Cp4.1LG02g08780 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG02g08780
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	YqaJ domain-containing protein
Location	Cp4.1LG02: 6521386 .. 6522294 (+)
RNA-Seq Expression	Cp4.1LG02g08780
Synteny	Cp4.1LG02g08780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCAATTGCAAAAACATATTTGCACGCACTCAAACTATTAGGAACTGGTCTAGATGCAATTTCAATTCTGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTCAAATTCGAAACCGGAAATTATTATTCTGTTCTTCAGTCCTCTAGTTTTCAGCATTGGTTCAAAAATTGGAAAGAACTTCGGAAGCATAAGTTAACAGCAAGTACTTTTGCTGGGGCTATTGGGTTTTGGCCTCGTCGAAGGGCACAGTTGTGGTTAGAGAAACTTGGGGCAATTGACCAGTTTTCTGGTAATCTTGCAACTTGTTGGAGTAACATGAAAGAAGAAGAGGCCCTTGAGCGATATAAGCTGATTACAGGGAACTCTGTTTTGTTTCCTGAGTTTCAAGTCTATGAGAAAGGAAACTCTGAATATGATTGGTTAGCTGCTTCACCTGATGGTGCAATTGACAAGATGGTCTATGGATTGCCCTCACGAGGTGTGTTGGAGATTAAGTGCCCATTTTTTGATGGTGATATGGCAAAGGCTTCACCATGGTCTCGAGTTCCTCTTTACTGTATTCCTCAGGCTCAAGGTTTGATGGAAATAATGGATAGAGATTGGATGGATTTTTATGTTTGGACTCCTAAAGGTAGTAGTTTGTTTAGATTGTACCGAGATGCCGAATATTGGGAGGTTTTGAAAATTGCTTTGTACGATTTTTGGTGGAAGCATGTTCAACCAGCAAGAGAGATGTGTAGTAAATATTCCATTACAAATCCCCTCATTGAGCTGAAGTCTCTTAGGCCATCACCCAAGCATGAGTTGTGCAGTTATATAGTTTGTGAAAGCAAACGGGTTGTTGATAATTCTGAGTTGCTCTTGCGTGAATTTAATGGAAGACTTCAAACCTGA

mRNA sequence

ATGTTCAATTGCAAAAACATATTTGCACGCACTCAAACTATTAGGAACTGGTCTAGATGCAATTTCAATTCTGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTCAAATTCGAAACCGGAAATTATTATTCTGTTCTTCAGTCCTCTAGTTTTCAGCATTGGTTCAAAAATTGGAAAGAACTTCGGAAGCATAAGTTAACAGCAAGTACTTTTGCTGGGGCTATTGGGTTTTGGCCTCGTCGAAGGGCACAGTTGTGGTTAGAGAAACTTGGGGCAATTGACCAGTTTTCTGGTAATCTTGCAACTTGTTGGAGTAACATGAAAGAAGAAGAGGCCCTTGAGCGATATAAGCTGATTACAGGGAACTCTGTTTTGTTTCCTGAGTTTCAAGTCTATGAGAAAGGAAACTCTGAATATGATTGGTTAGCTGCTTCACCTGATGGTGCAATTGACAAGATGGTCTATGGATTGCCCTCACGAGGTGTGTTGGAGATTAAGTGCCCATTTTTTGATGGTGATATGGCAAAGGCTTCACCATGGTCTCGAGTTCCTCTTTACTGTATTCCTCAGGCTCAAGGTTTGATGGAAATAATGGATAGAGATTGGATGGATTTTTATGTTTGGACTCCTAAAGGTAGTAGTTTGTTTAGATTGTACCGAGATGCCGAATATTGGGAGGTTTTGAAAATTGCTTTGTACGATTTTTGGTGGAAGCATGTTCAACCAGCAAGAGAGATGTGTAGTAAATATTCCATTACAAATCCCCTCATTGAGCTGAAGTCTCTTAGGCCATCACCCAAGCATGAGTTGTGCAGTTATATAGTTTGTGAAAGCAAACGGGTTGTTGATAATTCTGAGTTGCTCTTGCGTGAATTTAATGGAAGACTTCAAACCTGA

Coding sequence (CDS)

ATGTTCAATTGCAAAAACATATTTGCACGCACTCAAACTATTAGGAACTGGTCTAGATGCAATTTCAATTCTGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTCAAATTCGAAACCGGAAATTATTATTCTGTTCTTCAGTCCTCTAGTTTTCAGCATTGGTTCAAAAATTGGAAAGAACTTCGGAAGCATAAGTTAACAGCAAGTACTTTTGCTGGGGCTATTGGGTTTTGGCCTCGTCGAAGGGCACAGTTGTGGTTAGAGAAACTTGGGGCAATTGACCAGTTTTCTGGTAATCTTGCAACTTGTTGGAGTAACATGAAAGAAGAAGAGGCCCTTGAGCGATATAAGCTGATTACAGGGAACTCTGTTTTGTTTCCTGAGTTTCAAGTCTATGAGAAAGGAAACTCTGAATATGATTGGTTAGCTGCTTCACCTGATGGTGCAATTGACAAGATGGTCTATGGATTGCCCTCACGAGGTGTGTTGGAGATTAAGTGCCCATTTTTTGATGGTGATATGGCAAAGGCTTCACCATGGTCTCGAGTTCCTCTTTACTGTATTCCTCAGGCTCAAGGTTTGATGGAAATAATGGATAGAGATTGGATGGATTTTTATGTTTGGACTCCTAAAGGTAGTAGTTTGTTTAGATTGTACCGAGATGCCGAATATTGGGAGGTTTTGAAAATTGCTTTGTACGATTTTTGGTGGAAGCATGTTCAACCAGCAAGAGAGATGTGTAGTAAATATTCCATTACAAATCCCCTCATTGAGCTGAAGTCTCTTAGGCCATCACCCAAGCATGAGTTGTGCAGTTATATAGTTTGTGAAAGCAAACGGGTTGTTGATAATTCTGAGTTGCTCTTGCGTGAATTTAATGGAAGACTTCAAACCTGA

