Cp4.1LG02g09980 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG02g09980
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	CASP-like protein
Location	Cp4.1LG02: 10044201 .. 10046010 (+)
RNA-Seq Expression	Cp4.1LG02g09980
Synteny	Cp4.1LG02g09980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCGTATGGTGGTAGCGTTCATCGGGATTGGACTTCGAATCTTCGCCTTCATATGTCTCTTCATCGCCTTGGTCGTAATTGCCACCGACAAACTGGTCCTCATTGATGGCTCTGAATCAACCTTCAATGACATTCAAGGATACAGGTTCTCTGTTCGGCCTATTTCTAATATCCATTCTAATTCATGACCTAAAATTTCTTCTTCATGCAGGTACGTCTAATTCATGACCTAAAATTTCTTCTTCATGCAGGTACGTTTTGTCCGTGGCAATCATAGGGTTGGTCCATACAATACTACAACTGGGTTTCTCTATATACTATGCGGTTACCAAAAACATACCATTTTGGAACGGACTCCCTCAATTCAATTACTACACTGACCAGGTTTGTGTGATCACCACTTTACTATCTTCTTCGTTGATTTCCTTAACGAAAATTATCGAGAATATTGTTCTTTCAAACTTAACCTCAGCATCATGGTGTTTCAAGTCATCATCACATTAATTTTTTGTCCAACGAATTTTTATCCAAAGTTAATCTTGAAAGCGTTTTTCAAAGATAAAATATCATTAATTTTGAAAGAATAAGGATAATTTTTAAACAAGAGGACGCCAGGTGTCACAATCGCACTCTTGATGGCAGCGGACTTGCGATTGTGCGACACTCACTTTCCAACAACAAGTGAGTTAAGCCAATTCATTCTTTCATCGTCTACGGCCAAGCGATGTATGCTCGAGACTCTGGCCTCGGTTTAAGAAGAAGGTTTTAGAGAGCGAGGGTAGAGAGATTTTCAAAATAGAGATTTTGAAAGAGACGTTATATATGCAAGCAAAAGAGTAACAACAACAACTCACAGTATATAACTATTGGTAGGGAGACGTCGACAACTAGTCATATCTCCTATAGTACATTTTGAGGCATTTCATGTCTAGCAAGCCTAGAAATACGTCCTACTTCCTGGAAATACGTCCTACTTCCTGGAAATACGTCCTACTTCCTGGAAATACGTCCTACTTCCTGGAAATACGTCCTACTTCCTAGAAATACGTCGGGGGGTTTGGCTTATGATGGGCATGCGGCATGGGCAACATGCCTTAGACGAGCATAACCGTGGCATCGGACTCCAAGGGGTGGATTGTGGAATCCCACCTCGTTGGAGAGGGAAACGAAACATTTCCTATAAGTGTGAAAATCTCTAACTAGTACATGCGTTTTAAAACTATAAAGCTGGCGACGATATGTACCCAGCAATGTCTACTTAGGATCATTTATTTTAAAACCGAGAAACCAAATAGAAATAACTTAACCTAATTTGTTGAAATCTCGCTGATATCCAAATGGGAAAGGCAGGTGATAAGTTGGGTGTTGGTATCGGCGGCGGGGGCGGGCCTTGCGGTGTCGGCGGATCGTAAAATGTTACTGAATCAAGTTGTCGAGAACGGCATCGGCGATTGCGGAGTGTTGTTTGCAGCATTGGATCAGCAGAAGTGGTTGGTTGACGATTTCTTCGATAGGGCCAATATCGCCTCTGCCATTCTCTTCCTTGCTTTCCTCTCCATCGCCACTATCCTCCTCCTCTCACCATTCAATCGGCTCAAACCTATTCCCACCACCCAAGATCTTGAGGCCCATTCTCCCCAGGCCCAAAAGTGCAAGGCCCAATCTCCACAGGCCCACACAGTCGAGGCCCAATCCCCACAGGCCCATACAGTCGAGGCCCAATCTCCACGGGCTCAACAGGTTGATGCCCAATCTCCACAGGCCCAAAAGGTCGAGGCCCAACCTACGGAGACCTCTTCCACTTGA

mRNA sequence

ATGGATCGTATGGTGGTAGCGTTCATCGGGATTGGACTTCGAATCTTCGCCTTCATATGTCTCTTCATCGCCTTGGTCGTAATTGCCACCGACAAACTGGTCCTCATTGATGGCTCTGAATCAACCTTCAATGACATTCAAGGATACAGGTACGTTTTGTCCGTGGCAATCATAGGGTTGGTCCATACAATACTACAACTGGGTTTCTCTATATACTATGCGGTTACCAAAAACATACCATTTTGGAACGGACTCCCTCAATTCAATTACTACACTGACCAGGTGATAAGTTGGGTGTTGGTATCGGCGGCGGGGGCGGGCCTTGCGGTGTCGGCGGATCGTAAAATGTTACTGAATCAAGTTGTCGAGAACGGCATCGGCGATTGCGGAGTGTTGTTTGCAGCATTGGATCAGCAGAAGTGGTTGGTTGACGATTTCTTCGATAGGGCCAATATCGCCTCTGCCATTCTCTTCCTTGCTTTCCTCTCCATCGCCACTATCCTCCTCCTCTCACCATTCAATCGGCTCAAACCTATTCCCACCACCCAAGATCTTGAGGCCCATTCTCCCCAGGCCCAAAAGTGCAAGGCCCAATCTCCACAGGCCCACACAGTCGAGGCCCAATCCCCACAGGCCCATACAGTCGAGGCCCAATCTCCACGGGCTCAACAGGTTGATGCCCAATCTCCACAGGCCCAAAAGGTCGAGGCCCAACCTACGGAGACCTCTTCCACTTGA

