Cp4.1LG02g10130 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG02g10130
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionUnknown protein
LocationCp4.1LG02: 9948834 .. 9952573 (+)
RNA-Seq ExpressionCp4.1LG02g10130
SyntenyCp4.1LG02g10130
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGTGAATTGGAGGCTGGGAATTTCTCTCAGGCCGAGCCAATTTTCCTGTAGTTAAAATTGTTCCGCCTTTTACCGAGTGGCAATGTTGATAACCACGTCTCCAGTCTGCTTTTCTTTCTGCGATTCGGTATGAAAATTTTGTTCACAATGATGCATTATATATGATGCTATGCTTCAATTTATATGCCCCGTCTTATACTAAATTTGGTTACCATGGTTGAATTTCTGCCAATAAGCGCTGAAAATTATAGCTCGTTCAATTTTAAGTCGCCTAAGTTCTTTCCAAACGCTTCATGTTGTTGATAATTTGACCTGTATCTCTCTAGTCTACGGATATATCTGCACTTGAAATTTCTTGTTCCTCGACTTCACTGAAGCAGCTGCATTCAGAAAATTACACACAACTTCTTTGAAAAATTTCAGGTCTATCATGAGATTCGCACAGGGGAACCATTCTGGTGACCTTAAAGGTGCAAATGAAGCTCTAGGTGAGAAGTATTTTGGTTAATCATCATGTGCATTACATTCCATCTCAAAAGATAGACGTTAGTTTTGAGAAAATAACTAGGTTGCCACACTAAAATGAGTCTGGATTGTGAATTTAGTTATTATTGAAGGAGAAAAGTGTAGAGCCCAGGTTGTGATATCTCAATTTATTGACAAGATTTACGATATACAGAATTCTAATTTCTTCCATTTCAAATGATTTTAAGAAGATCTGTGTAGTGCCAAGCTCTAGATGTCAAGAGCAAGAGAAAATTCGGAGGATAACAGGAAAACTTTGGACATGACCTTCAATTATAATTGTAAATTCAGGGATCAACTTCTTTGTGATGCATGAACCTTTATGCCAAGGACCTCCTGGATGTAAGGGAAAAAAAAGTTAAAATTCTAAAGAGTGATGATTCTAAACTGTAATTTAGAGGTCTTTCGAACCTTCATTCAGCTAATAGAACATGCAACTTTGTTGATCATCACTACTTTTTGTCCTTTAATCGAGAAGATGTGAGAAAAGGGATTCGAACTCTAGTGTACACTATCGTATAGTTCCCAAGATGTGTTTCCTAATTTTCATTTTGCAGGCTTACATTCGTAAAGGTGACAGCATTCTTAACTATGGAGCATTTTGATTCAGCTGCGATGTCATATTCAACAGCTTTAAAATTTGATCCTTCAATTCGCCTTCAAAACCATTCAAGGTATTGATTCACTTATCTTGATATGAGAAGAATATGGGCAATTTCGTTACTGGGACAAAAGAGACAACCACTTAAAATTACTCCGTTACGGTTACAAGTCAATTGATAGCTTGTAAAACTTAACTGTCTGAAAATAGTCTCCCAAACAAGACTATTTGTTTTATGACTTTTTTTGAAACTGACCTCGAACCGAGCACAGTTTCTGAAGTGTCTGCCATCAGAATTTCTCACTGATCTCTTTCAATTATTCCCTTTCGAGTTCGTCATTTTAGGAAATGTGATTGAAGTCGGATTTTGTTAAGGGCTGCTAGAGTGCCTGTTTAATGTTATTCTCATATTTGCACATCATTTCTTCTATAGGTGCGAGTTGCTAAATTTCAGGAGAGACTCAGTGCCGTGCATACGCAACAAATTCTGAGAACAAAAATAATGACACAGTTCGAGATTCAGTCGTGCCTTCAGGTTGTTTCCAGGTTTCAAATTCCTGACTCATTGTCTTTCAAACCTTACTTTGGTTAAATGCCTAGAAATTTAATTCAATTTTGAAATTTCATTGAAATCTGAATGGGAATTTGTATAACTCTACATGAGAATGATTTTGATCCCAAGAAAAATAAACAGTTAAGTACATCAAATTGTAAATGTGTAAAAGAAATCAGAACTTCGTGAAGAAAAAGACAACTAAACATAATTCAGAATTTTTTTCCCAATGGATAATGCAGTGTTCTTGTGCCTAACTTCCTACCCATGTACCCTACCACGACGAACTTTGTGCTTCAAAAAGTTAAATTAGAAGTATGACAAGTCTCTGAACTTTGAATATAAGTTTCTAGATTTCAATGGTCTCTCTAATCAACATCGAATACGTCGAAGATCTAATTAGAACATCAAACAATTTGTACACCTTCCATTACTTGCCTTGATAACATTTGTTCTTTCATCAGACTAATGCCACTGAAATCTTCCCTTGCATTATTTGCCACTGGGATTGAACACTTCCCTAAATAGTACTGTAAACCAAAAGCATATACTGTTGTTCATTAACTTGCTGCTTTTCATTGTTTAGGGATTCCCTGTTTCATTATCTTACTGTCTCCCTCAAATTAGACCACAGCACAGCAAAAAGCAGATAAAAGTTGGTATCAGAAGGTGATGGAACTTAAGACTATTTCATACTGCTTTCTAGTACTAACATTTAGTGTCCAATGCCACAGTACCAACAAAAAACTTCCACTAAGTTATTTATAAGGGATTGGGTATTGCCAATCTTACTACTGCAGCTGCTACTAAATATCTAGTTAGGGATGGCTTTCCCAACCCAAGTAGTAGAGAGGCAAAAGGAATTATTACATAGGATTGGTGCTATGACCACATAAAAACATGTCCATGCTCTTCACCTTTGCCCACCATCTGTATGTCTTCCTCCCGCTGTTACTTTTTTTGTCACTGCCACTGTTGATGACACCAGAATGATGCCTCTTCGATTTAAGTTTTCTAATCTGAAAGCACGCCTCCAAGGTTACCTCATTCCCATTGTGTTCTTTGTTCTTACTCGTACTCTCTACCATTGTTTTATCTATCTTCACAAGCTTCTCATAGTACTCTCTATTCTTTTTCTCCAGCCCATGAATCTGTCCCTGTAGATCTTCTATTTTCTGGTTGAGTAGGTAAGCTCTATGATCATCCCGCAGCTTCAGCATACATCGTGCCATCTCACTCGCCTTCTGTTTCATGAACACAGACTCCGCTACCAGCCCTTTGTTTTCTTCCATCAAGGAAGACACCCTATATCCCAATCTTGCATTTTCATTCAGTAATATGAGCCTTTCAGACTCCAAAACCTCAAGCAAACTCTTCTGGAGCTCGACCTTCGTCGATGAATCACCACATTGCTTTTCCAGGATGCTTACCTCATTTATAAGAATGTCATACTCCACATTCTTGATGACAATCTCCGCAACAAAGGCGTCATTGTATACCATAGGATAGTTTTTAGCTGGTATTATAACAGATACTTGCTGGTAGGAGAGAGAGCTCTCTGCATCGGACTCGATTTGACTGATCCCTGAATCTTCGACTCCATCGAAAGAGTCGAGGGTTGAAGTAACAGAAGAGTGCCTGTTGTGATGATGGTTGTGACGTTTGGCAATGGTTTGAATGTAGCGATCGGATAAGGTGGTGTAAGCAGTGTACAGTTCTTGGAGAAGCGCCAGCAGTTGAGGGCGTTTGTTGTAGTAAAATTCTGCACGTTCGGCAAAACTATCTCCTGCGTTGTTCTCTCCAGCATTTTTCATAGCAAGTAAATTCATCTTCTGCTCCATATCTGCCATAGCACAACACGAGCAAGACAACTTACAAGCTATATCATGTAATTGGATCTTCTAACCACGATTGTTGGACCCAAAGTTAAACTCATTTGATAATATCATTTTTAATTTGATTTTTAATTTTGGTATTTGAACATTCTGCCTATTGTCATTTTTTTAATGATAGTTTACATGATCTGATCAAGGACCTGCATCAATTATCACCTATA

mRNA sequence

ATGAAAGTCTATCATGAGATTCGCACAGGGGAACCATTCTGGCTTACATTCGTAAAGGTGACAGCATTCTTAACTATGGAGCATTTTGATTCAGCTGCGATGTCATATTCAACAGCTTTAAAATTTGATCCTTCAATTCGCCTTCAAAACCATTCAAGGTGCGAGTTGCTAAATTTCAGGAGAGACTCAGTGCCGTGCATACGCAACAAATTCTGAGAACAAAAATAATGACACAGTTCGAGATTCAGTCGTGCCTTCAGGGATTCCCTGTTTCATTATCTTACTGTCTCCCTCAAATTAGACCACAGCACAGCAAAAAGCAGATAAAAGTTGGTATCAGAAGGTGATGGAACTTAAGACTATTTCATACTGCTTTCTAGTACTAACATTTAGTGTCCAATGCCACAGTACCAACAAAAAACTTCCACTAAGTTATTTATAAGGGATTGGGTATTGCCAATCTTACTACTGCAGCTGCTACTAAATATCTAGTTAGGGATGGCTTTCCCAACCCAAGTAGTAGAGAGGCAAAAGGAATTATTACATAGGATTGGTGCTATGACCACATAAAAACATGTCCATGCTCTTCACCTTTGCCCACCATCTGTATGTCTTCCTCCCGCTGTTACTTTTTTTGTCACTGCCACTGTTGATGACACCAGAATGATGCCTCTTCGATTTAAGTTTTCTAATCTGAAAGCACGCCTCCAAGGTTACCTCATTCCCATTGTGTTCTTTGTTCTTACTCGTACTCTCTACCATTGTTTTATCTATCTTCACAAGCTTCTCATAGTACTCTCTATTCTTTTTCTCCAGCCCATGAATCTGTCCCTGTAGATCTTCTATTTTCTGGTTGAGTAGGTAAGCTCTATGATCATCCCGCAGCTTCAGCATACATCGTGCCATCTCACTCGCCTTCTGTTTCATGAACACAGACTCCGCTACCAGCCCTTTGTTTTCTTCCATCAAGGAAGACACCCTATATCCCAATCTTGCATTTTCATTCAGTAATATGAGCCTTTCAGACTCCAAAACCTCAAGCAAACTCTTCTGGAGCTCGACCTTCGTCGATGAATCACCACATTGCTTTTCCAGGATGCTTACCTCATTTATAAGAATGTCATACTCCACATTCTTGATGACAATCTCCGCAACAAAGGCGTCATTGTATACCATAGGATAGTTTTTAGCTGGTATTATAACAGATACTTGCTGGTAGGAGAGAGAGCTCTCTGCATCGGACTCGATTTGACTGATCCCTGAATCTTCGACTCCATCGAAAGAGTCGAGGGTTGAAGTAACAGAAGAGTGCCTGTTGTGATGATGGTTGTGACGTTTGGCAATGGTTTGAATGTAGCGATCGGATAAGGTGGTGTAAGCAGTGTACAGTTCTTGGAGAAGCGCCAGCAGTTGAGGGCGTTTGTTGTAGTAAAATTCTGCACGTTCGGCAAAACTATCTCCTGCGTTGTTCTCTCCAGCATTTTTCATAGCAAGTAAATTCATCTTCTGCTCCATATCTGCCATAGCACAACACGAGCAAGACAACTTACAAGCTATATCATGTAATTGGATCTTCTAACCACGATTGTTGGACCCAAAGTTAAACTCATTTGATAATATCATTTTTAATTTGATTTTTAATTTTGGTATTTGAACATTCTGCCTATTGTCATTTTTTTAATGATAGTTTACATGATCTGATCAAGGACCTGCATCAATTATCACCTATA

Coding sequence (CDS)

ATGAAAGTCTATCATGAGATTCGCACAGGGGAACCATTCTGGCTTACATTCGTAAAGGTGACAGCATTCTTAACTATGGAGCATTTTGATTCAGCTGCGATGTCATATTCAACAGCTTTAAAATTTGATCCTTCAATTCGCCTTCAAAACCATTCAAGGTGCGAGTTGCTAAATTTCAGGAGAGACTCAGTGCCGTGCATACGCAACAAATTCTGA

Protein sequence

MKVYHEIRTGEPFWLTFVKVTAFLTMEHFDSAAMSYSTALKFDPSIRLQNHSRCELLNFRRDSVPCIRNKF
Homology
[Close]
BLAST of Cp4.1LG02g10130 vs. NCBI nr
Match: XP_022948525.1 (uncharacterized protein LOC111452178 isoform X1 [Cucurbita moschata])

