Cp4.1LG02g08480 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG02g08480
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Large proline-rich protein bag6-B isoform X1
Location	Cp4.1LG02: 248026 .. 249100 (+)
RNA-Seq Expression	Cp4.1LG02g08480
Synteny	Cp4.1LG02g08480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCCTCTCAATTTTGTTGGCCTCTCAATTTTGTTGCCTCTTCCTGCGCTTTCATTACAAAGCAAATAGGATCCCCTTTGATTTTCCGGGGAAAGGTCCCAAAGGATGAACGCCCATCCTCTAAGTATCATACCTCTGTATTCCTCTCTTTTCCTGCCCTAATTCTCATTTCATCTCCTTTCTTTCCCCTTTTCTTCTCCATCCTTCAACAACTCCTCCGCTTTCATGAACCGTTTCGAGCGAGCAATCTCTCAAAATGTTTCTCAAAATGGTGGTGGTAAATGTTCAACCCCTGTATCCTCCATTACTTGATTTTATTCCAATTAATCTTTTTACATTTTCTTACATACAACGTAGGAGCTCTACCAAGGTTCGAACTCCCCACCAATCCCCAAGATCTGCAGACTCCTAAATCTTTGAGTATTGTTTTGCGAAATGCACAACACCTCCTAAGTGAATATGCAATATATTCACTTCCGGTGAGTATTATATTCGGACACTCAAAAGAGTTTTTTATTCAATCCTGCCTTCTTTTGATATGCAATAACATGTAGCGCATCGCTGAGCGTTTCGAGCAAGACGGTTCCTCGACTGATCCAATGGTGAGGGGTCAAATACAGGAAGAGTTAGTGCAAGTAGGACTTAGGATGCAACAGTTCGGCGCGCTTCTTCTCGATCTCGGCAGTTCAATCTTGACGCTCCATTTGGAACAATCCACGGTAGTTTGAGATTCAAATGTGTAATTAGGTTTCAAAATATGCGTTAATTTAATATATGGTGGTGGTGTTTAGATTGACCATAAAGATCTCGCTCAAAGGATTACATCTACCAATTCTCCTATGGATGTGTTTCGCGCTGTGGTTGAGAGTTCGGCTCAGGTTTCTGGCTGCAACAATGAAGATATTGCAGATGAGTTGTGCAGCCATGACACGCTTGCTGAGGTCAGTCTTTTATTATTCTTATTATTTATTTCTATTTAATTCTCTTTGTTTAAAAACTTTGATTTGATTGGAATTTTGTAGGAATATTTAGGGATATTATCAAATGATATCAAACGACGTTTGCAAGGCAATTGA

mRNA sequence

GGCCTCTCAATTTTGTTGGCCTCTCAATTTTGTTGCCTCTTCCTGCGCTTTCATTACAAAGCAAATAGGATCCCCTTTGATTTTCCGGGGAAAGGTCCCAAAGGATGAACGCCCATCCTCTAAGTATCATACCTCTGTATTCCTCTCTTTTCCTGCCCTAATTCTCATTTCATCTCCTTTCTTTCCCCTTTTCTTCTCCATCCTTCAACAACTCCTCCGCTTTCATGAACCGTTTCGAGCGAGCAATCTCTCAAAATGTTTCTCAAAATGGTGGTGGAGCTCTACCAAGGTTCGAACTCCCCACCAATCCCCAAGATCTGCAGACTCCTAAATCTTTGAGTATTGTTTTGCGAAATGCACAACACCTCCTAAGTGAATATGCAATATATTCACTTCCGCGCATCGCTGAGCGTTTCGAGCAAGACGGTTCCTCGACTGATCCAATGGTGAGGGGTCAAATACAGGAAGAGTTAGTGCAAGTAGGACTTAGGATGCAACAGTTCGGCGCGCTTCTTCTCGATCTCGGCAGTTCAATCTTGACGCTCCATTTGGAACAATCCACGATTGACCATAAAGATCTCGCTCAAAGGATTACATCTACCAATTCTCCTATGGATGTGTTTCGCGCTGTGGTTGAGAGTTCGGCTCAGGTTTCTGGCTGCAACAATGAAGATATTGCAGATGAGTTGTGCAGCCATGACACGCTTGCTGAGGAATATTTAGGGATATTATCAAATGATATCAAACGACGTTTGCAAGGCAATTGA

