Cp4.1LG02g12280 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG02g12280
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	RING/FYVE/PHD zinc finger superfamily protein
Location	Cp4.1LG02: 11925058 .. 11929874 (-)
RNA-Seq Expression	Cp4.1LG02g12280
Synteny	Cp4.1LG02g12280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGGATTGGATTGGACGCAAAGACGTGGAGGTTTCGAGCGAAGAAAACTCCGCCTATATATATAGAACCAGGTCCACCCTCCTCCAGATTCCTTCTTATTTTAGTCTTTGGCGGAATCAATCTTCTATTTTTGATTTTCTACGCTCTCCAAAAACTTCTACATTCCGCACCTANACGTTTCTTCTTAATTTGATTTTTCTTTATTTTTATCTTTTTTTCTTCAATGTTATCATCGCAATCTACTATATTCTTGTTTGATCTCTTCAATTTGTGTTTTTCTTCATGTAATTAATCGAATCGCCTTTGTAGGGTTTCTTTTTGTGCTTCAAATTCGCCGTGTGAGTTGGATTTTTGGGGGTTTAGAGGTTTCTGCGGTTTTGAGGACAATGGGCGACCATCTCGTCCTGTATGTTGATCATTTGATTCGACCGGTTGCTCCTGTTCAATCTGTGGCCGAGCCGGTTGACCCTGTTCCTTCTGCACCGCGTGAAGGTGTAGTTGACTCGGCTGCGGCTGGTCCTTCGTGTTCGACTGCAACTGTGGATCATCCGACGGTGGAGCAGGATGCACCTAATGAGGAGGAGCCTCTGATTCAGGTAGCAGAGTGCCGCATTTGTCAGGAAGAAGACGGTATCAATAATTTAGAAACTCCCTGCGCATGTAGTGGTAGTCTTAAGGTAATTGACGCCTTGACCCCCTTTTCCTTTATTAATGTGCTCAAGACTTTTTATTTGCGTTGTACATGTGTTTGCTGTTGCTGCTGAATTGGATGAGAGATCCATCTGGATTTTTTAGTGTCTTGTCGAGAATTCATTAGTTTTATTCACAGCTTGGTTAATTTTATATTTTTCTATAATTTTTTTTCCTCAATGCTTTGTTTTTTACTTTTTAAAATTCATCTCCTATCCAATAGCTTGGTGATAAGAGAACACTTCTTTTGCCTCAACTTTTTTGTTTGTGTCAATTTGTACGTTCGACGGGAAACTTTATGGACTGGTATGTGGTGCATCTGAGTTATAATGTGGCTTGATAAAACTTGACAAGAAGCATGACCATCATGCATGGTGTCAGTGATCTTGAACTCTAATGTTTTTTTTCTTCAGAATGTAACTAAAGTAGGTTAGGCTATTTGAATTTACCAATATGAACCCATATGGTAAAACTTTTCTAAGTTATTTGTTTATTAACCTTTTGCACGTTTCTGATTAATGGTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTCAGTATGCTCATAGAAAGTGCGTTCAACATTGGTGCAATGAGAAAGGAGACATAATTTGTGAGATTTGTCATCAGGTATGCGTGATGATTTTGATTTGATATGTCGACCATTTTTGTATTCTTGTAAAGTTTTTGCGGTTGGAGAATTTCAAATAAATTGCTAATATTATCTATATGCTTTAGCTTGCGTGCAAGTTTTCTGCCAAGAATATTTTTTTTGTAACTCTTAATTCTTTGAATTCTTACATCGGGAGTAAAAAAAATTCACTTTTAGTGTTTTAAAAAGTGCATAAAAGTGTGCACGCTGAAGAGGGGGCACCTCGCCTACCTCTATAGGGCACACACCTGATAGTTTTATTTTTTATTTTCAAATTTTTAATTGAGAGGCATTTTTATTGTATATATAAGAAAGGTATCTTCCGCCTAGGGGACTTGTAGACTTAAAGGCAAAATCCTTGGATTGAGAGTTTGTTTCGGTTATTGTGATAGGTGAGAGTGTTGTAGGAGAAAACCATAGAAGTAAAGAGAGAATTTTGTACTCTACAAACCACATATATGAAGGAGGTTTACCTTTTTTTTCTTTTTTTCCTTCTCTTTCTTTTGGTCTTTCACTCTCGACCAGTCACTTTGCCTTCTCTCTTTGAGCCCTACCTTTTTCCCTCCTTTCTCTTGATACGTCCATCTCTGAGTAAACCATAACGGTGGTTCACTATAGCGCACACAATGATTTGGGTTTTTTTGCAATGGGTTGGATTTGGTATCATAGAAGATTGTTCCATCTATATGAGAGGAAGACGACCAGCATGTCAATAGGTGGATTCCTCCTTCCTCATGCTCAACCTAAAGTAATGTGGATACCATTTGGGATACTCTGTGTGTCGAAAGGGAGTTGGGGCATTATTGTCAGAGATGGTAGAGGTAGAGGTTCTTTAATGTTGAGTGTGTTGATGGACAAGGCATTGGTGTTTATTCGTGACTTCGGGATTAAGAGATATTTCTGTTAAAACTTTGTTGTTGGTGAAAAGTTGGTTTGATGGCTGACCTTTTCTATTTTGATCATGGGGCTTCTGATTCAGGTCATTAGGCTCCTCTTCTCCCTCGCTTATAATTCTTTCTCCTTTAACCTCATTGCTGTAACCTTGATCCTGTAGACCATTCCATTGCTAAGTCTGGACCTTTACAGGAGTGGAACGTTTGTTGTTCTTAGTTGGTTGTATGCTCTCTTTATTTGTCACGGTGCATTGGCCAAGATTATGAATGCTTCTTTTTTGCCAAAAAAAAAAAAAAAAGGAATGAAAAAGAACATTTATCTGTTTTATTCACTTTTTCTGAATAAAAATTATAAAATGTCATCCTCATTTTGTCTGCACTTGTTTCATGTTATGTTGAATGGTATAATGAGATTTGCAGTTGCAGCTTCTTTTCTGTTGATATTTTCGTGTTTAATTCCTCATTGATGCTGATGTGTTTTATTCAATTGCCAGTTTTATCAACCTGGATACACTGCACCATCTCGTTCTGAAGAAACTGCTATTGATATGGAGTAAGCTCAACCTTTTTGTTATTTCCTATTGTCTTGCATCGATTAGCATGTTTCTGAACACCCGCAAATATTTTGTTTTCATGTAATGCTGTTGTATTTTAAATATTGATCTGGATGTGGGTCTGCACAGGGGAAGATGGACTATTGCTGGTAATCCATTAGACCTGAGAGATACTCGGCTATTAGCCATTGCAGAGGCGGAACGGCATTTTCTGGAGGCCGAATATGATGATTATGCTGCCTCTAATGACAGTGGAGCTGCATTTTGCCGATCGGCTGCTCTTATTGTATGTTTGCTATTAGTAGTTCGTAGAACTCTTCTTTTCACAAAAAATTGGAATGATATCAAACTTTCCACTCCAGTGTTTTCCGTGCTACTGCACTGATGATTTATTTTATTTTATGCGGCAGTTACTAGCTCTTCTCCTTCTGCGTCATGCATTGACCATAACAGATCCAGACGGTGAAGATGATGCATCTGCCTTCTTCTCTGTAAGTGGAGTATGAATTTATTTTCTTAAATTGAAAAGGAAAAATAGAGTTCATGATGGGATGGGTTTACAATCTTAATACATGCCTGTGACAGATTTTCTTGCTTCGTGCTGCTGGTTTTCTGTTACCCTGCTACATCATGGCCTGGGCCATCAGTATCTTGCAACGTCGAAGACAAAGACAGGTTGGTTGGTAATTTAGGAGTTCTTTAAATTTTTTCTTCTTATACTCTTCTGTAGACTAAATTTTGAAAATTAAGAATGGTTTGGTAACCGGAAAGAGAGAGATTCTATGAGATCCCACATCGATGGGAGATAGGAACGAGTGCCAATGAGGATGTTGGGTCCTAAAAAGAGATCTCACATTGGTTGGGGAGGGAAACGAAACATTCTTTACAAGGGTGTGGAAATAGCAGACGCGTTTAAAAACTTTGAGAGGAAGCCCTGCGGTCCCACATTGGTTGGGGAGGAGAACAATCACCATTTATAAGGGGGTGGAAACCTTCCCCTAGTAGAGCGTTTTAAAGCCTTGAGAGGAAGCCCGAAAGGGAAAGCCCAAAGAAAACAATATCTGCTAGCGGTGGATCTGGGTCGTTACAAGCTCGATAAGGAAAGCTCAAAGAGGACAACATCTTCTAGCATTGGGCTTGGGGTGTTTGTAGGTTCTAGAGATCTTTGTGTCTAAAAGAACAGTCCATTAGAAGGAAAAAAAACTGTTTCTGAAGTCAACCTTTTAAATAAGTAGTTTAAAACAGAAAAATCTTAAATTATGTTATAGTTGTATTGTCAAGTCTTAGGTTAGTTAGCTGTATGAAGCCTGAAACATAATGAGAGAGAGAGTTGGAACATAATGAACTTAATAGAATGTTGCTGCTAAGTTGAGACATTATTTCCAATTGAATATAGTATTGTATGGTTGTGAACCAGCAGGAGGCGGCAGCAGTGGCTGCAACACAAGTGGCGTTTGTGCTACAACATGGACAGCATAGAAGCTTACAATTTGCGATTGCATCAGCAGCAGGGGCACCCCTCACCCCTCACCCTCACCCCCTTCCTCATCCTCATCCTCATACTCCTGCTTGAACTGCAACTGCAGCAGTCAACCATGTAATAAATACTATATTTTCAAACATGAAAAACCTTTCTTCATCTACTTGCTCTTGTTGTCGTCGTCGTCATCATTTGTATGTGCCAACATTTTCCCCCAGCTTCGTCATCTTCCAAAACCAGGTACAGTCACTAACAAACTTCTATTATTTTCGTCGTCTGTTTCGGGACCAGTCAATTCTATGTTCCAATTTGATCACACTGCTTGATGCTCTGCTTCTTGGAAGCTAAACATAAAACTCTTGCCTTGTATTTTGTAAATTCTTTTTTATATAGAGAAGAAATTATCTACAGGGAGATTTTATATTGTATACAATTTGCTGGGCATGTCAAATCAAAATGGTAGATAGCATGAGAAAGATCATAAACTCACCTGTTATAAACCAAAGTGGCAGATCTTTATTTGAGAGTTGAAGCCAGAATGTTTGTTTAT

mRNA sequence

ATTGGATTGGATTGGACGCAAAGACGTGGAGGTTTCGAGCGAAGAAAACTCCGCCTATATATATAGAACCAGGGTTTCTTTTTGTGCTTCAAATTCGCCGTGTGAGTTGGATTTTTGGGGGTTTAGAGGTTTCTGCGGTTTTGAGGACAATGGGCGACCATCTCGTCCTGTATGTTGATCATTTGATTCGACCGGTTGCTCCTGTTCAATCTGTGGCCGAGCCGGTTGACCCTGTTCCTTCTGCACCGCGTGAAGGTGTAGTTGACTCGGCTGCGGCTGGTCCTTCGTGTTCGACTGCAACTGTGGATCATCCGACGGTGGAGCAGGATGCACCTAATGAGGAGGAGCCTCTGATTCAGGTAGCAGAGTGCCGCATTTGTCAGGAAGAAGACGGTATCAATAATTTAGAAACTCCCTGCGCATGTAGTGGTAGTCTTAAGTATGCTCATAGAAAGTGCGTTCAACATTGGTGCAATGAGAAAGGAGACATAATTTGTGAGATTTGTCATCAGTTTTATCAACCTGGATACACTGCACCATCTCGTTCTGAAGAAACTGCTATTGATATGGAGGGAAGATGGACTATTGCTGGTAATCCATTAGACCTGAGAGATACTCGGCTATTAGCCATTGCAGAGGCGGAACGGCATTTTCTGGAGGCCGAATATGATGATTATGCTGCCTCTAATGACAGTGGAGCTGCATTTTGCCGATCGGCTGCTCTTATTTTACTAGCTCTTCTCCTTCTGCGTCATGCATTGACCATAACAGATCCAGACGGTGAAGATGATGCATCTGCCTTCTTCTCTATTTTCTTGCTTCGTGCTGCTGGTTTTCTGTTACCCTGCTACATCATGGCCTGGGCCATCAGTATCTTGCAACGTCGAAGACAAAGACAGGAGGCGGCAGCAGTGGCTGCAACACAAGTGGCGTTTGTGCTACAACATGGACAGCATAGAAGCTTACAATTTGCGATTGCATCAGCAGCAGGGGCACCCCTCACCCCTCACCCTCACCCCCTTCCTCATCCTCATCCTCATACTCCTGCTTGAACTGCAACTGCAGCAGTCAACCATGTAATAAATACTATATTTTCAAACATGAAAAACCTTTCTTCATCTACTTGCTCTTGTTGTCGTCGTCGTCATCATTTGTATGTGCCAACATTTTCCCCCAGCTTCGTCATCTTCCAAAACCAGGTACAGTCACTAACAAACTTCTATTATTTTCGTCGTCTGTTTCGGGACCAGTCAATTCTATGTTCCAATTTGATCACACTGCTTGATGCTCTGCTTCTTGGAAGCTAAACATAAAACTCTTGCCTTGTATTTTGTAAATTCTTTTTTATATAGAGAAGAAATTATCTACAGGGAGATTTTATATTGTATACAATTTGCTGGGCATGTCAAATCAAAATGGTAGATAGCATGAGAAAGATCATAAACTCACCTGTTATAAACCAAAGTGGCAGATCTTTATTTGAGAGTTGAAGCCAGAATGTTTGTTTAT

Coding sequence (CDS)