Protein sequence

MFNCKNIFARTQTIRNWSRCNFNSASSSSSSSSSSSSSFKFETGNYYSVLQSSSFQHWFKNWKELRKHKLTASTFAGAIGFWPRRRAQLWLEKLGAIDQFSGNLATCWSNMKEEEALERYKLITGNSVLFPEFQVYEKGNSEYDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFDGDMAKASPWSRVPLYCIPQAQGLMEIMDRDWMDFYVWTPKGSSLFRLYRDAEYWEVLKIALYDFWWKHVQPAREMCSKYSITNPLIELKSLRPSPKHELCSYIVCESKRVVDNSELLLREFNGRLQT

Homology

[Close]

BLAST of Cp4.1LG02g08780 vs. NCBI nr
Match: XP_023522491.1 (uncharacterized protein LOC111786473 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 622 bits (1605), Expect = 3.63e-225
Identity = 302/302 (100.00%), Postives = 302/302 (100.00%), Query Frame = 0


Query: 1   MFNCKNIFARTQTIRNWSRCNFNSASSSSSSSSSSSSSFKFETGNYYSVLQSSSFQHWFK 60
           MFNCKNIFARTQTIRNWSRCNFNSASSSSSSSSSSSSSFKFETGNYYSVLQSSSFQHWFK
Sbjct: 1   MFNCKNIFARTQTIRNWSRCNFNSASSSSSSSSSSSSSFKFETGNYYSVLQSSSFQHWFK 60

Query: 61  NWKELRKHKLTASTFAGAIGFWPRRRAQLWLEKLGAIDQFSGNLATCWSNMKEEEALERY 120
           NWKELRKHKLTASTFAGAIGFWPRRRAQLWLEKLGAIDQFSGNLATCWSNMKEEEALERY
Sbjct: 61  NWKELRKHKLTASTFAGAIGFWPRRRAQLWLEKLGAIDQFSGNLATCWSNMKEEEALERY 120

Query: 121 KLITGNSVLFPEFQVYEKGNSEYDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFDGDMAK 180
           KLITGNSVLFPEFQVYEKGNSEYDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFDGDMAK
Sbjct: 121 KLITGNSVLFPEFQVYEKGNSEYDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFDGDMAK 180

Query: 181 ASPWSRVPLYCIPQAQGLMEIMDRDWMDFYVWTPKGSSLFRLYRDAEYWEVLKIALYDFW 240
           ASPWSRVPLYCIPQAQGLMEIMDRDWMDFYVWTPKGSSLFRLYRDAEYWEVLKIALYDFW
Sbjct: 181 ASPWSRVPLYCIPQAQGLMEIMDRDWMDFYVWTPKGSSLFRLYRDAEYWEVLKIALYDFW 240

Query: 241 WKHVQPAREMCSKYSITNPLIELKSLRPSPKHELCSYIVCESKRVVDNSELLLREFNGRL 300
           WKHVQPAREMCSKYSITNPLIELKSLRPSPKHELCSYIVCESKRVVDNSELLLREFNGRL
Sbjct: 241 WKHVQPAREMCSKYSITNPLIELKSLRPSPKHELCSYIVCESKRVVDNSELLLREFNGRL 300

Query: 301 QT 302
           QT
Sbjct: 301 QT 302

[Close]

BLAST of Cp4.1LG02g08780 vs. NCBI nr
Match: XP_022926185.1 (uncharacterized protein LOC111433377 [Cucurbita moschata] >XP_022926187.1 uncharacterized protein LOC111433377 [Cucurbita moschata])

HSP 1 Score: 607 bits (1566), Expect = 2.66e-219
Identity = 295/302 (97.68%), Postives = 295/302 (97.68%), Query Frame = 0


Query: 1   MFNCKNIFARTQTIRNWSRCNFNSASSSSSSSSSSSSSFKFETGNYYSVLQSSSFQHWFK 60
           MFNCKNIFARTQTIRNWSRCNFNSASSSSSSSS     FKFETGNYYSVLQSSSFQHWFK
Sbjct: 1   MFNCKNIFARTQTIRNWSRCNFNSASSSSSSSS-----FKFETGNYYSVLQSSSFQHWFK 60

Query: 61  NWKELRKHKLTASTFAGAIGFWPRRRAQLWLEKLGAIDQFSGNLATCWSNMKEEEALERY 120
           NWKE RKHKLTASTFAGAIGFWPRRRAQLWLEKLGAIDQFSGNLATCWSNMKEEEALERY
Sbjct: 61  NWKEFRKHKLTASTFAGAIGFWPRRRAQLWLEKLGAIDQFSGNLATCWSNMKEEEALERY 120

Query: 121 KLITGNSVLFPEFQVYEKGNSEYDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFDGDMAK 180
           KLITGNSVLFPEFQVYEKGNSEYDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFDGDMAK
Sbjct: 121 KLITGNSVLFPEFQVYEKGNSEYDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFDGDMAK 180

Query: 181 ASPWSRVPLYCIPQAQGLMEIMDRDWMDFYVWTPKGSSLFRLYRDAEYWEVLKIALYDFW 240
           ASPWSRVPLYCIPQAQGLMEIMDRDWMDFYVWTPKGSSLFRLYRDAEYWEVLKIAL DFW
Sbjct: 181 ASPWSRVPLYCIPQAQGLMEIMDRDWMDFYVWTPKGSSLFRLYRDAEYWEVLKIALSDFW 240