Coding sequence (CDS)

ATGAACCGTTTCGAGCGAGCAATCTCTCAAAATGTTTCTCAAAATGGTGGTGGAGCTCTACCAAGGTTCGAACTCCCCACCAATCCCCAAGATCTGCAGACTCCTAAATCTTTGAGTATTGTTTTGCGAAATGCACAACACCTCCTAAGTGAATATGCAATATATTCACTTCCGCGCATCGCTGAGCGTTTCGAGCAAGACGGTTCCTCGACTGATCCAATGGTGAGGGGTCAAATACAGGAAGAGTTAGTGCAAGTAGGACTTAGGATGCAACAGTTCGGCGCGCTTCTTCTCGATCTCGGCAGTTCAATCTTGACGCTCCATTTGGAACAATCCACGATTGACCATAAAGATCTCGCTCAAAGGATTACATCTACCAATTCTCCTATGGATGTGTTTCGCGCTGTGGTTGAGAGTTCGGCTCAGGTTTCTGGCTGCAACAATGAAGATATTGCAGATGAGTTGTGCAGCCATGACACGCTTGCTGAGGAATATTTAGGGATATTATCAAATGATATCAAACGACGTTTGCAAGGCAATTGA

Protein sequence

MNRFERAISQNVSQNGGGALPRFELPTNPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRIAERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLGSSILTLHLEQSTIDHKDLAQRITSTNSPMDVFRAVVESSAQVSGCNNEDIADELCSHDTLAEEYLGILSNDIKRRLQGN

Homology

[Close]

BLAST of Cp4.1LG02g08480 vs. ExPASy Swiss-Prot
Match: D5LXJ0 (Ubiquitin-like domain-containing protein CIP73 OS=Lotus japonicus OX=34305 GN=CIP73 PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.4e-05
Identity = 28/88 (31.82%), Postives = 47/88 (53.41%), Query Frame = 0


Query: 25  LPTNPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRIAERFEQDGSSTDPMVRGQIQEELV 84
           L + P+ L +P SL+ VL + + ++ E A   L ++A + E      DP+ R   Q   +
Sbjct: 275 LSSTPEGLSSPASLAEVLLSTRRVIIEQAGECLLQLARQLENHADIADPLSRSSTQSRAL 334

Query: 85  QVGLRMQQFGALLLDLGSSILTLHLEQS 113
           + G+     GA LL+LG + +TL L Q+
Sbjct: 335 RTGVMFYNLGAYLLELGRTTMTLRLGQT 362

[Close]

BLAST of Cp4.1LG02g08480 vs. NCBI nr
Match: XP_023525662.1 (uncharacterized protein LOC111789201 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 352 bits (904), Expect = 2.28e-122
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MNRFERAISQNVSQNGGGALPRFELPTNPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRI 60
           MNRFERAISQNVSQNGGGALPRFELPTNPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRI
Sbjct: 1   MNRFERAISQNVSQNGGGALPRFELPTNPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRI 60

Query: 61  AERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLGSSILTLHLEQSTIDHKDLA 120
           AERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLGSSILTLHLEQSTIDHKDLA
Sbjct: 61  AERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLGSSILTLHLEQSTIDHKDLA 120

Query: 121 QRITSTNSPMDVFRAVVESSAQVSGCNNEDIADELCSHDTLAEEYLGILSNDIKRRLQGN 180
           QRITSTNSPMDVFRAVVESSAQVSGCNNEDIADELCSHDTLAEEYLGILSNDIKRRLQGN
Sbjct: 121 QRITSTNSPMDVFRAVVESSAQVSGCNNEDIADELCSHDTLAEEYLGILSNDIKRRLQGN 180

[Close]

BLAST of Cp4.1LG02g08480 vs. NCBI nr
Match: XP_023525663.1 (uncharacterized protein LOC111789201 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 345 bits (886), Expect = 1.22e-119
Identity = 179/180 (99.44%), Postives = 179/180 (99.44%), Query Frame = 0


Query: 1   MNRFERAISQNVSQNGGGALPRFELPTNPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRI 60
           MNRFERAISQNVSQNGG ALPRFELPTNPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRI
Sbjct: 1   MNRFERAISQNVSQNGG-ALPRFELPTNPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRI 60

Query: 61  AERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLGSSILTLHLEQSTIDHKDLA 120
           AERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLGSSILTLHLEQSTIDHKDLA
Sbjct: 61  AERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLGSSILTLHLEQSTIDHKDLA 120

Query: 121 QRITSTNSPMDVFRAVVESSAQVSGCNNEDIADELCSHDTLAEEYLGILSNDIKRRLQGN 180
           QRITSTNSPMDVFRAVVESSAQVSGCNNEDIADELCSHDTLAEEYLGILSNDIKRRLQGN
Sbjct: 121 QRITSTNSPMDVFRAVVESSAQVSGCNNEDIADELCSHDTLAEEYLGILSNDIKRRLQGN 179

[Close]

BLAST of Cp4.1LG02g08480 vs. NCBI nr
Match: XP_022940175.1 (uncharacterized protein LOC111445881 isoform X1 [Cucurbita moschata])

HSP 1 Score: 343 bits (881), Expect = 7.07e-119
Identity = 178/180 (98.89%), Postives = 178/180 (98.89%), Query Frame = 0


Query: 1   MNRFERAISQNVSQNGGGALPRFELPTNPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRI 60
           MNRFERAISQNVSQNGG ALPRFELP NPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRI
Sbjct: 1   MNRFERAISQNVSQNGG-ALPRFELPANPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRI 60

Query: 61  AERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLGSSILTLHLEQSTIDHKDLA 120
           AERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLGSSILTLHLEQSTIDHKDLA
Sbjct: 61  AERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLGSSILTLHLEQSTIDHKDLA 120

Query: 121 QRITSTNSPMDVFRAVVESSAQVSGCNNEDIADELCSHDTLAEEYLGILSNDIKRRLQGN 180
           QRITSTNSPMDVFRAVVESSAQVSGCNNEDIADELCSHDTLAEEYLGILSNDIKRRLQGN
Sbjct: 121 QRITSTNSPMDVFRAVVESSAQVSGCNNEDIADELCSHDTLAEEYLGILSNDIKRRLQGN 179

[Close]

BLAST of Cp4.1LG02g08480 vs. NCBI nr
Match: KAG7037937.1 (hypothetical protein SDJN02_01570 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 343 bits (881), Expect = 7.07e-119
Identity = 178/180 (98.89%), Postives = 179/180 (99.44%), Query Frame = 0


Query: 1   MNRFERAISQNVSQNGGGALPRFELPTNPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRI 60
           MNRFERAISQNVSQNGG ALPRFELPTNPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRI
Sbjct: 1   MNRFERAISQNVSQNGG-ALPRFELPTNPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRI 60

Query: 61  AERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLGSSILTLHLEQSTIDHKDLA 120
           AERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLGSSILTLHLEQSTIDHKDLA
Sbjct: 61  AERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLGSSILTLHLEQSTIDHKDLA 120

Query: 121 QRITSTNSPMDVFRAVVESSAQVSGCNNEDIADELCSHDTLAEEYLGILSNDIKRRLQGN 180
           QRITSTNSPMDVFRAVVESSAQVSGCN+EDIADELCSHDTLAEEYLGILSNDIKRRLQGN
Sbjct: 121 QRITSTNSPMDVFRAVVESSAQVSGCNSEDIADELCSHDTLAEEYLGILSNDIKRRLQGN 179

[Close]

BLAST of Cp4.1LG02g08480 vs. NCBI nr
Match: XP_023525664.1 (uncharacterized protein LOC111789201 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 343 bits (879), Expect = 1.38e-118
Identity = 178/180 (98.89%), Postives = 178/180 (98.89%), Query Frame = 0


Query: 1   MNRFERAISQNVSQNGGGALPRFELPTNPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRI 60
           MNRFERAISQNVSQNG  ALPRFELPTNPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRI
Sbjct: 1   MNRFERAISQNVSQNG--ALPRFELPTNPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRI 60

Query: 61  AERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLGSSILTLHLEQSTIDHKDLA 120
           AERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLGSSILTLHLEQSTIDHKDLA
Sbjct: 61  AERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLGSSILTLHLEQSTIDHKDLA 120

Query: 121 QRITSTNSPMDVFRAVVESSAQVSGCNNEDIADELCSHDTLAEEYLGILSNDIKRRLQGN 180
           QRITSTNSPMDVFRAVVESSAQVSGCNNEDIADELCSHDTLAEEYLGILSNDIKRRLQGN
Sbjct: 121 QRITSTNSPMDVFRAVVESSAQVSGCNNEDIADELCSHDTLAEEYLGILSNDIKRRLQGN 178

[Close]

BLAST of Cp4.1LG02g08480 vs. ExPASy TrEMBL
Match: A0A6J1FPT9 (uncharacterized protein LOC111445881 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445881 PE=4 SV=1)

HSP 1 Score: 343 bits (881), Expect = 3.42e-119
Identity = 178/180 (98.89%), Postives = 178/180 (98.89%), Query Frame = 0


Query: 1   MNRFERAISQNVSQNGGGALPRFELPTNPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRI 60
           MNRFERAISQNVSQNGG ALPRFELP NPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRI
Sbjct: 1   MNRFERAISQNVSQNGG-ALPRFELPANPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRI 60

Query: 61  AERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLGSSILTLHLEQSTIDHKDLA 120
           AERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLGSSILTLHLEQSTIDHKDLA
Sbjct: 61  AERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLGSSILTLHLEQSTIDHKDLA 120

Query: 121 QRITSTNSPMDVFRAVVESSAQVSGCNNEDIADELCSHDTLAEEYLGILSNDIKRRLQGN 180
           QRITSTNSPMDVFRAVVESSAQVSGCNNEDIADELCSHDTLAEEYLGILSNDIKRRLQGN
Sbjct: 121 QRITSTNSPMDVFRAVVESSAQVSGCNNEDIADELCSHDTLAEEYLGILSNDIKRRLQGN 179

[Close]

BLAST of Cp4.1LG02g08480 vs. ExPASy TrEMBL
Match: A0A6J1FHQ5 (uncharacterized protein LOC111445881 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111445881 PE=4 SV=1)

HSP 1 Score: 341 bits (874), Expect = 3.86e-118
Identity = 177/180 (98.33%), Postives = 177/180 (98.33%), Query Frame = 0


Query: 1   MNRFERAISQNVSQNGGGALPRFELPTNPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRI 60
           MNRFERAISQNVSQNG  ALPRFELP NPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRI
Sbjct: 1   MNRFERAISQNVSQNG--ALPRFELPANPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRI 60

Query: 61  AERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLGSSILTLHLEQSTIDHKDLA 120
           AERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLGSSILTLHLEQSTIDHKDLA
Sbjct: 61  AERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLGSSILTLHLEQSTIDHKDLA 120

Query: 121 QRITSTNSPMDVFRAVVESSAQVSGCNNEDIADELCSHDTLAEEYLGILSNDIKRRLQGN 180
           QRITSTNSPMDVFRAVVESSAQVSGCNNEDIADELCSHDTLAEEYLGILSNDIKRRLQGN
Sbjct: 121 QRITSTNSPMDVFRAVVESSAQVSGCNNEDIADELCSHDTLAEEYLGILSNDIKRRLQGN 178

[Close]

BLAST of Cp4.1LG02g08480 vs. ExPASy TrEMBL
Match: A0A6J1IWC0 (uncharacterized protein LOC111481190 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111481190 PE=4 SV=1)

HSP 1 Score: 337 bits (863), Expect = 1.90e-116
Identity = 174/180 (96.67%), Postives = 176/180 (97.78%), Query Frame = 0


Query: 1   MNRFERAISQNVSQNGGGALPRFELPTNPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRI 60
           MNRFERAISQNVSQNGG  LPRFELPTNPQDLQTPKSLSIVLRNAQHLLS+YAI+SLPRI
Sbjct: 1   MNRFERAISQNVSQNGG-VLPRFELPTNPQDLQTPKSLSIVLRNAQHLLSDYAIHSLPRI 60

Query: 61  AERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLGSSILTLHLEQSTIDHKDLA 120
           AERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLGSSILTLHLEQSTIDHKDLA
Sbjct: 61  AERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLGSSILTLHLEQSTIDHKDLA 120

Query: 121 QRITSTNSPMDVFRAVVESSAQVSGCNNEDIADELCSHDTLAEEYLGILSNDIKRRLQGN 180
           QRITSTNSPMDVFRAVVESSAQVSGCNNEDIADELCSHD LAEEYL ILSNDIKRRLQGN
Sbjct: 121 QRITSTNSPMDVFRAVVESSAQVSGCNNEDIADELCSHDALAEEYLAILSNDIKRRLQGN 179

[Close]

BLAST of Cp4.1LG02g08480 vs. ExPASy TrEMBL
Match: A0A6J1J4J7 (uncharacterized protein LOC111481190 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111481190 PE=4 SV=1)

HSP 1 Score: 334 bits (856), Expect = 2.14e-115
Identity = 173/180 (96.11%), Postives = 175/180 (97.22%), Query Frame = 0


Query: 1   MNRFERAISQNVSQNGGGALPRFELPTNPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRI 60
           MNRFERAISQNVSQNG   LPRFELPTNPQDLQTPKSLSIVLRNAQHLLS+YAI+SLPRI
Sbjct: 1   MNRFERAISQNVSQNG--VLPRFELPTNPQDLQTPKSLSIVLRNAQHLLSDYAIHSLPRI 60

Query: 61  AERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLGSSILTLHLEQSTIDHKDLA 120
           AERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLGSSILTLHLEQSTIDHKDLA
Sbjct: 61  AERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLGSSILTLHLEQSTIDHKDLA 120

Query: 121 QRITSTNSPMDVFRAVVESSAQVSGCNNEDIADELCSHDTLAEEYLGILSNDIKRRLQGN 180
           QRITSTNSPMDVFRAVVESSAQVSGCNNEDIADELCSHD LAEEYL ILSNDIKRRLQGN
Sbjct: 121 QRITSTNSPMDVFRAVVESSAQVSGCNNEDIADELCSHDALAEEYLAILSNDIKRRLQGN 178

[Close]

BLAST of Cp4.1LG02g08480 vs. ExPASy TrEMBL
Match: A0A5A7VE91 (Large proline-rich protein bag6-B isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G003490 PE=4 SV=1)

HSP 1 Score: 278 bits (710), Expect = 4.38e-93
Identity = 145/180 (80.56%), Postives = 164/180 (91.11%), Query Frame = 0


Query: 1   MNRFERAISQNVSQNGGGALPRFELPTNPQDLQTPKSLSIVLRNAQHLLSEYAIYSLPRI 60
           MNRFERAIS  +SQNGGGA PRFELPTNPQ+LQ+P+SLSIVLRNAQ LLS+YAI+SLPRI
Sbjct: 1   MNRFERAIS--ISQNGGGA-PRFELPTNPQELQSPESLSIVLRNAQKLLSDYAIFSLPRI 60

