Cp4.1LG02g08670 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG02g08670
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Localized to the inner membrane of the chloroplast
Location	Cp4.1LG02: 128035 .. 136358 (+)
RNA-Seq Expression	Cp4.1LG02g08670
Synteny	Cp4.1LG02g08670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGGATTGACATCAGATCACAGGGCAGCAAAAAAGAGCTCAAGGGATTATCGTGATCGCAAAGCACGGAATAATTTCCTCAAGGCCATCGATATTATCGAACAAGAAAAATATTTTCCTAGTAATAATCTGTTTCCCGTTTCCCGTTTCCACGTTCACCTCCAAACCAAAACCGCACTCTCTCGCTATCTTCTGTTCATCTTTGGGACTCAACACAACGATGTCTGCTATATCCAATTCGTTGATTTTAACGAAAACCCCTCAACTCCAGTTATCAGCTGGTAATCCTCACTCTCTGATTTCTTCAGCATTTGATCTTGTGTTAGATTTTCGTTGTTAAGTACACAAGCTCCCCATTTGTTATTTCTTATCCTGTATTTTTTTTCTTGTATCGATTCAATTTTAGCTGTTGCTCTTGAGTTTCCTTTCCAATTTACACATCTTAGTAACACTTCTCTCTCCGGTTTAATTTTGGGGATGATCTTGTAGTGCGGGAGATTTAGGACTTGTGTTCTCGATTTTTCCATCGCGAAATGCCCTCATTTCCATCGGTAGATATCGGGTTTTCTTCTAATTTGTATATTGAGTTACAGCGAGCTTCAAATGTTAGTTACCTGCTACTTTTGACCATCCTCTTAGCTCATAAATCGGTTTTGTGTTCTATGTAGAAACGGCCTTTTCTAGGCGAAATTTGCGAGGGGAATGTGTATTTTCCTCCATTTTGGTTCCGTTTATGGTGGGCTGTTTATTCTTTCTTGATGATGTCTAAAGGCGCTATTAATCTTATCGTTTTTATTACATCGTGATGATGTCTTGATTTCCAAATTAATGAAATTTTTTGTAATTGTTGGAAGATTGAATTATGACTAGTAGGTAGTTGCTCTTATTTTCATAATTGGGAAGAACTAAGGAGAGTGCACATGTATGTAACCATAAATTGTATTTGTCTAAGTGTACTCTCGCCAATTTTCCTGCCAGGATCAAATCTGAAAACTGCTGATAAACGATTTGGGAGTGTCTCCCCTACCCGCTTGTTACTCAATCCTGGTTGGGTGGGAAAGGCCAAGCTTTCTACATTTAGGCGGCCACTTTCAGTTCAAGCTGCATATAGGTATAATCTTTGAAATCACTACTAAAACAATATGCCATTTAGTCATCTCATATTATAGCATTACAGTCTAGGGAGTCTATTTTTTGAAGAAATTATTATCGATCACTACGTTGAGAAACTATTTACGTGGTAGGAATGCATGTTTAGAATCTTTGTGTGGGTAGGCTTATCATTGGGGTGCACAATAACTGGAAAAGGAACTGCCGTGCTGAGCTGAACTGAATTTCTTAATCTCAGGTAGTCAACAACCATGAACATAACTAATTTTTAGCTGGTTCAAACAGATTTGCAACCAAAGGATGAGCCTGTTTGGTTTGCTATGCTCGAAACTGAGTCTCGTTGATTTGGTCAAAGACTGATCAAATCAACATAATGAAGGCATATAGGTTTCCTACCCAAAAGAAGGGGAAAAAATAATAATGAATGTATGTACTCATCCCATTTTAGATAACAAATTCAAATGAAACAGTTGTTGAATTTGATCTGTTTACTCTGTATGATTACGGTCTGGATTTGTGCCTCCCTATGAGATTTGGCCTTTTGCTCCTAAAATATTTTGGGGGATCAGTGTTTAGAGGCAAGGCCAACATTTTGTGGAATTGTAGTCCATTCTCTCCTTTGGTTAATTTGGAAGGAGAGAACAAATAGGATTTTTAAAGTCAAGGAGACTACGGTGGATTCTTTTTGTAATCGTGTACAACACTTAGCATTGTGGTGGTGTTCCAAACACACGAGCTTTTTTTTTGGTTGTAATTTTAGTCTTTTGATGATTACTAATGATTGGAAGGCTCCAATGGTCTATTTTCGTGAGGGGGATTTTTCTTCCCGCACTCAGGTTGTTTCTCTCTCTCAATCTGTCTATAAAGCATCATTCATCATCCCCAAGCCTAGATTGTTTCTCTATCTCTTTGTTTATAAAGCCTCATTTCTTATACCAAAAAATTACTAATTAATAAATAAACAATAACTCTTAGGGTTGAATAATGTCTAGTCTGTAACAATTGTTAATAAAGCTTTTCCGAGTGGAAACTAATAATAGTATTCCTATATGTTTCAAATGGACATAGCACAAGTTGATGTCTATTTTATTGTATATGTCTTGATGGGTCCGTCCTATATGCTTCATTTGAAATACTCTGACGGCAGTTTATTATGCACCTTGTGGCAGTGATGGTGGACGGTCAAGCAGTGCAGGCATTTTTATTGGAGGTTTTGTATTGGGAGGGCTCGTAGTTGGTACGCTTGGCTGTGTATATGCCCCTCAGGTTTTTAACTTTTTTCATCTCTTATCTAACCTCTAAATTGGACATATGGGAAATTTCACCTAGTATATCTGTTACTTGTGTGCTATGGTTACTATCTTAGGGAAGGTATGTAGAAATATGCACAACTATTGTCTCTGAGCTTCAAGTGCAGAATCCTCGTCTTGTTATGACTGAGAGTTGATCTTGTGTTTGAATTATAGATTAGCAAGGCACTTGCTGGAACAGACCGAAAAGATTTGATGAGGAAACTTCCCAAGTTCATATATGATGAAGAAAAAGCCTTAGAGGTGCAAAATCACTCATCTCTTTTTATTTGTTGCGAGTGATCTTGTGAATGAACATTTCATCTTCACTTGACATTCATTTACCCAATCGTGGATTTTATTCGTAACATTGCACTTTCTTCTTAAATACCATGAGTTGGCAGAATGATAATTGGAGCTTGGGAAAGAAAAGGGTTAAGAGGGAATGAGTTCAAATCATGTGGGCACCTACGTATGATTTTAAAATTCTGTTAGTTTTCTTGGCAACCACTTGAACTAGGATCAAGTAGTTGTCCCATGAGATAAGGTGGCTCGAACATTTGCAGATATAAAATAATAATAATAATAGTAATAAATATATATTTTTTCCAACCTTCATCAACTTCTCATCAAAGATGCTAAAATGTGTTCGTGTAACTTCAGTTTTGACAATTCTGCGTGGGGGTATTTGAATTTTGCATAAAATTTGTGTAGTATAAGGTCAAAAGAGTACATAAACTGGAATACGAATTTATATGTATGGATTTACTTATCCTGGGATACGAGTTTTCTAATTTATGGAGCACATAAACTCATATCACATGAATCTAAAACCTTAAATATCCCATCATCAATAATAGTGAAAATAANAAATATACAGATTACTGATTCAATTGCACAATTCAAATAAGCTTATCGACTAAATATCCCACTTTCATTTGGTTTTTGAGATATGGTTTGTCGGTATTTAGTTTAAAATATGACTATAATATGTTGTATGTATGTAGTCTAGAAGATTAGCAAGCTTGTGGATCAGGATAAGCAAATCTACACCCATCTAGATTATACAAAACTAATCTATGAACTAAACACAGGGCCCTTTCCAGTAGGATTTGTCTTAAATTTTTAGATAACAATATTTTGTTTTTGATTCTGGATTTTTTTCTTTTCAACTCTGAACTTTCTTTATAGAAGAAATACAATATTACGTGCTTTTCTTTAACAGTTCCTGTTCGGTTTTTGATGTGCGAACATGTACTTGCTTTTTATTGAAATTGCAGAAAACAAGAAAAGTGCTGGCACAGAAGATTGAACAGTTGAACTCTGCCATTGATGAGGTTTCTTCTCAGCTCCGCACAGAGGATTCCCCAAATGGAGTGGCCGTAAACTCTGATGAAGTTGAACCTGCCATTTGAAAGTATCGTTACCTTGGTTTTCACCGCCCACGATTCGGGGACTAAGAATAATAGTTAATTTTCTAGCTATTATCTTTGATTTTCTGTCTTAATACGTTTGGAACTGAACTTTGATGTGCATTACACATCATCGCGTAATGTGGTGCTATGATCACTCAGATGCTCCTTCTAAAGTTGAATAGTTTGTAGAAGAGCATTCTTGCTGTTTCCTACTTTGTAAACGAACAGCCATTGTTTTGTATTTGAAAATCACATATTTCATTCCTTCCTCTTATTTGCATTTTTTAACTTGTCTGGCAGTCTTAAGCCAAATGATCCCTTGTTGCTGGGGCGTCCATTTTGTCTTCCAGCTAAAAACTAAATCTTAACAGGGAAAAGCGAGGTAGCAAAGCTTAATATTTGGTTTTTGGCGAGATTCTGGAGATTACAGGGGAAGAAATAGTGGAACATTGGAGGAGAAAAAAACCAAAGAATGAAACGTTATTATTTAAGCAAAAGTCAGGTTGGATCGAGTGAAGGCACTGGCCAATGTCTTCTCTGTATTTGCTGTTCCAAGCCAAGGGCGAAAATGACGTGGATGGATAGGCTATGACTCATTAACTTGGAACAATGAGAGGCAGACATTAGAGAGGGAAACGTCGGTGACTTGTCAGACTGAACAGGTGCCAGCTTGGACTACTACCAACAATCCTCTTGTAACAACATATAGCTTGAGGGCATTATTGGAAAGTTACATAGGTGAAAGATCTGTGGTTCAGAGGCTTCCTGAAATTGATAGGCGAAAAAGACTGCCTTATCTTATGTATCTGCCCCTCGCAGCTTTCTCACCACAAAACACTCTCTAGATCACTTGATTGCAAGTTGCCACAGTCCTTCCATCTATGATTAAAAAAGGGCAGCTTCTGTATAACCCAAATGCCAATTTCAGAGTTCTACAATTGATATACATTTGTGAAGTGGAGTTACGTAGCCCCTGAGTTAGCAGCCATGGCCACTCACGCAGCTCTGGCTTCAACAAGGATCCCCACCAACACAAGGCTTCCTTCCAAGACTTCCAATTCTTTCCGACCTCGATGCTCATCCAAGGTTTGTCTCTTCATCTCTCAAACTACTTAATGGTAGCTGATACTTCATTAAATTGTCCTCATAATTTAGTTTTGAATTTGCAATGTGCAGAGGCTGGATGTTGCTGAGTTCAATGGGCTTAGATCTGCTTGCCTGACCTTCTCTAACAATGGCAGAGAAGGATCGCTCTTCGACGTCGTGGCTGCTCAACTGACTCCCAAGGTTCTTCCTTTTCCCTTCGTTTTGTGGTTTAAAATTCTAGATGATTTCATGGGATGAAAAGAGATCGCAGTAGTTTGAGAAATTTGATATAGTTTGAAGAAATCTATATGTTTGACTAATCTTAGTAATTATGAGTAACTCATCTTGATCGTGGTTCTTACTAACAGAATAGGAACATTTTCTTCATACAGGCAGTAGGATCATTTCCGGTTAGGGGAGAAACAGTGGCTAAACTCAAGGTGGCAATCAATGGATTTGGACGTATTGGCCGAAACTTCCTGCGGTGCTGGCATGGCAGGAAAGACTCGCCTCTCGATGTTGTCGTTGTCAACGACAGTGGTGGTGTCAAGAATGTAAGCAATATATATCTTCTCAATACATTGATCAAGTGCCATTTTCAAGGATTAATCTACTTGAACATAGTTAGCAAAAGTCTCGCCACTTAAGATGAATTATACCAAAAATTTCAGGCCTCCCACTTGCTAAAATATGATTCCATGCTGGGAACTTTCAAGGCAGAGGTGAAAATTGTAGACAATGAAACCATATCTGTTGATGGGAAGCCAATCAAGGTTGTCTCAGGCAGGGACCCCCTCAAGCTTCCTTGGGGCGAGTTAGGCATTGACATTGTTATTGAGGTAGATTTAAGTCCATCCCAATCAATTATCAGATTATCCGCCCCGATCAATACCAATATCCATGGCCTTCGCAGGGTACAGGAGTGTTCGTGGATGGCCCAGGGGCAGGGAAACACATCCAAGCAGGTGCAAAGAAGGTTCTCATCACTGCTCCTGCAAAAGGTGCTGATATTCCAACATATGTTGTTGGGGTAAACGAAAAAGATTACTACCATGATGTTGCTAACATCATTAGGTCAGTAACAGTTTCATTCTTGGAGCTGAATTTGTTTTGACCTTTGAGCTGCTAAGTAATTGTTTTTGGTTGGTTAGTAAGCTTCTGATTGTTGAAGTTTTTAGCTATTGCTCTTAAACTTTTATGCAGCAATGCTTCTTGCACCACCAATTGCCTTGCTCCTTTTGTGAAGATCATTGATGAGGAATTTGGTAGGCAATCAGTTTCATTTTGGGCAACGAGCATTGTTTCCCGATTTTAACCACTTGGTGTTTGATTGAATTCAGGCATTGTGAAGGGAACGATGACAACCACTCACTCCTACACTGGAGACCAGGTAAAGAAAATATATGAACAATTAATTACATTATGAATGTGTGTAGAATCCTATGGCATTGATGATTTTTGAGATAGAGGAAATCTTATAACCTCGAGTCACGTTTTGGGGGTTATGCAGAGACTTTTGGATGCATCACACCGTGACTTGAGACGAGCCAGGGCCGCAGCTTTGAACATTGTCCCCACAAGCACTGGTGCAGCAAAGGCCGTATCCCTTGTGCTGCCCCAGCTTAAGGGCAAGCTCAATGGTATTGCACTTCGTGTGCCTACTCCAAATGTTTCAGTTGTTGACCTCGTTGTGAACGTTGCGAAGAAAGGCATCTCCGCAGATGATGTCAATGCTGCCTTCAGAAAGGCAGCTGATGGACCATTGAAGGGCGTGCTAGCCGTGTGCGATATTCCTCTTGTTTCTGTGGACTTTAAGTGCACTGATGTTTCCTCCACAATTGACTCTTCATTAACAATGGTAATGGGAGATGATATGCTCAAGGTGGTCGCCTGGTACGACAATGAATGGGGATACAGGTGAGGACTTTCATTCATGGGAATGGATGATTGATTCCCTTCAACATTATAAACCAACGTATATGATGTTTCATTAACTTTTTGTTGTCTGCAGCCAAAGAGTTGTGGACTTGGCTCATTTGGTGGCAAGCAAATGGCCGGGAGTGGGATCGGGAACAAGTGGAGATCCGTTGGAGGATTTCTGCCAGACTAACCCAGCTGATGAAGAGTGCAAAGTTTATGAAGCTTAGGCATCATCATGTCTTTTGTTGGTTGCTTTGAGTCTAGGTCGTTTTTTAGCATTGCTGTACAATGCTTGTTTAGAATTCAAATTCAAGGAAGAGACTTTTTATCTATCCATTTGTAAAATTTGAAGACAGTGTTCTAAAGCTGCAATAACCTTTGAAAAGGGACAAAAATGAAGGAAAAACATGAACCACCCCCTTTACTACACCTTTTTCCCTCATATTTCCTCTGCAAATTAGTCCATTTTGTTCTTTTAGATGCTTTCCTCTGATTTCTTGTTCTAAACTTGAAGTGTACAAACTGGATTTAGACAGACTTAAATGTATTGATGAGGAGACGAAATTAATAAACCTGGCTGGTTGCTTCAATTTCTGTCTACAAACTTCTCAAGGATTTACCTCCAAATTACCATCATTCTTATCATTTTCGGACGATTTTTCAACTTTCCTTCGTTTGCTTTGCCTTGGTTCTTTCTTCTCATCAAACAACGACATGATTCGTCGAAGACGGTTCGGATGCGATCCACTACTGCTAGACAGATCAGATTCTTTTGAATCAGAATGGTATAGCTGACGAATAATCTGAAAGCAGTATATGGCAAGGGCAATGAAACACACTGTCCCACAGATAAGAAAGAGACCCCAGAAGCTCTTAAGTTGAAGCGAGTCTGATTCGAGATCTGTACTGTCTGAGGTGCAAGCACTTTTCACAACCCATTTGTCGTGTATCCGTTGCAGATCGCCGTTCTCGGATAGCTGCAAAATGGCAGTTGACATGTCTACAGCCAATGGAGAGTCTCGTGGGAATGCCTGAATTACCAAAAGGAGCAACAGGAGAATAGTTATTGATGTGTTCAATTTATCAAATACTAAATAAGAACGAAAACACTCACGAAACCCCAGCCGCTTTTGGTAAACTCTTGACCAACAACTCTGAATTTACACTCTCTAGAGATGAAATTTTCTACATATAGAAGTTCATCAACTACAGCAGCAACGCCTCCCTCCTTGCCAGGGCCAAGATCAAGTGCCTTGGCATATTCTTCCGGTGATCCAAGAGGAATAAGCCTAGATCTAGACACGTTCAGCTCCTCACTCAGATAACGTTCAGCAAAAGATCCAACTTGGAAACCAATCGGTTCATCAATTTCCCTCAAGGTTTCTATTCCTGTGATTGGAGAATATAGCTGCTGCACCGTGAGAATGGATGTTAAGCTTGCAGTGTAGCTAGAATTTATAATCAAAACCACAAACAGCCATATGATCAGCACGAAGCGGCCGAGA

