Cp4.1LG02g09150 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG02g09150
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionUnknown protein
LocationCp4.1LG02: 7105803 .. 7106093 (+)
RNA-Seq ExpressionCp4.1LG02g09150
SyntenyCp4.1LG02g09150
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATTTCAAGTACACAAAAGAGAGACAGGAAAACATGATAAAATCAGAAAGGGGGGGAAAGGATGGGAACAGGGGAAGATTCAATGGGGGGGAAAAAACAGACGAAATTCCAGACCATGGCGTGACGTTCTCCGGCTTGGAAAGAAAGCTTCTGGTGGTTCATGGCCTGGGTATAAAGCTGGGAGAGAGAGTTGGCCGCACTGCAAAAGGAGGCGTACATGGTCCGATCTACCTCGTCGAGGCTGGTAGCGATGGATTTCCGCTTCTTGGCCATGGCGGAGGGGATTAA

mRNA sequence

ATGAATTTCAAGTACACAAAAGAGAGACAGGAAAACATGATAAAATCAGAAAGGGGGGGAAAGGATGGGAACAGGGGAAGATTCAATGGGGGGGAAAAAACAGACGAAATTCCAGACCATGGCGTGACGTTCTCCGGCTTGGAAAGAAAGCTTCTGGTGGTTCATGGCCTGGGTATAAAGCTGGGAGAGAGAGTTGGCCGCACTGCAAAAGGAGGCGTACATGGTCCGATCTACCTCGTCGAGGCTGGTAGCGATGGATTTCCGCTTCTTGGCCATGGCGGAGGGGATTAA

Coding sequence (CDS)

ATGAATTTCAAGTACACAAAAGAGAGACAGGAAAACATGATAAAATCAGAAAGGGGGGGAAAGGATGGGAACAGGGGAAGATTCAATGGGGGGGAAAAAACAGACGAAATTCCAGACCATGGCGTGACGTTCTCCGGCTTGGAAAGAAAGCTTCTGGTGGTTCATGGCCTGGGTATAAAGCTGGGAGAGAGAGTTGGCCGCACTGCAAAAGGAGGCGTACATGGTCCGATCTACCTCGTCGAGGCTGGTAGCGATGGATTTCCGCTTCTTGGCCATGGCGGAGGGGATTAA

Protein sequence

MNFKYTKERQENMIKSERGGKDGNRGRFNGGEKTDEIPDHGVTFSGLERKLLVVHGLGIKLGERVGRTAKGGVHGPIYLVEAGSDGFPLLGHGGGD
Homology
BLAST of Cp4.1LG02g09150 vs. NCBI nr
Match: KAG6592203.1 (hypothetical protein SDJN03_14549, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 84.7 bits (208), Expect = 5.58e-19
Identity = 41/51 (80.39%), Postives = 44/51 (86.27%), Query Frame = 0

Query: 35 DEIPDHGVTFSGLERKLLVVHGLGIKLGERVGRTAKGGVHGPIYLVEAGSD 85
          DEIP H +TFSGL+RKLLVVH LG+KL ERVG  AK GVHGPIYLVEAGSD
Sbjct: 11 DEIPHHRMTFSGLKRKLLVVHSLGVKLRERVGPAAKRGVHGPIYLVEAGSD 61

BLAST of Cp4.1LG02g09150 vs. NCBI nr
Match: CAN82701.1 (hypothetical protein VITISV_010840 [Vitis vinifera])

HSP 1 Score: 51.2 bits (121), Expect = 4.76e-06
Identity = 27/51 (52.94%), Postives = 35/51 (68.63%), Query Frame = 0

Query: 42 VTFSGLERKLLVVHGLGIKLGERVGRTAKGGVHGPIYLVEAGSDGFPLLGH 92
          + F+GL+ +LL+VHGL I+L +RV    KGGVHG I LV+A     PLL H
Sbjct: 1  MAFTGLKGELLLVHGLRIELRKRVRGATKGGVHGSIDLVQARRHRLPLLPH 51

BLAST of Cp4.1LG02g09150 vs. NCBI nr
Match: RRT43243.1 (hypothetical protein B296_00025316, partial [Ensete ventricosum] >RZS05635.1 hypothetical protein BHM03_00036206, partial [Ensete ventricosum])

HSP 1 Score: 48.1 bits (113), Expect = 2.54e-04
Identity = 24/51 (47.06%), Postives = 35/51 (68.63%), Query Frame = 0

Query: 42 VTFSGLERKLLVVHGLGIKLGERVGRTAKGGVHGPIYLVEAGSDGFPLLGH 92
          +T +GLE +LL+VHGL ++L ER+  +A+GG+  PI L+E     FPL  H
Sbjct: 1  MTLAGLEGELLLVHGLRVELRERISGSAEGGIQRPIGLIEPRRLRFPLPRH 51

BLAST of Cp4.1LG02g09150 vs. NCBI nr
Match: RWW90762.1 (hypothetical protein BHE74_00000240 [Ensete ventricosum])

HSP 1 Score: 48.1 bits (113), Expect = 2.84e-04
Identity = 24/51 (47.06%), Postives = 35/51 (68.63%), Query Frame = 0

Query: 42 VTFSGLERKLLVVHGLGIKLGERVGRTAKGGVHGPIYLVEAGSDGFPLLGH 92
          +T +GLE +LL+VHGL ++L ER+  +A+GG+  PI L+E     FPL  H
Sbjct: 1  MTLAGLEGELLLVHGLRVELRERISGSAEGGIQRPIGLIEPRRLRFPLPRH 51

BLAST of Cp4.1LG02g09150 vs. ExPASy TrEMBL
Match: A0A0A0K6C3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G298760 PE=4 SV=1)

HSP 1 Score: 106 bits (264), Expect = 1.31e-27
Identity = 50/58 (86.21%), Postives = 53/58 (91.38%), Query Frame = 0

Query: 35 DEIPDHGVTFSGLERKLLVVHGLGIKLGERVGRTAKGGVHGPIYLVEAGSDGFPLLGH 92
          DEIPDHGVTF+GL+RKLLVVH LG+KLGERV RTAK GVHGPIYLVEAG D FPLLGH
Sbjct: 19 DEIPDHGVTFTGLKRKLLVVHSLGVKLGERVSRTAKRGVHGPIYLVEAGGDRFPLLGH 76

BLAST of Cp4.1LG02g09150 vs. ExPASy TrEMBL
Match: A5AYH2 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_010840 PE=4 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 2.31e-06
Identity = 27/51 (52.94%), Postives = 35/51 (68.63%), Query Frame = 0

Query: 42 VTFSGLERKLLVVHGLGIKLGERVGRTAKGGVHGPIYLVEAGSDGFPLLGH 92
          + F+GL+ +LL+VHGL I+L +RV    KGGVHG I LV+A     PLL H
Sbjct: 1  MAFTGLKGELLLVHGLRIELRKRVRGATKGGVHGSIDLVQARRHRLPLLPH 51

BLAST of Cp4.1LG02g09150 vs. ExPASy TrEMBL
Match: A0A426XUQ5 (Uncharacterized protein (Fragment) OS=Ensete ventricosum OX=4639 GN=B296_00025316 PE=4 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.23e-04
Identity = 24/51 (47.06%), Postives = 35/51 (68.63%), Query Frame = 0

Query: 42 VTFSGLERKLLVVHGLGIKLGERVGRTAKGGVHGPIYLVEAGSDGFPLLGH 92
          +T +GLE +LL+VHGL ++L ER+  +A+GG+  PI L+E     FPL  H
Sbjct: 1  MTLAGLEGELLLVHGLRVELRERISGSAEGGIQRPIGLIEPRRLRFPLPRH 51

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6592203.15.58e-1980.39hypothetical protein SDJN03_14549, partial [Cucurbita argyrosperma subsp. sorori... [more]
CAN82701.14.76e-0652.94hypothetical protein VITISV_010840 [Vitis vinifera][more]
RRT43243.12.54e-0447.06hypothetical protein B296_00025316, partial [Ensete ventricosum] >RZS05635.1 hyp... [more]
RWW90762.12.84e-0447.06hypothetical protein BHE74_00000240 [Ensete ventricosum][more]
Match NameE-valueIdentityDescription
A0A0A0K6C31.31e-2786.21Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G298760 PE=4 SV=1[more]
A5AYH22.31e-0652.94Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_010840 PE=4 SV=1[more]
A0A426XUQ51.23e-0447.06Uncharacterized protein (Fragment) OS=Ensete ventricosum OX=4639 GN=B296_0002531... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..41

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG02g09150.1Cp4.1LG02g09150.1mRNA