Query: 61  AERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLGSSILTLHLEQSTIDHKDLA 120
           AERFEQDGSS+DP VRGQIQEELVQVGLRMQQFGALLLDLGSSILTL LEQST+D +DLA
Sbjct: 61  AERFEQDGSSSDPDVRGQIQEELVQVGLRMQQFGALLLDLGSSILTLRLEQSTVDLQDLA 120

Query: 121 QRITSTNSPMDVFRAVVESSAQVSGCNNEDIADELCSHDTLAEEYLGILSNDIKRRLQGN 180
           +R+ STN PMDVFRAVVESSA++SG +  DIA+ LC+HD+LAEEYL IL++DI RRLQ N
Sbjct: 121 ERVVSTNCPMDVFRAVVESSARISGSSTHDIANHLCTHDSLAEEYLEILASDITRRLQSN 177

[Close]

BLAST of Cp4.1LG02g08480 vs. TAIR 10
Match: AT5G42220.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 119.8 bits (299), Expect = 2.3e-27
Identity = 67/117 (57.26%), Postives = 80/117 (68.38%), Query Frame = 0


Query: 1   MNRFERAISQN-----VSQNGGGALPRFELPTNPQDLQTPKSLSIVLRNAQHLLSEYAIY 60
           +NR E+A+SQN      S  G G  PR ELP N +   TP++LS+VLRNAQHLLS   + 
Sbjct: 261 INRMEQALSQNGYQPDTSSAGSGGRPREELPRNRRGAATPEALSVVLRNAQHLLSGLGVS 320

Query: 61  SLPRIAERFEQDGSSTDPMVRGQIQEELVQVGLRMQQFGALLLDLGSSILTLHLEQS 113
           SL  IA R EQDGSS+DP +R QIQ E VQVGL MQ  GALLL+LG +ILTL +  S
Sbjct: 321 SLSHIAGRLEQDGSSSDPTLRSQIQTEAVQVGLAMQHLGALLLELGRTILTLRMAPS 377

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g08480 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
D5LXJ0	1.4e-05	31.82	Ubiquitin-like domain-containing protein CIP73 OS=Lotus japonicus OX=34305 GN=CI...	[more]

BLAST of Cp4.1LG02g08480 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023525662.1	2.28e-122	100.00	uncharacterized protein LOC111789201 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023525663.1	1.22e-119	99.44	uncharacterized protein LOC111789201 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022940175.1	7.07e-119	98.89	uncharacterized protein LOC111445881 isoform X1 [Cucurbita moschata]	[more]
KAG7037937.1	7.07e-119	98.89	hypothetical protein SDJN02_01570 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023525664.1	1.38e-118	98.89	uncharacterized protein LOC111789201 isoform X3 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cp4.1LG02g08480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FPT9	3.42e-119	98.89	uncharacterized protein LOC111445881 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1FHQ5	3.86e-118	98.33	uncharacterized protein LOC111445881 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1IWC0	1.90e-116	96.67	uncharacterized protein LOC111481190 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1J4J7	2.14e-115	96.11	uncharacterized protein LOC111481190 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A5A7VE91	4.38e-93	80.56	Large proline-rich protein bag6-B isoform X1 OS=Cucumis melo var. makuwa OX=1194...	[more]

BLAST of Cp4.1LG02g08480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G42220.1	2.3e-27	57.26	Ubiquitin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR15204	LARGE PROLINE-RICH PROTEIN BAG6	coord: 1..113 coord: 112..179
None	No IPR available	PANTHER	PTHR15204:SF5	OS07G0498800 PROTEIN	coord: 1..113 coord: 112..179

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG02g08480.1	Cp4.1LG02g08480.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030433	ubiquitin-dependent ERAD pathway
cellular_component	GO:0071818	BAT3 complex
molecular_function	GO:0051787	misfolded protein binding
molecular_function	GO:0031593	polyubiquitin modification-dependent protein binding