mRNA sequence

TAGGATTGACATCAGATCACAGGGCAGCAAAAAAGAGCTCAAGGGATTATCGTGATCGCAAAGCACGGAATAATTTCCTCAAGGCCATCGATATTATCGAACAAGAAAAATATTTTCCTAGTAATAATCTGTTTCCCGTTTCCCGTTTCCACGTTCACCTCCAAACCAAAACCGCACTCTCTCGCTATCTTCTGTTCATCTTTGGGACTCAACACAACGATGTCTGCTATATCCAATTCGTTGATTTTAACGAAAACCCCTCAACTCCAGTTATCAGCTGGATCAAATCTGAAAACTGCTGATAAACGATTTGGGAGTGTCTCCCCTACCCGCTTGTTACTCAATCCTGGTTGGGTGGGAAAGGCCAAGCTTTCTACATTTAGGCGGCCACTTTCAGTTCAAGCTGCATATAGTGATGGTGGACGGTCAAGCAGTGCAGGCATTTTTATTGGAGGTTTTGTATTGGGAGGGCTCGTAGTTGGTACGCTTGGCTGTGTATATGCCCCTCAGATTAGCAAGGCACTTGCTGGAACAGACCGAAAAGATTTGATGAGGAAACTTCCCAAGTTCATATATGATGAAGAAAAAGCCTTAGAGAAAACAAGAAAAGTGCTGGCACAGAAGATTGAACAGTTGAACTCTGCCATTGATGAGGTTTCTTCTCAGCTCCGCACAGAGGATTCCCCAAATGGAGTGGCCGTAAACTCTGATGAAGTTGAACCTGCCATTTGAAAGTATCGTTACCTTGGTTTTCACCGCCCACGATTCGGGGACTAAGAATAATAGTTAATTTTCTAGCTATTATCTTTGATTTTCTGTCTTAATACGTTTGGAACTGAACTTTGATGTGCATTACACATCATCGCGTAATGTGGTGCTATGATCACTCAGATGCTCCTTCTAAAGTTGAATAGTTTGTAGAAGAGCATTCTTGCTGTTTCCTACTTTGTAAACGAACAGCCATTGTTTTGTATTTGAAAATCACATATTTCATTCCTTCCTCTTATTTGCATTTTTTAACTTGTCTGGCAGTCTTAAGCCAAATGATCCCTTGTTGCTGGGGCGTCCATTTTGTCTTCCAGCTAAAAACTAAATCTTAACAGGGAAAAGCGAGGTAGCAAAGCTTAATATTTGGTTTTTGGCGAGATTCTGGAGATTACAGGGGAAGAAATAGTGGAACATTGGAGGAGAAAAAAACCAAAGAATGAAACGTTATTATTTAAGCAAAAGTCAGGTTGGATCGAGTGAAGGCACTGGCCAATGTCTTCTCTGTATTTGCTGTTCCAAGCCAAGGGCGAAAATGACGTGGATGGATAGGCTATGACTCATTAACTTGGAACAATGAGAGGCAGACATTAGAGAGGGAAACGTCGGTGACTTGTCAGACTGAACAGGTGCCAGCTTGGACTACTACCAACAATCCTCTTGTAACAACATATAGCTTGAGGGCATTATTGGAAAGTTACATAGGTGAAAGATCTGTGGTTCAGAGGCTTCCTGAAATTGATAGGCGAAAAAGACTGCCTTATCTTATGTATCTGCCCCTCGCAGCTTTCTCACCACAAAACACTCTCTAGATCACTTGATTGCAAGTTGCCACAGTCCTTCCATCTATGATTAAAAAAGGGCAGCTTCTGTATAACCCAAATGCCAATTTCAGAGTTCTACAATTGATATACATTTGTGAAGTGGAGTTACGTAGCCCCTGAGTTAGCAGCCATGGCCACTCACGCAGCTCTGGCTTCAACAAGGATCCCCACCAACACAAGGCTTCCTTCCAAGACTTCCAATTCTTTCCGACCTCGATGCTCATCCAAGAGGCTGGATGTTGCTGAGTTCAATGGGCTTAGATCTGCTTGCCTGACCTTCTCTAACAATGGCAGAGAAGGATCGCTCTTCGACGTCGTGGCTGCTCAACTGACTCCCAAGGCAGTAGGATCATTTCCGGTTAGGGGAGAAACAGTGGCTAAACTCAAGGTGGCAATCAATGGATTTGGACGTATTGGCCGAAACTTCCTGCGGTGCTGGCATGGCAGGAAAGACTCGCCTCTCGATGTTGTCGTTGTCAACGACAGTGGTGGTGTCAAGAATGCCTCCCACTTGCTAAAATATGATTCCATGCTGGGAACTTTCAAGGCAGAGGTGAAAATTGTAGACAATGAAACCATATCTGTTGATGGGAAGCCAATCAAGGTTGTCTCAGGCAGGGACCCCCTCAAGCTTCCTTGGGGCGAGTTAGGCATTGACATTGTTATTGAGGGTACAGGAGTGTTCGTGGATGGCCCAGGGGCAGGGAAACACATCCAAGCAGGTGCAAAGAAGGTTCTCATCACTGCTCCTGCAAAAGGTGCTGATATTCCAACATATGTTGTTGGGGTAAACGAAAAAGATTACTACCATGATGTTGCTAACATCATTAGCAATGCTTCTTGCACCACCAATTGCCTTGCTCCTTTTGTGAAGATCATTGATGAGGAATTTGGCATTGTGAAGGGAACGATGACAACCACTCACTCCTACACTGGAGACCAGAGACTTTTGGATGCATCACACCGTGACTTGAGACGAGCCAGGGCCGCAGCTTTGAACATTGTCCCCACAAGCACTGGTGCAGCAAAGGCCGTATCCCTTGTGCTGCCCCAGCTTAAGGGCAAGCTCAATGGTATTGCACTTCGTGTGCCTACTCCAAATGTTTCAGTTGTTGACCTCGTTGTGAACGTTGCGAAGAAAGGCATCTCCGCAGATGATGTCAATGCTGCCTTCAGAAAGGCAGCTGATGGACCATTGAAGGGCGTGCTAGCCGTGTGCGATATTCCTCTTGTTTCTGTGGACTTTAAGTGCACTGATGTTTCCTCCACAATTGACTCTTCATTAACAATGGTAATGGGAGATGATATGCTCAAGGTGGTCGCCTGGTACGACAATGAATGGGGATACAGCCAAAGAGTTGTGGACTTGGCTCATTTGGTGGCAAGCAAATGGCCGGGAGTGGGATCGGGAACAAGTGGAGATCCGTTGGAGGATTTCTGCCAGACTAACCCAGCTGATGAAGAGTGCAAAGTTTATGAAGCTTAGGCATCATCATGTCTTTTGTTGGTTGCTTTGAGTCTAGGTCGTTTTTTAGCATTGCTGTACAATGCTTGTTTAGAATTCAAATTCAAGGAAGAGACTTTTTATCTATCCATTTGTAAAATTTGAAGACAGTGTTCTAAAGCTGCAATAACCTTTGAAAAGGGACAAAAATGAAGGAAAAACATGAACCACCCCCTTTACTACACCTTTTTCCCTCATATTTCCTCTGCAAATTAGTCCATTTTGTTCTTTTAGATGCTTTCCTCTGATTTCTTGTTCTAAACTTGAAGTGTACAAACTGGATTTAGACAGACTTAAATGTATTGATGAGGAGACGAAATTAATAAACCTGGCTGGTTGCTTCAATTTCTGTCTACAAACTTCTCAAGGATTTACCTCCAAATTACCATCATTCTTATCATTTTCGGACGATTTTTCAACTTTCCTTCGTTTGCTTTGCCTTGGTTCTTTCTTCTCATCAAACAACGACATGATTCGTCGAAGACGGTTCGGATGCGATCCACTACTGCTAGACAGATCAGATTCTTTTGAATCAGAATGGTATAGCTGACGAATAATCTGAAAGCAGTATATGGCAAGGGCAATGAAACACACTGTCCCACAGATAAGAAAGAGACCCCAGAAGCTCTTAAGTTGAAGCGAGTCTGATTCGAGATCTGTACTGTCTGAGGTGCAAGCACTTTTCACAACCCATTTGTCGTGTATCCGTTGCAGATCGCCGTTCTCGGATAGCTGCAAAATGGCAGTTGACATGTCTACAGCCAATGGAGAGTCTCGTGGGAATGCCTGAATTACCAAAAGGAGCAACAGGAGAATAGTTATTGATGTGTTCAATTTATCAAATACTAAATAAGAACGAAAACACTCACGAAACCCCAGCCGCTTTTGGTAAACTCTTGACCAACAACTCTGAATTTACACTCTCTAGAGATGAAATTTTCTACATATAGAAGTTCATCAACTACAGCAGCAACGCCTCCCTCCTTGCCAGGGCCAAGATCAAGTGCCTTGGCATATTCTTCCGGTGATCCAAGAGGAATAAGCCTAGATCTAGACACGTTCAGCTCCTCACTCAGATAACGTTCAGCAAAAGATCCAACTTGGAAACCAATCGGTTCATCAATTTCCCTCAAGGTTTCTATTCCTGTGATTGGAGAATATAGCTGCTGCACCGTGAGAATGGATGTTAAGCTTGCAGTGTAGCTAGAATTTATAATCAAAACCACAAACAGCCATATGATCAGCACGAAGCGGCCGAGA

Coding sequence (CDS)

ATGTCTGCTATATCCAATTCGTTGATTTTAACGAAAACCCCTCAACTCCAGTTATCAGCTGGATCAAATCTGAAAACTGCTGATAAACGATTTGGGAGTGTCTCCCCTACCCGCTTGTTACTCAATCCTGGTTGGGTGGGAAAGGCCAAGCTTTCTACATTTAGGCGGCCACTTTCAGTTCAAGCTGCATATAGTGATGGTGGACGGTCAAGCAGTGCAGGCATTTTTATTGGAGGTTTTGTATTGGGAGGGCTCGTAGTTGGTACGCTTGGCTGTGTATATGCCCCTCAGATTAGCAAGGCACTTGCTGGAACAGACCGAAAAGATTTGATGAGGAAACTTCCCAAGTTCATATATGATGAAGAAAAAGCCTTAGAGAAAACAAGAAAAGTGCTGGCACAGAAGATTGAACAGTTGAACTCTGCCATTGATGAGGTTTCTTCTCAGCTCCGCACAGAGGATTCCCCAAATGGAGTGGCCGTAAACTCTGATGAAGTTGAACCTGCCATTTGA

Protein sequence

MSAISNSLILTKTPQLQLSAGSNLKTADKRFGSVSPTRLLLNPGWVGKAKLSTFRRPLSVQAAYSDGGRSSSAGIFIGGFVLGGLVVGTLGCVYAPQISKALAGTDRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTEDSPNGVAVNSDEVEPAI

Homology

[Close]

BLAST of Cp4.1LG02g08670 vs. NCBI nr
Match: XP_023521457.1 (uncharacterized protein LOC111785280 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 320 bits (820), Expect = 6.87e-110
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0


Query: 1   MSAISNSLILTKTPQLQLSAGSNLKTADKRFGSVSPTRLLLNPGWVGKAKLSTFRRPLSV 60
           MSAISNSLILTKTPQLQLSAGSNLKTADKRFGSVSPTRLLLNPGWVGKAKLSTFRRPLSV
Sbjct: 1   MSAISNSLILTKTPQLQLSAGSNLKTADKRFGSVSPTRLLLNPGWVGKAKLSTFRRPLSV 60

Query: 61  QAAYSDGGRSSSAGIFIGGFVLGGLVVGTLGCVYAPQISKALAGTDRKDLMRKLPKFIYD 120
           QAAYSDGGRSSSAGIFIGGFVLGGLVVGTLGCVYAPQISKALAGTDRKDLMRKLPKFIYD
Sbjct: 61  QAAYSDGGRSSSAGIFIGGFVLGGLVVGTLGCVYAPQISKALAGTDRKDLMRKLPKFIYD 120

Query: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTEDSPNGVAVNSDEVEPAI 170
           EEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTEDSPNGVAVNSDEVEPAI
Sbjct: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTEDSPNGVAVNSDEVEPAI 170

[Close]

BLAST of Cp4.1LG02g08670 vs. NCBI nr
Match: XP_022941515.1 (uncharacterized protein LOC111446794 [Cucurbita moschata])

HSP 1 Score: 320 bits (819), Expect = 9.76e-110
Identity = 169/170 (99.41%), Postives = 170/170 (100.00%), Query Frame = 0


Query: 1   MSAISNSLILTKTPQLQLSAGSNLKTADKRFGSVSPTRLLLNPGWVGKAKLSTFRRPLSV 60
           MSAISNSLILTKTPQLQLSAGSNLKTADKRFGSVSPTRLLLNPGWVGKAKLSTFRRPLSV
Sbjct: 1   MSAISNSLILTKTPQLQLSAGSNLKTADKRFGSVSPTRLLLNPGWVGKAKLSTFRRPLSV 60

Query: 61  QAAYSDGGRSSSAGIFIGGFVLGGLVVGTLGCVYAPQISKALAGTDRKDLMRKLPKFIYD 120
           QAAYSDGGRSSSAGIFIGGFVLGGL+VGTLGCVYAPQISKALAGTDRKDLMRKLPKFIYD
Sbjct: 61  QAAYSDGGRSSSAGIFIGGFVLGGLIVGTLGCVYAPQISKALAGTDRKDLMRKLPKFIYD 120

Query: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTEDSPNGVAVNSDEVEPAI 170
           EEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTEDSPNGVAVNSDEVEPAI
Sbjct: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTEDSPNGVAVNSDEVEPAI 170

[Close]

BLAST of Cp4.1LG02g08670 vs. NCBI nr
Match: XP_022981122.1 (uncharacterized protein LOC111480366 [Cucurbita maxima])

HSP 1 Score: 318 bits (815), Expect = 3.97e-109
Identity = 167/170 (98.24%), Postives = 170/170 (100.00%), Query Frame = 0


Query: 1   MSAISNSLILTKTPQLQLSAGSNLKTADKRFGSVSPTRLLLNPGWVGKAKLSTFRRPLSV 60
           MSAISNSL+LTKTPQLQLSAGSNLKTADKRFGSVSPTRLLLNPGWVGKAKLSTFRRPLSV
Sbjct: 1   MSAISNSLVLTKTPQLQLSAGSNLKTADKRFGSVSPTRLLLNPGWVGKAKLSTFRRPLSV 60

Query: 61  QAAYSDGGRSSSAGIFIGGFVLGGLVVGTLGCVYAPQISKALAGTDRKDLMRKLPKFIYD 120
           QAAYSDGGRSSSAGIFIGGFVLGGL+VGTLGCVYAPQISKALAGTDRKDLMRKLPKFIYD
Sbjct: 61  QAAYSDGGRSSSAGIFIGGFVLGGLIVGTLGCVYAPQISKALAGTDRKDLMRKLPKFIYD 120

Query: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTEDSPNGVAVNSDEVEPAI 170
           EEKA+EKTRKVLAQKIEQLNSAIDEVSSQLRTEDSPNGVAVNSDEVEPAI
Sbjct: 121 EEKAVEKTRKVLAQKIEQLNSAIDEVSSQLRTEDSPNGVAVNSDEVEPAI 170

[Close]

BLAST of Cp4.1LG02g08670 vs. NCBI nr
Match: KAG6608647.1 (hypothetical protein SDJN03_01989, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 317 bits (813), Expect = 8.02e-109
Identity = 168/170 (98.82%), Postives = 169/170 (99.41%), Query Frame = 0


Query: 1   MSAISNSLILTKTPQLQLSAGSNLKTADKRFGSVSPTRLLLNPGWVGKAKLSTFRRPLSV 60
           MSAISNSLILTKTPQLQLSAGSNLKTADKRFGSVSPTR LLNPGWVGKAKLSTFRRPLSV
Sbjct: 1   MSAISNSLILTKTPQLQLSAGSNLKTADKRFGSVSPTRSLLNPGWVGKAKLSTFRRPLSV 60

Query: 61  QAAYSDGGRSSSAGIFIGGFVLGGLVVGTLGCVYAPQISKALAGTDRKDLMRKLPKFIYD 120
           QAAYSDGGRSSSAGIFIGGFVLGGL+VGTLGCVYAPQISKALAGTDRKDLMRKLPKFIYD
Sbjct: 61  QAAYSDGGRSSSAGIFIGGFVLGGLIVGTLGCVYAPQISKALAGTDRKDLMRKLPKFIYD 120

Query: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTEDSPNGVAVNSDEVEPAI 170
           EEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTEDSPNGVAVNSDEVEPAI
Sbjct: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTEDSPNGVAVNSDEVEPAI 170

[Close]

BLAST of Cp4.1LG02g08670 vs. NCBI nr
Match: XP_022936063.1 (uncharacterized protein LOC111442778 [Cucurbita moschata])

HSP 1 Score: 296 bits (757), Expect = 2.76e-100
Identity = 154/170 (90.59%), Postives = 163/170 (95.88%), Query Frame = 0


Query: 1   MSAISNSLILTKTPQLQLSAGSNLKTADKRFGSVSPTRLLLNPGWVGKAKLSTFRRPLSV 60
           M+AISNSL+ TK PQLQLS+GSNLKTADK  GSVSPT LLLNPGWVGKAKLST RRPLSV
Sbjct: 1   MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSV 60

Query: 61  QAAYSDGGRSSSAGIFIGGFVLGGLVVGTLGCVYAPQISKALAGTDRKDLMRKLPKFIYD 120
           QAAYSDGGRSS+AGIF+GGFVLGGL+VGTLGCVYAPQISKALAGTDRK+LMRKLPKFIYD
Sbjct: 61  QAAYSDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKLPKFIYD 120

Query: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTEDSPNGVAVNSDEVEPAI 170
           EEKALEKTRKVLAQKIEQLNSAIDEVSSQLRT+D PNGVAVNSDE+EPAI
Sbjct: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI 170

[Close]

BLAST of Cp4.1LG02g08670 vs. ExPASy TrEMBL
Match: A0A6J1FTW3 (uncharacterized protein LOC111446794 OS=Cucurbita moschata OX=3662 GN=LOC111446794 PE=4 SV=1)

HSP 1 Score: 320 bits (819), Expect = 4.72e-110
Identity = 169/170 (99.41%), Postives = 170/170 (100.00%), Query Frame = 0


Query: 1   MSAISNSLILTKTPQLQLSAGSNLKTADKRFGSVSPTRLLLNPGWVGKAKLSTFRRPLSV 60
           MSAISNSLILTKTPQLQLSAGSNLKTADKRFGSVSPTRLLLNPGWVGKAKLSTFRRPLSV
Sbjct: 1   MSAISNSLILTKTPQLQLSAGSNLKTADKRFGSVSPTRLLLNPGWVGKAKLSTFRRPLSV 60

Query: 61  QAAYSDGGRSSSAGIFIGGFVLGGLVVGTLGCVYAPQISKALAGTDRKDLMRKLPKFIYD 120
           QAAYSDGGRSSSAGIFIGGFVLGGL+VGTLGCVYAPQISKALAGTDRKDLMRKLPKFIYD
Sbjct: 61  QAAYSDGGRSSSAGIFIGGFVLGGLIVGTLGCVYAPQISKALAGTDRKDLMRKLPKFIYD 120

Query: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTEDSPNGVAVNSDEVEPAI 170
           EEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTEDSPNGVAVNSDEVEPAI
Sbjct: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTEDSPNGVAVNSDEVEPAI 170

[Close]

BLAST of Cp4.1LG02g08670 vs. ExPASy TrEMBL
Match: A0A6J1IT36 (uncharacterized protein LOC111480366 OS=Cucurbita maxima OX=3661 GN=LOC111480366 PE=4 SV=1)

HSP 1 Score: 318 bits (815), Expect = 1.92e-109
Identity = 167/170 (98.24%), Postives = 170/170 (100.00%), Query Frame = 0


Query: 1   MSAISNSLILTKTPQLQLSAGSNLKTADKRFGSVSPTRLLLNPGWVGKAKLSTFRRPLSV 60
           MSAISNSL+LTKTPQLQLSAGSNLKTADKRFGSVSPTRLLLNPGWVGKAKLSTFRRPLSV
Sbjct: 1   MSAISNSLVLTKTPQLQLSAGSNLKTADKRFGSVSPTRLLLNPGWVGKAKLSTFRRPLSV 60

Query: 61  QAAYSDGGRSSSAGIFIGGFVLGGLVVGTLGCVYAPQISKALAGTDRKDLMRKLPKFIYD 120
           QAAYSDGGRSSSAGIFIGGFVLGGL+VGTLGCVYAPQISKALAGTDRKDLMRKLPKFIYD
Sbjct: 61  QAAYSDGGRSSSAGIFIGGFVLGGLIVGTLGCVYAPQISKALAGTDRKDLMRKLPKFIYD 120

Query: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTEDSPNGVAVNSDEVEPAI 170
           EEKA+EKTRKVLAQKIEQLNSAIDEVSSQLRTEDSPNGVAVNSDEVEPAI
Sbjct: 121 EEKAVEKTRKVLAQKIEQLNSAIDEVSSQLRTEDSPNGVAVNSDEVEPAI 170

[Close]

BLAST of Cp4.1LG02g08670 vs. ExPASy TrEMBL
Match: A0A6J1FC82 (uncharacterized protein LOC111442778 OS=Cucurbita moschata OX=3662 GN=LOC111442778 PE=4 SV=1)

HSP 1 Score: 296 bits (757), Expect = 1.34e-100
Identity = 154/170 (90.59%), Postives = 163/170 (95.88%), Query Frame = 0


Query: 1   MSAISNSLILTKTPQLQLSAGSNLKTADKRFGSVSPTRLLLNPGWVGKAKLSTFRRPLSV 60
           M+AISNSL+ TK PQLQLS+GSNLKTADK  GSVSPT LLLNPGWVGKAKLST RRPLSV
Sbjct: 1   MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSV 60

Query: 61  QAAYSDGGRSSSAGIFIGGFVLGGLVVGTLGCVYAPQISKALAGTDRKDLMRKLPKFIYD 120
           QAAYSDGGRSS+AGIF+GGFVLGGL+VGTLGCVYAPQISKALAGTDRK+LMRKLPKFIYD
Sbjct: 61  QAAYSDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKLPKFIYD 120

Query: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTEDSPNGVAVNSDEVEPAI 170
           EEKALEKTRKVLAQKIEQLNSAIDEVSSQLRT+D PNGVAVNSDE+EPAI
Sbjct: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI 170

[Close]

BLAST of Cp4.1LG02g08670 vs. ExPASy TrEMBL
Match: A0A6J1IGB6 (uncharacterized protein LOC111474436 OS=Cucurbita maxima OX=3661 GN=LOC111474436 PE=4 SV=1)

HSP 1 Score: 291 bits (745), Expect = 9.03e-99
Identity = 152/170 (89.41%), Postives = 161/170 (94.71%), Query Frame = 0


Query: 1   MSAISNSLILTKTPQLQLSAGSNLKTADKRFGSVSPTRLLLNPGWVGKAKLSTFRRPLSV 60
           M+AISNSL+ TK PQL LS+GSNLKTADK  GSVSPT LLLNPGWVGKAKLST RRPLSV
Sbjct: 1   MAAISNSLVSTKNPQLPLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSV 60

Query: 61  QAAYSDGGRSSSAGIFIGGFVLGGLVVGTLGCVYAPQISKALAGTDRKDLMRKLPKFIYD 120
           QAAYSD GRSS+AGIF+GGFVLGGL+VGTLGCVYAPQISKALAGTDRK+LMRKLPKFIYD
Sbjct: 61  QAAYSDSGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKLPKFIYD 120

Query: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTEDSPNGVAVNSDEVEPAI 170
           EEKALEKTRKVLAQKIEQLNSAIDEVSSQLRT+D PNGVAVNSDE+EPAI
Sbjct: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI 170

[Close]

BLAST of Cp4.1LG02g08670 vs. ExPASy TrEMBL
Match: A0A1S3BV81 (uncharacterized protein LOC103493844 OS=Cucumis melo OX=3656 GN=LOC103493844 PE=4 SV=1)

HSP 1 Score: 289 bits (740), Expect = 5.22e-98
Identity = 150/170 (88.24%), Postives = 161/170 (94.71%), Query Frame = 0


Query: 1   MSAISNSLILTKTPQLQLSAGSNLKTADKRFGSVSPTRLLLNPGWVGKAKLSTFRRPLSV 60
           M+AISNSL+LTK PQLQL+ GSNLKT DKR GS+SPT L+L+PGWVGKAKLSTFRRPLSV
Sbjct: 1   MTAISNSLVLTKNPQLQLTHGSNLKTVDKRLGSLSPTSLVLSPGWVGKAKLSTFRRPLSV 60

Query: 61  QAAYSDGGRSSSAGIFIGGFVLGGLVVGTLGCVYAPQISKALAGTDRKDLMRKLPKFIYD 120
           QAAYSDGGRSS+AGIFIGGFVLGG++VGTLGCVYAPQISKA+AG DRKDLMRKLPKFIYD
Sbjct: 61  QAAYSDGGRSSNAGIFIGGFVLGGIIVGTLGCVYAPQISKAIAGADRKDLMRKLPKFIYD 120

Query: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTEDSPNGVAVNSDEVEPAI 170
           EEKALEKTRKVLAQKIEQLNSAIDEVS+QLR ED PNGVAVNSDEVE AI
Sbjct: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSAQLRPEDPPNGVAVNSDEVESAI 170

[Close]

BLAST of Cp4.1LG02g08670 vs. TAIR 10
Match: AT1G42960.1 (expressed protein localized to the inner membrane of the chloroplast. )

HSP 1 Score: 171.8 bits (434), Expect = 4.8e-43
Identity = 84/113 (74.34%), Postives = 102/113 (90.27%), Query Frame = 0


Query: 55  RRPLSVQAAYSDGGRSSSAGIFIGGFVLGGLVVGTLGCVYAPQISKALAGTDRKDLMRKL 114
           +R L++Q+AY D   S S G+F+GGF+LGGL+VG LGCVYAPQISKA+AG DRKDLMRKL
Sbjct: 53  KRILTIQSAYRDDDGSGSTGLFVGGFILGGLIVGALGCVYAPQISKAIAGADRKDLMRKL 112

Query: 115 PKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTEDSPNGVAVNSDEVE 168
           PKFIYDEEKALEKTRKVLA+KI QLNSAID+VSSQL++ED+PNG A+++DE+E
Sbjct: 113 PKFIYDEEKALEKTRKVLAEKIAQLNSAIDDVSSQLKSEDTPNGAALSTDEIE 165

[Close]

BLAST of Cp4.1LG02g08670 vs. TAIR 10
Match: AT5G16660.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 79.7 bits (195), Expect = 2.5e-15
Identity = 56/122 (45.90%), Postives = 73/122 (59.84%), Query Frame = 0


Query: 50  KLSTFRRPLSVQAAYSDGGRSSSAGIFIGGFVLGGLVVGTLGCVYAPQISKALAGTDRKD 109
           K S   R  SV A Y DG RS S+G FI GF+LGG V G +  ++APQI +++   + + 
Sbjct: 45  KKSNRTRKFSVSAGYRDGSRSGSSGDFIAGFLLGGAVFGAVAYIFAPQIRRSVLNEEDEY 104

Query: 110 LMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTED---SPNGVAVNSD-E 168
              K  +  Y +E  LEKTR+ L +KI QLNSAID VSS+LR  +   S   V V +D E
Sbjct: 105 GFEKPKQPTYYDE-GLEKTRETLNEKIGQLNSAIDNVSSRLRGREKNTSSLNVPVETDPE 164

[Close]

BLAST of Cp4.1LG02g08670 vs. TAIR 10
Match: AT5G16660.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02900.1); Has 106 Blast hits to 106 proteins in 32 species: Archae - 0; Bacteria - 28; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 72.4 bits (176), Expect = 3.9e-13
Identity = 55/122 (45.08%), Postives = 72/122 (59.02%), Query Frame = 0


Query: 50  KLSTFRRPLSVQAAYSDGGRSSSAGIFIGGFVLGGLVVGTLGCVYAPQISKALAGTDRKD 109
           K S   R  SV A   DG RS S+G FI GF+LGG V G +  ++APQI +++   + + 
Sbjct: 45  KKSNRTRKFSVSA--GDGSRSGSSGDFIAGFLLGGAVFGAVAYIFAPQIRRSVLNEEDEY 104

Query: 110 LMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTED---SPNGVAVNSD-E 168
              K  +  Y +E  LEKTR+ L +KI QLNSAID VSS+LR  +   S   V V +D E
Sbjct: 105 GFEKPKQPTYYDE-GLEKTRETLNEKIGQLNSAIDNVSSRLRGREKNTSSLNVPVETDPE 163

[Close]

BLAST of Cp4.1LG02g08670 vs. TAIR 10
Match: AT3G02900.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16660.1); Has 80 Blast hits to 80 proteins in 21 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 67.8 bits (164), Expect = 9.7e-12
Identity = 42/109 (38.53%), Postives = 62/109 (56.88%), Query Frame = 0


Query: 58  LSVQAAYSDGGRSSSAGIFIGGFVLGGLVVGTLGCVYAPQISKALAGTDRKDLMRKLPKF 117
           LSV A Y  G +   +  F+ GF+LG  V GTL  ++APQI +++   +     +     
Sbjct: 44  LSVSAGYRGGSKGGGSSDFVTGFLLGSAVFGTLAYIFAPQIRRSVLSENEYGFKKPEQPM 103

Query: 118 IYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTEDSPNGVAVNSDEV 167
            YDE   LE+ R++L +KI QLNSAID+VSS+L+   S +    +S  V
Sbjct: 104 YYDE--GLEERREILNEKIGQLNSAIDKVSSRLKGGRSGSSKNTSSPSV 150

[Close]

BLAST of Cp4.1LG02g08670 vs. TAIR 10
Match: AT3G02900.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16660.1). )

HSP 1 Score: 67.8 bits (164), Expect = 9.7e-12
Identity = 42/109 (38.53%), Postives = 62/109 (56.88%), Query Frame = 0


Query: 58  LSVQAAYSDGGRSSSAGIFIGGFVLGGLVVGTLGCVYAPQISKALAGTDRKDLMRKLPKF 117
           LSV A Y  G +   +  F+ GF+LG  V GTL  ++APQI +++   +     +     
Sbjct: 43  LSVSAGYRGGSKGGGSSDFVTGFLLGSAVFGTLAYIFAPQIRRSVLSENEYGFKKPEQPM 102

Query: 118 IYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTEDSPNGVAVNSDEV 167
            YDE   LE+ R++L +KI QLNSAID+VSS+L+   S +    +S  V
Sbjct: 103 YYDE--GLEERREILNEKIGQLNSAIDKVSSRLKGGRSGSSKNTSSPSV 149

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g08670 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG02g08670 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023521457.1	6.87e-110	100.00	uncharacterized protein LOC111785280 [Cucurbita pepo subsp. pepo]	[more]
XP_022941515.1	9.76e-110	99.41	uncharacterized protein LOC111446794 [Cucurbita moschata]	[more]
XP_022981122.1	3.97e-109	98.24	uncharacterized protein LOC111480366 [Cucurbita maxima]	[more]
KAG6608647.1	8.02e-109	98.82	hypothetical protein SDJN03_01989, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022936063.1	2.76e-100	90.59	uncharacterized protein LOC111442778 [Cucurbita moschata]	[more]

BLAST of Cp4.1LG02g08670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FTW3	4.72e-110	99.41	uncharacterized protein LOC111446794 OS=Cucurbita moschata OX=3662 GN=LOC1114467...	[more]
A0A6J1IT36	1.92e-109	98.24	uncharacterized protein LOC111480366 OS=Cucurbita maxima OX=3661 GN=LOC111480366...	[more]
A0A6J1FC82	1.34e-100	90.59	uncharacterized protein LOC111442778 OS=Cucurbita moschata OX=3662 GN=LOC1114427...	[more]
A0A6J1IGB6	9.03e-99	89.41	uncharacterized protein LOC111474436 OS=Cucurbita maxima OX=3661 GN=LOC111474436...	[more]
A0A1S3BV81	5.22e-98	88.24	uncharacterized protein LOC103493844 OS=Cucumis melo OX=3656 GN=LOC103493844 PE=...	[more]

BLAST of Cp4.1LG02g08670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G42960.1	4.8e-43	74.34	expressed protein localized to the inner membrane of the chloroplast.	[more]
AT5G16660.1	2.5e-15	45.90	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G16660.2	3.9e-13	45.08	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G02900.1	9.7e-12	38.53	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G02900.2	9.7e-12	38.53	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 122..149
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 147..170
None	No IPR available	PANTHER	PTHR34048	LOW-DENSITY RECEPTOR-LIKE PROTEIN	coord: 1..170
None	No IPR available	PANTHER	PTHR34048:SF9	SUBFAMILY NOT NAMED	coord: 1..170

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG02g08670.1	Cp4.1LG02g08670.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0016021	integral component of membrane