ATGGGCGACCATCTCGTCCTGTATGTTGATCATTTGATTCGACCGGTTGCTCCTGTTCAATCTGTGGCCGAGCCGGTTGACCCTGTTCCTTCTGCACCGCGTGAAGGTGTAGTTGACTCGGCTGCGGCTGGTCCTTCGTGTTCGACTGCAACTGTGGATCATCCGACGGTGGAGCAGGATGCACCTAATGAGGAGGAGCCTCTGATTCAGGTAGCAGAGTGCCGCATTTGTCAGGAAGAAGACGGTATCAATAATTTAGAAACTCCCTGCGCATGTAGTGGTAGTCTTAAGTATGCTCATAGAAAGTGCGTTCAACATTGGTGCAATGAGAAAGGAGACATAATTTGTGAGATTTGTCATCAGTTTTATCAACCTGGATACACTGCACCATCTCGTTCTGAAGAAACTGCTATTGATATGGAGGGAAGATGGACTATTGCTGGTAATCCATTAGACCTGAGAGATACTCGGCTATTAGCCATTGCAGAGGCGGAACGGCATTTTCTGGAGGCCGAATATGATGATTATGCTGCCTCTAATGACAGTGGAGCTGCATTTTGCCGATCGGCTGCTCTTATTTTACTAGCTCTTCTCCTTCTGCGTCATGCATTGACCATAACAGATCCAGACGGTGAAGATGATGCATCTGCCTTCTTCTCTATTTTCTTGCTTCGTGCTGCTGGTTTTCTGTTACCCTGCTACATCATGGCCTGGGCCATCAGTATCTTGCAACGTCGAAGACAAAGACAGGAGGCGGCAGCAGTGGCTGCAACACAAGTGGCGTTTGTGCTACAACATGGACAGCATAGAAGCTTACAATTTGCGATTGCATCAGCAGCAGGGGCACCCCTCACCCCTCACCCTCACCCCCTTCCTCATCCTCATCCTCATACTCCTGCTTGA

Protein sequence

MGDHLVLYVDHLIRPVAPVQSVAEPVDPVPSAPREGVVDSAAAGPSCSTATVDHPTVEQDAPNEEEPLIQVAECRICQEEDGINNLETPCACSGSLKYAHRKCVQHWCNEKGDIICEICHQFYQPGYTAPSRSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEAEYDDYAASNDSGAAFCRSAALILLALLLLRHALTITDPDGEDDASAFFSIFLLRAAGFLLPCYIMAWAISILQRRRQRQEAAAVAATQVAFVLQHGQHRSLQFAIASAAGAPLTPHPHPLPHPHPHTPA

Homology

[Close]

BLAST of Cp4.1LG02g12280 vs. ExPASy Swiss-Prot
Match: F4JKK0 (Probable E3 ubiquitin ligase SUD1 OS=Arabidopsis thaliana OX=3702 GN=SUD1 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.1e-07
Identity = 38/93 (40.86%), Postives = 48/93 (51.61%), Query Frame = 0


Query: 45  PSCSTATVDHPTVEQDAPNEEEPLIQVAECRICQEE-DGINNLETPCACSGSLKYAHRKC 104
           P+ STAT     V+ D   E+        CRIC+   D  N L  PCACSGS+K+ H+ C
Sbjct: 47  PAVSTATGSR-YVDDDEDEED-------VCRICRNPGDADNPLRYPCACSGSIKFVHQDC 106

Query: 105 VQHWCNEKGDIICEIC-HQF-YQPGY--TAPSR 133
           +  W N      CE+C H F + P Y   APSR
Sbjct: 107 LLQWLNHSNARQCEVCKHPFSFSPVYADNAPSR 131

[Close]

BLAST of Cp4.1LG02g12280 vs. ExPASy Swiss-Prot
Match: Q0IH10 (E3 ubiquitin-protein ligase MARCHF3 OS=Xenopus laevis OX=8355 GN=marchf3 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 7.3e-07
Identity = 20/47 (42.55%), Postives = 28/47 (59.57%), Query Frame = 0


Query: 74  CRICQEEDGINNLETPCACSGSLKYAHRKCVQHWCNEKGDIICEICH 121
           CRIC E     +L +PC C+G+L   HR C++HW +      CE+CH
Sbjct: 70  CRICHEGSTQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYCELCH 116

[Close]

BLAST of Cp4.1LG02g12280 vs. ExPASy Swiss-Prot
Match: Q68FA7 (E3 ubiquitin-protein ligase MARCHF3 OS=Xenopus tropicalis OX=8364 GN=marchf3 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 7.3e-07
Identity = 20/47 (42.55%), Postives = 28/47 (59.57%), Query Frame = 0


Query: 74  CRICQEEDGINNLETPCACSGSLKYAHRKCVQHWCNEKGDIICEICH 121
           CRIC E     +L +PC C+G+L   HR C++HW +      CE+CH
Sbjct: 69  CRICHEGSTQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYCELCH 115

[Close]

BLAST of Cp4.1LG02g12280 vs. ExPASy Swiss-Prot
Match: Q99M02 (E3 ubiquitin-protein ligase MARCHF2 OS=Mus musculus OX=10090 GN=MARCHF2 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 3.6e-06
Identity = 19/47 (40.43%), Postives = 27/47 (57.45%), Query Frame = 0


Query: 74  CRICQEEDGINNLETPCACSGSLKYAHRKCVQHWCNEKGDIICEICH 121
           CRIC E     NL +PC C+G+L   H+ C++ W +      CE+CH
Sbjct: 64  CRICHEGANGENLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCH 110

[Close]

BLAST of Cp4.1LG02g12280 vs. ExPASy Swiss-Prot
Match: Q5I0I2 (E3 ubiquitin-protein ligase MARCHF2 OS=Rattus norvegicus OX=10116 GN=Marchf2 PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 3.6e-06
Identity = 19/47 (40.43%), Postives = 27/47 (57.45%), Query Frame = 0


Query: 74  CRICQEEDGINNLETPCACSGSLKYAHRKCVQHWCNEKGDIICEICH 121
           CRIC E     NL +PC C+G+L   H+ C++ W +      CE+CH
Sbjct: 64  CRICHEGANGENLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCH 110

[Close]

BLAST of Cp4.1LG02g12280 vs. NCBI nr
Match: XP_023523368.1 (uncharacterized protein LOC111787585 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 603 bits (1554), Expect = 1.85e-217
Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 0


Query: 1   MGDHLVLYVDHLIRPVAPVQSVAEPVDPVPSAPREGVVDSAAAGPSCSTATVDHPTVEQD 60
           MGDHLVLYVDHLIRPVAPVQSVAEPVDPVPSAPREGVVDSAAAGPSCSTATVDHPTVEQD
Sbjct: 1   MGDHLVLYVDHLIRPVAPVQSVAEPVDPVPSAPREGVVDSAAAGPSCSTATVDHPTVEQD 60

Query: 61  APNEEEPLIQVAECRICQEEDGINNLETPCACSGSLKYAHRKCVQHWCNEKGDIICEICH 120
           APNEEEPLIQVAECRICQEEDGINNLETPCACSGSLKYAHRKCVQHWCNEKGDIICEICH
Sbjct: 61  APNEEEPLIQVAECRICQEEDGINNLETPCACSGSLKYAHRKCVQHWCNEKGDIICEICH 120

Query: 121 QFYQPGYTAPSRSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEAEYDDYAASN 180
           QFYQPGYTAPSRSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEAEYDDYAASN
Sbjct: 121 QFYQPGYTAPSRSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEAEYDDYAASN 180

Query: 181 DSGAAFCRSAALILLALLLLRHALTITDPDGEDDASAFFSIFLLRAAGFLLPCYIMAWAI 240
           DSGAAFCRSAALILLALLLLRHALTITDPDGEDDASAFFSIFLLRAAGFLLPCYIMAWAI
Sbjct: 181 DSGAAFCRSAALILLALLLLRHALTITDPDGEDDASAFFSIFLLRAAGFLLPCYIMAWAI 240

Query: 241 SILQRRRQRQEAAAVAATQVAFVLQHGQHRSLQFAIASAAGAPLTPHPHPLPHPHPHTPA 300
           SILQRRRQRQEAAAVAATQVAFVLQHGQHRSLQFAIASAAGAPLTPHPHPLPHPHPHTPA
Sbjct: 241 SILQRRRQRQEAAAVAATQVAFVLQHGQHRSLQFAIASAAGAPLTPHPHPLPHPHPHTPA 300

[Close]

BLAST of Cp4.1LG02g12280 vs. NCBI nr
Match: XP_022997773.1 (uncharacterized protein LOC111492629 isoform X2 [Cucurbita maxima])

HSP 1 Score: 598 bits (1542), Expect = 1.25e-215
Identity = 297/299 (99.33%), Postives = 297/299 (99.33%), Query Frame = 0


Query: 1   MGDHLVLYVDHLIRPVAPVQSVAEPVDPVPSAPREGVVDSAAAGPSCSTATVDHPTVEQD 60
           MGDHLVLYVDHLIRPVAPVQSVAEPVDPVPSAPREGVVDSAAAGPSCSTAT DHPTVEQD
Sbjct: 1   MGDHLVLYVDHLIRPVAPVQSVAEPVDPVPSAPREGVVDSAAAGPSCSTATADHPTVEQD 60

Query: 61  APNEEEPLIQVAECRICQEEDGINNLETPCACSGSLKYAHRKCVQHWCNEKGDIICEICH 120
           APNEEEPLIQVAECRICQEEDGINNLETPCACSGSLKYAHRKCVQHWCNEKGDIICEICH
Sbjct: 61  APNEEEPLIQVAECRICQEEDGINNLETPCACSGSLKYAHRKCVQHWCNEKGDIICEICH 120

Query: 121 QFYQPGYTAPSRSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEAEYDDYAASN 180
           QFYQPGYTAPSRSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEAEYDDYAASN
Sbjct: 121 QFYQPGYTAPSRSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEAEYDDYAASN 180

Query: 181 DSGAAFCRSAALILLALLLLRHALTITDPDGEDDASAFFSIFLLRAAGFLLPCYIMAWAI 240
           DSGAAFCRSAALILLALLLLRHALTITDPDGEDDASAFFSIFLLRAAGFLLPCYIMAWAI
Sbjct: 181 DSGAAFCRSAALILLALLLLRHALTITDPDGEDDASAFFSIFLLRAAGFLLPCYIMAWAI 240

Query: 241 SILQRRRQRQEAAAVAATQVAFVLQHGQHRSLQFAIASAAGAPLTPHPHPLPHPHPHTP 299
           SILQRRRQRQEAAAVAATQVAFVLQHGQHR LQFAIASAAGAPLTPHPHPLPHPHPHTP
Sbjct: 241 SILQRRRQRQEAAAVAATQVAFVLQHGQHRGLQFAIASAAGAPLTPHPHPLPHPHPHTP 299

[Close]

BLAST of Cp4.1LG02g12280 vs. NCBI nr
Match: XP_023523367.1 (uncharacterized protein LOC111787585 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 598 bits (1542), Expect = 1.30e-215
Identity = 300/301 (99.67%), Postives = 300/301 (99.67%), Query Frame = 0


Query: 1   MGDHLVLYVDHLIRPVAPVQSVAEPVDPVPSAPREGVVDSAAAGPSCSTATVDHPTVEQD 60
           MGDHLVLYVDHLIRPVAPVQSVAEPVDPVPSAPREGVVDSAAAGPSCSTATVDHPTVEQD
Sbjct: 1   MGDHLVLYVDHLIRPVAPVQSVAEPVDPVPSAPREGVVDSAAAGPSCSTATVDHPTVEQD 60

Query: 61  APNEEEPLIQVAECRICQEEDGINNLETPCACSGSLKYAHRKCVQHWCNEKGDIICEICH 120
           APNEEEPLIQVAECRICQEEDGINNLETPCACSGSLKYAHRKCVQHWCNEKGDIICEICH
Sbjct: 61  APNEEEPLIQVAECRICQEEDGINNLETPCACSGSLKYAHRKCVQHWCNEKGDIICEICH 120

Query: 121 QFYQPGYTAPSRSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEAEYDDYAASN 180
           QFYQPGYTAPSRSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEAEYDDYAASN
Sbjct: 121 QFYQPGYTAPSRSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEAEYDDYAASN 180

Query: 181 DSGAAFCRSAALILLALLLLRHALTITDPDGEDDASAFFSIFLLRAAGFLLPCYIMAWAI 240
           DSGAAFCRSAALILLALLLLRHALTITDPDGEDDASAFFSIFLLRAAGFLLPCYIMAWAI
Sbjct: 181 DSGAAFCRSAALILLALLLLRHALTITDPDGEDDASAFFSIFLLRAAGFLLPCYIMAWAI 240

Query: 241 SILQRRRQRQ-EAAAVAATQVAFVLQHGQHRSLQFAIASAAGAPLTPHPHPLPHPHPHTP 300
           SILQRRRQRQ EAAAVAATQVAFVLQHGQHRSLQFAIASAAGAPLTPHPHPLPHPHPHTP
Sbjct: 241 SILQRRRQRQQEAAAVAATQVAFVLQHGQHRSLQFAIASAAGAPLTPHPHPLPHPHPHTP 300

[Close]

BLAST of Cp4.1LG02g12280 vs. NCBI nr
Match: XP_022948671.1 (uncharacterized protein LOC111452273 isoform X2 [Cucurbita moschata])

HSP 1 Score: 596 bits (1536), Expect = 1.11e-214
Identity = 295/297 (99.33%), Postives = 296/297 (99.66%), Query Frame = 0


Query: 1   MGDHLVLYVDHLIRPVAPVQSVAEPVDPVPSAPREGVVDSAAAGPSCSTATVDHPTVEQD 60
           MGDHLVLYVDHLIRPVAPVQSVAEPVDP+PSAPREGVVDSAAAGPSCSTATVDHPTVEQD
Sbjct: 1   MGDHLVLYVDHLIRPVAPVQSVAEPVDPIPSAPREGVVDSAAAGPSCSTATVDHPTVEQD 60

Query: 61  APNEEEPLIQVAECRICQEEDGINNLETPCACSGSLKYAHRKCVQHWCNEKGDIICEICH 120
           APNEEEPLIQVAECRICQEEDGINNLETPCACSGSLKYAHRKCVQHWCNEKGDIICEICH
Sbjct: 61  APNEEEPLIQVAECRICQEEDGINNLETPCACSGSLKYAHRKCVQHWCNEKGDIICEICH 120

Query: 121 QFYQPGYTAPSRSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEAEYDDYAASN 180
           QFYQPGYTAPSRSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEAEYDDYAASN
Sbjct: 121 QFYQPGYTAPSRSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEAEYDDYAASN 180

Query: 181 DSGAAFCRSAALILLALLLLRHALTITDPDGEDDASAFFSIFLLRAAGFLLPCYIMAWAI 240
           DSGAAFCRSAALILLALLLLRHALTITDPDGEDDASAFFSIFLLRAAGFLLPCYIMAWAI
Sbjct: 181 DSGAAFCRSAALILLALLLLRHALTITDPDGEDDASAFFSIFLLRAAGFLLPCYIMAWAI 240

Query: 241 SILQRRRQRQEAAAVAATQVAFVLQHGQHRSLQFAIASAAGAPLTPHPHPLPHPHPH 297
           SILQRRRQRQEAAAVAATQVAFVLQHGQHR LQFAIASAAGAPLTPHPHPLPHPHPH
Sbjct: 241 SILQRRRQRQEAAAVAATQVAFVLQHGQHRGLQFAIASAAGAPLTPHPHPLPHPHPH 297

[Close]

BLAST of Cp4.1LG02g12280 vs. NCBI nr
Match: KAG7036813.1 (putative E3 ubiquitin ligase SUD1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 595 bits (1533), Expect = 3.18e-214
Identity = 295/297 (99.33%), Postives = 295/297 (99.33%), Query Frame = 0


Query: 1   MGDHLVLYVDHLIRPVAPVQSVAEPVDPVPSAPREGVVDSAAAGPSCSTATVDHPTVEQD 60
           MGDHLVLYVDHLIRPVAPVQSVAEPVDPVPSAPREGVVDSAAAGPSCSTAT DHPTVEQD
Sbjct: 1   MGDHLVLYVDHLIRPVAPVQSVAEPVDPVPSAPREGVVDSAAAGPSCSTATADHPTVEQD 60

Query: 61  APNEEEPLIQVAECRICQEEDGINNLETPCACSGSLKYAHRKCVQHWCNEKGDIICEICH 120
           APNEEEPLIQVAECRICQEEDGINNLETPCACSGSLKYAHRKCVQHWCNEKGDIICEICH
Sbjct: 61  APNEEEPLIQVAECRICQEEDGINNLETPCACSGSLKYAHRKCVQHWCNEKGDIICEICH 120

Query: 121 QFYQPGYTAPSRSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEAEYDDYAASN 180
           QFYQPGYTAPSRSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEAEYDDYAASN
Sbjct: 121 QFYQPGYTAPSRSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEAEYDDYAASN 180

Query: 181 DSGAAFCRSAALILLALLLLRHALTITDPDGEDDASAFFSIFLLRAAGFLLPCYIMAWAI 240
           DSGAAFCRSAALILLALLLLRHALTITDPDGEDDASAFFSIFLLRAAGFLLPCYIMAWAI
Sbjct: 181 DSGAAFCRSAALILLALLLLRHALTITDPDGEDDASAFFSIFLLRAAGFLLPCYIMAWAI 240

Query: 241 SILQRRRQRQEAAAVAATQVAFVLQHGQHRSLQFAIASAAGAPLTPHPHPLPHPHPH 297
           SILQRRRQRQEAAAVAATQVAFVLQHGQHR LQFAIASAAGAPLTPHPHPLPHPHPH
Sbjct: 241 SILQRRRQRQEAAAVAATQVAFVLQHGQHRGLQFAIASAAGAPLTPHPHPLPHPHPH 297

[Close]

BLAST of Cp4.1LG02g12280 vs. ExPASy TrEMBL
Match: A0A6J1KEW0 (uncharacterized protein LOC111492629 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111492629 PE=4 SV=1)

HSP 1 Score: 598 bits (1542), Expect = 6.06e-216
Identity = 297/299 (99.33%), Postives = 297/299 (99.33%), Query Frame = 0


Query: 1   MGDHLVLYVDHLIRPVAPVQSVAEPVDPVPSAPREGVVDSAAAGPSCSTATVDHPTVEQD 60
           MGDHLVLYVDHLIRPVAPVQSVAEPVDPVPSAPREGVVDSAAAGPSCSTAT DHPTVEQD
Sbjct: 1   MGDHLVLYVDHLIRPVAPVQSVAEPVDPVPSAPREGVVDSAAAGPSCSTATADHPTVEQD 60

Query: 61  APNEEEPLIQVAECRICQEEDGINNLETPCACSGSLKYAHRKCVQHWCNEKGDIICEICH 120
           APNEEEPLIQVAECRICQEEDGINNLETPCACSGSLKYAHRKCVQHWCNEKGDIICEICH
Sbjct: 61  APNEEEPLIQVAECRICQEEDGINNLETPCACSGSLKYAHRKCVQHWCNEKGDIICEICH 120

Query: 121 QFYQPGYTAPSRSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEAEYDDYAASN 180
           QFYQPGYTAPSRSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEAEYDDYAASN
Sbjct: 121 QFYQPGYTAPSRSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEAEYDDYAASN 180

Query: 181 DSGAAFCRSAALILLALLLLRHALTITDPDGEDDASAFFSIFLLRAAGFLLPCYIMAWAI 240
           DSGAAFCRSAALILLALLLLRHALTITDPDGEDDASAFFSIFLLRAAGFLLPCYIMAWAI
Sbjct: 181 DSGAAFCRSAALILLALLLLRHALTITDPDGEDDASAFFSIFLLRAAGFLLPCYIMAWAI 240

Query: 241 SILQRRRQRQEAAAVAATQVAFVLQHGQHRSLQFAIASAAGAPLTPHPHPLPHPHPHTP 299
           SILQRRRQRQEAAAVAATQVAFVLQHGQHR LQFAIASAAGAPLTPHPHPLPHPHPHTP
Sbjct: 241 SILQRRRQRQEAAAVAATQVAFVLQHGQHRGLQFAIASAAGAPLTPHPHPLPHPHPHTP 299

[Close]

BLAST of Cp4.1LG02g12280 vs. ExPASy TrEMBL
Match: A0A6J1G9V2 (uncharacterized protein LOC111452273 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111452273 PE=4 SV=1)

HSP 1 Score: 596 bits (1536), Expect = 5.37e-215
Identity = 295/297 (99.33%), Postives = 296/297 (99.66%), Query Frame = 0


Query: 1   MGDHLVLYVDHLIRPVAPVQSVAEPVDPVPSAPREGVVDSAAAGPSCSTATVDHPTVEQD 60
           MGDHLVLYVDHLIRPVAPVQSVAEPVDP+PSAPREGVVDSAAAGPSCSTATVDHPTVEQD
Sbjct: 1   MGDHLVLYVDHLIRPVAPVQSVAEPVDPIPSAPREGVVDSAAAGPSCSTATVDHPTVEQD 60

Query: 61  APNEEEPLIQVAECRICQEEDGINNLETPCACSGSLKYAHRKCVQHWCNEKGDIICEICH 120
           APNEEEPLIQVAECRICQEEDGINNLETPCACSGSLKYAHRKCVQHWCNEKGDIICEICH
Sbjct: 61  APNEEEPLIQVAECRICQEEDGINNLETPCACSGSLKYAHRKCVQHWCNEKGDIICEICH 120

Query: 121 QFYQPGYTAPSRSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEAEYDDYAASN 180
           QFYQPGYTAPSRSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEAEYDDYAASN
Sbjct: 121 QFYQPGYTAPSRSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEAEYDDYAASN 180

Query: 181 DSGAAFCRSAALILLALLLLRHALTITDPDGEDDASAFFSIFLLRAAGFLLPCYIMAWAI 240
           DSGAAFCRSAALILLALLLLRHALTITDPDGEDDASAFFSIFLLRAAGFLLPCYIMAWAI
Sbjct: 181 DSGAAFCRSAALILLALLLLRHALTITDPDGEDDASAFFSIFLLRAAGFLLPCYIMAWAI 240

Query: 241 SILQRRRQRQEAAAVAATQVAFVLQHGQHRSLQFAIASAAGAPLTPHPHPLPHPHPH 297
           SILQRRRQRQEAAAVAATQVAFVLQHGQHR LQFAIASAAGAPLTPHPHPLPHPHPH
Sbjct: 241 SILQRRRQRQEAAAVAATQVAFVLQHGQHRGLQFAIASAAGAPLTPHPHPLPHPHPH 297

[Close]

BLAST of Cp4.1LG02g12280 vs. ExPASy TrEMBL
Match: A0A6J1K8E6 (uncharacterized protein LOC111492629 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492629 PE=4 SV=1)

HSP 1 Score: 593 bits (1530), Expect = 4.25e-214
Identity = 297/300 (99.00%), Postives = 297/300 (99.00%), Query Frame = 0


Query: 1   MGDHLVLYVDHLIRPVAPVQSVAEPVDPVPSAPREGVVDSAAAGPSCSTATVDHPTVEQD 60
           MGDHLVLYVDHLIRPVAPVQSVAEPVDPVPSAPREGVVDSAAAGPSCSTAT DHPTVEQD
Sbjct: 1   MGDHLVLYVDHLIRPVAPVQSVAEPVDPVPSAPREGVVDSAAAGPSCSTATADHPTVEQD 60

Query: 61  APNEEEPLIQVAECRICQEEDGINNLETPCACSGSLKYAHRKCVQHWCNEKGDIICEICH 120
           APNEEEPLIQVAECRICQEEDGINNLETPCACSGSLKYAHRKCVQHWCNEKGDIICEICH
Sbjct: 61  APNEEEPLIQVAECRICQEEDGINNLETPCACSGSLKYAHRKCVQHWCNEKGDIICEICH 120

Query: 121 QFYQPGYTAPSRSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEAEYDDYAASN 180
           QFYQPGYTAPSRSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEAEYDDYAASN
Sbjct: 121 QFYQPGYTAPSRSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEAEYDDYAASN 180

Query: 181 DSGAAFCRSAALILLALLLLRHALTITDPDGEDDASAFFSIFLLRAAGFLLPCYIMAWAI 240
           DSGAAFCRSAALILLALLLLRHALTITDPDGEDDASAFFSIFLLRAAGFLLPCYIMAWAI
Sbjct: 181 DSGAAFCRSAALILLALLLLRHALTITDPDGEDDASAFFSIFLLRAAGFLLPCYIMAWAI 240

Query: 241 SILQRRRQRQ-EAAAVAATQVAFVLQHGQHRSLQFAIASAAGAPLTPHPHPLPHPHPHTP 299
           SILQRRRQRQ EAAAVAATQVAFVLQHGQHR LQFAIASAAGAPLTPHPHPLPHPHPHTP
Sbjct: 241 SILQRRRQRQQEAAAVAATQVAFVLQHGQHRGLQFAIASAAGAPLTPHPHPLPHPHPHTP 300

[Close]

BLAST of Cp4.1LG02g12280 vs. ExPASy TrEMBL
Match: A0A6J1GAL0 (uncharacterized protein LOC111452273 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452273 PE=4 SV=1)

HSP 1 Score: 591 bits (1524), Expect = 3.76e-213
Identity = 295/298 (98.99%), Postives = 296/298 (99.33%), Query Frame = 0


Query: 1   MGDHLVLYVDHLIRPVAPVQSVAEPVDPVPSAPREGVVDSAAAGPSCSTATVDHPTVEQD 60
           MGDHLVLYVDHLIRPVAPVQSVAEPVDP+PSAPREGVVDSAAAGPSCSTATVDHPTVEQD
Sbjct: 1   MGDHLVLYVDHLIRPVAPVQSVAEPVDPIPSAPREGVVDSAAAGPSCSTATVDHPTVEQD 60

Query: 61  APNEEEPLIQVAECRICQEEDGINNLETPCACSGSLKYAHRKCVQHWCNEKGDIICEICH 120
           APNEEEPLIQVAECRICQEEDGINNLETPCACSGSLKYAHRKCVQHWCNEKGDIICEICH
Sbjct: 61  APNEEEPLIQVAECRICQEEDGINNLETPCACSGSLKYAHRKCVQHWCNEKGDIICEICH 120

Query: 121 QFYQPGYTAPSRSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEAEYDDYAASN 180
           QFYQPGYTAPSRSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEAEYDDYAASN
Sbjct: 121 QFYQPGYTAPSRSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEAEYDDYAASN 180

Query: 181 DSGAAFCRSAALILLALLLLRHALTITDPDGEDDASAFFSIFLLRAAGFLLPCYIMAWAI 240
           DSGAAFCRSAALILLALLLLRHALTITDPDGEDDASAFFSIFLLRAAGFLLPCYIMAWAI
Sbjct: 181 DSGAAFCRSAALILLALLLLRHALTITDPDGEDDASAFFSIFLLRAAGFLLPCYIMAWAI 240

Query: 241 SILQRRRQRQ-EAAAVAATQVAFVLQHGQHRSLQFAIASAAGAPLTPHPHPLPHPHPH 297
           SILQRRRQRQ EAAAVAATQVAFVLQHGQHR LQFAIASAAGAPLTPHPHPLPHPHPH
Sbjct: 241 SILQRRRQRQQEAAAVAATQVAFVLQHGQHRGLQFAIASAAGAPLTPHPHPLPHPHPH 298

[Close]

BLAST of Cp4.1LG02g12280 vs. ExPASy TrEMBL
Match: A0A6J1G4K7 (uncharacterized protein LOC111450687 OS=Cucurbita moschata OX=3662 GN=LOC111450687 PE=4 SV=1)

HSP 1 Score: 541 bits (1395), Expect = 5.19e-193
Identity = 272/297 (91.58%), Postives = 279/297 (93.94%), Query Frame = 0


Query: 1   MGDHLVLYVDHLIRPVAPVQSVAEPVDPVPSAPREGVVDSAAAGPSCSTATVDHPTVEQD 60
           M DHLVLYVDHLI PVAPVQ V++PVDPVPSAPREGV DSAAA PSCSTAT D  TVEQD
Sbjct: 1   MSDHLVLYVDHLIPPVAPVQPVSDPVDPVPSAPREGVSDSAAAIPSCSTATADDRTVEQD 60

Query: 61  APNEEEPLIQVAECRICQEEDGINNLETPCACSGSLKYAHRKCVQHWCNEKGDIICEICH 120
           APNEE+PLIQ AECRICQEED +NNLETPCACSGSLKYAHRKCVQHWCNEKGDI CEICH
Sbjct: 61  APNEEDPLIQAAECRICQEEDTLNNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICH 120

Query: 121 QFYQPGYTAPSRSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEAEYDDYAASN 180
           Q YQPGYTAP RSEET IDMEGRWTIAGNPLDLRDTRLLAIAEAER+FLEAEYDDYAASN
Sbjct: 121 QSYQPGYTAPPRSEETVIDMEGRWTIAGNPLDLRDTRLLAIAEAERNFLEAEYDDYAASN 180

Query: 181 DSGAAFCRSAALILLALLLLRHALTITDPDGEDDASAFFSIFLLRAAGFLLPCYIMAWAI 240
           DSGAAFCRSAALILLALLLLRHALTITDPDG+DDASAFFSIFLLRAAGFLLPCYIMAWAI
Sbjct: 181 DSGAAFCRSAALILLALLLLRHALTITDPDGDDDASAFFSIFLLRAAGFLLPCYIMAWAI 240

Query: 241 SILQRRRQRQEAAAVAATQVAFVLQHGQHRSLQFAIASAAGAPLTPHPHPLPHPHPH 297
           SILQRRRQRQEAAA+AATQVAFVLQHGQHR LQFAIASA G PLTPHPHP PHPHPH
Sbjct: 241 SILQRRRQRQEAAALAATQVAFVLQHGQHRGLQFAIASA-GPPLTPHPHPHPHPHPH 296

[Close]

BLAST of Cp4.1LG02g12280 vs. TAIR 10
Match: AT3G47550.3 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 307.0 bits (785), Expect = 1.7e-83
Identity = 171/296 (57.77%), Postives = 202/296 (68.24%), Query Frame = 0


Query: 1   MGDHLVLYVDHLIRPVAPVQSVAEPVDPVPSAPREGVVDSAAAGPSCSTATVDHPTVEQD 60
           M DHL L  D LI         +E +D    +   G       G   ++++V+   V ++
Sbjct: 1   MADHLSLCTDRLI--------TSESLDSEKDSDSSGESSYRPQGTDLASSSVNETEVPRE 60

Query: 61  ---APNEEEPLIQVAECRICQEEDGINNLETPCACSGSLKYAHRKCVQHWCNEKGDIICE 120
                +EEEPL+Q  ECRICQEED   NLE PCAC+GSLKYAHRKCVQ WCNEKGDI CE
Sbjct: 61  YYAVADEEEPLLQSVECRICQEEDSTKNLEAPCACNGSLKYAHRKCVQRWCNEKGDITCE 120

Query: 121 ICHQFYQPGYTA--PSRSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEAEYDD 180
           ICHQ YQ GYTA  P   +ET I +   W   G PLDL D R+LA+A AERHFLEA+YD+
Sbjct: 121 ICHQPYQHGYTAPPPPPPDETIIHIGDDWE-NGVPLDLTDPRILAMAAAERHFLEADYDE 180

Query: 181 YAASNDSGAAFCRSAALILLALLLLRHALTI-TDPDGEDDASAFFSIFLLRAAGFLLPCY 240
           Y+ +N SGAAFCRSAALIL+ALLLLR AL + T+PD EDD +AFFS+FLLRAAGFLLPCY
Sbjct: 181 YSENNSSGAAFCRSAALILMALLLLRDALNLTTNPDDEDDPTAFFSLFLLRAAGFLLPCY 240

Query: 241 IMAWAISILQRRRQRQEAAAVAATQVAFVLQHG--QHRSLQFAIASAAGAPLTPHP 289
           IMAWAI ILQRRRQRQEAAA+AA +V F++  G  Q R L FA+A        P P
Sbjct: 241 IMAWAIGILQRRRQRQEAAALAAAEVTFMIHGGGPQRRGLHFAVAPQPPISNVPTP 287

[Close]

BLAST of Cp4.1LG02g12280 vs. TAIR 10
Match: AT3G47550.6 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 307.0 bits (785), Expect = 1.7e-83
Identity = 171/296 (57.77%), Postives = 202/296 (68.24%), Query Frame = 0


Query: 1   MGDHLVLYVDHLIRPVAPVQSVAEPVDPVPSAPREGVVDSAAAGPSCSTATVDHPTVEQD 60
           M DHL L  D LI         +E +D    +   G       G   ++++V+   V ++
Sbjct: 1   MADHLSLCTDRLI--------TSESLDSEKDSDSSGESSYRPQGTDLASSSVNETEVPRE 60

Query: 61  ---APNEEEPLIQVAECRICQEEDGINNLETPCACSGSLKYAHRKCVQHWCNEKGDIICE 120
                +EEEPL+Q  ECRICQEED   NLE PCAC+GSLKYAHRKCVQ WCNEKGDI CE
Sbjct: 61  YYAVADEEEPLLQSVECRICQEEDSTKNLEAPCACNGSLKYAHRKCVQRWCNEKGDITCE 120

Query: 121 ICHQFYQPGYTA--PSRSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEAEYDD 180
           ICHQ YQ GYTA  P   +ET I +   W   G PLDL D R+LA+A AERHFLEA+YD+
Sbjct: 121 ICHQPYQHGYTAPPPPPPDETIIHIGDDWE-NGVPLDLTDPRILAMAAAERHFLEADYDE 180

Query: 181 YAASNDSGAAFCRSAALILLALLLLRHALTI-TDPDGEDDASAFFSIFLLRAAGFLLPCY 240
           Y+ +N SGAAFCRSAALIL+ALLLLR AL + T+PD EDD +AFFS+FLLRAAGFLLPCY
Sbjct: 181 YSENNSSGAAFCRSAALILMALLLLRDALNLTTNPDDEDDPTAFFSLFLLRAAGFLLPCY 240

Query: 241 IMAWAISILQRRRQRQEAAAVAATQVAFVLQHG--QHRSLQFAIASAAGAPLTPHP 289
           IMAWAI ILQRRRQRQEAAA+AA +V F++  G  Q R L FA+A        P P
Sbjct: 241 IMAWAIGILQRRRQRQEAAALAAAEVTFMIHGGGPQRRGLHFAVAPQPPISNVPTP 287

[Close]

BLAST of Cp4.1LG02g12280 vs. TAIR 10
Match: AT2G02960.2 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 305.4 bits (781), Expect = 4.9e-83
Identity = 161/235 (68.51%), Postives = 184/235 (78.30%), Query Frame = 0


Query: 58  EQDAPNEEEPLIQVAECRICQEEDGINNLETPCACSGSLKYAHRKCVQHWCNEKGDIICE 117
           + D  +E EPLI   ECRIC +E  + NLE+PCACSGSLKYAHRKCVQ WCNEKG+IICE
Sbjct: 27  DDDHDDENEPLIVSGECRICSDESPVENLESPCACSGSLKYAHRKCVQRWCNEKGNIICE 86

Query: 118 ICHQFYQPGYTAPS---RSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEAEYD 177
           ICHQ YQPGYTAP    + EET ID+ G WTI+G  LD+ D RLLAIAEAER +LE+EY 
Sbjct: 87  ICHQPYQPGYTAPPPPLQPEETTIDIGGGWTISG--LDVHDPRLLAIAEAERRYLESEYV 146

Query: 178 DYAASNDSGAAFCRSAALILLALLLLRHALTIT-DPDG-EDDASAFFSIFLLRAAGFLLP 237
           +Y AS+ SGAAFCRSAALIL+ALLLLRHALTIT D DG EDD S+  S+ LLRAAGFLLP
Sbjct: 147 EYTASSASGAAFCRSAALILMALLLLRHALTITDDTDGEEDDPSSILSLVLLRAAGFLLP 206

Query: 238 CYIMAWAISILQRRRQRQEAAAVAATQVAFVLQHGQHRSLQFAIASAAGAPLTPH 288
           CYIMAWAISILQRRRQRQEAAA+ ATQ A VLQ GQ R++ F ++    +    H
Sbjct: 207 CYIMAWAISILQRRRQRQEAAAL-ATQFALVLQSGQPRTVHFTVSPGISSSAVAH 258

[Close]

BLAST of Cp4.1LG02g12280 vs. TAIR 10
Match: AT2G02960.4 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 305.4 bits (781), Expect = 4.9e-83
Identity = 161/235 (68.51%), Postives = 184/235 (78.30%), Query Frame = 0


Query: 58  EQDAPNEEEPLIQVAECRICQEEDGINNLETPCACSGSLKYAHRKCVQHWCNEKGDIICE 117
           + D  +E EPLI   ECRIC +E  + NLE+PCACSGSLKYAHRKCVQ WCNEKG+IICE
Sbjct: 27  DDDHDDENEPLIVSGECRICSDESPVENLESPCACSGSLKYAHRKCVQRWCNEKGNIICE 86

Query: 118 ICHQFYQPGYTAPS---RSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEAEYD 177
           ICHQ YQPGYTAP    + EET ID+ G WTI+G  LD+ D RLLAIAEAER +LE+EY 
Sbjct: 87  ICHQPYQPGYTAPPPPLQPEETTIDIGGGWTISG--LDVHDPRLLAIAEAERRYLESEYV 146

Query: 178 DYAASNDSGAAFCRSAALILLALLLLRHALTIT-DPDG-EDDASAFFSIFLLRAAGFLLP 237
           +Y AS+ SGAAFCRSAALIL+ALLLLRHALTIT D DG EDD S+  S+ LLRAAGFLLP
Sbjct: 147 EYTASSASGAAFCRSAALILMALLLLRHALTITDDTDGEEDDPSSILSLVLLRAAGFLLP 206

Query: 238 CYIMAWAISILQRRRQRQEAAAVAATQVAFVLQHGQHRSLQFAIASAAGAPLTPH 288
           CYIMAWAISILQRRRQRQEAAA+ ATQ A VLQ GQ R++ F ++    +    H
Sbjct: 207 CYIMAWAISILQRRRQRQEAAAL-ATQFALVLQSGQPRTVHFTVSPGISSSAVAH 258

[Close]

BLAST of Cp4.1LG02g12280 vs. TAIR 10
Match: AT2G02960.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 305.4 bits (781), Expect = 4.9e-83
Identity = 161/235 (68.51%), Postives = 184/235 (78.30%), Query Frame = 0


Query: 58  EQDAPNEEEPLIQVAECRICQEEDGINNLETPCACSGSLKYAHRKCVQHWCNEKGDIICE 117
           + D  +E EPLI   ECRIC +E  + NLE+PCACSGSLKYAHRKCVQ WCNEKG+IICE
Sbjct: 27  DDDHDDENEPLIVSGECRICSDESPVENLESPCACSGSLKYAHRKCVQRWCNEKGNIICE 86

Query: 118 ICHQFYQPGYTAPS---RSEETAIDMEGRWTIAGNPLDLRDTRLLAIAEAERHFLEAEYD 177
           ICHQ YQPGYTAP    + EET ID+ G WTI+G  LD+ D RLLAIAEAER +LE+EY 
Sbjct: 87  ICHQPYQPGYTAPPPPLQPEETTIDIGGGWTISG--LDVHDPRLLAIAEAERRYLESEYV 146

Query: 178 DYAASNDSGAAFCRSAALILLALLLLRHALTIT-DPDG-EDDASAFFSIFLLRAAGFLLP 237
           +Y AS+ SGAAFCRSAALIL+ALLLLRHALTIT D DG EDD S+  S+ LLRAAGFLLP
Sbjct: 147 EYTASSASGAAFCRSAALILMALLLLRHALTITDDTDGEEDDPSSILSLVLLRAAGFLLP 206

Query: 238 CYIMAWAISILQRRRQRQEAAAVAATQVAFVLQHGQHRSLQFAIASAAGAPLTPH 288
           CYIMAWAISILQRRRQRQEAAA+ ATQ A VLQ GQ R++ F ++    +    H
Sbjct: 207 CYIMAWAISILQRRRQRQEAAAL-ATQFALVLQSGQPRTVHFTVSPGISSSAVAH 258

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g12280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JKK0	1.1e-07	40.86	Probable E3 ubiquitin ligase SUD1 OS=Arabidopsis thaliana OX=3702 GN=SUD1 PE=1 S...	[more]
Q0IH10	7.3e-07	42.55	E3 ubiquitin-protein ligase MARCHF3 OS=Xenopus laevis OX=8355 GN=marchf3 PE=2 SV...	[more]
Q68FA7	7.3e-07	42.55	E3 ubiquitin-protein ligase MARCHF3 OS=Xenopus tropicalis OX=8364 GN=marchf3 PE=...	[more]
Q99M02	3.6e-06	40.43	E3 ubiquitin-protein ligase MARCHF2 OS=Mus musculus OX=10090 GN=MARCHF2 PE=2 SV=...	[more]
Q5I0I2	3.6e-06	40.43	E3 ubiquitin-protein ligase MARCHF2 OS=Rattus norvegicus OX=10116 GN=Marchf2 PE=...	[more]

BLAST of Cp4.1LG02g12280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023523368.1	1.85e-217	100.00	uncharacterized protein LOC111787585 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022997773.1	1.25e-215	99.33	uncharacterized protein LOC111492629 isoform X2 [Cucurbita maxima]	[more]
XP_023523367.1	1.30e-215	99.67	uncharacterized protein LOC111787585 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022948671.1	1.11e-214	99.33	uncharacterized protein LOC111452273 isoform X2 [Cucurbita moschata]	[more]
KAG7036813.1	3.18e-214	99.33	putative E3 ubiquitin ligase SUD1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Cp4.1LG02g12280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KEW0	6.06e-216	99.33	uncharacterized protein LOC111492629 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1G9V2	5.37e-215	99.33	uncharacterized protein LOC111452273 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1K8E6	4.25e-214	99.00	uncharacterized protein LOC111492629 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1GAL0	3.76e-213	98.99	uncharacterized protein LOC111452273 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1G4K7	5.19e-193	91.58	uncharacterized protein LOC111450687 OS=Cucurbita moschata OX=3662 GN=LOC1114506...	[more]

BLAST of Cp4.1LG02g12280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47550.3	1.7e-83	57.77	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT3G47550.6	1.7e-83	57.77	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G02960.2	4.9e-83	68.51	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G02960.4	4.9e-83	68.51	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G02960.1	4.9e-83	68.51	RING/FYVE/PHD zinc finger superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 159..179
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..49
None	No IPR available	PANTHER	PTHR23012:SF181	E3 UBIQUITIN-PROTEIN LIGASE MARCH-RELATED	coord: 1..276
None	No IPR available	CDD	cd16495	RING_CH-C4HC3_MARCH	coord: 74..120 e-value: 2.71047E-18 score: 75.0564
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 72..124
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 73..120 e-value: 7.1E-20 score: 82.0
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 74..119 e-value: 1.5E-12 score: 47.4
IPR011016	Zinc finger, RING-CH-type	PROSITE	PS51292	ZF_RING_CH	coord: 66..126 score: 21.962624
IPR022143	Protein of unknown function DUF3675	PFAM	PF12428	DUF3675	coord: 125..240 e-value: 1.1E-42 score: 145.4
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 59..130 e-value: 1.0E-18 score: 68.6
IPR033275	E3 ubiquitin-protein ligase MARCH-like	PANTHER	PTHR23012	RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING	coord: 1..276

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG02g12280.1	Cp4.1LG02g12280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004842	ubiquitin-protein transferase activity
molecular_function	GO:0008270	zinc ion binding