Query: 241 WKHVQPAREMCSKYSITNPLIELKSLRPSPKHELCSYIVCESKRVVDNSELLLREFNGRL 300
           WKHVQPAREMCSKYSITNPLIELKSLRPSPKHELCSYIVCESKRVVDNSELLLREFNGRL
Sbjct: 241 WKHVQPAREMCSKYSITNPLIELKSLRPSPKHELCSYIVCESKRVVDNSELLLREFNGRL 297

Query: 301 QT 302
           QT
Sbjct: 301 QT 297

[Close]

BLAST of Cp4.1LG02g08780 vs. NCBI nr
Match: KAG6607651.1 (hypothetical protein SDJN03_00993, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037253.1 hypothetical protein SDJN02_00876, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 605 bits (1560), Expect = 2.74e-218
Identity = 296/303 (97.69%), Postives = 298/303 (98.35%), Query Frame = 0


Query: 1   MFNCKNIFARTQTIRNWSRCNFNSASSSSSSSSSSSSS-FKFETGNYYSVLQSSSFQHWF 60
           MFNCKNIFARTQTIRNWSRCNFNSASSSSSSSSSSSSS FKFETGNYYSVLQSSSFQHWF
Sbjct: 1   MFNCKNIFARTQTIRNWSRCNFNSASSSSSSSSSSSSSSFKFETGNYYSVLQSSSFQHWF 60

Query: 61  KNWKELRKHKLTASTFAGAIGFWPRRRAQLWLEKLGAIDQFSGNLATCWSNMKEEEALER 120
           KNWKELRKHKLTASTFAGAIGFWPRRRAQLWLEKLGAIDQFSGNLATCWSNMKEEEALER
Sbjct: 61  KNWKELRKHKLTASTFAGAIGFWPRRRAQLWLEKLGAIDQFSGNLATCWSNMKEEEALER 120

Query: 121 YKLITGNSVLFPEFQVYEKGNSEYDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFDGDMA 180
           YKLITGNSVLFPEFQVY KGNSE DWLAASPDGAIDKMVYGLPSRGVLEIKCPFFDGDM 
Sbjct: 121 YKLITGNSVLFPEFQVYGKGNSECDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFDGDMG 180

Query: 181 KASPWSRVPLYCIPQAQGLMEIMDRDWMDFYVWTPKGSSLFRLYRDAEYWEVLKIALYDF 240
           +ASPWSRVPLYCIPQAQGLMEIMDRDWMDFYVWTPKGSSLFRLYRDAEYWEVLKIAL DF
Sbjct: 181 RASPWSRVPLYCIPQAQGLMEIMDRDWMDFYVWTPKGSSLFRLYRDAEYWEVLKIALSDF 240

Query: 241 WWKHVQPAREMCSKYSITNPLIELKSLRPSPKHELCSYIVCESKRVVDNSELLLREFNGR 300
           WWKHVQPAREMCSKYSITNPL+ELKSLRPSPKHELCSYIVCESKRVVDNSELLLREFNGR
Sbjct: 241 WWKHVQPAREMCSKYSITNPLVELKSLRPSPKHELCSYIVCESKRVVDNSELLLREFNGR 300

Query: 301 LQT 302
           LQT
Sbjct: 301 LQT 303

[Close]

BLAST of Cp4.1LG02g08780 vs. NCBI nr
Match: XP_022981568.1 (uncharacterized protein LOC111480647 [Cucurbita maxima])

HSP 1 Score: 600 bits (1548), Expect = 1.37e-216
Identity = 291/302 (96.36%), Postives = 291/302 (96.36%), Query Frame = 0


Query: 1   MFNCKNIFARTQTIRNWSRCNFNSASSSSSSSSSSSSSFKFETGNYYSVLQSSSFQHWFK 60
           MFNCKNIFARTQTIRNWSRCNFNSASSSSSS       FKFETGNYYSVLQSSSFQHWFK
Sbjct: 1   MFNCKNIFARTQTIRNWSRCNFNSASSSSSS-------FKFETGNYYSVLQSSSFQHWFK 60

Query: 61  NWKELRKHKLTASTFAGAIGFWPRRRAQLWLEKLGAIDQFSGNLATCWSNMKEEEALERY 120
           NWKELRKHKLTASTFAGAIGFWPRRRAQLWLEKLGAIDQFSGNLATCWSNMKEEEALERY
Sbjct: 61  NWKELRKHKLTASTFAGAIGFWPRRRAQLWLEKLGAIDQFSGNLATCWSNMKEEEALERY 120

Query: 121 KLITGNSVLFPEFQVYEKGNSEYDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFDGDMAK 180
           KLITGNSVLFPEFQVY KGNSEYDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFDGDM K
Sbjct: 121 KLITGNSVLFPEFQVYGKGNSEYDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFDGDMEK 180

Query: 181 ASPWSRVPLYCIPQAQGLMEIMDRDWMDFYVWTPKGSSLFRLYRDAEYWEVLKIALYDFW 240
           ASPWSRVPLYCIPQ QGLMEIMDRDWMDFYVWTPKGSSLFRLYRDAEYWEVLKIAL DFW
Sbjct: 181 ASPWSRVPLYCIPQVQGLMEIMDRDWMDFYVWTPKGSSLFRLYRDAEYWEVLKIALSDFW 240

Query: 241 WKHVQPAREMCSKYSITNPLIELKSLRPSPKHELCSYIVCESKRVVDNSELLLREFNGRL 300
           WKHVQPAREMCSKYSITNPLIELKSLRPSPKHELCSYIVCESKRVVDNSELLLREFNGRL
Sbjct: 241 WKHVQPAREMCSKYSITNPLIELKSLRPSPKHELCSYIVCESKRVVDNSELLLREFNGRL 295

