Cp4.1LG02g10930 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATATTTTTGAAGAGAAGGAGAGGTTTGGAAGAGTGAATGAAAATGAGAAGAATGTTTGATGTGCGAAAACACATTTATTGAATAACCGATTCTTGAGGATTGGAGTGTTCTGGTTTTACTTCAGACGCCGACAGTGAGTTCATCCGTATTCAATCCCATCTTCCATCGTCTTTTTCTCCATATTTCGATTCTCCTCAAACCCCCTGTTCTCACCTCTTCCCATTGCCCGCATAAATCTCCTCTGCGCCTCTGGTTTTTGATACTCTGTTGTTGAATTCCAAGATTCAACGAATTTGGGTCAGATTTTGATTCGAGGGGGTCGTTGGTTTTCTCTCTTTCTCAGTGGGTTGGATTCCTTTTTTTACTGCTTTTGTTTGATTTCTTGCCCTTTTTGTGTTTTGGCTGCTTGTTTCTGTATTCAACTTGTTTATTGTAGTTTTCCCCTTTTTCGTTTTCAGTTCGTAGGTTGAGGAACTTTCTATTATTGGCTGCTATGGAAGGAGCTGTGGGTGCTGAGTTTCAGGATTGGGAGGTGCTGCTCCATGATTCGAACGCTGAAACTCCCCTGACTGCCGCTGAGTTTTCCGGGGAGAAACCGACCCGTTTCGGCGGAGCTGAGGATATGTCCGATTCCGATAGCATGATCAAATCCGATTATTTCTCTCTTGATAATCAGGGAAGGCGAGTGAAAACTATTCCTGAGCGTGATCTTAGCGAAGAGGAGGATTCGGTTAAATCCGATAATCCTAGTTGGATTGATCCGAGTTTGGAGAATCGGCATAGTGGGGTAATTTCGGGAGAGTTGTGGTCCGATTCTGGTAGTGATAGGTCTGATGATCGTAAATTTAGCGAATTCAATTTGAAAACTGAGTCTGGAATTGCAGAATTTCTGCTAGGCGATGAGGAAATGAGCGGTAAGAATCGAGAATTGGAGAGTTTAGAATCACATGTTGGATTAGCTTTTGAAGAATCTGAAGAATTCCAACCCCAAAGCAAGGATTGGAACAATTTCTTGTCTGATTCTGGTGGGAATATAGATCAAAGTGGCTTAAAAGTTGGGAAGTTGGAAGAAGAAGAAGGCAAAGAACATTTGGAGGAGAACAAGAATCTCCAAATTGAAGAAACAAAAGTGAATGCAGAATCTGGCAGTGAGGTTGGAGACCAAAGGAAAGTAGTTTGGTGGAAAGTCCCATTTGATGTCCTGAAGTATTGCATGTTTAAGGCAAGCCCTGTCTGGTCATTCTCATTAGCAGCTGCTGTAATGGGATTCATTATTCTTGGGAGGAAGCTCTACAAAATGAAGAGGAAGAGCCAGAGCTTGCACCTGAAGGTTATCCTGAATGAGAAGGTAAATTCACTAAGAATTTATACAGCAAACAAATTAGATGATGAACTGTTGATACTGAACTTTTGTCTTAGATTAACTAATTGCTTCACTGTGAAGAAATTCTGGAAGTTGTTGATTGTTGGGTTTATTGTGCTGCATATTTGTTGTCATTTTACTTGGTATATTAACAATTTGAGTGAAAATCCAGTATTTTTCTTTGTAGTGAAACACGAATCAAGTTTAATAGGCATGGCTCTAGTTTGTTGTTAGCTTATATGATTGGTGATCCAGTTTTTTAGGTCAGTAGGCTCGAGCTTGAGTTTGTTGTTAGCTTATGTGAGTGGTGATTCGGTTGTTTAGGTCAGTAGGCTCGAGCTTGAGTTTGTTGTTAGCTTATATGATTGGTGATCCGGCTGTTTAGGTCAGTAGGCTCAAGCTTGAGTTTGTTGTTAGCTTATGTGAGTGGTGATTCGGCTGTTTAGGTCAGCAGGCTCGAGCTTGAGTTTGTTGTTAGCTTATGTGAGTGGTGATTCGGTTGTTTAGGTCAGTAGGCTTGAGCTTGAGTTTGTTGTTAGCTTGTATGAGTGGTGATTCAGTTGCTTAGGTCGGTTGGCTCGAGCTTGAGCTTGTTGTTAGCTTATGTGAGTGATGATTCGGTTGTTTAGGCCAGTAGGCTCGATAGGCTCGGTGCTGGGGCAGTTCAGCTCCTTCTCATTGATGTGCCAAAATGTGAACCAAGTTTAGTACTGCTGCTGTTAGTTGGCTTGCTGTGAACACTTTCTTGTTCGACATTTATAGTTAGGGCATTTATTGCTTGGTTTTCCTTTCGGGAACTTTCCCATTTATTCAAGTTTAGCATTCAATTAGATGAAAACGACACCTTGAGAAACTCGGGTAGGAGCTAGTCTGCTTTATGTGGCTGATATTCTGCAACATAGGCAGCAATTCCCCCTCCCCCTTTTCAAATACTCTATTGAGATGTCGATTTTCGGCATCATTTCAAAGTTGGGATTATATTTTTTGACACCCTATGAACTAATTATTACCTGCAGAAGGGATCTCCACTCAAGAGTCGAGCTGCTCGTCTTAACGAAGCCTTTTCGATTGTGAGGCGTGTCCCAGTTGTTCGACCTGCTCTCCCTGGTGCCGGGATAAATCCATGGCCTGCAATGAGCATGAGTTGAGGATTCTTCCCACACGAGATGCGAATAAAGTAAAAGTGATGGTGTTTCTCTGTCCCTCTCTTTATCTAAAAGATGTAATATTCCACAGGTTTCTATCTATGTTATGCACCAATACAAGATGCTTTCAGCATCAGCTGTCTGTAAAGTGAATTCAGATACTGACTTCTCTTTTCTTTTTTTCTTTCCCTTTGAGATATTCCATTTTGTGTTTATATTGATGAATGCATAGCTCGGCAAGTAGTCTCATTATCGGGATCAAGTTTCACGCATAATATGTAACTGTTGGGGCCTAATCATAGTTGT ATATTTTTGAAGAGAAGGAGAGGTTTGGAAGAGTGAATGAAAATGAGAAGAATGTTTGATGTGCGAAAACACATTTATTGAATAACCGATTCTTGAGGATTGGAGTGTTCTGGTTTTACTTCAGACGCCGACAGTGAGTTCATCCGTATTCAATCCCATCTTCCATCGTCTTTTTCTCCATATTTCGATTCTCCTCAAACCCCCTGTTCTCACCTCTTCCCATTGCCCGCATAAATCTCCTCTGCGCCTCTGGTTTTTGATACTCTGTTGTTGAATTCCAAGATTCAACGAATTTGGGTCAGATTTTGATTCGAGGGGGTCGTTGGTTTTCTCTCTTTCTCAGTGGTTCGTAGGTTGAGGAACTTTCTATTATTGGCTGCTATGGAAGGAGCTGTGGGTGCTGAGTTTCAGGATTGGGAGGTGCTGCTCCATGATTCGAACGCTGAAACTCCCCTGACTGCCGCTGAGTTTTCCGGGGAGAAACCGACCCGTTTCGGCGGAGCTGAGGATATGTCCGATTCCGATAGCATGATCAAATCCGATTATTTCTCTCTTGATAATCAGGGAAGGCGAGTGAAAACTATTCCTGAGCGTGATCTTAGCGAAGAGGAGGATTCGGTTAAATCCGATAATCCTAGTTGGATTGATCCGAGTTTGGAGAATCGGCATAGTGGGGTAATTTCGGGAGAGTTGTGGTCCGATTCTGGTAGTGATAGGTCTGATGATCGTAAATTTAGCGAATTCAATTTGAAAACTGAGTCTGGAATTGCAGAATTTCTGCTAGGCGATGAGGAAATGAGCGGTAAGAATCGAGAATTGGAGAGTTTAGAATCACATGTTGGATTAGCTTTTGAAGAATCTGAAGAATTCCAACCCCAAAGCAAGGATTGGAACAATTTCTTGTCTGATTCTGGTGGGAATATAGATCAAAGTGGCTTAAAAGTTGGGAAGTTGGAAGAAGAAGAAGGCAAAGAACATTTGGAGGAGAACAAGAATCTCCAAATTGAAGAAACAAAAGTGAATGCAGAATCTGGCAGTGAGGTTGGAGACCAAAGGAAAGTAGTTTGGTGGAAAGTCCCATTTGATGTCCTGAAGTATTGCATGTTTAAGGCAAGCCCTGTCTGGTCATTCTCATTAGCAGCTGCTGTAATGGGATTCATTATTCTTGGGAGGAAGCTCTACAAAATGAAGAGGAAGAGCCAGAGCTTGCACCTGAAGGTTATCCTGAATGAGAAGGTCAGTAGGCTCGAGCTTGAGTTTGTTGTTAGCTTATATGATTGGTCAGCAGGCTCGAGCTTGAGTTTGTTGTTAGCTTATTTGCTTAGGTCGGTTGGCTCGAGCTTGAGCTTGTTGTTAGCTTATAAGGGATCTCCACTCAAGAGTCGAGCTGCTCGTCTTAACGAAGCCTTTTCGATTGTGAGGCGTGTCCCAGTTGTTCGACCTGCTCTCCCTGGTGCCGGGATAAATCCATGGCCTGCAATGAGCATGAGTTGAGGATTCTTCCCACACGAGATGCGAATAAAGTAAAAGTGATGGTGTTTCTCTGTCCCTCTCTTTATCTAAAAGATGTAATATTCCACAGGTTTCTATCTATGTTATGCACCAATACAAGATGCTTTCAGCATCAGCTGTCTGTAAAGTGAATTCAGATACTGACTTCTCTTTTCTTTTTTTCTTTCCCTTTGAGATATTCCATTTTGTGTTTATATTGATGAATGCATAGCTCGGCAAGTAGTCTCATTATCGGGATCAAGTTTCACGCATAATATGTAACTGTTGGGGCCTAATCATAGTTGT ATGGAAGGAGCTGTGGGTGCTGAGTTTCAGGATTGGGAGGTGCTGCTCCATGATTCGAACGCTGAAACTCCCCTGACTGCCGCTGAGTTTTCCGGGGAGAAACCGACCCGTTTCGGCGGAGCTGAGGATATGTCCGATTCCGATAGCATGATCAAATCCGATTATTTCTCTCTTGATAATCAGGGAAGGCGAGTGAAAACTATTCCTGAGCGTGATCTTAGCGAAGAGGAGGATTCGGTTAAATCCGATAATCCTAGTTGGATTGATCCGAGTTTGGAGAATCGGCATAGTGGGGTAATTTCGGGAGAGTTGTGGTCCGATTCTGGTAGTGATAGGTCTGATGATCGTAAATTTAGCGAATTCAATTTGAAAACTGAGTCTGGAATTGCAGAATTTCTGCTAGGCGATGAGGAAATGAGCGGTAAGAATCGAGAATTGGAGAGTTTAGAATCACATGTTGGATTAGCTTTTGAAGAATCTGAAGAATTCCAACCCCAAAGCAAGGATTGGAACAATTTCTTGTCTGATTCTGGTGGGAATATAGATCAAAGTGGCTTAAAAGTTGGGAAGTTGGAAGAAGAAGAAGGCAAAGAACATTTGGAGGAGAACAAGAATCTCCAAATTGAAGAAACAAAAGTGAATGCAGAATCTGGCAGTGAGGTTGGAGACCAAAGGAAAGTAGTTTGGTGGAAAGTCCCATTTGATGTCCTGAAGTATTGCATGTTTAAGGCAAGCCCTGTCTGGTCATTCTCATTAGCAGCTGCTGTAATGGGATTCATTATTCTTGGGAGGAAGCTCTACAAAATGAAGAGGAAGAGCCAGAGCTTGCACCTGAAGGTTATCCTGAATGAGAAGGTCAGTAGGCTCGAGCTTGAGTTTGTTGTTAGCTTATATGATTGGTCAGCAGGCTCGAGCTTGAGTTTGTTGTTAGCTTATTTGCTTAGGTCGGTTGGCTCGAGCTTGAGCTTGTTGTTAGCTTATAAGGGATCTCCACTCAAGAGTCGAGCTGCTCGTCTTAACGAAGCCTTTTCGATTGTGAGGCGTGTCCCAGTTGTTCGACCTGCTCTCCCTGGTGCCGGGATAAATCCATGGCCTGCAATGAGCATGAGTTGA MEGAVGAEFQDWEVLLHDSNAETPLTAAEFSGEKPTRFGGAEDMSDSDSMIKSDYFSLDNQGRRVKTIPERDLSEEEDSVKSDNPSWIDPSLENRHSGVISGELWSDSGSDRSDDRKFSEFNLKTESGIAEFLLGDEEMSGKNRELESLESHVGLAFEESEEFQPQSKDWNNFLSDSGGNIDQSGLKVGKLEEEEGKEHLEENKNLQIEETKVNAESGSEVGDQRKVVWWKVPFDVLKYCMFKASPVWSFSLAAAVMGFIILGRKLYKMKRKSQSLHLKVILNEKVSRLELEFVVSLYDWSAGSSLSLLLAYLLRSVGSSLSLLLAYKGSPLKSRAARLNEAFSIVRRVPVVRPALPGAGINPWPAMSMS Homology
BLAST of Cp4.1LG02g10930 vs. NCBI nr
Match: XP_023525474.1 (uncharacterized protein LOC111789066 [Cucurbita pepo subsp. pepo] >XP_023525475.1 uncharacterized protein LOC111789066 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 624 bits (1610), Expect = 2.55e-224 Identity = 328/370 (88.65%), Postives = 328/370 (88.65%), Query Frame = 0
BLAST of Cp4.1LG02g10930 vs. NCBI nr
Match: KAG7037168.1 (hypothetical protein SDJN02_00790, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 602 bits (1552), Expect = 1.75e-215 Identity = 319/370 (86.22%), Postives = 321/370 (86.76%), Query Frame = 0
BLAST of Cp4.1LG02g10930 vs. NCBI nr
Match: KAG6607526.1 (hypothetical protein SDJN03_00868, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 599 bits (1545), Expect = 2.04e-214 Identity = 318/370 (85.95%), Postives = 320/370 (86.49%), Query Frame = 0
BLAST of Cp4.1LG02g10930 vs. NCBI nr
Match: XP_022973393.1 (uncharacterized protein LOC111471945 isoform X1 [Cucurbita maxima] >XP_022973394.1 uncharacterized protein LOC111471945 isoform X1 [Cucurbita maxima]) HSP 1 Score: 595 bits (1533), Expect = 1.37e-212 Identity = 314/370 (84.86%), Postives = 320/370 (86.49%), Query Frame = 0
BLAST of Cp4.1LG02g10930 vs. NCBI nr
Match: XP_022932457.1 (uncharacterized protein LOC111438869 isoform X1 [Cucurbita moschata] >XP_022932459.1 uncharacterized protein LOC111438869 isoform X1 [Cucurbita moschata]) HSP 1 Score: 593 bits (1530), Expect = 3.93e-212 Identity = 314/370 (84.86%), Postives = 319/370 (86.22%), Query Frame = 0
BLAST of Cp4.1LG02g10930 vs. ExPASy TrEMBL
Match: A0A6J1ICX6 (uncharacterized protein LOC111471945 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471945 PE=4 SV=1) HSP 1 Score: 595 bits (1533), Expect = 6.64e-213 Identity = 314/370 (84.86%), Postives = 320/370 (86.49%), Query Frame = 0
BLAST of Cp4.1LG02g10930 vs. ExPASy TrEMBL
Match: A0A6J1EWR0 (uncharacterized protein LOC111438869 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111438869 PE=4 SV=1) HSP 1 Score: 593 bits (1530), Expect = 1.90e-212 Identity = 314/370 (84.86%), Postives = 319/370 (86.22%), Query Frame = 0
BLAST of Cp4.1LG02g10930 vs. ExPASy TrEMBL
Match: A0A6J1IB91 (uncharacterized protein LOC111471945 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111471945 PE=4 SV=1) HSP 1 Score: 561 bits (1445), Expect = 1.04e-199 Identity = 301/370 (81.35%), Postives = 307/370 (82.97%), Query Frame = 0
BLAST of Cp4.1LG02g10930 vs. ExPASy TrEMBL
Match: A0A6J1F294 (uncharacterized protein LOC111438869 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111438869 PE=4 SV=1) HSP 1 Score: 560 bits (1442), Expect = 2.98e-199 Identity = 301/370 (81.35%), Postives = 306/370 (82.70%), Query Frame = 0
BLAST of Cp4.1LG02g10930 vs. ExPASy TrEMBL
Match: A0A5D3BMQ1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00850 PE=4 SV=1) HSP 1 Score: 470 bits (1210), Expect = 1.29e-163 Identity = 257/380 (67.63%), Postives = 289/380 (76.05%), Query Frame = 0
BLAST of Cp4.1LG02g10930 vs. TAIR 10
Match: AT4G13530.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G10080.1); Has 70 Blast hits to 69 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 148.7 bits (374), Expect = 9.4e-36 Identity = 117/371 (31.54%), Postives = 181/371 (48.79%), Query Frame = 0
BLAST of Cp4.1LG02g10930 vs. TAIR 10
Match: AT4G13530.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G10080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 146.7 bits (369), Expect = 3.6e-35 Identity = 116/371 (31.27%), Postives = 180/371 (48.52%), Query Frame = 0
BLAST of Cp4.1LG02g10930 vs. TAIR 10
Match: AT4G10080.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G13530.1); Has 120 Blast hits to 114 proteins in 21 species: Archae - 2; Bacteria - 4; Metazoa - 0; Fungi - 12; Plants - 100; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 109.8 bits (273), Expect = 4.8e-24 Identity = 115/375 (30.67%), Postives = 166/375 (44.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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