Cp4.1LG02g08180 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTGTAGTCCCTCACGCCATTACTGTCTTCTCTTTTTGTTTTCTCTCTCTCAGGGTTTTCTTCCATTTTTCTTCCTTCATTCTTTGGTTGTTTCTCTTGTTCTTCAATCTTCCGCTTCAATGGCGCAATCCGAGTCTCAGAATGGAGGAGGAGCTGAGAAGACCTTGAGTTTCAAGGCTCTTAAGCCGCAGCTTCTCGTGGAGGTGCCGAAGGCCGCTGATGCCGTCGTGTTTTACAAGGCTGCATTCGGCGCGGAAGAGGTTAGTCGTACTGTGCATCCGAAACGCAAGGCTGAGCAAGAAGCTCCGGCTATCCTTTCCGCCGAGCTCAGCCTTTCTAACTTCTCGTTCCTCGTCTCTGATGTGCTCGACGCTTCTGCTCCTGAGTGAGTCTCTCTCGTTTTCTCCTGCTTTCTTTCTACGTTCGTTTCTTTGATAGAACTGATCAACCAGTCTGTATTACATTTGTTTGTTGTTTTTGTCTGCTTTCCCCATTTCTGAGTTGTGTTTTTTTTTTTTGTCTACTCTTCAATGGTCCCTTTGAAAGATCTGCTCAAGCTCATGGAGCTCTGTTTTTTCCTTGAGTTTATCTGATGCTTAAGCGACATTTCATACGTTTGCTTCGGTATCTGCATGTCTCTTATTCTATGTCATCTAGCAGCTTGTTAATCGTTTTCTTTGCATGGCGTCTGGTTCGATTCTGTGATATTCCGATCGTAGCATACCTATCGTTTCTGATTTTTTTTCTTATTTTGTTTTCAGCGAGAAAGTATTCGAATCAAGAGTTGTGCTGTTCTTGGAAACGGAGGATATTATAGCCGCTGTATCCAAGGCCGTGAGTGCTGGAGCTGTTGAAGAGTCTGAGATTTCAGAAGGCGATGGCTCATACGTCGGCCGTCGCGTTGCTAAGCTGAAGGATCCATTCGGATTCAACTGGATCATCGCTACACCAGCGAAAGAAAGCGCTGTCGTGGAAGCCTAACTTTCTGCGTCTTGCCTAACTTAACCCGCAGTTCTTTCTTTCGATCTCGCAACATTGCTTGTAGGCTCTTAGGATTCGCGAGGCTTTAGTTAGGATGTTTTGAATACGTAGCTCAAGACTGTTGCCTTTCTGTTTGGCATTCTGTGAACGCTTGTGGACGTTTTGGTTATGCTTTTCTTAGTGGCATGCTTCCCCTTGTTTTTTACGCTTCCTTCTCTCAGCATTTAGCCGCTACACATTTCATTTCACTTATTTTGCTTCCAAACTTCGAATAGGAAACTTTGCGGCCTAACCGAGTCTGCGAAGTGTGCCTTTTAATGGATAATGTCGTTAATCCGAGCATGCTTTTTGTTTACACATTCTTCAAGAATGTTTATATTTTTAAAATTAAAATGCTCCATTCTGTGTCAGGAACGAACGGAGGATTTCAAATTGCATCCCGCTTGAAGGTACTTTCTGCTGTTCACAGTCATTGGTGATTGATGAGGTTGAAATCGCACACTTGTCCTTGCGGCAATTTCTTTTGTGGTCCAACAAAAAGGGGCTAGTACGGGATCCCTTGACTTATCGTAATCCGCTGCACGCCGTGCCTGAGATTTTCAGTGGCTTCTCCTACCAAAGGCCATGGACTGATGGTCACTCACTGGAGGCCATTGTTTTATAGCCCACTATTATTCGTCTACTGTGGATTGTTTGGTGAATGGTTTTTATGATAATTTAATTTTGCCGTTGTTAAATTATTCATGTGATTTGGATTTGTTCTTTGTTTCAATTTCACAAATTCCATGTTGGTTTCATCCATTTGGATTTACTTTTTATTTATTTCTTCCCAGTTTTATATTAAAGTGTTCGTTTTATAA TTGTAGTCCCTCACGCCATTACTGTCTTCTCTTTTTGTTTTCTCTCTCTCAGGGTTTTCTTCCATTTTTCTTCCTTCATTCTTTGGTTGTTTCTCTTGTTCTTCAATCTTCCGCTTCAATGGCGCAATCCGAGTCTCAGAATGGAGGAGGAGCTGAGAAGACCTTGAGTTTCAAGGCTCTTAAGCCGCAGCTTCTCGTGGAGGTGCCGAAGGCCGCTGATGCCGTCGTGTTTTACAAGGCTGCATTCGGCGCGGAAGAGGTTAGTCGTACTGTGCATCCGAAACGCAAGGCTGAGCAAGAAGCTCCGGCTATCCTTTCCGCCGAGCTCAGCCTTTCTAACTTCTCGTTCCTCGTCTCTGATGTGCTCGACGCTTCTGCTCCTGACGAGAAAGTATTCGAATCAAGAGTTGTGCTGTTCTTGGAAACGGAGGATATTATAGCCGCTGTATCCAAGGCCGTGAGTGCTGGAGCTGTTGAAGAGTCTGAGATTTCAGAAGGCGATGGCTCATACGTCGGCCGTCGCGTTGCTAAGCTGAAGGATCCATTCGGATTCAACTGGATCATCGCTACACCAGCGAAAGAAAGCGCTGTCGTGGAAGCCTAACTTTCTGCGTCTTGCCTAACTTAACCCGCAGTTCTTTCTTTCGATCTCGCAACATTGCTTGTAGGCTCTTAGGATTCGCGAGGCTTTAGTTAGGATGTTTTGAATACGTAGCTCAAGACTGTTGCCTTTCTGTTTGGCATTCTGTGAACGCTTGTGGACGTTTTGGTTATGCTTTTCTTAGTGGCATGCTTCCCCTTGTTTTTTACGCTTCCTTCTCTCAGCATTTAGCCGCTACACATTTCATTTCACTTATTTTGCTTCCAAACTTCGAATAGGAAACTTTGCGGCCTAACCGAGTCTGCGAAGTGTGCCTTTTAATGGATAATGTCGTTAATCCGAGCATGCTTTTTGTTTACACATTCTTCAAGAATGTTTATATTTTTAAAATTAAAATGCTCCATTCTGTGTCAGGAACGAACGGAGGATTTCAAATTGCATCCCGCTTGAAGGTACTTTCTGCTGTTCACAGTCATTGGTGATTGATGAGGTTGAAATCGCACACTTGTCCTTGCGGCAATTTCTTTTGTGGTCCAACAAAAAGGGGCTAGTACGGGATCCCTTGACTTATCGTAATCCGCTGCACGCCGTGCCTGAGATTTTCAGTGGCTTCTCCTACCAAAGGCCATGGACTGATGGTCACTCACTGGAGGCCATTGTTTTATAGCCCACTATTATTCGTCTACTGTGGATTGTTTGGTGAATGGTTTTTATGATAATTTAATTTTGCCGTTGTTAAATTATTCATGTGATTTGGATTTGTTCTTTGTTTCAATTTCACAAATTCCATGTTGGTTTCATCCATTTGGATTTACTTTTTATTTATTTCTTCCCAGTTTTATATTAAAGTGTTCGTTTTATAA ATGGCGCAATCCGAGTCTCAGAATGGAGGAGGAGCTGAGAAGACCTTGAGTTTCAAGGCTCTTAAGCCGCAGCTTCTCGTGGAGGTGCCGAAGGCCGCTGATGCCGTCGTGTTTTACAAGGCTGCATTCGGCGCGGAAGAGGTTAGTCGTACTGTGCATCCGAAACGCAAGGCTGAGCAAGAAGCTCCGGCTATCCTTTCCGCCGAGCTCAGCCTTTCTAACTTCTCGTTCCTCGTCTCTGATGTGCTCGACGCTTCTGCTCCTGACGAGAAAGTATTCGAATCAAGAGTTGTGCTGTTCTTGGAAACGGAGGATATTATAGCCGCTGTATCCAAGGCCGTGAGTGCTGGAGCTGTTGAAGAGTCTGAGATTTCAGAAGGCGATGGCTCATACGTCGGCCGTCGCGTTGCTAAGCTGAAGGATCCATTCGGATTCAACTGGATCATCGCTACACCAGCGAAAGAAAGCGCTGTCGTGGAAGCCTAA MAQSESQNGGGAEKTLSFKALKPQLLVEVPKAADAVVFYKAAFGAEEVSRTVHPKRKAEQEAPAILSAELSLSNFSFLVSDVLDASAPDEKVFESRVVLFLETEDIIAAVSKAVSAGAVEESEISEGDGSYVGRRVAKLKDPFGFNWIIATPAKESAVVEA Homology
BLAST of Cp4.1LG02g08180 vs. ExPASy Swiss-Prot
Match: Q9LV66 (Uncharacterized protein At5g48480 OS=Arabidopsis thaliana OX=3702 GN=At5g48480 PE=1 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 1.5e-19 Identity = 71/158 (44.94%), Postives = 95/158 (60.13%), Query Frame = 0
BLAST of Cp4.1LG02g08180 vs. NCBI nr
Match: XP_023525296.1 (uncharacterized protein At5g48480 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 303 bits (777), Expect = 1.25e-103 Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0
BLAST of Cp4.1LG02g08180 vs. NCBI nr
Match: KAG6608610.1 (hypothetical protein SDJN03_01952, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037927.1 hypothetical protein SDJN02_01559 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 300 bits (769), Expect = 2.08e-102 Identity = 160/161 (99.38%), Postives = 160/161 (99.38%), Query Frame = 0
BLAST of Cp4.1LG02g08180 vs. NCBI nr
Match: XP_022941068.1 (uncharacterized protein At5g48480 [Cucurbita moschata]) HSP 1 Score: 298 bits (763), Expect = 1.71e-101 Identity = 159/161 (98.76%), Postives = 159/161 (98.76%), Query Frame = 0
BLAST of Cp4.1LG02g08180 vs. NCBI nr
Match: XP_022982453.1 (uncharacterized protein At5g48480 [Cucurbita maxima]) HSP 1 Score: 294 bits (752), Expect = 8.14e-100 Identity = 156/161 (96.89%), Postives = 157/161 (97.52%), Query Frame = 0
BLAST of Cp4.1LG02g08180 vs. NCBI nr
Match: XP_022136491.1 (uncharacterized protein At5g48480 [Momordica charantia]) HSP 1 Score: 247 bits (630), Expect = 3.20e-81 Identity = 132/161 (81.99%), Postives = 141/161 (87.58%), Query Frame = 0
BLAST of Cp4.1LG02g08180 vs. ExPASy TrEMBL
Match: A0A6J1FR21 (uncharacterized protein At5g48480 OS=Cucurbita moschata OX=3662 GN=LOC111446465 PE=4 SV=1) HSP 1 Score: 298 bits (763), Expect = 8.29e-102 Identity = 159/161 (98.76%), Postives = 159/161 (98.76%), Query Frame = 0
BLAST of Cp4.1LG02g08180 vs. ExPASy TrEMBL
Match: A0A6J1J4V4 (uncharacterized protein At5g48480 OS=Cucurbita maxima OX=3661 GN=LOC111481272 PE=4 SV=1) HSP 1 Score: 294 bits (752), Expect = 3.94e-100 Identity = 156/161 (96.89%), Postives = 157/161 (97.52%), Query Frame = 0
BLAST of Cp4.1LG02g08180 vs. ExPASy TrEMBL
Match: A0A6J1C3N1 (uncharacterized protein At5g48480 OS=Momordica charantia OX=3673 GN=LOC111008159 PE=4 SV=1) HSP 1 Score: 247 bits (630), Expect = 1.55e-81 Identity = 132/161 (81.99%), Postives = 141/161 (87.58%), Query Frame = 0
BLAST of Cp4.1LG02g08180 vs. ExPASy TrEMBL
Match: A0A0A0LH73 (VOC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G874350 PE=4 SV=1) HSP 1 Score: 221 bits (563), Expect = 2.32e-71 Identity = 120/160 (75.00%), Postives = 133/160 (83.12%), Query Frame = 0
BLAST of Cp4.1LG02g08180 vs. ExPASy TrEMBL
Match: A0A5D3E723 (Lactoylglutathione lyase / glyoxalase I family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007810 PE=4 SV=1) HSP 1 Score: 221 bits (563), Expect = 2.39e-71 Identity = 120/160 (75.00%), Postives = 133/160 (83.12%), Query Frame = 0
BLAST of Cp4.1LG02g08180 vs. TAIR 10
Match: AT5G48480.1 (Lactoylglutathione lyase / glyoxalase I family protein ) HSP 1 Score: 97.4 bits (241), Expect = 1.1e-20 Identity = 71/158 (44.94%), Postives = 95/158 (60.13%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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