Query: 301 QT 302
           QT
Sbjct: 301 QT 295

[Close]

BLAST of Cp4.1LG02g08780 vs. NCBI nr
Match: XP_038900094.1 (uncharacterized protein LOC120087241 [Benincasa hispida] >XP_038900095.1 uncharacterized protein LOC120087241 [Benincasa hispida])

HSP 1 Score: 550 bits (1416), Expect = 1.75e-196
Identity = 265/301 (88.04%), Postives = 276/301 (91.69%), Query Frame = 0


Query: 1   MFNCKNIFARTQTIRNWSRCNFNSASSSSSSSSSSSSSFKFETGNYYSVLQSSSFQHWFK 60
           MFNCK IFA +Q I NWS  NFNSA+SSS+         KFETGN+YS+LQSSSFQHWFK
Sbjct: 1   MFNCKKIFACSQAIGNWSIRNFNSAASSSA--------LKFETGNHYSILQSSSFQHWFK 60

Query: 61  NWKELRKHKLTASTFAGAIGFWPRRRAQLWLEKLGAIDQFSGNLATCWSNMKEEEALERY 120
           NW ELRKHKLTASTFAGAIGFWPRRRAQLWLEKLGAIDQF GNLATCWSNMKEEEALERY
Sbjct: 61  NWNELRKHKLTASTFAGAIGFWPRRRAQLWLEKLGAIDQFCGNLATCWSNMKEEEALERY 120

Query: 121 KLITGNSVLFPEFQVYEKGNSEYDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFDGDMAK 180
           KLITGNSVLFPEFQVY K NS  DWLAASPDGAIDKM+YGLPSRGVLEIKCPFFDGDM K
Sbjct: 121 KLITGNSVLFPEFQVYGKANSVDDWLAASPDGAIDKMIYGLPSRGVLEIKCPFFDGDMRK 180

Query: 181 ASPWSRVPLYCIPQAQGLMEIMDRDWMDFYVWTPKGSSLFRLYRDAEYWEVLKIALYDFW 240
           ASPWSR+PLYCIPQAQGLMEIMDRDWMDFYVWTPKGSSLFRLYRD EYW+VLKIAL DFW
Sbjct: 181 ASPWSRIPLYCIPQAQGLMEIMDRDWMDFYVWTPKGSSLFRLYRDVEYWDVLKIALSDFW 240

Query: 241 WKHVQPAREMCSKYSITNPLIELKSLRPSPKHELCSYIVCESKRVVDNSELLLREFNGRL 300
           WKHVQPAREMCSKY+I NPLIELKSLRPSPKHELCSYIVCESKRVVDNS+LLLREF+GRL
Sbjct: 241 WKHVQPAREMCSKYAINNPLIELKSLRPSPKHELCSYIVCESKRVVDNSKLLLREFDGRL 293

[Close]

BLAST of Cp4.1LG02g08780 vs. ExPASy TrEMBL
Match: A0A6J1EKA9 (uncharacterized protein LOC111433377 OS=Cucurbita moschata OX=3662 GN=LOC111433377 PE=4 SV=1)

HSP 1 Score: 607 bits (1566), Expect = 1.29e-219
Identity = 295/302 (97.68%), Postives = 295/302 (97.68%), Query Frame = 0


Query: 1   MFNCKNIFARTQTIRNWSRCNFNSASSSSSSSSSSSSSFKFETGNYYSVLQSSSFQHWFK 60
           MFNCKNIFARTQTIRNWSRCNFNSASSSSSSSS     FKFETGNYYSVLQSSSFQHWFK
Sbjct: 1   MFNCKNIFARTQTIRNWSRCNFNSASSSSSSSS-----FKFETGNYYSVLQSSSFQHWFK 60

Query: 61  NWKELRKHKLTASTFAGAIGFWPRRRAQLWLEKLGAIDQFSGNLATCWSNMKEEEALERY 120
           NWKE RKHKLTASTFAGAIGFWPRRRAQLWLEKLGAIDQFSGNLATCWSNMKEEEALERY
Sbjct: 61  NWKEFRKHKLTASTFAGAIGFWPRRRAQLWLEKLGAIDQFSGNLATCWSNMKEEEALERY 120

Query: 121 KLITGNSVLFPEFQVYEKGNSEYDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFDGDMAK 180
           KLITGNSVLFPEFQVYEKGNSEYDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFDGDMAK
Sbjct: 121 KLITGNSVLFPEFQVYEKGNSEYDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFDGDMAK 180

Query: 181 ASPWSRVPLYCIPQAQGLMEIMDRDWMDFYVWTPKGSSLFRLYRDAEYWEVLKIALYDFW 240
           ASPWSRVPLYCIPQAQGLMEIMDRDWMDFYVWTPKGSSLFRLYRDAEYWEVLKIAL DFW
Sbjct: 181 ASPWSRVPLYCIPQAQGLMEIMDRDWMDFYVWTPKGSSLFRLYRDAEYWEVLKIALSDFW 240

Query: 241 WKHVQPAREMCSKYSITNPLIELKSLRPSPKHELCSYIVCESKRVVDNSELLLREFNGRL 300
           WKHVQPAREMCSKYSITNPLIELKSLRPSPKHELCSYIVCESKRVVDNSELLLREFNGRL
Sbjct: 241 WKHVQPAREMCSKYSITNPLIELKSLRPSPKHELCSYIVCESKRVVDNSELLLREFNGRL 297

Query: 301 QT 302
           QT
Sbjct: 301 QT 297

[Close]

BLAST of Cp4.1LG02g08780 vs. ExPASy TrEMBL
Match: A0A6J1J2F9 (uncharacterized protein LOC111480647 OS=Cucurbita maxima OX=3661 GN=LOC111480647 PE=4 SV=1)

HSP 1 Score: 600 bits (1548), Expect = 6.64e-217
Identity = 291/302 (96.36%), Postives = 291/302 (96.36%), Query Frame = 0


Query: 1   MFNCKNIFARTQTIRNWSRCNFNSASSSSSSSSSSSSSFKFETGNYYSVLQSSSFQHWFK 60
           MFNCKNIFARTQTIRNWSRCNFNSASSSSSS       FKFETGNYYSVLQSSSFQHWFK
Sbjct: 1   MFNCKNIFARTQTIRNWSRCNFNSASSSSSS-------FKFETGNYYSVLQSSSFQHWFK 60

Query: 61  NWKELRKHKLTASTFAGAIGFWPRRRAQLWLEKLGAIDQFSGNLATCWSNMKEEEALERY 120
           NWKELRKHKLTASTFAGAIGFWPRRRAQLWLEKLGAIDQFSGNLATCWSNMKEEEALERY
Sbjct: 61  NWKELRKHKLTASTFAGAIGFWPRRRAQLWLEKLGAIDQFSGNLATCWSNMKEEEALERY 120

Query: 121 KLITGNSVLFPEFQVYEKGNSEYDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFDGDMAK 180
           KLITGNSVLFPEFQVY KGNSEYDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFDGDM K
Sbjct: 121 KLITGNSVLFPEFQVYGKGNSEYDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFDGDMEK 180

Query: 181 ASPWSRVPLYCIPQAQGLMEIMDRDWMDFYVWTPKGSSLFRLYRDAEYWEVLKIALYDFW 240
           ASPWSRVPLYCIPQ QGLMEIMDRDWMDFYVWTPKGSSLFRLYRDAEYWEVLKIAL DFW
Sbjct: 181 ASPWSRVPLYCIPQVQGLMEIMDRDWMDFYVWTPKGSSLFRLYRDAEYWEVLKIALSDFW 240

Query: 241 WKHVQPAREMCSKYSITNPLIELKSLRPSPKHELCSYIVCESKRVVDNSELLLREFNGRL 300
           WKHVQPAREMCSKYSITNPLIELKSLRPSPKHELCSYIVCESKRVVDNSELLLREFNGRL
Sbjct: 241 WKHVQPAREMCSKYSITNPLIELKSLRPSPKHELCSYIVCESKRVVDNSELLLREFNGRL 295

Query: 301 QT 302
           QT
Sbjct: 301 QT 295

[Close]

BLAST of Cp4.1LG02g08780 vs. ExPASy TrEMBL
Match: A0A0A0K4T5 (YqaJ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G302370 PE=4 SV=1)

HSP 1 Score: 529 bits (1363), Expect = 1.35e-188
Identity = 260/303 (85.81%), Postives = 272/303 (89.77%), Query Frame = 0


Query: 1   MFNCKNI-FARTQTIRNWSRCNFNSASSSSSSSSSSSSSFKFETGNYYSVLQSSSFQHWF 60
           MFNCK I FA +Q I N S  NFNS SSSS          +FET N+YSVLQS+SFQHWF
Sbjct: 9   MFNCKKILFACSQAIGNCSIRNFNSVSSSS---------LQFETVNHYSVLQSTSFQHWF 68

Query: 61  KNWKELRKHKLTASTFAGAIGFWPRRRAQLWLEKLGAIDQFSGNLATCWSNMKEEEALER 120
           KNW+ELRKHKLTASTFAGAIGFWPRRR QLWLEKLGAIDQF GNLATCWSNMKEEEALER
Sbjct: 69  KNWQELRKHKLTASTFAGAIGFWPRRRTQLWLEKLGAIDQFCGNLATCWSNMKEEEALER 128

Query: 121 YKLITGNSVLFPEFQVYEKGNSEYDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFDGDMA 180
           YKLITGNSVLFPEFQVY K NSE DWLAASPDGAIDKMVYGLPSRGVLEIKCPFF+GDM 
Sbjct: 129 YKLITGNSVLFPEFQVYGKANSEDDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFNGDMR 188

Query: 181 KASPWSRVPLYCIPQAQGLMEIMDRDWMDFYVWTPKGSSLFRLYRDAEYWEVLKIALYDF 240
            ASPWSRVPLYCIPQAQGLMEIMDRDWMDFYVWTP GSSLFRLYRD EYW+VLKIAL DF
Sbjct: 189 NASPWSRVPLYCIPQAQGLMEIMDRDWMDFYVWTPNGSSLFRLYRDVEYWDVLKIALSDF 248

Query: 241 WWKHVQPAREMCSKYSITNPLIELKSLRPSPKHELCSYIVCESKRVVDNSELLLREFNGR 300
           WWKHVQPAREMCSKY +TNPLIELKSLRPSP+HELCSYIVCESKRVV+NS+LLLREF+GR
Sbjct: 249 WWKHVQPAREMCSKYVVTNPLIELKSLRPSPRHELCSYIVCESKRVVNNSKLLLREFDGR 302

Query: 301 LQT 302
           LQT
Sbjct: 309 LQT 302

[Close]

BLAST of Cp4.1LG02g08780 vs. ExPASy TrEMBL
Match: A0A0A0KG47 (YqaJ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G405910 PE=4 SV=1)

HSP 1 Score: 522 bits (1344), Expect = 7.93e-186
Identity = 257/303 (84.82%), Postives = 269/303 (88.78%), Query Frame = 0


Query: 1   MFNCKNI-FARTQTIRNWSRCNFNSASSSSSSSSSSSSSFKFETGNYYSVLQSSSFQHWF 60
           MFN K I FA +Q I N S  NFNS S SS          +FETGN+YSVLQSSSFQHWF
Sbjct: 1   MFNSKKILFACSQAIGNCSLRNFNSVSFSS---------LQFETGNHYSVLQSSSFQHWF 60

Query: 61  KNWKELRKHKLTASTFAGAIGFWPRRRAQLWLEKLGAIDQFSGNLATCWSNMKEEEALER 120
           KNW+ELRKHKLTASTFAGAIGFWPRRR QLWLEKLGAIDQF GNLATCWSNMKEEEALER
Sbjct: 61  KNWQELRKHKLTASTFAGAIGFWPRRRTQLWLEKLGAIDQFCGNLATCWSNMKEEEALER 120

Query: 121 YKLITGNSVLFPEFQVYEKGNSEYDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFDGDMA 180
           YKLITGNSVLFPEFQVY K NSE DWLAASPDGAIDKMVYGLPSRGVLEIKCPFF+GD+ 
Sbjct: 121 YKLITGNSVLFPEFQVYGKANSEDDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFNGDLR 180

Query: 181 KASPWSRVPLYCIPQAQGLMEIMDRDWMDFYVWTPKGSSLFRLYRDAEYWEVLKIALYDF 240
            A PWSRVP YCIPQAQGLMEIMDRDWMDFYVWTP GSSLFRLYRD EYW+VLKIAL DF
Sbjct: 181 NALPWSRVPRYCIPQAQGLMEIMDRDWMDFYVWTPNGSSLFRLYRDPEYWDVLKIALSDF 240

Query: 241 WWKHVQPAREMCSKYSITNPLIELKSLRPSPKHELCSYIVCESKRVVDNSELLLREFNGR 300
           WWKHVQPAREMCSKY ITNPL+ELKSLRPSP+HELCSYIVCESKRVV+NS+LLLREF+GR
Sbjct: 241 WWKHVQPAREMCSKYVITNPLVELKSLRPSPRHELCSYIVCESKRVVNNSKLLLREFDGR 294

Query: 301 LQT 302
           LQT
Sbjct: 301 LQT 294

[Close]

BLAST of Cp4.1LG02g08780 vs. ExPASy TrEMBL
Match: A0A1S3C4M6 (uncharacterized protein LOC103496427 OS=Cucumis melo OX=3656 GN=LOC103496427 PE=4 SV=1)

HSP 1 Score: 517 bits (1332), Expect = 5.34e-184
Identity = 255/303 (84.16%), Postives = 269/303 (88.78%), Query Frame = 0


Query: 1   MFNCKNI-FARTQTIRNWSRCNFNSASSSSSSSSSSSSSFKFETGNYYSVLQSSSFQHWF 60
           MFN K I FA +Q I N S  NFNS S SS          +FETGN+YSVLQSSSFQHWF
Sbjct: 1   MFNSKKILFACSQAIGNCSIRNFNSVSFSS---------LQFETGNHYSVLQSSSFQHWF 60

Query: 61  KNWKELRKHKLTASTFAGAIGFWPRRRAQLWLEKLGAIDQFSGNLATCWSNMKEEEALER 120
           KNW+ELRKHKLTASTFAGAIGFWPRRRAQLWLEKLGAI+ F GNLATCWSNMKEEEALER
Sbjct: 61  KNWQELRKHKLTASTFAGAIGFWPRRRAQLWLEKLGAIEPFCGNLATCWSNMKEEEALER 120

Query: 121 YKLITGNSVLFPEFQVYEKGNSEYDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFDGDMA 180
           YKLITGNSVLFPEFQVY K NSE DWLAASPDGAIDKMVYGLPSRGVLEIKCPFF+GDM 
Sbjct: 121 YKLITGNSVLFPEFQVYGKANSEDDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFNGDMR 180

Query: 181 KASPWSRVPLYCIPQAQGLMEIMDRDWMDFYVWTPKGSSLFRLYRDAEYWEVLKIALYDF 240
            ASPWS+VP YCIPQAQGLMEIMDRDWMDFYVWTP GSSLFRLYRD EYW+VLKIAL DF
Sbjct: 181 NASPWSQVPRYCIPQAQGLMEIMDRDWMDFYVWTPNGSSLFRLYRDPEYWDVLKIALSDF 240

Query: 241 WWKHVQPAREMCSKYSITNPLIELKSLRPSPKHELCSYIVCESKRVVDNSELLLREFNGR 300
           WWKHVQPARE+CSKY ITNPLIELKS RPSP+HELCSYIVCES+RVV+NS+LLLREF+GR
Sbjct: 241 WWKHVQPAREICSKYVITNPLIELKSFRPSPRHELCSYIVCESRRVVNNSKLLLREFDGR 294

Query: 301 LQT 302
           LQT
Sbjct: 301 LQT 294

[Close]

BLAST of Cp4.1LG02g08780 vs. TAIR 10
Match: AT1G13810.1 (Restriction endonuclease, type II-like superfamily protein )

HSP 1 Score: 278.1 bits (710), Expect = 8.4e-75
Identity = 129/254 (50.79%), Postives = 171/254 (67.32%), Query Frame = 0


Query: 48  SVLQSSSFQHWFKNWKELRKHKLTASTFAGAIGFWPRRRAQLWLEKLGAIDQFSGNLATC 107
           +V+ +    HW KNW++LRK++LTAS FA AIGF P  R  LWLEK+GA   F+GN AT 
Sbjct: 48  AVVVTEPTHHWRKNWEDLRKNRLTASNFARAIGFSPDGRRNLWLEKIGAAKPFAGNRATF 107

Query: 108 WSNMKEEEALERYKLITGNSVLFPEFQVYEKGNS-EYDWLAASPDGAIDKMVYGLPSRGV 167
           W    E EALERY  +TGN +L PEF VY+ G S E +WL ASPDG I+ +  G+ S GV
Sbjct: 108 WDIENEVEALERYNELTGNEILIPEFVVYKNGESPEENWLGASPDGVINVVKDGVTSCGV 167

Query: 168 LEIKCPFFDGDMAKASPWSRVPLYCIPQAQGLMEIMDRDWMDFYVWTPKGSSLFRLYRDA 227
           LE+KCPF + D +K  PW +VP  C+PQ QGLMEI+D DW+D Y WT  GSSLFR++RD 
Sbjct: 168 LEVKCPFDNRDNSKVYPWKKVPYNCVPQLQGLMEIVDTDWLDLYCWTRNGSSLFRVWRDT 227

Query: 228 EYWEVLKIALYDFWWKHVQPAREMCSKYSITNPLIELKSLRPSPKHELCSYIVCESKRVV 287
            +WE +K AL+DFW  HV PARE+ + + I +P ++L+  +P   HE C  I+  ++R+ 
Sbjct: 228 AFWEDMKPALFDFWQNHVLPAREIYNNFDIKDPQVKLREFKPKHWHEDCKKIMRGAERIS 287

Query: 288 DNSELLLREFNGRL 301
            N+  L  E +G L
Sbjct: 288 ANANRLFYEIDGNL 301

[Close]

BLAST of Cp4.1LG02g08780 vs. TAIR 10
Match: AT1G67660.1 (Restriction endonuclease, type II-like superfamily protein )

HSP 1 Score: 178.7 bits (452), Expect = 6.9e-45
Identity = 105/283 (37.10%), Postives = 148/283 (52.30%), Query Frame = 0


Query: 18  SRCNFNSASSSSSSSSSSSSSFKFETGNYYSVLQSSSFQHWFKNWKELRKHKLTASTFAG 77
           SR  F+S + S  + + S  +    +    S+L  S      + W  LRK KLT STF+ 
Sbjct: 77  SRKRFSSTALSLITQTISPFAHPRSSVIVSSLLSPSDIPQKSEEWFALRKDKLTTSTFST 136

Query: 78  AIGFWP-RRRAQLWLEKL----GAIDQFSGNLATCWSNMKEEEALERYKLITGNSVLFPE 137
           A+GFW   RRA+LW EK+      + + S   A  W    E  A+ERYK I G  V    
Sbjct: 137 ALGFWKGNRRAELWHEKVYDSDARVVEESARFAMNWGVQMESSAIERYKRIMGCEVGTMG 196

Query: 138 FQVYEKGNSEYDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFDGDMAKASPWSRVPLYCI 197
           F ++   N E+ WL ASPDG +D         G+LE+KCP+  G      PW +VP Y +
Sbjct: 197 FAIH--SNEEFHWLGASPDGILDCF-------GILEVKCPYNKGKTETVLPWKKVPYYYM 256

Query: 198 PQAQGLMEIMDRDWMDFYVWTPKGSSLFRLYRDAEYWEVLKIALYDFWWKHVQPAREMCS 257
           PQ QG MEIMDR+W++ Y WT  GS++FR+ RD  YW ++   L +FWW+ V PARE   
Sbjct: 257 PQLQGQMEIMDREWVNLYCWTRNGSTVFRVMRDRSYWRIIHDVLREFWWESVIPARE--- 316

Query: 258 KYSITNPLIELKSLRPSPKHELCSYIVCESKRVVDNSELLLRE 296
              +     E+K   P+  H+     + +S  +   S+L+ RE
Sbjct: 317 ALLLGKEDEEVKKYEPTSTHKRTKLAIAKSLNLAAESKLVCRE 347

[Close]

BLAST of Cp4.1LG02g08780 vs. TAIR 10
Match: AT1G67660.2 (Restriction endonuclease, type II-like superfamily protein )

HSP 1 Score: 178.7 bits (452), Expect = 6.9e-45
Identity = 105/283 (37.10%), Postives = 148/283 (52.30%), Query Frame = 0


Query: 18  SRCNFNSASSSSSSSSSSSSSFKFETGNYYSVLQSSSFQHWFKNWKELRKHKLTASTFAG 77
           SR  F+S + S  + + S  +    +    S+L  S      + W  LRK KLT STF+ 
Sbjct: 27  SRKRFSSTALSLITQTISPFAHPRSSVIVSSLLSPSDIPQKSEEWFALRKDKLTTSTFST 86

Query: 78  AIGFWP-RRRAQLWLEKL----GAIDQFSGNLATCWSNMKEEEALERYKLITGNSVLFPE 137
           A+GFW   RRA+LW EK+      + + S   A  W    E  A+ERYK I G  V    
Sbjct: 87  ALGFWKGNRRAELWHEKVYDSDARVVEESARFAMNWGVQMESSAIERYKRIMGCEVGTMG 146

Query: 138 FQVYEKGNSEYDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFDGDMAKASPWSRVPLYCI 197
           F ++   N E+ WL ASPDG +D         G+LE+KCP+  G      PW +VP Y +
Sbjct: 147 FAIH--SNEEFHWLGASPDGILDCF-------GILEVKCPYNKGKTETVLPWKKVPYYYM 206

Query: 198 PQAQGLMEIMDRDWMDFYVWTPKGSSLFRLYRDAEYWEVLKIALYDFWWKHVQPAREMCS 257
           PQ QG MEIMDR+W++ Y WT  GS++FR+ RD  YW ++   L +FWW+ V PARE   
Sbjct: 207 PQLQGQMEIMDREWVNLYCWTRNGSTVFRVMRDRSYWRIIHDVLREFWWESVIPARE--- 266

Query: 258 KYSITNPLIELKSLRPSPKHELCSYIVCESKRVVDNSELLLRE 296
              +     E+K   P+  H+     + +S  +   S+L+ RE
Sbjct: 267 ALLLGKEDEEVKKYEPTSTHKRTKLAIAKSLNLAAESKLVCRE 297

[Close]

BLAST of Cp4.1LG02g08780 vs. TAIR 10
Match: AT1G67660.3 (Restriction endonuclease, type II-like superfamily protein )

HSP 1 Score: 178.7 bits (452), Expect = 6.9e-45
Identity = 105/283 (37.10%), Postives = 148/283 (52.30%), Query Frame = 0


Query: 18  SRCNFNSASSSSSSSSSSSSSFKFETGNYYSVLQSSSFQHWFKNWKELRKHKLTASTFAG 77
           SR  F+S + S  + + S  +    +    S+L  S      + W  LRK KLT STF+ 
Sbjct: 56  SRKRFSSTALSLITQTISPFAHPRSSVIVSSLLSPSDIPQKSEEWFALRKDKLTTSTFST 115

Query: 78  AIGFWP-RRRAQLWLEKL----GAIDQFSGNLATCWSNMKEEEALERYKLITGNSVLFPE 137
           A+GFW   RRA+LW EK+      + + S   A  W    E  A+ERYK I G  V    
Sbjct: 116 ALGFWKGNRRAELWHEKVYDSDARVVEESARFAMNWGVQMESSAIERYKRIMGCEVGTMG 175

Query: 138 FQVYEKGNSEYDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFDGDMAKASPWSRVPLYCI 197
           F ++   N E+ WL ASPDG +D         G+LE+KCP+  G      PW +VP Y +
Sbjct: 176 FAIH--SNEEFHWLGASPDGILDCF-------GILEVKCPYNKGKTETVLPWKKVPYYYM 235

Query: 198 PQAQGLMEIMDRDWMDFYVWTPKGSSLFRLYRDAEYWEVLKIALYDFWWKHVQPAREMCS 257
           PQ QG MEIMDR+W++ Y WT  GS++FR+ RD  YW ++   L +FWW+ V PARE   
Sbjct: 236 PQLQGQMEIMDREWVNLYCWTRNGSTVFRVMRDRSYWRIIHDVLREFWWESVIPARE--- 295

Query: 258 KYSITNPLIELKSLRPSPKHELCSYIVCESKRVVDNSELLLRE 296
              +     E+K   P+  H+     + +S  +   S+L+ RE
Sbjct: 296 ALLLGKEDEEVKKYEPTSTHKRTKLAIAKSLNLAAESKLVCRE 326

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g08780 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG02g08780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023522491.1	3.63e-225	100.00	uncharacterized protein LOC111786473 [Cucurbita pepo subsp. pepo]	[more]
XP_022926185.1	2.66e-219	97.68	uncharacterized protein LOC111433377 [Cucurbita moschata] >XP_022926187.1 unchar...	[more]
KAG6607651.1	2.74e-218	97.69	hypothetical protein SDJN03_00993, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022981568.1	1.37e-216	96.36	uncharacterized protein LOC111480647 [Cucurbita maxima]	[more]
XP_038900094.1	1.75e-196	88.04	uncharacterized protein LOC120087241 [Benincasa hispida] >XP_038900095.1 unchara...	[more]

BLAST of Cp4.1LG02g08780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EKA9	1.29e-219	97.68	uncharacterized protein LOC111433377 OS=Cucurbita moschata OX=3662 GN=LOC1114333...	[more]
A0A6J1J2F9	6.64e-217	96.36	uncharacterized protein LOC111480647 OS=Cucurbita maxima OX=3661 GN=LOC111480647...	[more]
A0A0A0K4T5	1.35e-188	85.81	YqaJ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G302370 PE=4 S...	[more]
A0A0A0KG47	7.93e-186	84.82	YqaJ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G405910 PE=4 S...	[more]
A0A1S3C4M6	5.34e-184	84.16	uncharacterized protein LOC103496427 OS=Cucumis melo OX=3656 GN=LOC103496427 PE=...	[more]

BLAST of Cp4.1LG02g08780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G13810.1	8.4e-75	50.79	Restriction endonuclease, type II-like superfamily protein	[more]
AT1G67660.1	6.9e-45	37.10	Restriction endonuclease, type II-like superfamily protein	[more]
AT1G67660.2	6.9e-45	37.10	Restriction endonuclease, type II-like superfamily protein	[more]
AT1G67660.3	6.9e-45	37.10	Restriction endonuclease, type II-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011604	Exonuclease, phage-type/RecB, C-terminal	GENE3D	3.90.320.10		coord: 59..260 e-value: 2.1E-42 score: 147.1
IPR019080	YqaJ viral recombinase	PFAM	PF09588	YqaJ	coord: 61..203 e-value: 1.7E-16 score: 60.7
None	No IPR available	PANTHER	PTHR46609	EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN	coord: 30..301
None	No IPR available	PANTHER	PTHR46609:SF4	RESTRICTION ENDONUCLEASE, TYPE II-LIKE SUPERFAMILY PROTEIN	coord: 30..301
IPR011335	Restriction endonuclease type II-like	SUPERFAMILY	52980	Restriction endonuclease-like	coord: 46..251

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG02g08780.1	Cp4.1LG02g08780.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
molecular_function	GO:0004519	endonuclease activity