HSP 1 Score: 95.9 bits (237), Expect = 9.51e-23
Identity = 45/50 (90.00%), Postives = 46/50 (92.00%), Query Frame = 0 

Query: 22  AFLTMEHFDSAAMSYSTALKFDPSIRLQNHSRCELLNFRRDSVPCIRNKF 71
           AFLT +HFDSAA  YSTALKFDPSIRLQNHSRCELLNFRRDSVPCI NKF
Sbjct: 140 AFLTKDHFDSAATLYSTALKFDPSIRLQNHSRCELLNFRRDSVPCIHNKF 189

[Close]
BLAST of Cp4.1LG02g10130 vs. NCBI nr
Match: KAG7037078.1 (hypothetical protein SDJN02_00699, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 95.9 bits (237), Expect = 2.75e-22
Identity = 45/50 (90.00%), Postives = 46/50 (92.00%), Query Frame = 0 

Query: 22  AFLTMEHFDSAAMSYSTALKFDPSIRLQNHSRCELLNFRRDSVPCIRNKF 71
           AFLT +HFDSAA  YSTALKFDPSIRLQNHSRCELLNFRRDSVPCI NKF
Sbjct: 188 AFLTKDHFDSAATLYSTALKFDPSIRLQNHSRCELLNFRRDSVPCIHNKF 237

[Close]
BLAST of Cp4.1LG02g10130 vs. NCBI nr
Match: XP_022948526.1 (uncharacterized protein LOC111452178 isoform X2 [Cucurbita moschata])

HSP 1 Score: 73.9 bits (180), Expect = 2.83e-14
Identity = 38/50 (76.00%), Postives = 39/50 (78.00%), Query Frame = 0 

Query: 22  AFLTMEHFDSAAMSYSTALKFDPSIRLQNHSRCELLNFRRDSVPCIRNKF 71
           AFLT +HFDSAA  YSTALKFDPSIRLQNHSR       RDSVPCI NKF
Sbjct: 140 AFLTKDHFDSAATLYSTALKFDPSIRLQNHSR-------RDSVPCIHNKF 182

[Close]
BLAST of Cp4.1LG02g10130 vs. ExPASy TrEMBL
Match: A0A6J1GA38 (uncharacterized protein LOC111452178 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452178 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 4.61e-23
Identity = 45/50 (90.00%), Postives = 46/50 (92.00%), Query Frame = 0 

Query: 22  AFLTMEHFDSAAMSYSTALKFDPSIRLQNHSRCELLNFRRDSVPCIRNKF 71
           AFLT +HFDSAA  YSTALKFDPSIRLQNHSRCELLNFRRDSVPCI NKF
Sbjct: 140 AFLTKDHFDSAATLYSTALKFDPSIRLQNHSRCELLNFRRDSVPCIHNKF 189

[Close]
BLAST of Cp4.1LG02g10130 vs. ExPASy TrEMBL
Match: A0A6J1G9F6 (uncharacterized protein LOC111452178 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111452178 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.37e-14
Identity = 38/50 (76.00%), Postives = 39/50 (78.00%), Query Frame = 0 

Query: 22  AFLTMEHFDSAAMSYSTALKFDPSIRLQNHSRCELLNFRRDSVPCIRNKF 71
           AFLT +HFDSAA  YSTALKFDPSIRLQNHSR       RDSVPCI NKF
Sbjct: 140 AFLTKDHFDSAATLYSTALKFDPSIRLQNHSR-------RDSVPCIHNKF 182

The following BLAST results are available for this feature:
BLAST of Cp4.1LG02g10130 vs.
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG02g10130 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022948525.19.51e-2390.00uncharacterized protein LOC111452178 isoform X1 [Cucurbita moschata][more]
KAG7037078.12.75e-2290.00hypothetical protein SDJN02_00699, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_022948526.12.83e-1476.00uncharacterized protein LOC111452178 isoform X2 [Cucurbita moschata][more]
BLAST of Cp4.1LG02g10130 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GA384.61e-2390.00uncharacterized protein LOC111452178 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1G9F61.37e-1476.00uncharacterized protein LOC111452178 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
BLAST of Cp4.1LG02g10130 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG02g10130.1Cp4.1LG02g10130.1mRNA