFASNCVAGCTGLKSSSQKLTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPH 60

Query: 103 VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 162
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120

Query: 163 LLWMVENMNGERVKSRSDFSGDQLVFPVSGNSRSNQVGHSNLRRGHHVRQLDPQRPNNAN 222
           LLWMVENMNGERVKSRSDFSGDQLVFPVSGNSRSNQVGHSNLRRGHHVRQLDPQRPNNAN
Sbjct: 121 LLWMVENMNGERVKSRSDFSGDQLVFPVSGNSRSNQVGHSNLRRGHHVRQLDPQRPNNAN 180

Query: 223 SHAHSFNLERLKSSLCKLLVFFVHLTAKFPL 253
           SHAHSFNLERLKSSLCKLLVFFVHLTAKFPL
Sbjct: 181 SHAHSFNLERLKSSLCKLLVFFVHLTAKFPL 211

[Close]

BLAST of Cp4.1LG02g12350 vs. NCBI nr
Match: XP_022998137.1 (uncharacterized protein LOC111492874 [Cucurbita maxima] >XP_022998138.1 uncharacterized protein LOC111492874 [Cucurbita maxima] >XP_022998139.1 uncharacterized protein LOC111492874 [Cucurbita maxima] >XP_022998140.1 uncharacterized protein LOC111492874 [Cucurbita maxima] >XP_022998141.1 uncharacterized protein LOC111492874 [Cucurbita maxima])

HSP 1 Score: 444 bits (1141), Expect = 7.61e-155
Identity = 209/211 (99.05%), Postives = 209/211 (99.05%), Query Frame = 0


Query: 43  MWNFASNCVAGCTGLKSGSQKPTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPH 102
           MWNFASNCVAGCTGLKSGSQKPTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPH
Sbjct: 1   MWNFASNCVAGCTGLKSGSQKPTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPH 60

Query: 103 VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 162
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120

Query: 163 LLWMVENMNGERVKSRSDFSGDQLVFPVSGNSRSNQVGHSNLRRGHHVRQLDPQRPNNAN 222
           LLWMVENMNGERVKSRSDFSGDQLVFPVSGNSRSNQVGHSNLRRGHHVRQLD QR NNAN
Sbjct: 121 LLWMVENMNGERVKSRSDFSGDQLVFPVSGNSRSNQVGHSNLRRGHHVRQLDLQRSNNAN 180

Query: 223 SHAHSFNLERLKSSLCKLLVFFVHLTAKFPL 253
           SHAHSFNLERLKSSLCKLLVFFVHLTAKFPL
Sbjct: 181 SHAHSFNLERLKSSLCKLLVFFVHLTAKFPL 211

[Close]

BLAST of Cp4.1LG02g12350 vs. ExPASy TrEMBL
Match: A0A6J1GC00 (uncharacterized protein LOC111452589 OS=Cucurbita moschata OX=3662 GN=LOC111452589 PE=4 SV=1)

HSP 1 Score: 444 bits (1143), Expect = 1.83e-155
Identity = 209/211 (99.05%), Postives = 209/211 (99.05%), Query Frame = 0


Query: 43  MWNFASNCVAGCTGLKSGSQKPTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPH 102
           MWNFASNCVAGCTGLKS SQK THTATECSDDEVSSDGREEVLECPICWESFNIVENVPH
Sbjct: 1   MWNFASNCVAGCTGLKSSSQKLTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPH 60

Query: 103 VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 162
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120

Query: 163 LLWMVENMNGERVKSRSDFSGDQLVFPVSGNSRSNQVGHSNLRRGHHVRQLDPQRPNNAN 222
           LLWMVENMNGERVKSRSDFSGDQLVFPVSGNSRSNQVGHSNLRRGHHVRQLDPQRPNNAN
Sbjct: 121 LLWMVENMNGERVKSRSDFSGDQLVFPVSGNSRSNQVGHSNLRRGHHVRQLDPQRPNNAN 180

Query: 223 SHAHSFNLERLKSSLCKLLVFFVHLTAKFPL 253
           SHAHSFNLERLKSSLCKLLVFFVHLTAKFPL
Sbjct: 181 SHAHSFNLERLKSSLCKLLVFFVHLTAKFPL 211

[Close]

BLAST of Cp4.1LG02g12350 vs. ExPASy TrEMBL
Match: A0A6J1K9F8 (uncharacterized protein LOC111492874 OS=Cucurbita maxima OX=3661 GN=LOC111492874 PE=4 SV=1)