Coding sequence (CDS)

ATGGATCGTATGGTGGTAGCGTTCATCGGGATTGGACTTCGAATCTTCGCCTTCATATGTCTCTTCATCGCCTTGGTCGTAATTGCCACCGACAAACTGGTCCTCATTGATGGCTCTGAATCAACCTTCAATGACATTCAAGGATACAGGTACGTTTTGTCCGTGGCAATCATAGGGTTGGTCCATACAATACTACAACTGGGTTTCTCTATATACTATGCGGTTACCAAAAACATACCATTTTGGAACGGACTCCCTCAATTCAATTACTACACTGACCAGGTGATAAGTTGGGTGTTGGTATCGGCGGCGGGGGCGGGCCTTGCGGTGTCGGCGGATCGTAAAATGTTACTGAATCAAGTTGTCGAGAACGGCATCGGCGATTGCGGAGTGTTGTTTGCAGCATTGGATCAGCAGAAGTGGTTGGTTGACGATTTCTTCGATAGGGCCAATATCGCCTCTGCCATTCTCTTCCTTGCTTTCCTCTCCATCGCCACTATCCTCCTCCTCTCACCATTCAATCGGCTCAAACCTATTCCCACCACCCAAGATCTTGAGGCCCATTCTCCCCAGGCCCAAAAGTGCAAGGCCCAATCTCCACAGGCCCACACAGTCGAGGCCCAATCCCCACAGGCCCATACAGTCGAGGCCCAATCTCCACGGGCTCAACAGGTTGATGCCCAATCTCCACAGGCCCAAAAGGTCGAGGCCCAACCTACGGAGACCTCTTCCACTTGA

Protein sequence

MDRMVVAFIGIGLRIFAFICLFIALVVIATDKLVLIDGSESTFNDIQGYRYVLSVAIIGLVHTILQLGFSIYYAVTKNIPFWNGLPQFNYYTDQVISWVLVSAAGAGLAVSADRKMLLNQVVENGIGDCGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNRLKPIPTTQDLEAHSPQAQKCKAQSPQAHTVEAQSPQAHTVEAQSPRAQQVDAQSPQAQKVEAQPTETSST

Homology

[Close]

BLAST of Cp4.1LG02g09980 vs. ExPASy Swiss-Prot
Match: Q8GWD5 (CASP-like protein 4D1 OS=Arabidopsis thaliana OX=3702 GN=At2g39530 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 7.2e-13
Identity = 59/175 (33.71%), Postives = 94/175 (53.71%), Query Frame = 0


Query: 13  LRIFAFICLFIALVVIATDKLVLIDGSES---TFNDIQGYRYVLSVAIIGLVHTILQLGF 72
           LR+     L I +V+I+T+ + L   S S    FND+  YRY+LS A+IGLV+ ++QL  
Sbjct: 20  LRVLTAAFLLITVVLISTNTVTLEISSTSIKLPFNDVYAYRYMLSAAVIGLVYAVVQLFL 79

Query: 73  SI-YYAVTKNIPFWNGLPQFNYYTDQVISWVLVSAAGAGLAVSADRKMLLNQVVENGIGD 132
           +I  +A  K  P      QF++Y D+VIS++L + + AG  VS D K     ++E     
Sbjct: 80  TISQFATGKTHPL---TYQFDFYGDKVISYLLATGSAAGFGVSKDLKDTYIALIE----- 139

Query: 133 CGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNRLK-PIPTT 183
               F + D     VD FF +   ++++L  AF+S+A + + S     K P+P +
Sbjct: 140 ----FDSTDP----VDKFFSKGYASASLLLFAFVSLAVLSVFSSLALSKRPVPVS 178

[Close]

BLAST of Cp4.1LG02g09980 vs. ExPASy Swiss-Prot
Match: D7LD60 (CASP-like protein 4D1 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_903205 PE=3 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.6e-12
Identity = 54/162 (33.33%), Postives = 87/162 (53.70%), Query Frame = 0


Query: 13  LRIFAFICLFIALVVIATDKLVLIDGSES---TFNDIQGYRYVLSVAIIGLVHTILQLGF 72
           LR+     L I +V+I+T+ + L   S S    FND+  YRY+LS A+IGL++ ++QL  
Sbjct: 20  LRVLTAAFLVITVVLISTNTVTLEVSSTSIKMRFNDVYAYRYMLSAAVIGLLYAVVQLFL 79

