Cp4.1LG02g07800 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG02g07800
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Thioredoxin
Location	Cp4.1LG02: 505349 .. 506763 (+)
RNA-Seq Expression	Cp4.1LG02g07800
Synteny	Cp4.1LG02g07800

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAACCGCAAAAATTCGATGCTCTTCTCTCTTTCCGATTATGCCTTAGTTGTATTTGATCTGTCGAAACGCACTCCCATCGTCGAGCGTTGGAAGGAAATTTGTTCAGATTCTTGAAGATGAGAAAGCGGAGCGCTCGTAGGCTGCCGGATGGTTCGATATGCGCCGCAAATGGGGTTTTGCTGCTTGCACGTTCAATTCCTTGTCTTCTTTTACTACTACTACTACTACTATAAATTGAGACGATCGGGTTTGTATTATTCAATTTCATCATTTGGCAACGATCTTACGAGAGGAAGCTCTTACAACTTGAGATTCTATCTGCTTTTGTTTTTTAAGATCGATAATGGCGGGAAAGGGCGAAGTGATTGCGTGCCATACCGTTGGATCATGGAAGCAGCAGATCCTCAAAGGAAAACAATCCAATAAACTGGTACTGTTTGATCTGAAATCTATTAGTTTCGTGTTGTTCTTCCTCTTCCTTATAAGCGTTTGTCTTCCTCTTTCTAAACAATTTTGATTCTGCAGATTGTTGTGGACTTCACTGCCGCATGGTGCGGTCCGTGCCGTGCCATGGCTCCAGTTTTTGCAGAGTTGGCTAAGAAGATGAGTAATGTCATATTCTTGAAAGTCGATGTTGATGAATTGATGGTAAGTTGATTCAAGCCCTGCCTTGCAAAACTTTGATACTGTTAATTGAGAAATATTGTTTAGACGTAAAACGAAACGAATTCTTTTCTGCAGGCTGTTGCGGCGGAATGGGGAGTGAGTGCACTCCCTTGCTTCATGTTCTTGAAGAATGGGAAGGTGGTGGACAGGTTTGTAGGCGCAAGAAAAGATCAGTTGCAGAAGATTGTATTACAGAATGCCTAATGGAAACTCTACGTTGGGGAGATTCCCTCATCTGTTCTTTGGAATTTCATTGGAAGAGACAAAATTTTGTGCAACTTTTGTGAGTTGCTATTAGTTGATGCTTTTAGTTTGAACAATTTTTTCCTTCTTGTGTTTGATTGTTTTTCAATCAGTTTACTATTACGAGACTATGTAATCAATGAACATCTATTCTTTTGTTGAATAAAAATGAGTTGCTGAATACATCATCAGCAGTTTCTCTATCTGCTTGTTTCATTGAATCATATCATGCTTGAACAATTCAACTTGCAGCTAGGTTTAAATTTCATCTTACAGATTCAGCTAAGACACTAATGAAGACACTAACTAACGAAATAATTGTAAGAGATTCGTTCTCTTCTCCATCGATGTGGGATGTCACAATCCACCCCCTTTGGAGGCCCCAACGTCCTCGTTGGTAGCCATTCGGTGTCTGGTGATGCCATTTGTAACAATCCAAGCCCACCATTAGCAAATATTGTCCGTTTGGTCAATTATGTATCGCCGTCAGCCTCACGATTTTAA