HSP 1 Score: 444 bits (1141), Expect = 3.68e-155
Identity = 209/211 (99.05%), Postives = 209/211 (99.05%), Query Frame = 0


Query: 43  MWNFASNCVAGCTGLKSGSQKPTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPH 102
           MWNFASNCVAGCTGLKSGSQKPTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPH
Sbjct: 1   MWNFASNCVAGCTGLKSGSQKPTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPH 60

Query: 103 VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 162
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120

Query: 163 LLWMVENMNGERVKSRSDFSGDQLVFPVSGNSRSNQVGHSNLRRGHHVRQLDPQRPNNAN 222
           LLWMVENMNGERVKSRSDFSGDQLVFPVSGNSRSNQVGHSNLRRGHHVRQLD QR NNAN
Sbjct: 121 LLWMVENMNGERVKSRSDFSGDQLVFPVSGNSRSNQVGHSNLRRGHHVRQLDLQRSNNAN 180

Query: 223 SHAHSFNLERLKSSLCKLLVFFVHLTAKFPL 253
           SHAHSFNLERLKSSLCKLLVFFVHLTAKFPL
Sbjct: 181 SHAHSFNLERLKSSLCKLLVFFVHLTAKFPL 211

[Close]

BLAST of Cp4.1LG02g12350 vs. ExPASy TrEMBL
Match: A0A0A0K8G4 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G042350 PE=4 SV=1)

HSP 1 Score: 403 bits (1036), Expect = 3.64e-139
Identity = 192/212 (90.57%), Postives = 199/212 (93.87%), Query Frame = 0


Query: 43  MWNFASNCVAGCTGLKSGSQKPTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPH 102
           MWNFASNCVAGC GLKS S+K +HTATECSDDE+SSDGREEVLECPICWESFNIVENVPH
Sbjct: 1   MWNFASNCVAGCAGLKSSSRKSSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60

Query: 103 VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 162
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120

Query: 163 LLWMVENMNGERVKSRSDFSGDQLVFPVSG-NSRSNQVGHSNLRRGHHVRQLDPQRPNNA 222
           LLWMVEN+N ERVKS S FSGDQLVFPVSG +SR NQV H+NLRRGHHVRQLD Q PNNA
Sbjct: 121 LLWMVENINVERVKSHSAFSGDQLVFPVSGTSSRGNQVSHNNLRRGHHVRQLDSQGPNNA 180

Query: 223 NSHAHSFNLERLKSSLCKLLVFFVHLTAKFPL 253
           NSH HSFNLERL+SSL KLLVFFVHLTAKFPL
Sbjct: 181 NSHFHSFNLERLQSSLRKLLVFFVHLTAKFPL 212

[Close]

BLAST of Cp4.1LG02g12350 vs. ExPASy TrEMBL
Match: A0A1S3BDF4 (uncharacterized protein LOC103488671 OS=Cucumis melo OX=3656 GN=LOC103488671 PE=4 SV=1)

HSP 1 Score: 397 bits (1019), Expect = 1.40e-136
Identity = 188/212 (88.68%), Postives = 198/212 (93.40%), Query Frame = 0


Query: 43  MWNFASNCVAGCTGLKSGSQKPTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPH 102
           MWNFASNCVAGC GLKS S+K +HTATECSDDE+SSDGREEVLECPICWESFNIVENVPH
Sbjct: 1   MWNFASNCVAGCAGLKSSSRKTSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60

Query: 103 VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 162
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120

Query: 163 LLWMVENMNGERVKSRSDFSGDQLVFPVSGNS-RSNQVGHSNLRRGHHVRQLDPQRPNNA 222
           LLWMVEN+N ERVKS S FSGD L+FPVSG+S R NQV H+NLRRGHHVRQLD Q PN+A
Sbjct: 121 LLWMVENINVERVKSHSAFSGDPLIFPVSGSSSRVNQVSHNNLRRGHHVRQLDSQGPNSA 180

Query: 223 NSHAHSFNLERLKSSLCKLLVFFVHLTAKFPL 253
           NSH H+FNLERL+SSL KLLVFFVHLTAKFPL
Sbjct: 181 NSHFHNFNLERLQSSLRKLLVFFVHLTAKFPL 212

[Close]

BLAST of Cp4.1LG02g12350 vs. ExPASy TrEMBL
Match: A0A5D3BZF8 (RING-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold121G00650 PE=4 SV=1)

HSP 1 Score: 397 bits (1019), Expect = 1.40e-136
Identity = 188/212 (88.68%), Postives = 198/212 (93.40%), Query Frame = 0


Query: 43  MWNFASNCVAGCTGLKSGSQKPTHTATECSDDEVSSDGREEVLECPICWESFNIVENVPH 102
           MWNFASNCVAGC GLKS S+K +HTATECSDDE+SSDGREEVLECPICWESFNIVENVPH
Sbjct: 1   MWNFASNCVAGCAGLKSSSRKTSHTATECSDDELSSDGREEVLECPICWESFNIVENVPH 60

Query: 103 VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 162
           VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF
Sbjct: 61  VLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNYF 120

Query: 163 LLWMVENMNGERVKSRSDFSGDQLVFPVSGNS-RSNQVGHSNLRRGHHVRQLDPQRPNNA 222
           LLWMVEN+N ERVKS S FSGD L+FPVSG+S R NQV H+NLRRGHHVRQLD Q PN+A
Sbjct: 121 LLWMVENINVERVKSHSAFSGDPLIFPVSGSSSRVNQVSHNNLRRGHHVRQLDSQGPNSA 180

Query: 223 NSHAHSFNLERLKSSLCKLLVFFVHLTAKFPL 253
           NSH H+FNLERL+SSL KLLVFFVHLTAKFPL
Sbjct: 181 NSHFHNFNLERLQSSLRKLLVFFVHLTAKFPL 212

[Close]

BLAST of Cp4.1LG02g12350 vs. TAIR 10
Match: AT3G29270.1 (RING/U-box superfamily protein )

HSP 1 Score: 246.1 bits (627), Expect = 3.7e-65
Identity = 126/219 (57.53%), Postives = 150/219 (68.49%), Query Frame = 0


Query: 36  VSLCVVRMWNFASNCVAGCTGLKSGSQKPTHTATECSDDEVSSDG-REEVLECPICWESF 95
           +S+   RMWN AS+ + G  G K+  ++P H   ECSDD+VSS G ++E LECPICWESF
Sbjct: 2   LSIPDTRMWNLASSYLTGNIGPKNDIRRPVHAHAECSDDDVSSVGSKDEGLECPICWESF 61

Query: 96  NIVENVPHVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNL 155
           NIVENVP+VLWCGHT+CKNCILGLQWA+VK PT PVQLPLFISCPWCNLLSFRLV++G L
Sbjct: 62  NIVENVPYVLWCGHTMCKNCILGLQWAIVKLPTHPVQLPLFISCPWCNLLSFRLVFRGTL 121

Query: 156 KFPCKNYFLLWMVENMNGERVKSRSDFSGDQLVFPVSGNSRSNQVGHSNLRRGHHVRQLD 215
           +FP KNYF+LWMVE MNGER  S      D        N  + +     L   HH  Q +
Sbjct: 122 RFPHKNYFVLWMVERMNGERRNSPGGAQTD------GNNDHTRETPSPCLHNRHHRSQPE 181

Query: 216 PQRPNNANSHAHSFNLERLKSSLCKLLVFFVHLTAKFPL 254
           P R  N     H    + +++SL K LVFFV LTAKFPL
Sbjct: 182 PSRSVN----DHRIPRDNIQTSLRKSLVFFVQLTAKFPL 210

[Close]

BLAST of Cp4.1LG02g12350 vs. TAIR 10
Match: AT3G29270.2 (RING/U-box superfamily protein )

HSP 1 Score: 246.1 bits (627), Expect = 3.7e-65
Identity = 126/219 (57.53%), Postives = 150/219 (68.49%), Query Frame = 0


Query: 36  VSLCVVRMWNFASNCVAGCTGLKSGSQKPTHTATECSDDEVSSDG-REEVLECPICWESF 95
           +S+   RMWN AS+ + G  G K+  ++P H   ECSDD+VSS G ++E LECPICWESF
Sbjct: 2   LSIPDTRMWNLASSYLTGNIGPKNDIRRPVHAHAECSDDDVSSVGSKDEGLECPICWESF 61

Query: 96  NIVENVPHVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNL 155
           NIVENVP+VLWCGHT+CKNCILGLQWA+VK PT PVQLPLFISCPWCNLLSFRLV++G L
Sbjct: 62  NIVENVPYVLWCGHTMCKNCILGLQWAIVKLPTHPVQLPLFISCPWCNLLSFRLVFRGTL 121

Query: 156 KFPCKNYFLLWMVENMNGERVKSRSDFSGDQLVFPVSGNSRSNQVGHSNLRRGHHVRQLD 215
           +FP KNYF+LWMVE MNGER  S      D        N  + +     L   HH  Q +
Sbjct: 122 RFPHKNYFVLWMVERMNGERRNSPGGAQTD------GNNDHTRETPSPCLHNRHHRSQPE 181

Query: 216 PQRPNNANSHAHSFNLERLKSSLCKLLVFFVHLTAKFPL 254
           P R  N     H    + +++SL K LVFFV LTAKFPL
Sbjct: 182 PSRSVN----DHRIPRDNIQTSLRKSLVFFVQLTAKFPL 210

[Close]

BLAST of Cp4.1LG02g12350 vs. TAIR 10
Match: AT1G69330.1 (RING/U-box superfamily protein )

HSP 1 Score: 204.1 bits (518), Expect = 1.6e-52
Identity = 109/219 (49.77%), Postives = 137/219 (62.56%), Query Frame = 0


Query: 43  MWNFASNCVAGCTGLKSGSQKPTHTATECSDDEVSSDGR-EEVLECPICWESFNIVENVP 102
           MW FASN V G  GLK   +     +++CSDDEVS+  R EE LECPICWESFNIVENVP
Sbjct: 1   MWGFASN-VIGSMGLKKSPKDSAQASSQCSDDEVSNISRDEEGLECPICWESFNIVENVP 60

Query: 103 HVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFPCKNY 162
           +VLWCGHTLC+NC+ GLQ AV++  +  +++P F+SCPWC LLSFR+VYKGNLKFP KN+
Sbjct: 61  YVLWCGHTLCQNCVFGLQSAVLRLSSQDIRIPFFVSCPWCQLLSFRIVYKGNLKFPRKNF 120

Query: 163 FLLWMVENMNGERVKSRSDFSGDQLVFPVSGNSRSNQVGHSNLRRGHHVRQ--------L 222
           FLLWMVE++NG+R       S   L   V+ N +S      ++  G+H           L
Sbjct: 121 FLLWMVESLNGDRTSHGDRTSHGSL---VTDNQQSAPTPRCSMSLGNHSSNNNLVARPLL 180

Query: 223 DPQRPNNANSHAHSFNLERLKSSLCKLLVFFVHLTAKFP 253
             Q  +    H HS    R   S  K L FF+  T+KFP
Sbjct: 181 RNQSTDLLPHHDHSNQPSRQLFSFHKSLDFFISFTSKFP 215

[Close]

BLAST of Cp4.1LG02g12350 vs. TAIR 10
Match: AT1G74370.1 (RING/U-box superfamily protein )

HSP 1 Score: 169.5 bits (428), Expect = 4.4e-42
Identity = 101/216 (46.76%), Postives = 128/216 (59.26%), Query Frame = 0


Query: 43  MWNFASNCVAGCTGLKSGSQKPTHTATECSDDEVSSDGR----EEVLECPICWESFNIVE 102
           MWN AS  +    G  S  ++        + D  S DGR    EE LECPICWESFN+VE
Sbjct: 1   MWNLASKSIR--EGFISKGEEAATKPRRATLDR-SGDGRKTTKEEKLECPICWESFNVVE 60

Query: 103 NVPHVLWCGHTLCKNCILGLQWA-VVKFPTLPVQLPLFISCPWCNLLSFRLVYKGNLKFP 162
           NVP+VLWCGHT+CK C+LGLQ A V+K   LP QLP F++CPWCN+LS RLV  G ++FP
Sbjct: 61  NVPYVLWCGHTICKYCLLGLQRAIVIKSSALPFQLPFFVACPWCNILSLRLVCNGTIRFP 120

Query: 163 CKNYFLLWMVENMNGERVKSRSDFSGDQLVFPVSGNSRSNQVGHSNLRRGHHVRQLDPQR 222
            KN++LLWMVE+MNG R ++ SD   ++ V     + R+   G SN   G     LD + 
Sbjct: 121 SKNFYLLWMVESMNGSRSEAPSD---NKRVASGQRDLRNRCDGVSNTALGDE-GLLDNRS 180

Query: 223 PNNANSHAHSFNLERLKSSLCKLLVFFVHLTAKFPL 254
             N  +    F   RL  S+ K +    HL AKFPL
Sbjct: 181 WWNGVTRGF-FRTGRLHDSVRKSMALVAHLLAKFPL 208

[Close]

BLAST of Cp4.1LG02g12350 vs. TAIR 10
Match: AT1G21651.1 (zinc ion binding )

HSP 1 Score: 50.1 bits (118), Expect = 3.9e-06
Identity = 23/59 (38.98%), Postives = 31/59 (52.54%), Query Frame = 0


Query: 86  ECPICWESFNIVENVPHVLWCGHTLCKNCILGLQWAVVKFPTLPVQLPLFISCPWCNLL 145
           ECP+C +S++    VP VL CGHT C+ C+            LP + P  I CP C +L
Sbjct: 5   ECPVCLQSYDGESTVPRVLACGHTACEECL----------TNLPKKFPDTIRCPACTVL 53

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g12350 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q13049	3.2e-05	35.82	E3 ubiquitin-protein ligase TRIM32 OS=Homo sapiens OX=9606 GN=TRIM32 PE=1 SV=2	[more]
Q8CH72	3.2e-05	32.05	E3 ubiquitin-protein ligase TRIM32 OS=Mus musculus OX=10090 GN=Trim32 PE=1 SV=2	[more]
Q9H0X6	5.5e-05	37.14	RING finger protein 208 OS=Homo sapiens OX=9606 GN=RNF208 PE=1 SV=2	[more]
Q8K0W3	1.6e-04	32.91	RING finger protein 208 OS=Mus musculus OX=10090 GN=Rnf208 PE=1 SV=2	[more]

BLAST of Cp4.1LG02g12350 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6607114.1	3.26e-159	80.28	hypothetical protein SDJN03_00456, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023523716.1	1.38e-157	100.00	uncharacterized protein LOC111787870 [Cucurbita pepo subsp. pepo] >XP_023523718....	[more]
KAG7036804.1	4.61e-156	99.05	hypothetical protein SDJN02_00424, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022949151.1	3.77e-155	99.05	uncharacterized protein LOC111452589 [Cucurbita moschata] >XP_022949153.1 unchar...	[more]
XP_022998137.1	7.61e-155	99.05	uncharacterized protein LOC111492874 [Cucurbita maxima] >XP_022998138.1 uncharac...	[more]

BLAST of Cp4.1LG02g12350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GC00	1.83e-155	99.05	uncharacterized protein LOC111452589 OS=Cucurbita moschata OX=3662 GN=LOC1114525...	[more]
A0A6J1K9F8	3.68e-155	99.05	uncharacterized protein LOC111492874 OS=Cucurbita maxima OX=3661 GN=LOC111492874...	[more]
A0A0A0K8G4	3.64e-139	90.57	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G042350 P...	[more]
A0A1S3BDF4	1.40e-136	88.68	uncharacterized protein LOC103488671 OS=Cucumis melo OX=3656 GN=LOC103488671 PE=...	[more]
A0A5D3BZF8	1.40e-136	88.68	RING-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]

BLAST of Cp4.1LG02g12350 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G29270.1	3.7e-65	57.53	RING/U-box superfamily protein	[more]
AT3G29270.2	3.7e-65	57.53	RING/U-box superfamily protein	[more]
AT1G69330.1	1.6e-52	49.77	RING/U-box superfamily protein	[more]
AT1G74370.1	4.4e-42	46.76	RING/U-box superfamily protein	[more]
AT1G21651.1	3.9e-06	38.98	zinc ion binding	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027370	RING-type zinc-finger, LisH dimerisation motif	PFAM	PF13445	zf-RING_UBOX	coord: 87..126 e-value: 9.7E-8 score: 31.9
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 74..178 e-value: 1.9E-11 score: 45.2
None	No IPR available	PANTHER	PTHR46616:SF9	OS03G0211100 PROTEIN	coord: 43..253
None	No IPR available	PANTHER	PTHR46616	UBIQUITIN-PROTEIN LIGASE	coord: 43..253
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 82..144
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 106..115
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 87..142 score: 10.158304

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG02g12350.1	Cp4.1LG02g12350.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity