Cp4.1LG02g08990 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG02g08990
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Zinc finger protein
Location	Cp4.1LG02: 6335387 .. 6335926 (+)
RNA-Seq Expression	Cp4.1LG02g08990
Synteny	Cp4.1LG02g08990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTCTCTTCACAAACAGTCAATGGCTACTTCAACAAGACAGCCAAAGAGAAACAAAACAAAACCCAAACGACAAATCCCATCAACCTTTTACCCTCAACCTAAGCCCCAACAATGACAATGATTTGGAAGAACTCAACCTCATTGACATCTTTGGTCATGCTTGTAAAGAAGTAGCAGCTGAGCCTAGAGTTTTCTCTTGCAATTATTGCCAAAGGAAGTTTTTTAGCTCACAAGCTCTTGGTGGCCACCAAAATGCTCATAGTCGAGAGAGAAAGCTGGCTAAAGCAGGTTTTGAAGACCCTTTCCATGGATCCTATAGATCATCCTTTGGAGTTCAAACAAATTCTATGGTGCATCGCAAGTTTTATAGGAAGCATGGAAGAGGGGAACTAGTTCGTGGGAGTTTTCGATCATGGAGCGGCGGTTGGAAGGCGTCTGTAGTCGACGTTGGGTCGTGGCATGAACAATATTCGAAGAGTAATAAACGTAATGAATCGCTCGAGCTAGAGTGTCTAGATTTGTCTCTTAAGCTGTGA

mRNA sequence

ATGAGTCTCTTCACAAACAGTCAATGGCTACTTCAACAAGACAGCCAAAGAGAAACAAAACAAAACCCAAACGACAAATCCCATCAACCTTTTACCCTCAACCTAAGCCCCAACAATGACAATGATTTGGAAGAACTCAACCTCATTGACATCTTTGGTCATGCTTGTAAAGAAGTAGCAGCTGAGCCTAGAGTTTTCTCTTGCAATTATTGCCAAAGGAAGTTTTTTAGCTCACAAGCTCTTGGTGGCCACCAAAATGCTCATAGTCGAGAGAGAAAGCTGGCTAAAGCAGGTTTTGAAGACCCTTTCCATGGATCCTATAGATCATCCTTTGGAGTTCAAACAAATTCTATGGTGCATCGCAAGTTTTATAGGAAGCATGGAAGAGGGGAACTAGTTCGTGGGAGTTTTCGATCATGGAGCGGCGGTTGGAAGGCGTCTGTAGTCGACGTTGGGTCGTGGCATGAACAATATTCGAAGAGTAATAAACGTAATGAATCGCTCGAGCTAGAGTGTCTAGATTTGTCTCTTAAGCTGTGA

Coding sequence (CDS)

ATGAGTCTCTTCACAAACAGTCAATGGCTACTTCAACAAGACAGCCAAAGAGAAACAAAACAAAACCCAAACGACAAATCCCATCAACCTTTTACCCTCAACCTAAGCCCCAACAATGACAATGATTTGGAAGAACTCAACCTCATTGACATCTTTGGTCATGCTTGTAAAGAAGTAGCAGCTGAGCCTAGAGTTTTCTCTTGCAATTATTGCCAAAGGAAGTTTTTTAGCTCACAAGCTCTTGGTGGCCACCAAAATGCTCATAGTCGAGAGAGAAAGCTGGCTAAAGCAGGTTTTGAAGACCCTTTCCATGGATCCTATAGATCATCCTTTGGAGTTCAAACAAATTCTATGGTGCATCGCAAGTTTTATAGGAAGCATGGAAGAGGGGAACTAGTTCGTGGGAGTTTTCGATCATGGAGCGGCGGTTGGAAGGCGTCTGTAGTCGACGTTGGGTCGTGGCATGAACAATATTCGAAGAGTAATAAACGTAATGAATCGCTCGAGCTAGAGTGTCTAGATTTGTCTCTTAAGCTGTGA

Protein sequence

MSLFTNSQWLLQQDSQRETKQNPNDKSHQPFTLNLSPNNDNDLEELNLIDIFGHACKEVAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFEDPFHGSYRSSFGVQTNSMVHRKFYRKHGRGELVRGSFRSWSGGWKASVVDVGSWHEQYSKSNKRNESLELECLDLSLKL

Homology

[Close]

BLAST of Cp4.1LG02g08990 vs. ExPASy Swiss-Prot
Match: Q42485 (Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.1e-14
Identity = 55/137 (40.15%), Postives = 66/137 (48.18%), Query Frame = 0


Query: 26  KSHQPFTLNLS--PNNDNDLEELNLIDIFGHAC---------KEVAAEPRVFSCNYCQRK 85
           + HQ   L L+          ELNLID F  +          +E  A+PRVFSCNYCQRK
Sbjct: 17  QGHQDLELGLTLLSRGTATSSELNLIDSFKTSSSSTSHHQHQQEQLADPRVFSCNYCQRK 76

Query: 86  FFSSQALGGHQNAHSRERKLAKAG----------------------------FEDPFHGS 122
           F+SSQALGGHQNAH RER LAK G                               P HGS
Sbjct: 77  FYSSQALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFGHGSVSRFASMASLPLHGS 136

[Close]

BLAST of Cp4.1LG02g08990 vs. ExPASy Swiss-Prot
Match: Q39262 (Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.8e-14
Identity = 48/104 (46.15%), Postives = 57/104 (54.81%), Query Frame = 0


Query: 41  NDLEELNLIDIFGHACKEV-----AAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLA 100
           N   ELNLID        V     + E ++FSCNYCQR F+SSQALGGHQNAH RER LA
Sbjct: 31  NSSHELNLIDCIDDTTSIVNESTTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLA 90

Query: 101 KA---------------GFED-PFHGSYRS--SFGVQTNSMVHR 122
           K                GF   PFHG Y +  S G+Q +S+ H+
Sbjct: 91  KRGQRMAASASAFGHPYGFSPLPFHGQYNNHRSLGIQAHSISHK 134

[Close]

BLAST of Cp4.1LG02g08990 vs. ExPASy Swiss-Prot
Match: Q39266 (Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.0e-11
Identity = 49/114 (42.98%), Postives = 61/114 (53.51%), Query Frame = 0


Query: 14  DSQRETKQNPNDKSHQPFTLNLSPNNDNDLEELNLIDIFGHACKEVAAE--PRVFSCNYC 73
           D+ RET  +   ++     L+   +N   L +L L D F    K    E  PRVFSCNYC
Sbjct: 6   DASRETPASRGGEASSNQDLSKPESNHVSL-DLKLNDTFNDDTKSTKCEANPRVFSCNYC 65

Query: 74  QRKFFSSQALGGHQNAHSRERKLAKAGFE-----DPFHGSY---RSSFGVQTNS 118
           +RKF+SSQALGGHQNAH RER +AK            H  Y    SS G+Q +S
Sbjct: 66  RRKFYSSQALGGHQNAHKRERTMAKRAMHMGRMFGHHHRPYTYTSSSLGMQAHS 118

[Close]

BLAST of Cp4.1LG02g08990 vs. ExPASy Swiss-Prot
Match: Q39263 (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 70.9 bits (172), Expect = 1.7e-11
Identity = 55/145 (37.93%), Postives = 69/145 (47.59%), Query Frame = 0


Query: 15  SQRETKQNPNDKSHQPFTLNLS------PNNDNDLEELNLIDIFGHAC----------KE 74
           SQ  +  +P  + ++P +LNLS       NN+ DLE  +L                  ++
Sbjct: 18  SQVASNLSPVGEDYKPISLNLSLSFNNNNNNNLDLESSSLTLPLSSTSESSNPEQQQQQQ 77

Query: 75  VAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAK----AGFEDPFHGSYRSSFGVQ 134
            +   RVFSCNYCQRKF+SSQALGGHQNAH RER LAK     G    F G   SS    
Sbjct: 78  PSVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSSNYAA 137

Query: 135 TNSMVHRKFYRKHGRGELVRGSFRS 140
             +         HG G     SFR+
Sbjct: 138 AATAAALSCLPLHGSGNGNMTSFRT 162

[Close]

BLAST of Cp4.1LG02g08990 vs. ExPASy Swiss-Prot
Match: Q39261 (Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.4e-10
Identity = 53/123 (43.09%), Postives = 66/123 (53.66%), Query Frame = 0


Query: 62  EPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFEDPFHGSYRSSFGVQTNSMVHR 121
           +PRVFSCNYCQRKF+SSQALGGHQNAH  ER LAK   E      +RSS     N++   
Sbjct: 48  QPRVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSRE-----LFRSS-----NTVDSD 107

Query: 122 KFYRKHGRGELVRGSFRSW--SGG---WKASVVDVGSWHEQYSKSNKRNESLELECLDLS 180
           + Y   GR EL    ++ +  SGG   + A  V      +   KS+          LDLS
Sbjct: 108 QPYPFSGRFELYGRGYQGFLESGGSRDFSARRVPESGLDQDQEKSH----------LDLS 150

[Close]

BLAST of Cp4.1LG02g08990 vs. NCBI nr
Match: KAG6607668.1 (Zinc finger protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 347 bits (890), Expect = 2.88e-120
Identity = 169/179 (94.41%), Postives = 170/179 (94.97%), Query Frame = 0


Query: 1   MSLFTNSQWLLQQDSQRETKQNPNDKSHQPFTLNLSPNNDNDLEELNLIDIFGHACKEVA 60
           MSLFTNSQWLLQQDSQ ETKQ+P DKSHQPFTLNL PNNDNDLEELNLIDIFGHACKE A
Sbjct: 1   MSLFTNSQWLLQQDSQTETKQSPKDKSHQPFTLNLCPNNDNDLEELNLIDIFGHACKEEA 60

Query: 61  AEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFEDPFHGSYRSSFGVQTNSMVH 120
           AEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFEDPFHGSYRSSFGVQTNSMV 
Sbjct: 61  AEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFEDPFHGSYRSSFGVQTNSMVL 120

Query: 121 RKFYRKHGRGELVRGSFRSWSGGWKASVVDVGSWHEQYSKSNKRNESLELECLDLSLKL 179
           RKFYRKHGRGELVRGSFRSW GGWKAS VDVG WHEQYSKS KRNESLELECLDLSLKL
Sbjct: 121 RKFYRKHGRGELVRGSFRSWRGGWKASAVDVGLWHEQYSKSTKRNESLELECLDLSLKL 179

[Close]

BLAST of Cp4.1LG02g08990 vs. NCBI nr
Match: KAG7028483.1 (Zinc finger protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 345 bits (885), Expect = 1.67e-119
Identity = 169/179 (94.41%), Postives = 170/179 (94.97%), Query Frame = 0


Query: 1   MSLFTNSQWLLQQDSQRETKQNPNDKSHQPFTLNLSPNNDNDLEELNLIDIFGHACKEVA 60
           MSLFTNSQWLLQQDSQ ETKQ+P DKSHQPFTLNLSPNNDNDLEELNLIDIFGHACKE A
Sbjct: 1   MSLFTNSQWLLQQDSQTETKQSPKDKSHQPFTLNLSPNNDNDLEELNLIDIFGHACKEEA 60

Query: 61  AEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFEDPFHGSYRSSFGVQTNSMVH 120
           AEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFEDPF G YRSSFGVQTNSMV 
Sbjct: 61  AEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFEDPFIGCYRSSFGVQTNSMVL 120

Query: 121 RKFYRKHGRGELVRGSFRSWSGGWKASVVDVGSWHEQYSKSNKRNESLELECLDLSLKL 179
           RKFYRKHGRGELVRGSFRSW GGWKAS VDVGSWHEQYSKS KRNESLELECLDLSLKL
Sbjct: 121 RKFYRKHGRGELVRGSFRSWRGGWKASAVDVGSWHEQYSKSTKRNESLELECLDLSLKL 179

[Close]

BLAST of Cp4.1LG02g08990 vs. NCBI nr
Match: KAF8407216.1 (hypothetical protein HHK36_006343 [Tetracentron sinense])

HSP 1 Score: 102 bits (254), Expect = 6.09e-23
Identity = 59/138 (42.75%), Postives = 77/138 (55.80%), Query Frame = 0


Query: 14  DSQRETKQNPNDKSHQPFT-LNLSPNNDNDLE--ELNLIDIFGHACKEVAA--EPRVFSC 73
           + Q++ K+   + +H     L+LS  + N +   ELNLI+ F   C + A+  EPRVFSC
Sbjct: 33  EKQKQEKEEEEEINHDLLLDLSLSTKHSNHITRPELNLINCFKVGCSQTASKTEPRVFSC 92

Query: 74  NYCQRKFFSSQALGGHQNAHSRERKLAKAGFED----------------------PFHGS 124
           NYCQRKF+SSQALGGHQNAH RER LAK G +                       P HG 
Sbjct: 93  NYCQRKFYSSQALGGHQNAHKRERTLAKKGHQKEAAVAFGHRHLYRHMFSRMASVPLHGG 152

[Close]

BLAST of Cp4.1LG02g08990 vs. NCBI nr
Match: XP_038896249.1 (zinc finger protein 3-like [Benincasa hispida])

HSP 1 Score: 100 bits (248), Expect = 3.87e-22
Identity = 72/194 (37.11%), Postives = 87/194 (44.85%), Query Frame = 0


Query: 44  EELNLIDIFG----------HACKEVAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERK 103
           EELNL+D F              +E AA+PRVFSCNYC RKFFSSQALGGHQNAHSRERK
Sbjct: 56  EELNLVDSFDADNLPNDRSYQGVEEAAAKPRVFSCNYCPRKFFSSQALGGHQNAHSRERK 115

Query: 104 LAKAGFED---------------PFHGSYRSSFGVQTNSMVHRKFYRKHGRGELVRGSFR 163
           +AK G +                P  G +  S G+Q  S++H+ F      G L      
Sbjct: 116 IAKTGNKLVTNSTGSKYSSVPSLPLQG-FNGSVGIQARSLIHKPFSHSPFFGSLHPFQLE 175

Query: 164 SWSGGWKASVVDVGSW--------------------------------HEQYSKSN-KRN 179
            WS     + V  G W                                 + +S SN   N
Sbjct: 176 VWSRQSLYTQVAAGQWPSPENYLSGTSPVPPSSSGAACCDAGRTLSLNSDSFSDSNCTHN 235

[Close]

BLAST of Cp4.1LG02g08990 vs. NCBI nr
Match: XP_028782579.1 (zinc finger protein 3-like [Prosopis alba])

HSP 1 Score: 98.2 bits (243), Expect = 3.04e-21
Identity = 59/135 (43.70%), Postives = 77/135 (57.04%), Query Frame = 0


Query: 15  SQRETKQNPNDKSHQPFTLNLSPNNDNDLE----ELNLIDIFGHACKEVAAE------PR 74
           +Q+E + +P D S +P  LNL+ +ND+  +    ELNLI+         + E      PR
Sbjct: 39  TQKEDQTHPQD-SARPLLLNLNLSNDDSADGSNPELNLINCLDAKSSVNSLESSHDLEPR 98

Query: 75  VFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFED------------------PFHGS 121
           +FSCNYCQRKF+SSQALGGHQNAH RER LAK G +                   P HGS
Sbjct: 99  IFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGHKVGAAVSVEFGQRYSSMASLPLHGS 158

[Close]

BLAST of Cp4.1LG02g08990 vs. ExPASy TrEMBL
Match: A0A7J0FZA7 (Zinc finger protein 3 OS=Actinidia rufa OX=165716 GN=Acr_16g0006530 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.77e-21
Identity = 64/143 (44.76%), Postives = 78/143 (54.55%), Query Frame = 0


Query: 14  DSQRETKQ----NPNDKSHQPFT-------LNLSPNNDNDLE-----ELNLIDIFGHACK 73
           +SQRE KQ      + + H+ FT       LN+S     DL+     ELNLI+ F     
Sbjct: 31  ESQREGKQVEDQQDDHQKHKQFTNTDLVLDLNVSKE---DLDQGSKPELNLIECFNKGSS 90

Query: 74  EV-AAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFED--------------- 124
                EPRVFSCNYCQRKF+SSQALGGHQNAH RER LAK G +                
Sbjct: 91  PSHEVEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGHKIDHGAYPQRFASLASL 150

[Close]

BLAST of Cp4.1LG02g08990 vs. ExPASy TrEMBL
Match: A0A2R6QFZ4 (Zinc finger protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc17905 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.77e-21
Identity = 64/143 (44.76%), Postives = 78/143 (54.55%), Query Frame = 0


Query: 14  DSQRETKQ----NPNDKSHQPFT-------LNLSPNNDNDLE-----ELNLIDIFGHACK 73
           +SQRE KQ      + + H+ FT       LN+S     DL+     ELNLI+ F     
Sbjct: 31  ESQREGKQVEDQQDDHQKHKQFTNTDLVLDLNVSKE---DLDQGSKPELNLIECFNKGSS 90

Query: 74  EV-AAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFED--------------- 124
                EPRVFSCNYCQRKF+SSQALGGHQNAH RER LAK G +                
Sbjct: 91  PSHEVEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGHKIDHGAYPQRFASLASL 150

[Close]

BLAST of Cp4.1LG02g08990 vs. ExPASy TrEMBL
Match: A0A2R6QMR5 (Zinc finger protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc15471 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 5.56e-21
Identity = 64/168 (38.10%), Postives = 86/168 (51.19%), Query Frame = 0


Query: 13  QDSQRETKQNPNDKSHQPFTLNLSPNNDNDLEELNLIDIFGHACKEVA--------AEPR 72
           +D++ E ++   ++  Q   L ++P+  N   ELNLID   +   + +        AEPR
Sbjct: 34  EDTREEREKEEEEEEDQE--LEMTPDKFN--PELNLIDCLNNDSTQTSPEIPQESDAEPR 93

Query: 73  VFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFED----------------------P 132
           VFSCNYCQRKFFSSQALGGHQNAH RER LAK G +                       P
Sbjct: 94  VFSCNYCQRKFFSSQALGGHQNAHKRERTLAKRGLKIGSPRGHSHAYHHHHHYSSMSSLP 153

Query: 133 FHGSYRSSFGVQTNSMVHRKFYRKHGRGELVRGSFRSWSGGWKASVVD 150
            HG+Y  S G+Q +SM+H+  Y     G  +RG +     GW    +D
Sbjct: 154 LHGAYNRSLGIQVHSMIHKPSYIPSSSG--IRGIYGH--SGWFRHPID 193

[Close]

BLAST of Cp4.1LG02g08990 vs. ExPASy TrEMBL
Match: A0A5D3E105 (Zinc finger protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G002230 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 5.98e-21
Identity = 63/125 (50.40%), Postives = 71/125 (56.80%), Query Frame = 0


Query: 22  NPNDKSHQPFTLNLSPNNDNDL---EELNLIDIFGHACK----EVAAEPRVFSCNYCQRK 81
           NPN  SH    L+LS NND+D     ELNLID F         +   EPRVFSCNYCQRK
Sbjct: 37  NPN--SHMGLDLSLS-NNDSDHGSNPELNLIDCFDANLATEPTDTETEPRVFSCNYCQRK 96

Query: 82  FFSSQALGGHQNAHSRERKLAKA----------GFED--------PFHGSYRSSFGVQTN 121
           F+SSQALGGHQNAH RER LAK           G           P HGS+  S G+Q +
Sbjct: 97  FYSSQALGGHQNAHKRERTLAKRTQRVGSGSNFGLAHRYSSLASLPLHGSFNRSLGIQAH 156

[Close]

BLAST of Cp4.1LG02g08990 vs. ExPASy TrEMBL
Match: A0A1S3BZI2 (zinc finger protein 3-like OS=Cucumis melo OX=3656 GN=LOC103494887 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 5.98e-21
Identity = 63/125 (50.40%), Postives = 71/125 (56.80%), Query Frame = 0


Query: 22  NPNDKSHQPFTLNLSPNNDNDL---EELNLIDIFGHACK----EVAAEPRVFSCNYCQRK 81
           NPN  SH    L+LS NND+D     ELNLID F         +   EPRVFSCNYCQRK
Sbjct: 37  NPN--SHMGLDLSLS-NNDSDHGSNPELNLIDCFDANLATEPTDTETEPRVFSCNYCQRK 96

Query: 82  FFSSQALGGHQNAHSRERKLAKA----------GFED--------PFHGSYRSSFGVQTN 121
           F+SSQALGGHQNAH RER LAK           G           P HGS+  S G+Q +
Sbjct: 97  FYSSQALGGHQNAHKRERTLAKRTQRVGSGSNFGLAHRYSSLASLPLHGSFNRSLGIQAH 156

[Close]

BLAST of Cp4.1LG02g08990 vs. TAIR 10
Match: AT1G80730.1 (zinc-finger protein 1 )

HSP 1 Score: 80.5 bits (197), Expect = 1.5e-15
Identity = 55/137 (40.15%), Postives = 66/137 (48.18%), Query Frame = 0


Query: 26  KSHQPFTLNLS--PNNDNDLEELNLIDIFGHAC---------KEVAAEPRVFSCNYCQRK 85
           + HQ   L L+          ELNLID F  +          +E  A+PRVFSCNYCQRK
Sbjct: 17  QGHQDLELGLTLLSRGTATSSELNLIDSFKTSSSSTSHHQHQQEQLADPRVFSCNYCQRK 76

Query: 86  FFSSQALGGHQNAHSRERKLAKAG----------------------------FEDPFHGS 122
           F+SSQALGGHQNAH RER LAK G                               P HGS
Sbjct: 77  FYSSQALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFGHGSVSRFASMASLPLHGS 136

[Close]

BLAST of Cp4.1LG02g08990 vs. TAIR 10
Match: AT5G25160.1 (zinc finger protein 3 )

HSP 1 Score: 80.1 bits (196), Expect = 2.0e-15
Identity = 48/104 (46.15%), Postives = 57/104 (54.81%), Query Frame = 0


Query: 41  NDLEELNLIDIFGHACKEV-----AAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLA 100
           N   ELNLID        V     + E ++FSCNYCQR F+SSQALGGHQNAH RER LA
Sbjct: 31  NSSHELNLIDCIDDTTSIVNESTTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLA 90

Query: 101 KA---------------GFED-PFHGSYRS--SFGVQTNSMVHR 122
           K                GF   PFHG Y +  S G+Q +S+ H+
Sbjct: 91  KRGQRMAASASAFGHPYGFSPLPFHGQYNNHRSLGIQAHSISHK 134

[Close]

BLAST of Cp4.1LG02g08990 vs. TAIR 10
Match: AT5G10970.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 77.4 bits (189), Expect = 1.3e-14
Identity = 44/100 (44.00%), Postives = 55/100 (55.00%), Query Frame = 0


Query: 44  EELNLIDIFGHAC------KEVAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKA 103
           +ELNL+D               + E ++FSCNYCQR F+SSQALGGHQNAH RER LAK 
Sbjct: 76  QELNLLDCLETGVVTPSFNGSTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKR 135

Query: 104 G---------------FEDPFHGSYRS-SFGVQTNSMVHR 122
           G                  PFHG Y + + G+Q +SM H+
Sbjct: 136 GQRMASAAAFGHPYGFAPVPFHGQYSNRTLGIQAHSMSHK 175

[Close]

BLAST of Cp4.1LG02g08990 vs. TAIR 10
Match: AT1G24625.1 (zinc finger protein 7 )

HSP 1 Score: 71.6 bits (174), Expect = 7.1e-13
Identity = 49/114 (42.98%), Postives = 61/114 (53.51%), Query Frame = 0


Query: 14  DSQRETKQNPNDKSHQPFTLNLSPNNDNDLEELNLIDIFGHACKEVAAE--PRVFSCNYC 73
           D+ RET  +   ++     L+   +N   L +L L D F    K    E  PRVFSCNYC
Sbjct: 6   DASRETPASRGGEASSNQDLSKPESNHVSL-DLKLNDTFNDDTKSTKCEANPRVFSCNYC 65

Query: 74  QRKFFSSQALGGHQNAHSRERKLAKAGFE-----DPFHGSY---RSSFGVQTNS 118
           +RKF+SSQALGGHQNAH RER +AK            H  Y    SS G+Q +S
Sbjct: 66  RRKFYSSQALGGHQNAHKRERTMAKRAMHMGRMFGHHHRPYTYTSSSLGMQAHS 118

[Close]

BLAST of Cp4.1LG02g08990 vs. TAIR 10
Match: AT1G66140.1 (zinc finger protein 4 )

HSP 1 Score: 70.9 bits (172), Expect = 1.2e-12
Identity = 55/145 (37.93%), Postives = 69/145 (47.59%), Query Frame = 0


Query: 15  SQRETKQNPNDKSHQPFTLNLS------PNNDNDLEELNLIDIFGHAC----------KE 74
           SQ  +  +P  + ++P +LNLS       NN+ DLE  +L                  ++
Sbjct: 18  SQVASNLSPVGEDYKPISLNLSLSFNNNNNNNLDLESSSLTLPLSSTSESSNPEQQQQQQ 77

Query: 75  VAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAK----AGFEDPFHGSYRSSFGVQ 134
            +   RVFSCNYCQRKF+SSQALGGHQNAH RER LAK     G    F G   SS    
Sbjct: 78  PSVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSSNYAA 137

Query: 135 TNSMVHRKFYRKHGRGELVRGSFRS 140
             +         HG G     SFR+
Sbjct: 138 AATAAALSCLPLHGSGNGNMTSFRT 162

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g08990 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q42485	2.1e-14	40.15	Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1	[more]
Q39262	2.8e-14	46.15	Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1	[more]
Q39266	1.0e-11	42.98	Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1	[more]
Q39263	1.7e-11	37.93	Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2	[more]
Q39261	1.4e-10	43.09	Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1	[more]

BLAST of Cp4.1LG02g08990 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6607668.1	2.88e-120	94.41	Zinc finger protein 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7028483.1	1.67e-119	94.41	Zinc finger protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAF8407216.1	6.09e-23	42.75	hypothetical protein HHK36_006343 [Tetracentron sinense]	[more]
XP_038896249.1	3.87e-22	37.11	zinc finger protein 3-like [Benincasa hispida]	[more]
XP_028782579.1	3.04e-21	43.70	zinc finger protein 3-like [Prosopis alba]	[more]

BLAST of Cp4.1LG02g08990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7J0FZA7	1.77e-21	44.76	Zinc finger protein 3 OS=Actinidia rufa OX=165716 GN=Acr_16g0006530 PE=4 SV=1	[more]
A0A2R6QFZ4	1.77e-21	44.76	Zinc finger protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Ac...	[more]
A0A2R6QMR5	5.56e-21	38.10	Zinc finger protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Ac...	[more]
A0A5D3E105	5.98e-21	50.40	Zinc finger protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3BZI2	5.98e-21	50.40	zinc finger protein 3-like OS=Cucumis melo OX=3656 GN=LOC103494887 PE=4 SV=1	[more]

BLAST of Cp4.1LG02g08990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80730.1	1.5e-15	40.15	zinc-finger protein 1	[more]
AT5G25160.1	2.0e-15	46.15	zinc finger protein 3	[more]
AT5G10970.1	1.3e-14	44.00	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT1G24625.1	7.1e-13	42.98	zinc finger protein 7	[more]
AT1G66140.1	1.2e-12	37.93	zinc finger protein 4	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 51..104 e-value: 8.2E-6 score: 27.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..38
None	No IPR available	PANTHER	PTHR47287:SF1	ZINC FINGER PROTEIN 1-LIKE	coord: 13..98
IPR044246	Zinc finger protein 3-like	PANTHER	PTHR47287	C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN	coord: 13..98
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 68..88
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 66..93 score: 11.759394
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 63..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG02g08990.1	Cp4.1LG02g08990.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009788	negative regulation of abscisic acid-activated signaling pathway