mRNA sequence

TAAACCGCAAAAATTCGATGCTCTTCTCTCTTTCCGATTATGCCTTAGTTGTATTTGATCTGTCGAAACGCACTCCCATCGTCGAGCGTTGGAAGGAAATTTGTTCAGATTCTTGAAGATGAGAAAGCGGAGCGCTCGTAGGCTGCCGGATGGTTCGATATGCGCCGCAAATGGGGTTTTGCTGCTTGCACGTTCAATTCCTTGTCTTCTTTTACTACTACTACTACTACTATAAATTGAGACGATCGGATCGATAATGGCGGGAAAGGGCGAAGTGATTGCGTGCCATACCGTTGGATCATGGAAGCAGCAGATCCTCAAAGGAAAACAATCCAATAAACTGATTGTTGTGGACTTCACTGCCGCATGGTGCGGTCCGTGCCGTGCCATGGCTCCAGTTTTTGCAGAGTTGGCTAAGAAGATGAGTAATGTCATATTCTTGAAAGTCGATGTTGATGAATTGATGGCTGTTGCGGCGGAATGGGGAGTGAGTGCACTCCCTTGCTTCATGTTCTTGAAGAATGGGAAGGTGGTGGACAGGTTTGTAGGCGCAAGAAAAGATCAGTTGCAGAAGATTGTATTACAGAATGCCTAATGGAAACTCTACGTTGGGGAGATTCCCTCATCTGTTCTTTGGAATTTCATTGGAAGAGACAAAATTTTGTGCAACTTTTGTGAGTTGCTATTAGTTGATGCTTTTAGTTTGAACAATTTTTTCCTTCTTGTGTTTGATTGTTTTTCAATCAGTTTACTATTACGAGACTATGTAATCAATGAACATCTATTCTTTTGTTGAATAAAAATGAGTTGCTGAATACATCATCAGCAGTTTCTCTATCTGCTTGTTTCATTGAATCATATCATGCTTGAACAATTCAACTTGCAGCTAGGTTTAAATTTCATCTTACAGATTCAGCTAAGACACTAATGAAGACACTAACTAACGAAATAATTGTAAGAGATTCGTTCTCTTCTCCATCGATGTGGGATGTCACAATCCACCCCCTTTGGAGGCCCCAACGTCCTCGTTGGTAGCCATTCGGTGTCTGGTGATGCCATTTGTAACAATCCAAGCCCACCATTAGCAAATATTGTCCGTTTGGTCAATTATGTATCGCCGTCAGCCTCACGATTTTAA

Coding sequence (CDS)

ATGGCGGGAAAGGGCGAAGTGATTGCGTGCCATACCGTTGGATCATGGAAGCAGCAGATCCTCAAAGGAAAACAATCCAATAAACTGATTGTTGTGGACTTCACTGCCGCATGGTGCGGTCCGTGCCGTGCCATGGCTCCAGTTTTTGCAGAGTTGGCTAAGAAGATGAGTAATGTCATATTCTTGAAAGTCGATGTTGATGAATTGATGGCTGTTGCGGCGGAATGGGGAGTGAGTGCACTCCCTTGCTTCATGTTCTTGAAGAATGGGAAGGTGGTGGACAGGTTTGTAGGCGCAAGAAAAGATCAGTTGCAGAAGATTGTATTACAGAATGCCTAA

Protein sequence

MAGKGEVIACHTVGSWKQQILKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQLQKIVLQNA

Homology

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BLAST of Cp4.1LG02g07800 vs. ExPASy Swiss-Prot
Match: P29448 (Thioredoxin H1 OS=Arabidopsis thaliana OX=3702 GN=TRX1 PE=1 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 2.8e-36
Identity = 63/108 (58.33%), Postives = 88/108 (81.48%), Query Frame = 0


Query: 4   KGEVIACHTVGSWKQQILKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVIFLK 63
           +G+VIACHTV +W +Q+ K  +S  L+VVDFTA+WCGPCR +AP FA+LAKK+ NV+FLK
Sbjct: 5   EGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLK 64

Query: 64  VDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQLQKIVLQN 112
           VD DEL +VA++W + A+P FMFLK GK++D+ VGA+KD+LQ  + ++
Sbjct: 65  VDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKH 112

[Close]

BLAST of Cp4.1LG02g07800 vs. ExPASy Swiss-Prot
Match: Q43636 (Thioredoxin H-type OS=Ricinus communis OX=3988 PE=3 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 1.4e-35
Identity = 66/110 (60.00%), Postives = 86/110 (78.18%), Query Frame = 0


Query: 2   AGKGEVIACHTVGSWKQQILKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVIF 61
           A +G+VI CHTV +W +Q+ KG  +  LIVVDFTA+WCGPCR +AP  AELAKK+ NV F
Sbjct: 3   AEEGQVIGCHTVEAWNEQLQKGNDTKGLIVVDFTASWCGPCRFIAPFLAELAKKLPNVTF 62

Query: 62  LKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQLQKIVLQN 112
           LKVDVDEL  VA EW V ++P FMFLK GK++D+ VGA+KD+LQ+ + ++
Sbjct: 63  LKVDVDELKTVAHEWAVESMPTFMFLKEGKIMDKVVGAKKDELQQTIAKH 112

[Close]

BLAST of Cp4.1LG02g07800 vs. ExPASy Swiss-Prot
Match: P29449 (Thioredoxin H-type 1 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.2e-34
Identity = 62/109 (56.88%), Postives = 87/109 (79.82%), Query Frame = 0


Query: 4   KGEVIACHTVGSWKQQILKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVIFLK 63
           +G+V  CH V  W +   KG ++ KL+VVDFTA+WCGPCR +AP+ A++AKKM +VIFLK
Sbjct: 11  EGQVFGCHKVEEWNEYFKKGVETKKLVVVDFTASWCGPCRFIAPILADIAKKMPHVIFLK 70

Query: 64  VDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQLQKIVLQNA 113
           VDVDEL  V+AEW V A+P F+F+K+GK VDR VGA+K++LQ+ ++++A
Sbjct: 71  VDVDELKTVSAEWSVEAMPTFVFIKDGKEVDRVVGAKKEELQQTIVKHA 119

[Close]

BLAST of Cp4.1LG02g07800 vs. ExPASy Swiss-Prot
Match: Q39241 (Thioredoxin H5 OS=Arabidopsis thaliana OX=3702 GN=TRX5 PE=1 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 2.0e-34
Identity = 62/111 (55.86%), Postives = 88/111 (79.28%), Query Frame = 0


Query: 1   MAGKGEVIACHTVGSWKQQILKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVI 60
           MAG+GEVIACHT+  W +++    +S KLIV+DFTA+WC PCR +APVFAE+AKK +NV+
Sbjct: 1   MAGEGEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVV 60

Query: 61  FLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQLQKIVLQN 112
           F K+DVDEL AVA E+ V A+P F+F+K G ++DR VGA KD++ + ++++
Sbjct: 61  FFKIDVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKH 111

[Close]

BLAST of Cp4.1LG02g07800 vs. ExPASy Swiss-Prot
Match: Q07090 (Thioredoxin H-type 2 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 2.6e-34
Identity = 65/111 (58.56%), Postives = 85/111 (76.58%), Query Frame = 0


Query: 1   MAGKGEVIACHTVGSWKQQILKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVI 60
           MA +G+VI  HTV +W + + KG    KLIVVDFTA+WCGPC+ +A  +AELAKKM  V 
Sbjct: 1   MAEEGQVIGVHTVDAWNEHLQKGIDDKKLIVVDFTASWCGPCKFIASFYAELAKKMPTVT 60

Query: 61  FLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQLQKIVLQN 112
           FLKVDVDEL +VA +W V A+P FMFLK GK+VD+ VGA+KD+LQ+ + ++
Sbjct: 61  FLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKDELQQTIAKH 111

[Close]

BLAST of Cp4.1LG02g07800 vs. NCBI nr
Match: XP_023525273.1 (thioredoxin H1-like [Cucurbita pepo subsp. pepo] >XP_023525274.1 thioredoxin H1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 229 bits (585), Expect = 6.20e-76
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MAGKGEVIACHTVGSWKQQILKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVI 60
           MAGKGEVIACHTVGSWKQQILKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVI
Sbjct: 1   MAGKGEVIACHTVGSWKQQILKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVI 60

Query: 61  FLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQLQKIVLQNA 112
           FLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQLQKIVLQNA
Sbjct: 61  FLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQLQKIVLQNA 112

[Close]

BLAST of Cp4.1LG02g07800 vs. NCBI nr
Match: KAG7037881.1 (Thioredoxin H1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 226 bits (575), Expect = 2.08e-74
Identity = 110/112 (98.21%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   MAGKGEVIACHTVGSWKQQILKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVI 60
           MAGKGEVIAC TVGSWKQQ+LKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVI
Sbjct: 1   MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVI 60

Query: 61  FLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQLQKIVLQNA 112
           FLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQLQKIVLQNA
Sbjct: 61  FLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQLQKIVLQNA 112

[Close]

BLAST of Cp4.1LG02g07800 vs. NCBI nr
Match: XP_022982430.1 (thioredoxin H1-like [Cucurbita maxima] >XP_022982431.1 thioredoxin H1-like [Cucurbita maxima])

HSP 1 Score: 225 bits (574), Expect = 2.96e-74
Identity = 109/112 (97.32%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MAGKGEVIACHTVGSWKQQILKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVI 60
           MAGKGEVIACHTVGSWKQQ+LKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKK+SNVI
Sbjct: 1   MAGKGEVIACHTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKISNVI 60

Query: 61  FLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQLQKIVLQNA 112
           FLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQLQKIVLQ+A
Sbjct: 61  FLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQLQKIVLQHA 112

[Close]

BLAST of Cp4.1LG02g07800 vs. NCBI nr
Match: KAG6608561.1 (Thioredoxin H1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 226 bits (575), Expect = 6.59e-74
Identity = 110/112 (98.21%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   MAGKGEVIACHTVGSWKQQILKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVI 60
           MAGKGEVIAC TVGSWKQQ+LKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVI
Sbjct: 36  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVI 95

Query: 61  FLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQLQKIVLQNA 112
           FLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQLQKIVLQNA
Sbjct: 96  FLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQLQKIVLQNA 147

[Close]

BLAST of Cp4.1LG02g07800 vs. NCBI nr
Match: XP_022941032.1 (thioredoxin H1-like [Cucurbita moschata])

HSP 1 Score: 224 bits (571), Expect = 1.07e-73
Identity = 109/112 (97.32%), Postives = 110/112 (98.21%), Query Frame = 0


Query: 1   MAGKGEVIACHTVGSWKQQILKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVI 60
           MAGKGEVIAC TVGSWKQQ+LKGKQSNKLIVVDFTA WCGPCRAMAPVFAELAKKMSNVI
Sbjct: 8   MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTATWCGPCRAMAPVFAELAKKMSNVI 67

Query: 61  FLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQLQKIVLQNA 112
           FLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQLQKIVLQNA
Sbjct: 68  FLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQLQKIVLQNA 119

[Close]

BLAST of Cp4.1LG02g07800 vs. ExPASy TrEMBL
Match: A0A6J1IZB4 (thioredoxin H1-like OS=Cucurbita maxima OX=3661 GN=LOC111481260 PE=4 SV=1)

HSP 1 Score: 225 bits (574), Expect = 1.43e-74
Identity = 109/112 (97.32%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MAGKGEVIACHTVGSWKQQILKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVI 60
           MAGKGEVIACHTVGSWKQQ+LKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKK+SNVI
Sbjct: 1   MAGKGEVIACHTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKISNVI 60

Query: 61  FLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQLQKIVLQNA 112
           FLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQLQKIVLQ+A
Sbjct: 61  FLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQLQKIVLQHA 112

[Close]

BLAST of Cp4.1LG02g07800 vs. ExPASy TrEMBL
Match: A0A6J1FL98 (thioredoxin H1-like OS=Cucurbita moschata OX=3662 GN=LOC111446441 PE=4 SV=1)

HSP 1 Score: 224 bits (571), Expect = 5.16e-74
Identity = 109/112 (97.32%), Postives = 110/112 (98.21%), Query Frame = 0


Query: 1   MAGKGEVIACHTVGSWKQQILKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVI 60
           MAGKGEVIAC TVGSWKQQ+LKGKQSNKLIVVDFTA WCGPCRAMAPVFAELAKKMSNVI
Sbjct: 8   MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTATWCGPCRAMAPVFAELAKKMSNVI 67

Query: 61  FLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQLQKIVLQNA 112
           FLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQLQKIVLQNA
Sbjct: 68  FLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQLQKIVLQNA 119

[Close]

BLAST of Cp4.1LG02g07800 vs. ExPASy TrEMBL
Match: A0A6J1DWZ0 (thioredoxin H1-like OS=Momordica charantia OX=3673 GN=LOC111025278 PE=4 SV=1)

HSP 1 Score: 202 bits (513), Expect = 2.89e-65
Identity = 96/112 (85.71%), Postives = 104/112 (92.86%), Query Frame = 0


Query: 1   MAGKGEVIACHTVGSWKQQILKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVI 60
           M  K EVIACHTVGSWKQQ+LKGKQSNKLIVVDFTAAWCGPCRAMAP+FAELA KMS+VI
Sbjct: 1   MVDKREVIACHTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPLFAELANKMSSVI 60

Query: 61  FLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQLQKIVLQNA 112
           FLKVDVDEL  VAAEWGVSALPCF+FLKNG +VDRFVGAR+D LQKI+LQ+A
Sbjct: 61  FLKVDVDELTTVAAEWGVSALPCFVFLKNGNLVDRFVGARRDVLQKIILQHA 112

[Close]

BLAST of Cp4.1LG02g07800 vs. ExPASy TrEMBL
Match: A0A6J1IM69 (thioredoxin H-type-like OS=Cucurbita maxima OX=3661 GN=LOC111476523 PE=4 SV=1)

HSP 1 Score: 199 bits (507), Expect = 2.38e-64
Identity = 97/112 (86.61%), Postives = 101/112 (90.18%), Query Frame = 0


Query: 1   MAGKGEVIACHTVGSWKQQILKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVI 60
           MA    VI CHTVGSWKQQ+LKGKQSNKLIVVDFTAAWCGPCRA+AP FAELAKKMSNVI
Sbjct: 1   MAENSGVITCHTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAIAPAFAELAKKMSNVI 60

Query: 61  FLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQLQKIVLQNA 112
           FLKVDVD+L  VAAEWGV ALPCFMFLKNGKVV RFVGARKD LQKIVLQ+A
Sbjct: 61  FLKVDVDKLNTVAAEWGVGALPCFMFLKNGKVVARFVGARKDALQKIVLQHA 112

[Close]

BLAST of Cp4.1LG02g07800 vs. ExPASy TrEMBL
Match: A0A5A7V9W3 (Thioredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold556G00080 PE=3 SV=1)

HSP 1 Score: 195 bits (496), Expect = 1.13e-62
Identity = 93/112 (83.04%), Postives = 102/112 (91.07%), Query Frame = 0


Query: 1   MAGKGEVIACHTVGSWKQQILKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVI 60
           MA K +VI CHTV SWKQQ+LKGKQS+KLIVVDFTAAWCGPCRA+APVF ELA+KMSNVI
Sbjct: 1   MAEKSQVITCHTVQSWKQQLLKGKQSDKLIVVDFTAAWCGPCRAIAPVFVELAEKMSNVI 60

Query: 61  FLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQLQKIVLQNA 112
           FLKVDVD+L  VAAEWGVSALPCFMFLKNG VVDRFVGARKD L+K+VL +A
Sbjct: 61  FLKVDVDKLTTVAAEWGVSALPCFMFLKNGNVVDRFVGARKDALRKLVLHHA 112

[Close]

BLAST of Cp4.1LG02g07800 vs. TAIR 10
Match: AT3G51030.1 (thioredoxin H-type 1 )

HSP 1 Score: 152.5 bits (384), Expect = 2.0e-37
Identity = 63/108 (58.33%), Postives = 88/108 (81.48%), Query Frame = 0


Query: 4   KGEVIACHTVGSWKQQILKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVIFLK 63
           +G+VIACHTV +W +Q+ K  +S  L+VVDFTA+WCGPCR +AP FA+LAKK+ NV+FLK
Sbjct: 5   EGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLK 64

Query: 64  VDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQLQKIVLQN 112
           VD DEL +VA++W + A+P FMFLK GK++D+ VGA+KD+LQ  + ++
Sbjct: 65  VDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKH 112

[Close]

BLAST of Cp4.1LG02g07800 vs. TAIR 10
Match: AT1G45145.1 (thioredoxin H-type 5 )

HSP 1 Score: 146.4 bits (368), Expect = 1.4e-35
Identity = 62/111 (55.86%), Postives = 88/111 (79.28%), Query Frame = 0


Query: 1   MAGKGEVIACHTVGSWKQQILKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVI 60
           MAG+GEVIACHT+  W +++    +S KLIV+DFTA+WC PCR +APVFAE+AKK +NV+
Sbjct: 1   MAGEGEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVV 60

Query: 61  FLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQLQKIVLQN 112
           F K+DVDEL AVA E+ V A+P F+F+K G ++DR VGA KD++ + ++++
Sbjct: 61  FFKIDVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKH 111

[Close]

BLAST of Cp4.1LG02g07800 vs. TAIR 10
Match: AT1G19730.1 (Thioredoxin superfamily protein )

HSP 1 Score: 137.5 bits (345), Expect = 6.6e-33
Identity = 64/111 (57.66%), Postives = 86/111 (77.48%), Query Frame = 0


Query: 2   AGKGEVIACHTVGSWKQQILKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKK-MSNVI 61
           A +G+VI CHT   W  Q+ K K+SNKLIV+DFTA+WC PCR +AP+F +LAKK MS+ I
Sbjct: 3   AEEGQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAI 62

Query: 62  FLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQLQKIVLQN 112
           F KVDVDEL +VA E+GV A+P F+F+K G+VVD+ VGA K+ LQ  ++++
Sbjct: 63  FFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKH 113

[Close]

BLAST of Cp4.1LG02g07800 vs. TAIR 10
Match: AT5G42980.1 (thioredoxin 3 )

HSP 1 Score: 130.6 bits (327), Expect = 8.0e-31
Identity = 58/104 (55.77%), Postives = 78/104 (75.00%), Query Frame = 0


Query: 1   MAGKGEVIACHTVGSWKQQILKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVI 60
           MA +GEVIACHTV  W +++    +S KLIV+DFTA WC PCR +APVFA+LAKK  +V+
Sbjct: 1   MAAEGEVIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVV 60

Query: 61  FLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQL 105
           F KVDVDEL  VA E+ V A+P F+F+K G++ +  VGA K+++
Sbjct: 61  FFKVDVDELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEI 104

[Close]

BLAST of Cp4.1LG02g07800 vs. TAIR 10
Match: AT3G17880.1 (tetraticopeptide domain-containing thioredoxin )

HSP 1 Score: 110.9 bits (276), Expect = 6.6e-25
Identity = 46/108 (42.59%), Postives = 77/108 (71.30%), Query Frame = 0


Query: 5   GEVIACHTVGSWKQQILKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVIFLKV 64
           GEVI+ H+    + +    K++++L+++ FTA WCGPCR M+P+++ LA + S V+FLKV
Sbjct: 270 GEVISIHSTSELEAKTKAAKKASRLLILYFTATWCGPCRYMSPLYSNLATQHSRVVFLKV 329

Query: 65  DVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQLQKIVLQNA 113
           D+D+   VAA W +S++P F F+++GK VD+ VGA K  L++ + Q++
Sbjct: 330 DIDKANDVAASWNISSVPTFCFIRDGKEVDKVVGADKGSLEQKIAQHS 377

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g07800 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P29448	2.8e-36	58.33	Thioredoxin H1 OS=Arabidopsis thaliana OX=3702 GN=TRX1 PE=1 SV=1	[more]
Q43636	1.4e-35	60.00	Thioredoxin H-type OS=Ricinus communis OX=3988 PE=3 SV=1	[more]
P29449	1.2e-34	56.88	Thioredoxin H-type 1 OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
Q39241	2.0e-34	55.86	Thioredoxin H5 OS=Arabidopsis thaliana OX=3702 GN=TRX5 PE=1 SV=1	[more]
Q07090	2.6e-34	58.56	Thioredoxin H-type 2 OS=Nicotiana tabacum OX=4097 PE=3 SV=1	[more]

BLAST of Cp4.1LG02g07800 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023525273.1	6.20e-76	100.00	thioredoxin H1-like [Cucurbita pepo subsp. pepo] >XP_023525274.1 thioredoxin H1-...	[more]
KAG7037881.1	2.08e-74	98.21	Thioredoxin H1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022982430.1	2.96e-74	97.32	thioredoxin H1-like [Cucurbita maxima] >XP_022982431.1 thioredoxin H1-like [Cucu...	[more]
KAG6608561.1	6.59e-74	98.21	Thioredoxin H1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022941032.1	1.07e-73	97.32	thioredoxin H1-like [Cucurbita moschata]	[more]

BLAST of Cp4.1LG02g07800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IZB4	1.43e-74	97.32	thioredoxin H1-like OS=Cucurbita maxima OX=3661 GN=LOC111481260 PE=4 SV=1	[more]
A0A6J1FL98	5.16e-74	97.32	thioredoxin H1-like OS=Cucurbita moschata OX=3662 GN=LOC111446441 PE=4 SV=1	[more]
A0A6J1DWZ0	2.89e-65	85.71	thioredoxin H1-like OS=Momordica charantia OX=3673 GN=LOC111025278 PE=4 SV=1	[more]
A0A6J1IM69	2.38e-64	86.61	thioredoxin H-type-like OS=Cucurbita maxima OX=3661 GN=LOC111476523 PE=4 SV=1	[more]
A0A5A7V9W3	1.13e-62	83.04	Thioredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold556G00080 PE...	[more]

BLAST of Cp4.1LG02g07800 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51030.1	2.0e-37	58.33	thioredoxin H-type 1	[more]
AT1G45145.1	1.4e-35	55.86	thioredoxin H-type 5	[more]
AT1G19730.1	6.6e-33	57.66	Thioredoxin superfamily protein	[more]
AT5G42980.1	8.0e-31	55.77	thioredoxin 3	[more]
AT3G17880.1	6.6e-25	42.59	tetraticopeptide domain-containing thioredoxin	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 30..38 score: 51.98 coord: 77..88 score: 31.9 coord: 38..47 score: 64.83
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 1..111 e-value: 4.9E-39 score: 135.1
None	No IPR available	PANTHER	PTHR10438:SF431	THIOREDOXIN	coord: 1..111
None	No IPR available	PANTHER	PTHR10438	THIOREDOXIN	coord: 1..111
None	No IPR available	CDD	cd02947	TRX_family	coord: 25..108 e-value: 2.10138E-37 score: 119.97
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 9..108 e-value: 2.6E-29 score: 101.3
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 1..112 score: 13.871855
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 31..49
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 5..110

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG02g07800.1	Cp4.1LG02g07800.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006662	glycerol ether metabolic process
molecular_function	GO:0015035	protein-disulfide reductase activity