Query: 73  SIYYAVTKNIPFWNGLPQFNYYTDQVISWVLVSAAGAGLAVSADRKMLLNQVVENGIGDC 132
           +I    T      N   QFN+Y D++IS++L + + AG  VS D K     ++E      
Sbjct: 80  TISQFATGTTHPLN--YQFNFYGDKIISYLLATGSAAGFGVSKDLKETFLALIE------ 139

Query: 133 GVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLS 172
              F + D     VD FF +   ++++L  AF+S+A + + S
Sbjct: 140 ---FDSTDP----VDKFFSKGYASASLLLFAFVSLAVLSVFS 166

[Close]

BLAST of Cp4.1LG02g09980 vs. ExPASy Swiss-Prot
Match: B9SXY8 (CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 4.7e-12
Identity = 53/165 (32.12%), Postives = 89/165 (53.94%), Query Frame = 0


Query: 13  LRIFAFICLFIALVVIATDKLVL-IDGSEST--FNDIQGYRYVLSVAIIGLVHTILQLGF 72
           LRI  FI L  +LV++ T+   L +D  E    F D+  YRY+L+  +IGL +T+LQ+ F
Sbjct: 17  LRILTFIFLIASLVILTTNTATLELDLVEVKVHFKDVYAYRYMLATIVIGLAYTVLQIAF 76

Query: 73  SIYYAVTKN-IPFWNGLPQFNYYTDQVISWVLVSAAGAGLAVSADRKMLLNQVVENGIGD 132
           ++YY  T N +   +G   F+++ D+VIS++LV+ A AG A + D K      V +G GD
Sbjct: 77  TLYYVATGNRMMSGDGNLAFDFFGDKVISYILVTGAAAGFASTKDIK-----PVFSGSGD 136

Query: 133 CGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPF 174
                          D F ++   ++++L + F+  A + + S +
Sbjct: 137 --------------FDAFINKGYASASLLLIGFVCTAVLSVFSSY 162

[Close]

BLAST of Cp4.1LG02g09980 vs. ExPASy Swiss-Prot
Match: Q56X75 (CASP-like protein 4D2 OS=Arabidopsis thaliana OX=3702 GN=At2g39518 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 6.1e-12
Identity = 51/169 (30.18%), Postives = 90/169 (53.25%), Query Frame = 0


Query: 13  LRIFAFICLFIALVVIATDKLVLIDGSEST---FNDIQGYRYVLSVAIIGLVHTILQLGF 72
           LR+   + L IAL++++T+ + ++    +    F D+  YRY+LS A+IGLV+ ++QL F
Sbjct: 20  LRVLTGVFLVIALIILSTNSVTIVSQGSALKFHFKDVYAYRYMLSAAVIGLVYAVIQLFF 79

Query: 73  SI-YYAVTKNIPFWNGLPQFNYYTDQVISWVLVSAAGAGLAVSADRKMLLNQVVENGIGD 132
           +I  +A     PF     Q ++Y D++IS+++ + + AG  V+ D K            D
Sbjct: 80  TISEFATGVKNPF---NYQLDFYGDKLISYLVATGSAAGFGVTKDLK------------D 139

Query: 133 CGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNRLK 178
             +   ALD     VD FF +   ++++L  AF+ +A + + S F   K
Sbjct: 140 TFLALVALDSTD-PVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAK 172

[Close]

BLAST of Cp4.1LG02g09980 vs. ExPASy Swiss-Prot
Match: D7LD59 (CASP-like protein 4D2 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_903204 PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.4e-11
Identity = 49/163 (30.06%), Postives = 88/163 (53.99%), Query Frame = 0


Query: 13  LRIFAFICLFIALVVIATDKLVLIDGSEST---FNDIQGYRYVLSVAIIGLVHTILQLGF 72
           LR+   + L IAL++++T+ + ++    +    F D+  YRY+LS A+IGL++ ++QL F
Sbjct: 20  LRVLTGVFLVIALIILSTNSVTIVSQGSALKFHFKDVYAYRYMLSAAVIGLLYAVIQLFF 79

Query: 73  SI-YYAVTKNIPFWNGLPQFNYYTDQVISWVLVSAAGAGLAVSADRKMLLNQVVENGIGD 132
           +I  +A     PF     Q ++Y D++IS+++ + + AG  VS D K            D
Sbjct: 80  TISEFATGMKNPF---NYQLDFYGDKLISYLVATGSAAGFGVSKDLK------------D 139

Query: 133 CGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLS 172
             +   ALD     VD FF R   ++++L  +F+ +A + + S
Sbjct: 140 AFIALVALDSTD-PVDKFFSRGYASASLLLFSFICLAVLSVFS 166

[Close]

BLAST of Cp4.1LG02g09980 vs. NCBI nr
Match: XP_023524544.1 (CASP-like protein 4D1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 455 bits (1170), Expect = 9.13e-161
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0


Query: 1   MDRMVVAFIGIGLRIFAFICLFIALVVIATDKLVLIDGSESTFNDIQGYRYVLSVAIIGL 60
           MDRMVVAFIGIGLRIFAFICLFIALVVIATDKLVLIDGSESTFNDIQGYRYVLSVAIIGL
Sbjct: 1   MDRMVVAFIGIGLRIFAFICLFIALVVIATDKLVLIDGSESTFNDIQGYRYVLSVAIIGL 60

Query: 61  VHTILQLGFSIYYAVTKNIPFWNGLPQFNYYTDQVISWVLVSAAGAGLAVSADRKMLLNQ 120
           VHTILQLGFSIYYAVTKNIPFWNGLPQFNYYTDQVISWVLVSAAGAGLAVSADRKMLLNQ
Sbjct: 61  VHTILQLGFSIYYAVTKNIPFWNGLPQFNYYTDQVISWVLVSAAGAGLAVSADRKMLLNQ 120

Query: 121 VVENGIGDCGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNRLKPIP 180
           VVENGIGDCGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNRLKPIP
Sbjct: 121 VVENGIGDCGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNRLKPIP 180

Query: 181 TTQDLEAHSPQAQKCKAQSPQAHTVEAQSPQAHTVEAQSPRAQQVDAQSPQAQKVEAQPT 240
           TTQDLEAHSPQAQKCKAQSPQAHTVEAQSPQAHTVEAQSPRAQQVDAQSPQAQKVEAQPT
Sbjct: 181 TTQDLEAHSPQAQKCKAQSPQAHTVEAQSPQAHTVEAQSPRAQQVDAQSPQAQKVEAQPT 240

Query: 241 ETSST 245
           ETSST
Sbjct: 241 ETSST 245

[Close]

BLAST of Cp4.1LG02g09980 vs. NCBI nr
Match: KAG7037064.1 (CASP-like protein 4D1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 441 bits (1134), Expect = 2.80e-155
Identity = 239/245 (97.55%), Postives = 239/245 (97.55%), Query Frame = 0


Query: 1   MDRMVVAFIGIGLRIFAFICLFIALVVIATDKLVLIDGSESTFNDIQGYRYVLSVAIIGL 60
           MD MVVAFIGIGLRIFAFICLFIALVVIATDKLVLIDGSESTFNDIQGYRYVLSVAIIGL
Sbjct: 1   MDHMVVAFIGIGLRIFAFICLFIALVVIATDKLVLIDGSESTFNDIQGYRYVLSVAIIGL 60

Query: 61  VHTILQLGFSIYYAVTKNIPFWNGLPQFNYYTDQVISWVLVSAAGAGLAVSADRKMLLNQ 120
           VHTILQLGFSIYYAVTK IPFW GLPQFNYYTDQVISWVL SAAGAGLAVSADRKMLLNQ
Sbjct: 61  VHTILQLGFSIYYAVTKTIPFWKGLPQFNYYTDQVISWVLASAAGAGLAVSADRKMLLNQ 120

Query: 121 VVENGIGDCGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNRLKPIP 180
           VVENGIGDCGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNRLKPIP
Sbjct: 121 VVENGIGDCGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNRLKPIP 180

Query: 181 TTQDLEAHSPQAQKCKAQSPQAHTVEAQSPQAHTVEAQSPRAQQVDAQSPQAQKVEAQPT 240
           TTQDLEAHSPQAQK KAQSPQAHTVEAQSPQAHTVEAQSPRAQ VDAQSPQAQKVEAQPT
Sbjct: 181 TTQDLEAHSPQAQKSKAQSPQAHTVEAQSPQAHTVEAQSPRAQHVDAQSPQAQKVEAQPT 240

Query: 241 ETSST 245
           ETSST
Sbjct: 241 ETSST 245

[Close]

BLAST of Cp4.1LG02g09980 vs. NCBI nr
Match: XP_022949251.1 (CASP-like protein 4D1 [Cucurbita moschata])

HSP 1 Score: 415 bits (1066), Expect = 7.72e-145
Identity = 229/250 (91.60%), Postives = 234/250 (93.60%), Query Frame = 0


Query: 1   MDRMVVAFIGIGLRIFAFICLFIALVVIATDKLVLIDGSESTFNDIQGYRYVLSVAIIGL 60
           M RMVVAFIGIGLRIFAFICL IALVVIATDKLVLI+GSESTFNDIQGYRYVL+VAIIGL
Sbjct: 1   MGRMVVAFIGIGLRIFAFICLLIALVVIATDKLVLIEGSESTFNDIQGYRYVLAVAIIGL 60

Query: 61  VHTILQLGFSIYYAVTKNIPFWNGLPQFNYYTDQVISWVLVSAAGAGLAVSADRKMLLNQ 120
           VHTILQLGFSIYYAVTKNIPFW GLPQFNYYTDQVISWVL SAAGAGLAVSADRKMLLN+
Sbjct: 61  VHTILQLGFSIYYAVTKNIPFWKGLPQFNYYTDQVISWVLASAAGAGLAVSADRKMLLNE 120

Query: 121 VVENGIGDCGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNRLKPIP 180
           VVE GIGDCGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNR++PIP
Sbjct: 121 VVETGIGDCGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNRIEPIP 180

Query: 181 TTQDLEAHSPQAQKCKAQSPQAHTVEAQSPQAHTVEA-----QSPRAQQVDAQSPQAQKV 240
           TTQDLEA SPQAQ  KAQSPQA TVEAQSP AHTVEA     QSPRAQQVDA SPQAQKV
Sbjct: 181 TTQDLEAQSPQAQNGKAQSPQAQTVEAQSPHAHTVEAHSPQAQSPRAQQVDAHSPQAQKV 240

Query: 241 EAQPTETSST 245
           EAQPTETSST
Sbjct: 241 EAQPTETSST 250

[Close]

BLAST of Cp4.1LG02g09980 vs. NCBI nr
Match: KAG6607394.1 (CASP-like protein 4D1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 397 bits (1021), Expect = 2.26e-138
Identity = 220/245 (89.80%), Postives = 220/245 (89.80%), Query Frame = 0


Query: 1   MDRMVVAFIGIGLRIFAFICLFIALVVIATDKLVLIDGSESTFNDIQGYRYVLSVAIIGL 60
           MD MVVAFIGIGLRIFAFICLFIALVVIATDKLVLIDGSESTFNDIQGYRYVLSVAIIGL
Sbjct: 1   MDHMVVAFIGIGLRIFAFICLFIALVVIATDKLVLIDGSESTFNDIQGYRYVLSVAIIGL 60

Query: 61  VHTILQLGFSIYYAVTKNIPFWNGLPQFNYYTDQVISWVLVSAAGAGLAVSADRKMLLNQ 120
           VHTILQLGFSIYYAVTK IPFW GLPQFNYYTDQVISWVL SAAGAGLAVSADRKMLLNQ
Sbjct: 61  VHTILQLGFSIYYAVTKTIPFWKGLPQFNYYTDQVISWVLASAAGAGLAVSADRKMLLNQ 120

Query: 121 VVENGIGDCGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNRLKPIP 180
           VVENGIGDCGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNRLKPIP
Sbjct: 121 VVENGIGDCGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNRLKPIP 180

Query: 181 TTQDLEAHSPQAQKCKAQSPQAHTVEAQSPQAHTVEAQSPRAQQVDAQSPQAQKVEAQPT 240
           TTQDLEAHSPQAQK KAQSPQAHTVEAQSPQA                    QKVEAQPT
Sbjct: 181 TTQDLEAHSPQAQKSKAQSPQAHTVEAQSPQA--------------------QKVEAQPT 225

Query: 241 ETSST 245
           ETSST
Sbjct: 241 ETSST 225

[Close]

BLAST of Cp4.1LG02g09980 vs. NCBI nr
Match: XP_022998177.1 (CASP-like protein 4D1 [Cucurbita maxima])

HSP 1 Score: 373 bits (958), Expect = 8.95e-129
Identity = 198/218 (90.83%), Postives = 208/218 (95.41%), Query Frame = 0


Query: 1   MDRMVVAFIGIGLRIFAFICLFIALVVIATDKLVLIDGSESTFNDIQGYRYVLSVAIIGL 60
           MDRMVVAFIGIGLRIFAFICLFIALVVIATDKLVLIDGSESTFND+QGYRYVL+VAIIGL
Sbjct: 1   MDRMVVAFIGIGLRIFAFICLFIALVVIATDKLVLIDGSESTFNDVQGYRYVLAVAIIGL 60

Query: 61  VHTILQLGFSIYYAVTKNIPFWNGLPQFNYYTDQVISWVLVSAAGAGLAVSADRKMLLNQ 120
           VHTILQLGFSIYYAVT+ +PFW GLPQFNYY DQVI+WVL SAAGAGLAVSADRKMLLNQ
Sbjct: 61  VHTILQLGFSIYYAVTQIVPFWKGLPQFNYYADQVINWVLASAAGAGLAVSADRKMLLNQ 120

Query: 121 VVENGIGDCGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNRLKPIP 180
           VVEN IGDC VLFAALDQQKWLV+DFFDRANIASAILFLAFLSIAT+LLLSPFNR+KP+P
Sbjct: 121 VVENDIGDCVVLFAALDQQKWLVNDFFDRANIASAILFLAFLSIATLLLLSPFNRIKPMP 180

Query: 181 TTQDLEAHSPQAQKCKAQSPQAHTVEAQSPQAHTVEAQ 218
           TTQDLEAHSPQAQK +AQSPQA  VEAQSPQA TVEAQ
Sbjct: 181 TTQDLEAHSPQAQKIQAQSPQAQKVEAQSPQAQTVEAQ 218

[Close]

BLAST of Cp4.1LG02g09980 vs. ExPASy TrEMBL
Match: A0A6J1GBH8 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111452662 PE=3 SV=1)

HSP 1 Score: 415 bits (1066), Expect = 3.74e-145
Identity = 229/250 (91.60%), Postives = 234/250 (93.60%), Query Frame = 0


Query: 1   MDRMVVAFIGIGLRIFAFICLFIALVVIATDKLVLIDGSESTFNDIQGYRYVLSVAIIGL 60
           M RMVVAFIGIGLRIFAFICL IALVVIATDKLVLI+GSESTFNDIQGYRYVL+VAIIGL
Sbjct: 1   MGRMVVAFIGIGLRIFAFICLLIALVVIATDKLVLIEGSESTFNDIQGYRYVLAVAIIGL 60

Query: 61  VHTILQLGFSIYYAVTKNIPFWNGLPQFNYYTDQVISWVLVSAAGAGLAVSADRKMLLNQ 120
           VHTILQLGFSIYYAVTKNIPFW GLPQFNYYTDQVISWVL SAAGAGLAVSADRKMLLN+
Sbjct: 61  VHTILQLGFSIYYAVTKNIPFWKGLPQFNYYTDQVISWVLASAAGAGLAVSADRKMLLNE 120

Query: 121 VVENGIGDCGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNRLKPIP 180
           VVE GIGDCGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNR++PIP
Sbjct: 121 VVETGIGDCGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNRIEPIP 180

Query: 181 TTQDLEAHSPQAQKCKAQSPQAHTVEAQSPQAHTVEA-----QSPRAQQVDAQSPQAQKV 240
           TTQDLEA SPQAQ  KAQSPQA TVEAQSP AHTVEA     QSPRAQQVDA SPQAQKV
Sbjct: 181 TTQDLEAQSPQAQNGKAQSPQAQTVEAQSPHAHTVEAHSPQAQSPRAQQVDAHSPQAQKV 240

Query: 241 EAQPTETSST 245
           EAQPTETSST
Sbjct: 241 EAQPTETSST 250

[Close]

BLAST of Cp4.1LG02g09980 vs. ExPASy TrEMBL
Match: A0A6J1K769 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111492902 PE=3 SV=1)

HSP 1 Score: 373 bits (958), Expect = 4.34e-129
Identity = 198/218 (90.83%), Postives = 208/218 (95.41%), Query Frame = 0


Query: 1   MDRMVVAFIGIGLRIFAFICLFIALVVIATDKLVLIDGSESTFNDIQGYRYVLSVAIIGL 60
           MDRMVVAFIGIGLRIFAFICLFIALVVIATDKLVLIDGSESTFND+QGYRYVL+VAIIGL
Sbjct: 1   MDRMVVAFIGIGLRIFAFICLFIALVVIATDKLVLIDGSESTFNDVQGYRYVLAVAIIGL 60

Query: 61  VHTILQLGFSIYYAVTKNIPFWNGLPQFNYYTDQVISWVLVSAAGAGLAVSADRKMLLNQ 120
           VHTILQLGFSIYYAVT+ +PFW GLPQFNYY DQVI+WVL SAAGAGLAVSADRKMLLNQ
Sbjct: 61  VHTILQLGFSIYYAVTQIVPFWKGLPQFNYYADQVINWVLASAAGAGLAVSADRKMLLNQ 120

Query: 121 VVENGIGDCGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNRLKPIP 180
           VVEN IGDC VLFAALDQQKWLV+DFFDRANIASAILFLAFLSIAT+LLLSPFNR+KP+P
Sbjct: 121 VVENDIGDCVVLFAALDQQKWLVNDFFDRANIASAILFLAFLSIATLLLLSPFNRIKPMP 180

Query: 181 TTQDLEAHSPQAQKCKAQSPQAHTVEAQSPQAHTVEAQ 218
           TTQDLEAHSPQAQK +AQSPQA  VEAQSPQA TVEAQ
Sbjct: 181 TTQDLEAHSPQAQKIQAQSPQAQKVEAQSPQAQTVEAQ 218

[Close]

BLAST of Cp4.1LG02g09980 vs. ExPASy TrEMBL
Match: A0A6J1C9J6 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111008706 PE=3 SV=1)

HSP 1 Score: 259 bits (661), Expect = 2.90e-84
Identity = 134/190 (70.53%), Postives = 162/190 (85.26%), Query Frame = 0


Query: 1   MDRMVVAFIGIGLRIFAFICLFIALVVIATDKLVLIDGSESTFNDIQGYRYVLSVAIIGL 60
           MD  VVAFI IGLR F FICL IALVVIATDKL LIDG ++TFNDI GYRYVLS+AIIGL
Sbjct: 1   MDPKVVAFIVIGLRSFTFICLLIALVVIATDKLALIDGYKATFNDIHGYRYVLSIAIIGL 60

Query: 61  VHTILQLGFSIYYAVTKNIPFWNGLPQFNYYTDQVISWVLVSAAGAGLAVSADRKMLLNQ 120
            HTILQLGFS+Y+ +T+NIPFWNGLPQFNYY DQV++WVL SAAGAG AV+A+ K L+++
Sbjct: 61  AHTILQLGFSLYHVLTQNIPFWNGLPQFNYYADQVLAWVLASAAGAGFAVTAELKRLVDE 120

Query: 121 VVENGIGDCGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNRLKPIP 180
            ++N +GD  +   A+DQQ+ L+DDFFD+ANIA+AILFLAFLS+AT+LLLSPFNR+KP+ 
Sbjct: 121 NIKNAVGDYELFIPAVDQQESLIDDFFDKANIATAILFLAFLSMATLLLLSPFNRIKPLE 180

Query: 181 TT-QDLEAHS 189
           TT QD EA +
Sbjct: 181 TTTQDPEAQA 190

[Close]

BLAST of Cp4.1LG02g09980 vs. ExPASy TrEMBL
Match: A0A5D3BGC2 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00320 PE=3 SV=1)

HSP 1 Score: 247 bits (631), Expect = 1.51e-79
Identity = 136/210 (64.76%), Postives = 161/210 (76.67%), Query Frame = 0


Query: 1   MDRMVVAFIGIGLRIFAFICLFIALVVIATDKLVLIDGSESTFNDIQGYRYVLSVAIIGL 60
           MD  V+  IGIG+RIF FICL IALVVIATDKL LI+G ++TFND+ GYRYVLSVA IGL
Sbjct: 1   MDPKVLPLIGIGIRIFVFICLLIALVVIATDKLSLINGFKATFNDVHGYRYVLSVATIGL 60

Query: 61  VHTILQLGFSIYYAVTKNIPFWNGLPQFNYYTDQVISWVLVSAAGAGLAVSADRKMLLNQ 120
            HTILQLGFSIY+ +T+NI FWNGLPQ NYY DQVI+WVL +A GAG AVS + K  +N 
Sbjct: 61  AHTILQLGFSIYHVLTQNILFWNGLPQVNYYADQVITWVLATAVGAGFAVSGELKSYVNS 120

Query: 121 VVENGIGDC-GVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNRLKPI 180
            +    GD  G   A +D+QK L+DDFFD+ANIA+AILFLAF+S+AT+LLLSPFNR+KP 
Sbjct: 121 RINKEFGDYYGFFSAQVDEQKSLIDDFFDKANIATAILFLAFISMATLLLLSPFNRIKPT 180

Query: 181 PTTQDLEAHSPQAQKCKAQSPQAHTVEAQS 209
           P    L    P+AQK +AQS QA   EAQS
Sbjct: 181 P----LPTQDPEAQKLEAQSSQAQQTEAQS 206

[Close]

BLAST of Cp4.1LG02g09980 vs. ExPASy TrEMBL
Match: A0A1S3BYF7 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103494310 PE=3 SV=1)

HSP 1 Score: 247 bits (631), Expect = 1.51e-79
Identity = 136/210 (64.76%), Postives = 161/210 (76.67%), Query Frame = 0


Query: 1   MDRMVVAFIGIGLRIFAFICLFIALVVIATDKLVLIDGSESTFNDIQGYRYVLSVAIIGL 60
           MD  V+  IGIG+RIF FICL IALVVIATDKL LI+G ++TFND+ GYRYVLSVA IGL
Sbjct: 1   MDPKVLPLIGIGIRIFVFICLLIALVVIATDKLSLINGFKATFNDVHGYRYVLSVATIGL 60

Query: 61  VHTILQLGFSIYYAVTKNIPFWNGLPQFNYYTDQVISWVLVSAAGAGLAVSADRKMLLNQ 120
            HTILQLGFSIY+ +T+NI FWNGLPQ NYY DQVI+WVL +A GAG AVS + K  +N 
Sbjct: 61  AHTILQLGFSIYHVLTQNILFWNGLPQVNYYADQVITWVLATAVGAGFAVSGELKSYVNS 120

Query: 121 VVENGIGDC-GVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNRLKPI 180
            +    GD  G   A +D+QK L+DDFFD+ANIA+AILFLAF+S+AT+LLLSPFNR+KP 
Sbjct: 121 RINKEFGDYYGFFSAQVDEQKSLIDDFFDKANIATAILFLAFISMATLLLLSPFNRIKPT 180

Query: 181 PTTQDLEAHSPQAQKCKAQSPQAHTVEAQS 209
           P    L    P+AQK +AQS QA   EAQS
Sbjct: 181 P----LPTQDPEAQKLEAQSSQAQQTEAQS 206

[Close]

BLAST of Cp4.1LG02g09980 vs. TAIR 10
Match: AT2G39530.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 75.9 bits (185), Expect = 5.1e-14
Identity = 59/175 (33.71%), Postives = 94/175 (53.71%), Query Frame = 0


Query: 13  LRIFAFICLFIALVVIATDKLVLIDGSES---TFNDIQGYRYVLSVAIIGLVHTILQLGF 72
           LR+     L I +V+I+T+ + L   S S    FND+  YRY+LS A+IGLV+ ++QL  
Sbjct: 20  LRVLTAAFLLITVVLISTNTVTLEISSTSIKLPFNDVYAYRYMLSAAVIGLVYAVVQLFL 79

Query: 73  SI-YYAVTKNIPFWNGLPQFNYYTDQVISWVLVSAAGAGLAVSADRKMLLNQVVENGIGD 132
           +I  +A  K  P      QF++Y D+VIS++L + + AG  VS D K     ++E     
Sbjct: 80  TISQFATGKTHPL---TYQFDFYGDKVISYLLATGSAAGFGVSKDLKDTYIALIE----- 139

Query: 133 CGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNRLK-PIPTT 183
               F + D     VD FF +   ++++L  AF+S+A + + S     K P+P +
Sbjct: 140 ----FDSTDP----VDKFFSKGYASASLLLFAFVSLAVLSVFSSLALSKRPVPVS 178

[Close]

BLAST of Cp4.1LG02g09980 vs. TAIR 10
Match: AT2G39518.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 72.8 bits (177), Expect = 4.3e-13
Identity = 51/169 (30.18%), Postives = 90/169 (53.25%), Query Frame = 0


Query: 13  LRIFAFICLFIALVVIATDKLVLIDGSEST---FNDIQGYRYVLSVAIIGLVHTILQLGF 72
           LR+   + L IAL++++T+ + ++    +    F D+  YRY+LS A+IGLV+ ++QL F
Sbjct: 20  LRVLTGVFLVIALIILSTNSVTIVSQGSALKFHFKDVYAYRYMLSAAVIGLVYAVIQLFF 79

Query: 73  SI-YYAVTKNIPFWNGLPQFNYYTDQVISWVLVSAAGAGLAVSADRKMLLNQVVENGIGD 132
           +I  +A     PF     Q ++Y D++IS+++ + + AG  V+ D K            D
Sbjct: 80  TISEFATGVKNPF---NYQLDFYGDKLISYLVATGSAAGFGVTKDLK------------D 139

Query: 133 CGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNRLK 178
             +   ALD     VD FF +   ++++L  AF+ +A + + S F   K
Sbjct: 140 TFLALVALDSTD-PVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAK 172

[Close]

BLAST of Cp4.1LG02g09980 vs. TAIR 10
Match: AT2G36330.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 47.8 bits (112), Expect = 1.5e-05
Identity = 46/171 (26.90%), Postives = 82/171 (47.95%), Query Frame = 0


Query: 5   VVAFIGIGLRIFAFICLFIALVVIATDKLVLIDGSESTFNDIQGYRYVLSVAIIGLVHTI 64
           VV F  +G R+   +   I+  ++A DK      S  +F+  + YR+ LSV ++  V++ 
Sbjct: 131 VVKFSALGFRLSEVVLALISFSIMAADKTK--GWSGDSFDRYKEYRFCLSVNVVAFVYSS 190

Query: 65  LQLGFSIYYAV-TKNIPFWNGLPQFNYYTDQVISWVLVSAAGAGLAVSADRKMLLNQVVE 124
            Q     Y+ V  K++   +  P F +  DQV++++L+SA+ A +         ++  V 
Sbjct: 191 FQACDLAYHLVKEKHLISHHLRPLFEFIIDQVLAYLLMSASTAAVT-------RVDDWVS 250

Query: 125 NGIGDCGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFN 175
           N                W  D+F + A+ + A+ FLAFL+ A   L+S +N
Sbjct: 251 N----------------WGKDEFTEMASASIAMSFLAFLAFAFSSLISGYN 276

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g09980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GWD5	7.2e-13	33.71	CASP-like protein 4D1 OS=Arabidopsis thaliana OX=3702 GN=At2g39530 PE=2 SV=1	[more]
D7LD60	3.6e-12	33.33	CASP-like protein 4D1 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT...	[more]
B9SXY8	4.7e-12	32.12	CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1	[more]
Q56X75	6.1e-12	30.18	CASP-like protein 4D2 OS=Arabidopsis thaliana OX=3702 GN=At2g39518 PE=2 SV=1	[more]
D7LD59	1.4e-11	30.06	CASP-like protein 4D2 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT...	[more]

BLAST of Cp4.1LG02g09980 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023524544.1	9.13e-161	100.00	CASP-like protein 4D1 [Cucurbita pepo subsp. pepo]	[more]
KAG7037064.1	2.80e-155	97.55	CASP-like protein 4D1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022949251.1	7.72e-145	91.60	CASP-like protein 4D1 [Cucurbita moschata]	[more]
KAG6607394.1	2.26e-138	89.80	CASP-like protein 4D1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022998177.1	8.95e-129	90.83	CASP-like protein 4D1 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG02g09980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GBH8	3.74e-145	91.60	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111452662 PE=3 SV=1	[more]
A0A6J1K769	4.34e-129	90.83	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111492902 PE=3 SV=1	[more]
A0A6J1C9J6	2.90e-84	70.53	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111008706 PE=3 SV=1	[more]
A0A5D3BGC2	1.51e-79	64.76	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00...	[more]
A0A1S3BYF7	1.51e-79	64.76	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103494310 PE=3 SV=1	[more]

BLAST of Cp4.1LG02g09980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39530.1	5.1e-14	33.71	Uncharacterised protein family (UPF0497)	[more]
AT2G39518.1	4.3e-13	30.18	Uncharacterised protein family (UPF0497)	[more]
AT2G36330.1	1.5e-05	26.90	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 6..162 e-value: 3.5E-16 score: 59.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 184..245
None	No IPR available	PANTHER	PTHR33573	CASP-LIKE PROTEIN 4A4	coord: 4..175
None	No IPR available	PANTHER	PTHR33573:SF17	CASP-LIKE PROTEIN 4D1	coord: 4..175

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG02g09980.1	Cp4.1LG02g09980.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane