Cp4.1LG02g10340 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGCATCAAAACCCCAACAATCAACTGCAACTTATGCATCAAGTGCTGAAAATATAGCCAAATTGCTTGAGAATTGGATGAAGAAATCACCAAAATCTTCCACACAAAGTGAAGGATCACAAAGTGGAATGAATTACAACAACTCACCGGAGGTGAATTTGGATGATTCCTTGTTTAATTTCAATGACAATAGCAATTCTCCTTCAACCTCTACAACAAATCAAGTTCCTCCTCTAAGTTTCCTGGAGAAGTGGCTGTTTGATGATGGAGCTTTGGCTCATGTTCATGCTGATCATATAATTAGTGTGTCATTAGAAGCTGAAACATGA ATGGAAGCATCAAAACCCCAACAATCAACTGCAACTTATGCATCAAGTGCTGAAAATATAGCCAAATTGCTTGAGAATTGGATGAAGAAATCACCAAAATCTTCCACACAAAGTGAAGGATCACAAAGTGGAATGAATTACAACAACTCACCGGAGGTGAATTTGGATGATTCCTTGTTTAATTTCAATGACAATAGCAATTCTCCTTCAACCTCTACAACAAATCAAGTTCCTCCTCTAAGTTTCCTGGAGAAGTGGCTGTTTGATGATGGAGCTTTGGCTCATGTTCATGCTGATCATATAATTAGTGTGTCATTAGAAGCTGAAACATGA ATGGAAGCATCAAAACCCCAACAATCAACTGCAACTTATGCATCAAGTGCTGAAAATATAGCCAAATTGCTTGAGAATTGGATGAAGAAATCACCAAAATCTTCCACACAAAGTGAAGGATCACAAAGTGGAATGAATTACAACAACTCACCGGAGGTGAATTTGGATGATTCCTTGTTTAATTTCAATGACAATAGCAATTCTCCTTCAACCTCTACAACAAATCAAGTTCCTCCTCTAAGTTTCCTGGAGAAGTGGCTGTTTGATGATGGAGCTTTGGCTCATGTTCATGCTGATCATATAATTAGTGTGTCATTAGAAGCTGAAACATGA MEASKPQQSTATYASSAENIAKLLENWMKKSPKSSTQSEGSQSGMNYNNSPEVNLDDSLFNFNDNSNSPSTSTTNQVPPLSFLEKWLFDDGALAHVHADHIISVSLEAET Homology
BLAST of Cp4.1LG02g10340 vs. ExPASy Swiss-Prot
Match: P81392 (Myb-related protein 306 OS=Antirrhinum majus OX=4151 GN=MYB306 PE=2 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 1.6e-04 Identity = 44/126 (34.92%), Postives = 59/126 (46.83%), Query Frame = 0
BLAST of Cp4.1LG02g10340 vs. ExPASy Swiss-Prot
Match: Q8GYP5 (Transcription factor MYB60 OS=Arabidopsis thaliana OX=3702 GN=MYB60 PE=1 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 4.7e-04 Identity = 38/118 (32.20%), Postives = 51/118 (43.22%), Query Frame = 0
BLAST of Cp4.1LG02g10340 vs. NCBI nr
Match: XP_023523569.1 (myb-related protein 306-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 214 bits (544), Expect = 1.96e-67 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0
BLAST of Cp4.1LG02g10340 vs. NCBI nr
Match: XP_022948406.1 (myb-related protein 306-like [Cucurbita moschata]) HSP 1 Score: 209 bits (533), Expect = 9.10e-66 Identity = 108/110 (98.18%), Postives = 108/110 (98.18%), Query Frame = 0
BLAST of Cp4.1LG02g10340 vs. NCBI nr
Match: KAG6607445.1 (Myb-related protein 306, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 209 bits (533), Expect = 9.10e-66 Identity = 108/110 (98.18%), Postives = 108/110 (98.18%), Query Frame = 0
BLAST of Cp4.1LG02g10340 vs. NCBI nr
Match: XP_022998743.1 (myb-related protein 306-like [Cucurbita maxima]) HSP 1 Score: 208 bits (530), Expect = 2.67e-65 Identity = 107/110 (97.27%), Postives = 108/110 (98.18%), Query Frame = 0
BLAST of Cp4.1LG02g10340 vs. NCBI nr
Match: KAG7037102.1 (Myb-related protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 203 bits (517), Expect = 2.42e-63 Identity = 105/110 (95.45%), Postives = 107/110 (97.27%), Query Frame = 0
BLAST of Cp4.1LG02g10340 vs. ExPASy TrEMBL
Match: A0A6J1G947 (myb-related protein 306-like OS=Cucurbita moschata OX=3662 GN=LOC111452096 PE=4 SV=1) HSP 1 Score: 209 bits (533), Expect = 4.41e-66 Identity = 108/110 (98.18%), Postives = 108/110 (98.18%), Query Frame = 0
BLAST of Cp4.1LG02g10340 vs. ExPASy TrEMBL
Match: A0A6J1KHM0 (myb-related protein 306-like OS=Cucurbita maxima OX=3661 GN=LOC111493316 PE=4 SV=1) HSP 1 Score: 208 bits (530), Expect = 1.29e-65 Identity = 107/110 (97.27%), Postives = 108/110 (98.18%), Query Frame = 0
BLAST of Cp4.1LG02g10340 vs. ExPASy TrEMBL
Match: A0A6J1KGA2 (myb-related protein 306-like OS=Cucurbita maxima OX=3661 GN=LOC111495505 PE=4 SV=1) HSP 1 Score: 116 bits (290), Expect = 3.77e-29 Identity = 72/116 (62.07%), Postives = 84/116 (72.41%), Query Frame = 0
BLAST of Cp4.1LG02g10340 vs. ExPASy TrEMBL
Match: A0A6J1E827 (myb-related protein 306-like OS=Cucurbita moschata OX=3662 GN=LOC111431592 PE=4 SV=1) HSP 1 Score: 112 bits (279), Expect = 1.58e-27 Identity = 70/112 (62.50%), Postives = 81/112 (72.32%), Query Frame = 0
BLAST of Cp4.1LG02g10340 vs. ExPASy TrEMBL
Match: A0A6J1C982 (myb-related protein 306-like OS=Momordica charantia OX=3673 GN=LOC111008619 PE=4 SV=1) HSP 1 Score: 103 bits (258), Expect = 1.61e-24 Identity = 72/112 (64.29%), Postives = 78/112 (69.64%), Query Frame = 0
BLAST of Cp4.1LG02g10340 vs. TAIR 10
Match: AT1G74650.1 (myb domain protein 31 ) HSP 1 Score: 51.6 bits (122), Expect = 4.7e-07 Identity = 50/139 (35.97%), Postives = 67/139 (48.20%), Query Frame = 0
BLAST of Cp4.1LG02g10340 vs. TAIR 10
Match: AT1G08810.2 (myb domain protein 60 ) HSP 1 Score: 45.4 bits (106), Expect = 3.3e-05 Identity = 38/118 (32.20%), Postives = 51/118 (43.22%), Query Frame = 0
BLAST of Cp4.1LG02g10340 vs. TAIR 10
Match: AT1G08810.1 (myb domain protein 60 ) HSP 1 Score: 45.4 bits (106), Expect = 3.3e-05 Identity = 38/118 (32.20%), Postives = 51/118 (43.22%), Query Frame = 0
BLAST of Cp4.1LG02g10340 vs. TAIR 10
Match: AT3G47600.1 (myb domain protein 94 ) HSP 1 Score: 41.6 bits (96), Expect = 4.8e-04 Identity = 40/117 (34.19%), Postives = 59/117 (50.43%), Query Frame = 0
BLAST of Cp4.1LG02g10340 vs. TAIR 10
Match: AT3G28910.1 (myb domain protein 30 ) HSP 1 Score: 40.8 bits (94), Expect = 8.2e-04 Identity = 18/35 (51.43%), Postives = 27/35 (77.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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