Cp4.1LG02g09600 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG02g09600
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Descriptionankyrin repeat-containing protein ITN1-like
LocationCp4.1LG02: 8295037 .. 8295552 (-)
RNA-Seq ExpressionCp4.1LG02g09600
SyntenyCp4.1LG02g09600
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTCCGCACCCTTACAACATGCATTATAGCAACGACGGTTGGAAACCCCATGAGTTCTTCGATGAAACTCACCAGAATATGCTTGATAAAGGCAAAGAATGGATCAAGAAAACCTCCGAGTCTTGCTCCGCTGTTGCTGTCCTCAACAACTCCAAAACTGGCACTCCGGTTCTCCTCTCTGAACCTATCTACATGTTGTTCACCACCATGGACATCATCTCCCTCATCTCATCGCTCTCCTCCTCGGTTCTGTTTCTTTTGATTTTGACCTTGCCTTTTGAGATCGATTCTTTTCGACATGAATTGCCAATTCAACTGTCCTTGGGATTCAATCTGCTGTTCTTGTCGGTGGCGAGCACGATGATTGCGTTCGCTGTGGCCATCGTGCTCATTTTTAAATCGACCAACATGGTGTGGGCGGAATGCCTTTTGTGTTTGGTGACGCTTCTTCCAATAACCATTTTTGTAGTAATGAAGTTTCCGCTATTGCTGGAGCTGGGGAAAAGTGTTTGA

mRNA sequence

ATGATTCCGCACCCTTACAACATGCATTATAGCAACGACGGTTGGAAACCCCATGAGTTCTTCGATGAAACTCACCAGAATATGCTTGATAAAGGCAAAGAATGGATCAAGAAAACCTCCGAGTCTTGCTCCGCTGTTGCTGTCCTCAACAACTCCAAAACTGGCACTCCGGTTCTCCTCTCTGAACCTATCTACATGTTGTTCACCACCATGGACATCATCTCCCTCATCTCATCGCTCTCCTCCTCGGTTCTGTTTCTTTTGATTTTGACCTTGCCTTTTGAGATCGATTCTTTTCGACATGAATTGCCAATTCAACTGTCCTTGGGATTCAATCTGCTGTTCTTGTCGGTGGCGAGCACGATGATTGCGTTCGCTGTGGCCATCGTGCTCATTTTTAAATCGACCAACATGGTGTGGGCGGAATGCCTTTTGTGTTTGGTGACGCTTCTTCCAATAACCATTTTTGTAGTAATGAAGTTTCCGCTATTGCTGGAGCTGGGGAAAAGTGTTTGA

Coding sequence (CDS)

ATGATTCCGCACCCTTACAACATGCATTATAGCAACGACGGTTGGAAACCCCATGAGTTCTTCGATGAAACTCACCAGAATATGCTTGATAAAGGCAAAGAATGGATCAAGAAAACCTCCGAGTCTTGCTCCGCTGTTGCTGTCCTCAACAACTCCAAAACTGGCACTCCGGTTCTCCTCTCTGAACCTATCTACATGTTGTTCACCACCATGGACATCATCTCCCTCATCTCATCGCTCTCCTCCTCGGTTCTGTTTCTTTTGATTTTGACCTTGCCTTTTGAGATCGATTCTTTTCGACATGAATTGCCAATTCAACTGTCCTTGGGATTCAATCTGCTGTTCTTGTCGGTGGCGAGCACGATGATTGCGTTCGCTGTGGCCATCGTGCTCATTTTTAAATCGACCAACATGGTGTGGGCGGAATGCCTTTTGTGTTTGGTGACGCTTCTTCCAATAACCATTTTTGTAGTAATGAAGTTTCCGCTATTGCTGGAGCTGGGGAAAAGTGTTTGA

Protein sequence

MIPHPYNMHYSNDGWKPHEFFDETHQNMLDKGKEWIKKTSESCSAVAVLNNSKTGTPVLLSEPIYMLFTTMDIISLISSLSSSVLFLLILTLPFEIDSFRHELPIQLSLGFNLLFLSVASTMIAFAVAIVLIFKSTNMVWAECLLCLVTLLPITIFVVMKFPLLLELGKSV
Homology
BLAST of Cp4.1LG02g09600 vs. NCBI nr
Match: KAG7012620.1 (hypothetical protein SDJN02_25372, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 260 bits (665), Expect = 2.07e-83
Identity = 146/186 (78.49%), Postives = 156/186 (83.87%), Query Frame = 0

Query: 1   MIPHPYNMHYSNDGWKPHEFFDETHQNMLDKGKEWIKKTSESCSAVAVLN---------- 60
           MIPHPYNMHYS DGWKP EFFDETHQ+MLDKGKEWIKKTSESCSAVAVL           
Sbjct: 155 MIPHPYNMHYSKDGWKPREFFDETHQDMLDKGKEWIKKTSESCSAVAVLMATVAFAAAFT 214

Query: 61  -----NSKTGTPVLLSEPIYMLFTTMDIISLISSLSSSVLFLLILTLPFEIDSFRHELPI 120
                NSKTG+PVLLS+PIY+LFT +DI SLISSLSS VLFLLILT PFE+D+FR ELPI
Sbjct: 215 VPGGLNSKTGSPVLLSDPIYILFTALDIASLISSLSSLVLFLLILTSPFEMDAFRQELPI 274

Query: 121 QLSLGFNLLFLSVASTMIAFAVAIVLIFKSTNMVWAECLLCLVTLLPITIFVVMKFPLLL 171
           QLSLGFNLLFLSVASTMIAFAVA+VL  KSTNMVWAECLL LVTL PITIFVVMK  LL+
Sbjct: 275 QLSLGFNLLFLSVASTMIAFAVAVVLTLKSTNMVWAECLLYLVTLAPITIFVVMKLSLLM 334

BLAST of Cp4.1LG02g09600 vs. NCBI nr
Match: XP_022954461.1 (ankyrin repeat-containing protein ITN1-like [Cucurbita moschata])

HSP 1 Score: 260 bits (665), Expect = 5.92e-81
Identity = 146/186 (78.49%), Postives = 156/186 (83.87%), Query Frame = 0

Query: 1   MIPHPYNMHYSNDGWKPHEFFDETHQNMLDKGKEWIKKTSESCSAVAVLN---------- 60
           MIPHPYNMHYS DGWKP EFFDETHQ+MLDKGKEWIKKTSESCSAVAVL           
Sbjct: 366 MIPHPYNMHYSKDGWKPREFFDETHQDMLDKGKEWIKKTSESCSAVAVLMATVAFAAAFT 425

Query: 61  -----NSKTGTPVLLSEPIYMLFTTMDIISLISSLSSSVLFLLILTLPFEIDSFRHELPI 120
                NSKTG+PVLLS+PIY+LFT +DI SLISSLSS VLFLLILT PFE+D+FR ELPI
Sbjct: 426 VPGGLNSKTGSPVLLSDPIYILFTALDIASLISSLSSLVLFLLILTSPFEMDAFRQELPI 485

Query: 121 QLSLGFNLLFLSVASTMIAFAVAIVLIFKSTNMVWAECLLCLVTLLPITIFVVMKFPLLL 171
           QLSLGFNLLFLSVASTMIAFAVA+VL  KSTNMVWAECLL LVTL PITIFVVMK  LL+
Sbjct: 486 QLSLGFNLLFLSVASTMIAFAVAVVLTLKSTNMVWAECLLYLVTLAPITIFVVMKLSLLM 545

BLAST of Cp4.1LG02g09600 vs. NCBI nr
Match: KAG6573481.1 (Ankyrin repeat-containing protein NPR4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 260 bits (665), Expect = 2.73e-80
Identity = 146/186 (78.49%), Postives = 156/186 (83.87%), Query Frame = 0

Query: 1   MIPHPYNMHYSNDGWKPHEFFDETHQNMLDKGKEWIKKTSESCSAVAVLN---------- 60
           MIPHPYNMHYS DGWKP EFFDETHQ+MLDKGKEWIKKTSESCSAVAVL           
Sbjct: 434 MIPHPYNMHYSKDGWKPREFFDETHQDMLDKGKEWIKKTSESCSAVAVLMATVAFAAAFT 493

Query: 61  -----NSKTGTPVLLSEPIYMLFTTMDIISLISSLSSSVLFLLILTLPFEIDSFRHELPI 120
                NSKTG+PVLLS+PIY+LFT +DI SLISSLSS VLFLLILT PFE+D+FR ELPI
Sbjct: 494 VPGGLNSKTGSPVLLSDPIYILFTALDIASLISSLSSLVLFLLILTSPFEMDAFRQELPI 553

Query: 121 QLSLGFNLLFLSVASTMIAFAVAIVLIFKSTNMVWAECLLCLVTLLPITIFVVMKFPLLL 171
           QLSLGFNLLFLSVASTMIAFAVA+VL  KSTNMVWAECLL LVTL PITIFVVMK  LL+
Sbjct: 554 QLSLGFNLLFLSVASTMIAFAVAVVLTLKSTNMVWAECLLYLVTLAPITIFVVMKLSLLM 613

BLAST of Cp4.1LG02g09600 vs. NCBI nr
Match: KAG6573478.1 (Ankyrin repeat-containing protein NPR4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 260 bits (665), Expect = 4.71e-80
Identity = 146/186 (78.49%), Postives = 156/186 (83.87%), Query Frame = 0

Query: 1   MIPHPYNMHYSNDGWKPHEFFDETHQNMLDKGKEWIKKTSESCSAVAVLN---------- 60
           MIPHPYNMHYS DGWKP EFFDETHQ+MLDKGKEWIKKTSESCSAVAVL           
Sbjct: 460 MIPHPYNMHYSKDGWKPREFFDETHQDMLDKGKEWIKKTSESCSAVAVLMATVAFAAAFT 519

Query: 61  -----NSKTGTPVLLSEPIYMLFTTMDIISLISSLSSSVLFLLILTLPFEIDSFRHELPI 120
                NSKTG+PVLLS+PIY+LFT +DI SLISSLSS VLFLLILT PFE+D+FR ELPI
Sbjct: 520 VPGGLNSKTGSPVLLSDPIYILFTALDIASLISSLSSLVLFLLILTSPFEMDAFRQELPI 579

Query: 121 QLSLGFNLLFLSVASTMIAFAVAIVLIFKSTNMVWAECLLCLVTLLPITIFVVMKFPLLL 171
           QLSLGFNLLFLSVASTMIAFAVA+VL  KSTNMVWAECLL LVTL PITIFVVMK  LL+
Sbjct: 580 QLSLGFNLLFLSVASTMIAFAVAVVLTLKSTNMVWAECLLYLVTLAPITIFVVMKLSLLM 639

BLAST of Cp4.1LG02g09600 vs. NCBI nr
Match: KAG7012617.1 (Espin, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 237 bits (605), Expect = 1.52e-71
Identity = 137/186 (73.66%), Postives = 153/186 (82.26%), Query Frame = 0

Query: 1   MIPHPYNMHYSNDGWKPHEFFDETHQNMLDKGKEWIKKTSESCSAVAVLN---------- 60
           ++P  Y+MHYS DG KP EFF+ETH+++LDKGKEWIKKTSESCSAVAVL           
Sbjct: 420 VLPLLYSMHYSYDGRKPREFFEETHKDILDKGKEWIKKTSESCSAVAVLMATVAFAAAFT 479

Query: 61  -----NSKTGTPVLLSEPIYMLFTTMDIISLISSLSSSVLFLLILTLPFEIDSFRHELPI 120
                NSKTG+PVLLS+PIY+LFT +DI SLISSLSS VLFLLILT PFE+D+FR ELPI
Sbjct: 480 VPGGLNSKTGSPVLLSDPIYILFTALDIASLISSLSSLVLFLLILTSPFEMDAFRQELPI 539

Query: 121 QLSLGFNLLFLSVASTMIAFAVAIVLIFKSTNMVWAECLLCLVTLLPITIFVVMKFPLLL 171
           QLSLGFNLLFLSVASTMIAFAVA+VL  KSTNMVWAECLL LVTL PITIFVVMK  LL+
Sbjct: 540 QLSLGFNLLFLSVASTMIAFAVAVVLTLKSTNMVWAECLLYLVTLAPITIFVVMKLSLLM 599

BLAST of Cp4.1LG02g09600 vs. ExPASy TrEMBL
Match: A0A6J1GQZ1 (ankyrin repeat-containing protein ITN1-like OS=Cucurbita moschata OX=3662 GN=LOC111456726 PE=4 SV=1)

HSP 1 Score: 260 bits (665), Expect = 2.87e-81
Identity = 146/186 (78.49%), Postives = 156/186 (83.87%), Query Frame = 0

Query: 1   MIPHPYNMHYSNDGWKPHEFFDETHQNMLDKGKEWIKKTSESCSAVAVLN---------- 60
           MIPHPYNMHYS DGWKP EFFDETHQ+MLDKGKEWIKKTSESCSAVAVL           
Sbjct: 366 MIPHPYNMHYSKDGWKPREFFDETHQDMLDKGKEWIKKTSESCSAVAVLMATVAFAAAFT 425

Query: 61  -----NSKTGTPVLLSEPIYMLFTTMDIISLISSLSSSVLFLLILTLPFEIDSFRHELPI 120
                NSKTG+PVLLS+PIY+LFT +DI SLISSLSS VLFLLILT PFE+D+FR ELPI
Sbjct: 426 VPGGLNSKTGSPVLLSDPIYILFTALDIASLISSLSSLVLFLLILTSPFEMDAFRQELPI 485

Query: 121 QLSLGFNLLFLSVASTMIAFAVAIVLIFKSTNMVWAECLLCLVTLLPITIFVVMKFPLLL 171
           QLSLGFNLLFLSVASTMIAFAVA+VL  KSTNMVWAECLL LVTL PITIFVVMK  LL+
Sbjct: 486 QLSLGFNLLFLSVASTMIAFAVAVVLTLKSTNMVWAECLLYLVTLAPITIFVVMKLSLLM 545

BLAST of Cp4.1LG02g09600 vs. ExPASy TrEMBL
Match: A0A6J1JXD5 (uncharacterized protein LOC111490543 OS=Cucurbita maxima OX=3661 GN=LOC111490543 PE=4 SV=1)

HSP 1 Score: 237 bits (604), Expect = 2.06e-71
Identity = 136/186 (73.12%), Postives = 148/186 (79.57%), Query Frame = 0

Query: 1   MIPHPYNMHYSNDGWKPHEFFDETHQNMLDKGKEWIKKTSESCSAVAVLN---------- 60
           ++P  YNM YS + W P EFFDETH++MLDK KEWIKKTSESCSAVAVL           
Sbjct: 456 VLPLLYNMQYSKNQWNPREFFDETHKDMLDKAKEWIKKTSESCSAVAVLMATVAFAAAFT 515

Query: 61  -----NSKTGTPVLLSEPIYMLFTTMDIISLISSLSSSVLFLLILTLPFEIDSFRHELPI 120
                NSKTG+P+LLS+PIY+ F  +DI SLISSLSS VLFLLILT PFEID+FRHEL I
Sbjct: 516 VPGGLNSKTGSPILLSDPIYLFFAALDITSLISSLSSLVLFLLILTSPFEIDTFRHELTI 575

Query: 121 QLSLGFNLLFLSVASTMIAFAVAIVLIFKSTNMVWAECLLCLVTLLPITIFVVMKFPLLL 171
           QLSLGFNLLFLSVASTMIAFAVAIVL  KSTNMVWAECLL LVTL PI IFVVMK PLLL
Sbjct: 576 QLSLGFNLLFLSVASTMIAFAVAIVLTMKSTNMVWAECLLFLVTLAPIVIFVVMKLPLLL 635

BLAST of Cp4.1LG02g09600 vs. ExPASy TrEMBL
Match: A0A6J1K2S2 (ankyrin repeat-containing protein NPR4-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111490547 PE=4 SV=1)

HSP 1 Score: 197 bits (500), Expect = 1.26e-60
Identity = 115/161 (71.43%), Postives = 130/161 (80.75%), Query Frame = 0

Query: 26  QNMLDKGKEWIKKTSESCSAVAVLN---------------NSKTGTPVLLSEPIYMLFTT 85
           ++++DK KEW+KKTS+SCSAVAVL                NSKTG+PVLLS PIYMLFT 
Sbjct: 38  KDLIDKAKEWVKKTSQSCSAVAVLMASVTFAAAFTVPGGLNSKTGSPVLLSNPIYMLFTG 97

Query: 86  MDIISLISSLSSSVLFLLILTLPFEIDSFRHELPIQLSLGFNLLFLSVASTMIAFAVAIV 145
           +DI SLIS LSS +LFLLILT PFEIDSFR ELPIQLSLG NLLFLSVASTMIAFA+A+V
Sbjct: 98  LDITSLISLLSSLILFLLILTSPFEIDSFRQELPIQLSLGLNLLFLSVASTMIAFAMAVV 157

Query: 146 LIFKSTNMVWAECLLCLVTLLPITIFVVMKFPLLLELGKSV 171
           L  KSTNMVWAECLL LVTL+PI IF+VMK PLLLEL ++V
Sbjct: 158 LTMKSTNMVWAECLLYLVTLVPIIIFIVMKLPLLLELERNV 198

BLAST of Cp4.1LG02g09600 vs. ExPASy TrEMBL
Match: A0A6J1GT16 (uncharacterized protein LOC111456720 OS=Cucurbita moschata OX=3662 GN=LOC111456720 PE=4 SV=1)

HSP 1 Score: 196 bits (498), Expect = 8.24e-59
Identity = 114/166 (68.67%), Postives = 133/166 (80.12%), Query Frame = 0

Query: 21  FDETHQNMLDKGKEWIKKTSESCSAVAVLN---------------NSKTGTPVLLSEPIY 80
           F++TH+++LDKGKEW+KKTSESCSAVAVL                NSKTG+PVLLS P Y
Sbjct: 153 FNKTHKDLLDKGKEWVKKTSESCSAVAVLMASVTFAAAFTVPGGLNSKTGSPVLLSNPTY 212

Query: 81  MLFTTMDIISLISSLSSSVLFLLILTLPFEIDSFRHELPIQLSLGFNLLFLSVASTMIAF 140
           MLFT +DI SLISSLSS +LFLLILT PFE+D+FR +LPIQLS GFNLLFLSVASTMIAF
Sbjct: 213 MLFTGLDITSLISSLSSLILFLLILTSPFELDAFRQQLPIQLSFGFNLLFLSVASTMIAF 272

Query: 141 AVAIVLIFKSTNMVWAECLLCLVTLLPITIFVVMKFPLLLELGKSV 171
           A+A+VL  KSTNMVW E +L LVTL+PI IF+VMK  LLLEL ++V
Sbjct: 273 AMAVVLTMKSTNMVWVEWVLYLVTLVPIIIFMVMKLQLLLELERNV 318

BLAST of Cp4.1LG02g09600 vs. ExPASy TrEMBL
Match: A0A6J1IIE1 (uncharacterized protein LOC111473443 OS=Cucurbita maxima OX=3661 GN=LOC111473443 PE=4 SV=1)

HSP 1 Score: 174 bits (440), Expect = 1.32e-47
Identity = 98/185 (52.97%), Postives = 130/185 (70.27%), Query Frame = 0

Query: 2   IPHPYNMHYSNDGWKPHEFFDETHQNMLDKGKEWIKKTSESCSAVAVLN----------- 61
           IP  Y MH+S   W   EFF++TH  +L+ GKEW+KKTSESCSAVAVL            
Sbjct: 468 IPALYTMHHSKMRWTAREFFEKTHNKLLEDGKEWLKKTSESCSAVAVLISTVVFAAAYTV 527

Query: 62  ----NSKTGTPVLLSEPIYMLFTTMDIISLISSLSSSVLFLLILTLPFEIDSFRHELPIQ 121
               NSKTG+PVLL+EPIY++FT MDII L ++L+S VLFL +LT  F+ID F H LP++
Sbjct: 528 PGGLNSKTGSPVLLTEPIYIVFTIMDIIGLATALTSLVLFLSVLTSSFKIDDFLHTLPLK 587

Query: 122 LSLGFNLLFLSVASTMIAFAVAIVLIFKSTNMVWAECLLCLVTLLPITIFVVMKFPLLLE 171
           LS+GF LLFLSVA+TM+AFA+ IVL  K+  M W   LL L T  P+T+F++++ PL ++
Sbjct: 588 LSMGFQLLFLSVATTMMAFALTIVLTMKTEEMKWTVSLLYLATFFPVTMFIIIQMPLYVQ 647

BLAST of Cp4.1LG02g09600 vs. TAIR 10
Match: AT5G04680.1 (Ankyrin repeat family protein )

HSP 1 Score: 69.3 bits (168), Expect = 3.4e-12
Identity = 50/176 (28.41%), Postives = 91/176 (51.70%), Query Frame = 0

Query: 17  PHEFFDETHQNMLDKGKEWIKKTSESCSAVAVL-------------------------NN 76
           P E F + HQ +  + ++W+K T+ SCS VA L                         ++
Sbjct: 502 PIEIFAKEHQGLRQEAEKWMKDTAMSCSLVAALIVMVTFAALIITVIFAAVFTVSGGSDD 561

Query: 77  SKTGTPVLLSEPIYMLFTTMDIISLISSLSSSVLFLLILTLPFEIDSFRHELPIQLSLGF 136
           +  G P  L E  +++F   D+IS  ++ ++  +FL ILT  +  D F   LP ++  G 
Sbjct: 562 NSEGNPFHLYEQRFIIFIVSDLISCFAACTAVPIFLGILTARYSFDDFLVALPTKMITGL 621

Query: 137 NLLFLSVASTMIAFAVAIVLIFKSTNMVWAECLLCLVTLLPITIFVVMKFPLLLEL 168
           ++LF+S+A+ +IAF++ ++ +      + A  +LC    LP  +FV++++PLL E+
Sbjct: 622 SILFVSIAAMLIAFSLVLITMMNKGKWIVAPTILC--ACLPALLFVLLQYPLLKEM 675

BLAST of Cp4.1LG02g09600 vs. TAIR 10
Match: AT3G18670.1 (Ankyrin repeat family protein )

HSP 1 Score: 68.9 bits (167), Expect = 4.4e-12
Identity = 47/165 (28.48%), Postives = 90/165 (54.55%), Query Frame = 0

Query: 17  PHEFFDETHQNMLDKGKEWIKKTSESCSAVAVLNNS--------------KTGTPVLLSE 76
           P   F + H++++++G++W+K+T+ SC+ VA L  +                G P+ + +
Sbjct: 416 PKALFTDQHKDLVEQGEKWMKETATSCTVVAALITTMMFSSAFTVPGGYRSDGMPLYIHQ 475

Query: 77  PIYMLFTTMDIISLISSLSSSVLFLLILTLPFEIDSFRHELPIQLSLGFNLLFLSVASTM 136
             + +F   D ISL +S  S ++FL IL   +  + F   LP +L +G   LFLS+A+ +
Sbjct: 476 HRFKIFLISDAISLFTSCMSLLMFLGILKSRYREEDFLRSLPTKLIVGLLALFLSMATMI 535

Query: 137 IAFAVAIVLIFKSTNMVWAECLLCLVTLLPITIFVVMKFPLLLEL 168
           + F V ++ +     + W       + ++P+ +FVV++FP+LLE+
Sbjct: 536 VTFVVTLMTLV-GEKISWVSAQFMFLAVIPLGMFVVLQFPVLLEI 579

BLAST of Cp4.1LG02g09600 vs. TAIR 10
Match: AT5G04700.1 (Ankyrin repeat family protein )

HSP 1 Score: 68.9 bits (167), Expect = 4.4e-12
Identity = 54/168 (32.14%), Postives = 89/168 (52.98%), Query Frame = 0

Query: 17  PHEFFDETHQNMLDKGKEWIKKTSESCSAVAVL-----------------NNSKTGTPVL 76
           P E F + HQ +  + ++W+K T+ SCS VA L                 +NSK G P  
Sbjct: 486 PIEIFTKEHQGLRQEAEKWMKDTAMSCSLVAALIVTVTFAAVFTVPGGTDDNSK-GKPFH 545

Query: 77  LSEPIYMLFTTMDIISLISSLSSSVLFLLILTLPFEIDSFRHELPIQLSLGFNLLFLSVA 136
           L +  +++F   D+IS  +S +S ++FL ILT  +  D F   LP ++  G ++LF+S+A
Sbjct: 546 LRDRRFIIFIVSDLISCFASCTSVLIFLGILTARYSFDDFLVFLPTKMIAGLSILFVSIA 605

Query: 137 STMIAFAVAIVLIFKSTNMVWAECLLCLVTLLPITIFVVMKFPLLLEL 168
           + +IAF+ A+  +       W      L   LP  +FV++++PLL E+
Sbjct: 606 AMLIAFSSALFTMMGKEGK-WIVAPTILFACLPALLFVLLQYPLLKEM 651

BLAST of Cp4.1LG02g09600 vs. TAIR 10
Match: AT5G04690.1 (Ankyrin repeat family protein )

HSP 1 Score: 67.8 bits (164), Expect = 9.8e-12
Identity = 54/183 (29.51%), Postives = 92/183 (50.27%), Query Frame = 0

Query: 1   MIPHPYNMHYSNDGWKPHEFFDETHQNMLDKGKEWIKKTSESCSAVAVL----------- 60
           ++P   N   + +   P E F + H+ M  + ++W+K T+ SCS VA L           
Sbjct: 428 IVPAIENERVNTENLTPIEIFRKEHEAMRLEAEKWMKDTAMSCSLVAALIVTVTFAAIFT 487

Query: 61  -----NNSKTGTPVLLSEPIYMLFTTMDIISLISSLSSSVLFLLILTLPFEIDSFRHELP 120
                +++  G P    E I+++F   D+IS  ++ +S ++FL ILT  +  D F   LP
Sbjct: 488 VPGGTDDNSGGRPFHRHERIFVIFIVSDLISCFAACTSVLIFLGILTARYAFDDFLFSLP 547

Query: 121 IQLSLGFNLLFLSVASTMIAFAVAIVLIFKSTNMVWAECLLCLVTLLPITIFVVMKFPLL 168
             +  G + LF+S+A+ ++AF+ A+  IF   N  W           P  +FV++++PLL
Sbjct: 548 ANMIAGLSTLFVSIAAMLVAFSSALFTIF---NDPWIVAPTIFFACFPALLFVMIQYPLL 607

BLAST of Cp4.1LG02g09600 vs. TAIR 10
Match: AT3G54070.1 (Ankyrin repeat family protein )

HSP 1 Score: 62.4 bits (150), Expect = 4.1e-10
Identity = 52/192 (27.08%), Postives = 91/192 (47.40%), Query Frame = 0

Query: 1   MIPHPYNMHYSNDGWKPHEFFDETHQNMLDKGKEWIKKTSESCSAVAVL----------- 60
           ++P  Y    +  G   H+ F E H+N+  +G+ W+K+T+ +C   A L           
Sbjct: 366 IVPRSYIETKNTKGELAHDIFTEQHENLRKEGERWMKETATACMLGATLIATVVFAAAIT 425

Query: 61  ----------NNSKTGTPVLLSEPIYMLFTTMDIISLISSLSSSVLFLLILTLPFEIDSF 120
                       +  G P      ++ +FT  D ++L SS+ S V+FL I T  +  + F
Sbjct: 426 IPGGNDDSGDKANTLGFPNFRKRLLFDIFTLSDSVALFSSMMSIVIFLSIFTSRYAEEDF 485

Query: 121 RHELPIQLSLGFNLLFLSVASTMIAFAVAIVLIFKSTNMVWAECLLCLVTLLPITIFVVM 172
           R++LP +L  G + LF+S+ S ++AF  +++LI      +    + CL +L  +T F  +
Sbjct: 486 RYDLPTKLMFGLSALFISIISMILAFTFSMILIRVEKASLSLVLISCLASLTALT-FAYL 545

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG7012620.12.07e-8378.49hypothetical protein SDJN02_25372, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_022954461.15.92e-8178.49ankyrin repeat-containing protein ITN1-like [Cucurbita moschata][more]
KAG6573481.12.73e-8078.49Ankyrin repeat-containing protein NPR4, partial [Cucurbita argyrosperma subsp. s... [more]
KAG6573478.14.71e-8078.49Ankyrin repeat-containing protein NPR4, partial [Cucurbita argyrosperma subsp. s... [more]
KAG7012617.11.52e-7173.66Espin, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
Match NameE-valueIdentityDescription
A0A6J1GQZ12.87e-8178.49ankyrin repeat-containing protein ITN1-like OS=Cucurbita moschata OX=3662 GN=LOC... [more]
A0A6J1JXD52.06e-7173.12uncharacterized protein LOC111490543 OS=Cucurbita maxima OX=3661 GN=LOC111490543... [more]
A0A6J1K2S21.26e-6071.43ankyrin repeat-containing protein NPR4-like isoform X1 OS=Cucurbita maxima OX=36... [more]
A0A6J1GT168.24e-5968.67uncharacterized protein LOC111456720 OS=Cucurbita moschata OX=3662 GN=LOC1114567... [more]
A0A6J1IIE11.32e-4752.97uncharacterized protein LOC111473443 OS=Cucurbita maxima OX=3661 GN=LOC111473443... [more]
Match NameE-valueIdentityDescription
AT5G04680.13.4e-1228.41Ankyrin repeat family protein [more]
AT3G18670.14.4e-1228.48Ankyrin repeat family protein [more]
AT5G04700.14.4e-1232.14Ankyrin repeat family protein [more]
AT5G04690.19.8e-1229.51Ankyrin repeat family protein [more]
AT3G54070.14.1e-1027.08Ankyrin repeat family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026961PGG domainPFAMPF13962PGGcoord: 52..131
e-value: 3.3E-10
score: 39.8
NoneNo IPR availablePANTHERPTHR24177:SF215REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 17..153
NoneNo IPR availablePANTHERPTHR24177CASKINcoord: 17..153

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG02g09600.1Cp4.1LG02g09600.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane