Cp4.1LG02g11220 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG02g11220
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Epidermal patterning factor-like protein
Location	Cp4.1LG02: 10280360 .. 10282870 (+)
RNA-Seq Expression	Cp4.1LG02g11220
Synteny	Cp4.1LG02g11220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAGGTTTTTAGAAACAGGTGCAGGCAGTGGAGGAGGTAGAGCAGAGATAATCTCAGCAGCAGCCTGTGCGTTGTTTTTGTATTTCTTCATTTGGAAATCATTGAAAGAAGGAACACCAAAACCCCTGCAAAAGTTGGACATGGCAGTCCTAAGCCATCCACAGCCAAATCATATCAGATTCTTCCCCTTCTTAAACTTCATCTGATCTTCACCTCACTCAAAATTTCTTGATCCTCTGCTGATGGAGCTGAGTAGAAACACACTCACCGAGACGAAAACCGCTCATAAATCCTTCTCGTTCTTGTTCTTGTTCTTGTTCTTGATATCATTCTGGTGCAGCATGATATCTAGTGCAGGTCCAGGTGATATCTAGTTTTACCTCTAAACCTCTATGGATATCTCTGATCTCCTCTGATGGATATCTGTTCTTATTTTTCTTCAGATAATAGGTGCTGTTCATCTGCTAAAGCTGGCCATACAAATCTCCAGGTAAATTTCTACTTTACTTTTAATACAGTACTACTTCATATGATGATCCTATGATTTGTGTTTATGTTATGCAGTAGCTGTTTCTTCAATGATAATTACAAAATAGCCATCCCCCTGTATTGGTAGGTAGCCAGCTAGAAGCCTTGTTTGTAAATGCACACAAAACTCATAATTCCGGCCCTTCCAAGGCTGGCGCTGAGCCACTGACCCTCCTCCACCTTAGAACCTTGAAAATGATTGTGTCAGCTGGCACGTCACGATCCATCGATATAACACGTCTCTCGTATTTTTGTAATAATATGATCATAATGTAACAACTCAAGTCTACCACTAGCAGATATTGTTCTTCCTAGGGAGAAATTTCTATACCCTTAAAAAGAATGCTTCGTTCTCCTTAGGATCTCACAATCCACCCTCTTCGGGGCCCAACGTCCTTGCTGTCACACCACCTTGTGTCCACCTCCCTTCGAGGCTCAACCTTTTCACTGACACATCGTCCGGTGTCTAGCTTTGATACCATTGTAACAACCCAAGCCCACCACTAACAGATATTGTCCTCTTTGGGCTTTTCTTGTGTCCACCTCCCTTTAGGGCTCAGCCTCCTCACTGGTACATCGTCCGGTGTTTAGCTCTGATACCATTGTAACAGCCCAAACCTACGACTAACAGATATTGTCATCTTTGGGCTTTCCTTTTATCCATCTCCTTTCGGGGCTCAGCCTCCTCACTGGCACATCGTCCGGTGTCTAGCTCTGATACTATTGTAACAGCCTAAGCTCACCGCTAACATATATTGTTCTCTTTGGGTTTTTCTTGTGTCCACCTCCCTTCGGAGCTCAGCCTTCTCACGGGCACATCATTCAATGTCTAGCTCTGATATCATTGTAACAACCCAAGCCCACCACTAACAAATATTGTCCTCTTTGGGCTTTTCGTTTCGGGTTTCCCAAGTTTTTAAAACGCGTCTGCTAGAGAAAAGTTCCCATGCCCTTATAAAAAATGTTCGTTCTCCTCCCCAATCAATGTGGGATCTCACAATCTACCTTTATTCTGGACCCAGTGTCCTCGCTGACACACCTCCTTGTGTCCACCTCCTTCGGGGCTCAGTTTCCTCACTGGCACATCGCCCAGTGTCTAGCTCTGATAATATTGTAACAACCCAAGCCCAATGCTAATAGATATTGTCTCTTTGGGCTTTCCCCCACGGTTTTTAAAACGCTTCTGCTAGAGAGAAGCTTTGTTTACTTTGATCAGATAAGTATCTCACGTGAAATAATTATGCTCACTAGTCCAAAATGGTCGTGTCATGCTAGCCTATCTTTGTCTCCATAATGATATGATATTGTTAGTTAAAGCCGGTAAACACTTATAGATCATTCTTCTTAGATAATTTAATGTTCCAAGTCGTGTGAAGCTATGGTTTCTTGGACGAGCAAAATACGTGGACATGATTATATTCGACACCTAAGGATTCTATTTCCATGTCATCTCGACAGCTTACCAATCGCTTAATAATGAATAAACATACGGTGCTTTAATATTGACATTTTTCACTACCAGCCCATCACTAGTAGTGCAACATGGAAGCTGCCAGCCGACGGAAGAAGGGTGGCGCAGCCCGCCACGGCGGAGGTGGTCATAGGAGATCATGAAGATCAAGAGTTGAGGACGTTGGCAAGAAGAGAATTGGGTGGGCCTGGATCGTCGCCGCCACGGTGCGCGTCAATGTGTGGGAAGTGCACGCCGTGCACGGCGGTTCATGTCCCGGTGCCGCCGGGAACTCCGGTGACGGCTGAGTATTACCCGGAAGCTTGGAGATGCAAATGTGGGAACAAGCTTTACATGCCCTGATCGGAAAATGCATGCGCCGGTCGCCGGCAGCCGCCTTTCTGTTGCTCGCCGTCGTTTACTTATGTTAGCGTATTATTCATCCGCCGATGAACCGGCGTGAAAAACCATGAATTTCCCTGTGCTAATATATGATGAAATATGTAATATATGTGTGTGTTTACTTAATTAAT

mRNA sequence

AGAGGTTTTTAGAAACAGGTGCAGGCAGTGGAGGAGGTAGAGCAGAGATAATCTCAGCAGCAGCCTGTGCGTTGTTTTTGTATTTCTTCATTTGGAAATCATTGAAAGAAGGAACACCAAAACCCCTGCAAAAGTTGGACATGGCAGTCCTAAGCCATCCACAGCCAAATCATATCAGATTCTTCCCCTTCTTAAACTTCATCTGATCTTCACCTCACTCAAAATTTCTTGATCCTCTGCTGATGGAGCTGAGTAGAAACACACTCACCGAGACGAAAACCGCTCATAAATCCTTCTCGTTCTTGTTCTTGTTCTTGTTCTTGATATCATTCTGGTGCAGCATGATATCTAGTGCAGGTCCAGATAATAGGTGCTGTTCATCTGCTAAAGCTGGCCATACAAATCTCCAGCCCATCACTAGTAGTGCAACATGGAAGCTGCCAGCCGACGGAAGAAGGGTGGCGCAGCCCGCCACGGCGGAGGTGGTCATAGGAGATCATGAAGATCAAGAGTTGAGGACGTTGGCAAGAAGAGAATTGGGTGGGCCTGGATCGTCGCCGCCACGGTGCGCGTCAATGTGTGGGAAGTGCACGCCGTGCACGGCGGTTCATGTCCCGGTGCCGCCGGGAACTCCGGTGACGGCTGAGTATTACCCGGAAGCTTGGAGATGCAAATGTGGGAACAAGCTTTACATGCCCTGATCGGAAAATGCATGCGCCGGTCGCCGGCAGCCGCCTTTCTGTTGCTCGCCGTCGTTTACTTATGTTAGCGTATTATTCATCCGCCGATGAACCGGCGTGAAAAACCATGAATTTCCCTGTGCTAATATATGATGAAATATGTAATATATGTGTGTGTTTACTTAATTAAT

Coding sequence (CDS)

ATGGAGCTGAGTAGAAACACACTCACCGAGACGAAAACCGCTCATAAATCCTTCTCGTTCTTGTTCTTGTTCTTGTTCTTGATATCATTCTGGTGCAGCATGATATCTAGTGCAGGTCCAGATAATAGGTGCTGTTCATCTGCTAAAGCTGGCCATACAAATCTCCAGCCCATCACTAGTAGTGCAACATGGAAGCTGCCAGCCGACGGAAGAAGGGTGGCGCAGCCCGCCACGGCGGAGGTGGTCATAGGAGATCATGAAGATCAAGAGTTGAGGACGTTGGCAAGAAGAGAATTGGGTGGGCCTGGATCGTCGCCGCCACGGTGCGCGTCAATGTGTGGGAAGTGCACGCCGTGCACGGCGGTTCATGTCCCGGTGCCGCCGGGAACTCCGGTGACGGCTGAGTATTACCCGGAAGCTTGGAGATGCAAATGTGGGAACAAGCTTTACATGCCCTGA

Protein sequence

MELSRNTLTETKTAHKSFSFLFLFLFLISFWCSMISSAGPDNRCCSSAKAGHTNLQPITSSATWKLPADGRRVAQPATAEVVIGDHEDQELRTLARRELGGPGSSPPRCASMCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP

Homology

[Close]

BLAST of Cp4.1LG02g11220 vs. ExPASy Swiss-Prot
Match: Q1PEY6 (EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EPFL6 PE=1 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.1e-24
Identity = 64/148 (43.24%), Postives = 83/148 (56.08%), Query Frame = 0


Query: 9   TETKTAHKSFSFLFLFLFLI----SFWCSMISSAGPDNRCCSSAKAGHTNLQPITSSATW 68
           +E   A  S  +L L  F++    +F  +  S++ P NR  +S   G+           +
Sbjct: 24  SENTRAKFSLFYLLLLFFVLCVIATFTITPTSTSSPYNRNSNSGTLGN-----------F 83

Query: 69  KLPADGRRVAQPATAEVVIGDHEDQELRTLARRELGGPGSSPPRCASMCGKCTPCTAVHV 128
               +G+          +    ++ ELR + R    G GSSPPRC+S CG+CTPC  VHV
Sbjct: 84  YAKEEGKSTVVIKKTRKIGDRSKEAELRRILR----GLGSSPPRCSSKCGRCTPCKPVHV 143

Query: 129 PVPPGTPVTAEYYPEAWRCKCGNKLYMP 153
           PVPPGTPVTAEYYPEAWRCKCGNKLYMP
Sbjct: 144 PVPPGTPVTAEYYPEAWRCKCGNKLYMP 156

[Close]

BLAST of Cp4.1LG02g11220 vs. ExPASy Swiss-Prot
Match: Q2V3I3 (EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=EPFL4 PE=1 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.7e-20
Identity = 47/92 (51.09%), Postives = 58/92 (63.04%), Query Frame = 0


Query: 61  SATWKLPADGRRVAQPATAEVVIGDHEDQELRTLARRELGGPGSSPPRCASMCGKCTPCT 120
           SA+  + ADGR + Q   +++  G          + +  GGPGSSPP C S CGKC PC 
Sbjct: 25  SASSIVSADGRWIGQRTGSDLPGG-------FIRSNKRFGGPGSSPPTCRSKCGKCQPCK 84

Query: 121 AVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 153
            VHVP+ PG  +  EYYPEAWRCKCGNKL+MP
Sbjct: 85  PVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 109

[Close]

BLAST of Cp4.1LG02g11220 vs. ExPASy Swiss-Prot
Match: Q9LUH9 (EPIDERMAL PATTERNING FACTOR-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=EPFL5 PE=1 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.9e-19
Identity = 39/57 (68.42%), Postives = 44/57 (77.19%), Query Frame = 0


Query: 96  RRELGGPGSSPPRCASMCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 153
           ++ LGGPGS PP C   CGKC PC AVHVP+ PG  +  EYYPEAWRCKCGNKL+MP
Sbjct: 51  QKRLGGPGSVPPMCRLKCGKCEPCKAVHVPIQPGLIMPLEYYPEAWRCKCGNKLFMP 107

[Close]

BLAST of Cp4.1LG02g11220 vs. ExPASy Swiss-Prot
Match: Q7M1E7 (Polygalacturonase OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 5.3e-06
Identity = 22/49 (44.90%), Postives = 27/49 (55.10%), Query Frame = 0


Query: 104 SSPPRCASMCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 153
           SSPP C + C  C PC    + V P  P   +YYP+ W C C NK+Y P
Sbjct: 468 SSPPNCKNKCKGCQPCKPKLIIVHPNKP--QDYYPQKWVCSCHNKIYNP 514

[Close]

BLAST of Cp4.1LG02g11220 vs. ExPASy Swiss-Prot
Match: Q9FY19 (Polygalacturonase OS=Juniperus ashei OX=13101 GN=JNA2 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 5.3e-06
Identity = 22/49 (44.90%), Postives = 27/49 (55.10%), Query Frame = 0


Query: 104 SSPPRCASMCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 153
           SSPP C + C  C PC    + V P  P   +YYP+ W C C NK+Y P
Sbjct: 461 SSPPNCKNKCKGCQPCKPKLIIVHPNQP--EDYYPQRWVCSCHNKIYNP 507

[Close]

BLAST of Cp4.1LG02g11220 vs. NCBI nr
Match: XP_023525345.1 (EPIDERMAL PATTERNING FACTOR-like protein 4 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 323 bits (827), Expect = 1.50e-111
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MELSRNTLTETKTAHKSFSFLFLFLFLISFWCSMISSAGPDNRCCSSAKAGHTNLQPITS 60
           MELSRNTLTETKTAHKSFSFLFLFLFLISFWCSMISSAGPDNRCCSSAKAGHTNLQPITS
Sbjct: 1   MELSRNTLTETKTAHKSFSFLFLFLFLISFWCSMISSAGPDNRCCSSAKAGHTNLQPITS 60

Query: 61  SATWKLPADGRRVAQPATAEVVIGDHEDQELRTLARRELGGPGSSPPRCASMCGKCTPCT 120
           SATWKLPADGRRVAQPATAEVVIGDHEDQELRTLARRELGGPGSSPPRCASMCGKCTPCT
Sbjct: 61  SATWKLPADGRRVAQPATAEVVIGDHEDQELRTLARRELGGPGSSPPRCASMCGKCTPCT 120

Query: 121 AVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 152
           AVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP
Sbjct: 121 AVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 152

[Close]

BLAST of Cp4.1LG02g11220 vs. NCBI nr
Match: XP_023525346.1 (EPIDERMAL PATTERNING FACTOR-like protein 4 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 312 bits (800), Expect = 1.84e-107
Identity = 150/152 (98.68%), Postives = 150/152 (98.68%), Query Frame = 0


Query: 1   MELSRNTLTETKTAHKSFSFLFLFLFLISFWCSMISSAGPDNRCCSSAKAGHTNLQPITS 60
           MELSRNTLTETKTAHKSFSFLFLFLFLISFWCSMISSA  DNRCCSSAKAGHTNLQPITS
Sbjct: 1   MELSRNTLTETKTAHKSFSFLFLFLFLISFWCSMISSA--DNRCCSSAKAGHTNLQPITS 60

Query: 61  SATWKLPADGRRVAQPATAEVVIGDHEDQELRTLARRELGGPGSSPPRCASMCGKCTPCT 120
           SATWKLPADGRRVAQPATAEVVIGDHEDQELRTLARRELGGPGSSPPRCASMCGKCTPCT
Sbjct: 61  SATWKLPADGRRVAQPATAEVVIGDHEDQELRTLARRELGGPGSSPPRCASMCGKCTPCT 120

Query: 121 AVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 152
           AVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP
Sbjct: 121 AVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 150

[Close]

BLAST of Cp4.1LG02g11220 vs. NCBI nr
Match: XP_022997734.1 (EPIDERMAL PATTERNING FACTOR-like protein 4 isoform X1 [Cucurbita maxima])

HSP 1 Score: 310 bits (795), Expect = 1.14e-106
Identity = 147/152 (96.71%), Postives = 148/152 (97.37%), Query Frame = 0


Query: 1   MELSRNTLTETKTAHKSFSFLFLFLFLISFWCSMISSAGPDNRCCSSAKAGHTNLQPITS 60
           MELSRNTLTETKTAHKSFSFLFLFL LISF CSMISSAGPDNRCCSSAKAGHTNLQPITS
Sbjct: 1   MELSRNTLTETKTAHKSFSFLFLFLILISFSCSMISSAGPDNRCCSSAKAGHTNLQPITS 60

Query: 61  SATWKLPADGRRVAQPATAEVVIGDHEDQELRTLARRELGGPGSSPPRCASMCGKCTPCT 120
           SATWKLPADGRRVAQP  AEVV+GDHEDQELRTLARRELGGPGSSPPRCASMCGKCTPCT
Sbjct: 61  SATWKLPADGRRVAQPNAAEVVVGDHEDQELRTLARRELGGPGSSPPRCASMCGKCTPCT 120

Query: 121 AVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 152
           AVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP
Sbjct: 121 AVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 152

[Close]

BLAST of Cp4.1LG02g11220 vs. NCBI nr
Match: XP_022948421.1 (EPIDERMAL PATTERNING FACTOR-like protein 4 isoform X1 [Cucurbita moschata])

HSP 1 Score: 306 bits (784), Expect = 5.83e-105
Identity = 147/154 (95.45%), Postives = 148/154 (96.10%), Query Frame = 0


Query: 1   MELSRNTLTETKTAHKSFSFLFLFLFLI--SFWCSMISSAGPDNRCCSSAKAGHTNLQPI 60
           MEL RNTLTETKTAHKSFSF FLFLFLI  SF CSMISSAGPDNRCCSSAKAGHTNLQPI
Sbjct: 1   MELRRNTLTETKTAHKSFSFSFLFLFLILISFSCSMISSAGPDNRCCSSAKAGHTNLQPI 60

Query: 61  TSSATWKLPADGRRVAQPATAEVVIGDHEDQELRTLARRELGGPGSSPPRCASMCGKCTP 120
           TSSATWKLPADGRRVAQPATAEVV+GDHEDQELRTLARRELGGPGSSPPRC SMCGKCTP
Sbjct: 61  TSSATWKLPADGRRVAQPATAEVVVGDHEDQELRTLARRELGGPGSSPPRCTSMCGKCTP 120

Query: 121 CTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 152
           CTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP
Sbjct: 121 CTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 154

[Close]

BLAST of Cp4.1LG02g11220 vs. NCBI nr
Match: KAG6607365.1 (EPIDERMAL PATTERNING FACTOR-like protein 6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 306 bits (783), Expect = 8.29e-105
Identity = 147/154 (95.45%), Postives = 148/154 (96.10%), Query Frame = 0


Query: 1   MELSRNTLTETKTAHKSFSFLFLFLFLI--SFWCSMISSAGPDNRCCSSAKAGHTNLQPI 60
           MELSRNTLTETKTAHKSFSF F FLFLI  SF CSMISSAGPDNRCCSSAKAGHTNLQPI
Sbjct: 1   MELSRNTLTETKTAHKSFSFSFSFLFLILISFSCSMISSAGPDNRCCSSAKAGHTNLQPI 60

Query: 61  TSSATWKLPADGRRVAQPATAEVVIGDHEDQELRTLARRELGGPGSSPPRCASMCGKCTP 120
           TSSATWKLPADGRRVAQPATAEVV+GDHEDQELRTLARRELGGPGSSPPRC SMCGKCTP
Sbjct: 61  TSSATWKLPADGRRVAQPATAEVVVGDHEDQELRTLARRELGGPGSSPPRCTSMCGKCTP 120

Query: 121 CTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 152
           CTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP
Sbjct: 121 CTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 154

[Close]

BLAST of Cp4.1LG02g11220 vs. ExPASy TrEMBL
Match: A0A6J1KCE5 (Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC111492606 PE=3 SV=1)

HSP 1 Score: 310 bits (795), Expect = 5.54e-107
Identity = 147/152 (96.71%), Postives = 148/152 (97.37%), Query Frame = 0


Query: 1   MELSRNTLTETKTAHKSFSFLFLFLFLISFWCSMISSAGPDNRCCSSAKAGHTNLQPITS 60
           MELSRNTLTETKTAHKSFSFLFLFL LISF CSMISSAGPDNRCCSSAKAGHTNLQPITS
Sbjct: 1   MELSRNTLTETKTAHKSFSFLFLFLILISFSCSMISSAGPDNRCCSSAKAGHTNLQPITS 60

Query: 61  SATWKLPADGRRVAQPATAEVVIGDHEDQELRTLARRELGGPGSSPPRCASMCGKCTPCT 120
           SATWKLPADGRRVAQP  AEVV+GDHEDQELRTLARRELGGPGSSPPRCASMCGKCTPCT
Sbjct: 61  SATWKLPADGRRVAQPNAAEVVVGDHEDQELRTLARRELGGPGSSPPRCASMCGKCTPCT 120

Query: 121 AVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 152
           AVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP
Sbjct: 121 AVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 152

[Close]

BLAST of Cp4.1LG02g11220 vs. ExPASy TrEMBL
Match: A0A6J1G961 (Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111452110 PE=3 SV=1)

HSP 1 Score: 306 bits (784), Expect = 2.82e-105
Identity = 147/154 (95.45%), Postives = 148/154 (96.10%), Query Frame = 0


Query: 1   MELSRNTLTETKTAHKSFSFLFLFLFLI--SFWCSMISSAGPDNRCCSSAKAGHTNLQPI 60
           MEL RNTLTETKTAHKSFSF FLFLFLI  SF CSMISSAGPDNRCCSSAKAGHTNLQPI
Sbjct: 1   MELRRNTLTETKTAHKSFSFSFLFLFLILISFSCSMISSAGPDNRCCSSAKAGHTNLQPI 60

Query: 61  TSSATWKLPADGRRVAQPATAEVVIGDHEDQELRTLARRELGGPGSSPPRCASMCGKCTP 120
           TSSATWKLPADGRRVAQPATAEVV+GDHEDQELRTLARRELGGPGSSPPRC SMCGKCTP
Sbjct: 61  TSSATWKLPADGRRVAQPATAEVVVGDHEDQELRTLARRELGGPGSSPPRCTSMCGKCTP 120

Query: 121 CTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 152
           CTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP
Sbjct: 121 CTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 154

[Close]

BLAST of Cp4.1LG02g11220 vs. ExPASy TrEMBL
Match: A0A6J1KAS0 (Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC111492606 PE=3 SV=1)

HSP 1 Score: 300 bits (768), Expect = 6.78e-103
Identity = 145/152 (95.39%), Postives = 146/152 (96.05%), Query Frame = 0


Query: 1   MELSRNTLTETKTAHKSFSFLFLFLFLISFWCSMISSAGPDNRCCSSAKAGHTNLQPITS 60
           MELSRNTLTETKTAHKSFSFLFLFL LISF CSMISSA  DNRCCSSAKAGHTNLQPITS
Sbjct: 1   MELSRNTLTETKTAHKSFSFLFLFLILISFSCSMISSA--DNRCCSSAKAGHTNLQPITS 60

Query: 61  SATWKLPADGRRVAQPATAEVVIGDHEDQELRTLARRELGGPGSSPPRCASMCGKCTPCT 120
           SATWKLPADGRRVAQP  AEVV+GDHEDQELRTLARRELGGPGSSPPRCASMCGKCTPCT
Sbjct: 61  SATWKLPADGRRVAQPNAAEVVVGDHEDQELRTLARRELGGPGSSPPRCASMCGKCTPCT 120

Query: 121 AVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 152
           AVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP
Sbjct: 121 AVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 150

[Close]

BLAST of Cp4.1LG02g11220 vs. ExPASy TrEMBL
Match: A0A6J1G964 (Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111452110 PE=3 SV=1)

HSP 1 Score: 296 bits (757), Expect = 3.46e-101
Identity = 145/154 (94.16%), Postives = 146/154 (94.81%), Query Frame = 0


Query: 1   MELSRNTLTETKTAHKSFSFLFLFLFLI--SFWCSMISSAGPDNRCCSSAKAGHTNLQPI 60
           MEL RNTLTETKTAHKSFSF FLFLFLI  SF CSMISSA  DNRCCSSAKAGHTNLQPI
Sbjct: 1   MELRRNTLTETKTAHKSFSFSFLFLFLILISFSCSMISSA--DNRCCSSAKAGHTNLQPI 60

Query: 61  TSSATWKLPADGRRVAQPATAEVVIGDHEDQELRTLARRELGGPGSSPPRCASMCGKCTP 120
           TSSATWKLPADGRRVAQPATAEVV+GDHEDQELRTLARRELGGPGSSPPRC SMCGKCTP
Sbjct: 61  TSSATWKLPADGRRVAQPATAEVVVGDHEDQELRTLARRELGGPGSSPPRCTSMCGKCTP 120

Query: 121 CTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 152
           CTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP
Sbjct: 121 CTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 152

[Close]

BLAST of Cp4.1LG02g11220 vs. ExPASy TrEMBL
Match: A0A0A0LXR9 (Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_1G533610 PE=3 SV=1)

HSP 1 Score: 143 bits (360), Expect = 7.67e-41
Identity = 77/139 (55.40%), Postives = 86/139 (61.87%), Query Frame = 0


Query: 18  FSFLFLFLFLISFWCSMISSA----GPDNRCCSSAKAGHTNLQPITSSATWKLPADGRRV 77
           F FLFL +F++S +CS I S+      + R CS                       G+ V
Sbjct: 30  FFFLFLMVFILSSFCSSIMSSYNGDSDNTRSCSF----------------------GKSV 89

Query: 78  AQPATAEVVIGDHEDQELRTLARRELGGPGSSPPRCASMCGKCTPCTAVHVPVPPGTPVT 137
                A      H+DQ +R L RR LGGPGSSPPRCAS CGKCTPCTAVHVPVPPGTPVT
Sbjct: 90  QYSIIANCEDDHHQDQFMR-LPRRGLGGPGSSPPRCASKCGKCTPCTAVHVPVPPGTPVT 145

Query: 138 AEYYPEAWRCKCGNKLYMP 152
           AEYYPEAWRCKCGNKLYMP
Sbjct: 150 AEYYPEAWRCKCGNKLYMP 145

[Close]

BLAST of Cp4.1LG02g11220 vs. TAIR 10
Match: AT2G30370.1 (allergen-related )

HSP 1 Score: 115.5 bits (288), Expect = 3.6e-26
Identity = 50/65 (76.92%), Postives = 53/65 (81.54%), Query Frame = 0


Query: 88  DQELRTLARRELGGPGSSPPRCASMCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGN 147
           D+      RR L G GSSPPRC+S CG+CTPC  VHVPVPPGTPVTAEYYPEAWRCKCGN
Sbjct: 166 DRSKEAELRRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGN 225

Query: 148 KLYMP 153
           KLYMP
Sbjct: 226 KLYMP 230

[Close]

BLAST of Cp4.1LG02g11220 vs. TAIR 10
Match: AT2G30370.2 (allergen-related )

HSP 1 Score: 114.4 bits (285), Expect = 8.1e-26
Identity = 64/148 (43.24%), Postives = 83/148 (56.08%), Query Frame = 0


Query: 9   TETKTAHKSFSFLFLFLFLI----SFWCSMISSAGPDNRCCSSAKAGHTNLQPITSSATW 68
           +E   A  S  +L L  F++    +F  +  S++ P NR  +S   G+           +
Sbjct: 24  SENTRAKFSLFYLLLLFFVLCVIATFTITPTSTSSPYNRNSNSGTLGN-----------F 83

Query: 69  KLPADGRRVAQPATAEVVIGDHEDQELRTLARRELGGPGSSPPRCASMCGKCTPCTAVHV 128
               +G+          +    ++ ELR + R    G GSSPPRC+S CG+CTPC  VHV
Sbjct: 84  YAKEEGKSTVVIKKTRKIGDRSKEAELRRILR----GLGSSPPRCSSKCGRCTPCKPVHV 143

Query: 129 PVPPGTPVTAEYYPEAWRCKCGNKLYMP 153
           PVPPGTPVTAEYYPEAWRCKCGNKLYMP
Sbjct: 144 PVPPGTPVTAEYYPEAWRCKCGNKLYMP 156

[Close]

BLAST of Cp4.1LG02g11220 vs. TAIR 10
Match: AT4G14723.1 (BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 100.5 bits (249), Expect = 1.2e-21
Identity = 47/92 (51.09%), Postives = 58/92 (63.04%), Query Frame = 0


Query: 61  SATWKLPADGRRVAQPATAEVVIGDHEDQELRTLARRELGGPGSSPPRCASMCGKCTPCT 120
           SA+  + ADGR + Q   +++  G          + +  GGPGSSPP C S CGKC PC 
Sbjct: 25  SASSIVSADGRWIGQRTGSDLPGG-------FIRSNKRFGGPGSSPPTCRSKCGKCQPCK 84

Query: 121 AVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 153
            VHVP+ PG  +  EYYPEAWRCKCGNKL+MP
Sbjct: 85  PVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 109

[Close]

BLAST of Cp4.1LG02g11220 vs. TAIR 10
Match: AT3G22820.1 (allergen-related )

HSP 1 Score: 97.1 bits (240), Expect = 1.3e-20
Identity = 39/57 (68.42%), Postives = 44/57 (77.19%), Query Frame = 0


Query: 96  RRELGGPGSSPPRCASMCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 153
           ++ LGGPGS PP C   CGKC PC AVHVP+ PG  +  EYYPEAWRCKCGNKL+MP
Sbjct: 51  QKRLGGPGSVPPMCRLKCGKCEPCKAVHVPIQPGLIMPLEYYPEAWRCKCGNKLFMP 107

[Close]

BLAST of Cp4.1LG02g11220 vs. TAIR 10
Match: AT3G13898.1 (unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10310.1). )

HSP 1 Score: 50.8 bits (120), Expect = 1.1e-06
Identity = 26/78 (33.33%), Postives = 38/78 (48.72%), Query Frame = 0


Query: 72  RVAQPATAEVVIGDHEDQELRTLARRELGGPGSSPPRCASMCGKCTPCTAVHVP----VP 131
           + A+  +   ++  +E++E     RR +   GS PP C   C  C PC A+  P    +P
Sbjct: 30  QAAEENSRRRILNPNENKEEIVKRRRRI---GSKPPSCEKKCYGCEPCEAIQFPTISSIP 89

Query: 132 PGTPVTAEYYPEAWRCKC 146
             +P  A Y PE WRC C
Sbjct: 90  HLSPHYANYQPEGWRCHC 104

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g11220 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1PEY6	1.1e-24	43.24	EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q2V3I3	1.7e-20	51.09	EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q9LUH9	1.9e-19	68.42	EPIDERMAL PATTERNING FACTOR-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q7M1E7	5.3e-06	44.90	Polygalacturonase OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1	[more]
Q9FY19	5.3e-06	44.90	Polygalacturonase OS=Juniperus ashei OX=13101 GN=JNA2 PE=1 SV=1	[more]

BLAST of Cp4.1LG02g11220 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023525345.1	1.50e-111	100.00	EPIDERMAL PATTERNING FACTOR-like protein 4 isoform X1 [Cucurbita pepo subsp. pep...	[more]
XP_023525346.1	1.84e-107	98.68	EPIDERMAL PATTERNING FACTOR-like protein 4 isoform X2 [Cucurbita pepo subsp. pep...	[more]
XP_022997734.1	1.14e-106	96.71	EPIDERMAL PATTERNING FACTOR-like protein 4 isoform X1 [Cucurbita maxima]	[more]
XP_022948421.1	5.83e-105	95.45	EPIDERMAL PATTERNING FACTOR-like protein 4 isoform X1 [Cucurbita moschata]	[more]
KAG6607365.1	8.29e-105	95.45	EPIDERMAL PATTERNING FACTOR-like protein 6, partial [Cucurbita argyrosperma subs...	[more]

BLAST of Cp4.1LG02g11220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KCE5	5.54e-107	96.71	Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A6J1G961	2.82e-105	95.45	Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1KAS0	6.78e-103	95.39	Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A6J1G964	3.46e-101	94.16	Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A0A0LXR9	7.67e-41	55.40	Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_1G533...	[more]

BLAST of Cp4.1LG02g11220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30370.1	3.6e-26	76.92	allergen-related	[more]
AT2G30370.2	8.1e-26	43.24	allergen-related	[more]
AT4G14723.1	1.2e-21	51.09	BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1);...	[more]
AT3G22820.1	1.3e-20	68.42	allergen-related	[more]
AT3G13898.1	1.1e-06	33.33	unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana prot...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF17181	EPF	coord: 102..152 e-value: 1.4E-19 score: 69.8
None	No IPR available	PANTHER	PTHR33109:SF4	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 6	coord: 30..152
IPR039455	EPIDERMAL PATTERNING FACTOR-like protein	PANTHER	PTHR33109	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4	coord: 30..152

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG02g11220.1	Cp4.1LG02g11220.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010052	guard cell differentiation
biological_process	GO:0010374	stomatal complex development
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane