Cp4.1LG02g07170 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG02g07170
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionHomeodomain-like superfamily protein
LocationCp4.1LG02: 772129 .. 774546 (-)
RNA-Seq ExpressionCp4.1LG02g07170
SyntenyCp4.1LG02g07170
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACAAGACGCCATTACATCTCTCTGTCTCTCTTGCCCTCTCTTTCTTCTCCTTAAGCTTTATTCTTAAAAGGATAACAACATCTTCTCTCTTTCTCTTCTGCTCTTCTGCCCTTAACCTTTTCTTCCGTTCACTCCTCTTCTTAATACATCCAATATATGTTACTCATTCCTTTTCCTCTTCAAATCATAACCCACTCATTACCCTTTAAACCACTCATCTTTTTGTCACTCTTCTCTCATGAACCCGCCGGACCTCTCCTTGCACATCAGCCTCCCCTTCTTCGCCCCGCCCTCTCACAATTCTGACTTCACCCATCAAAATGGTTGCTTCCACTTTGGATATCAACCAGCCCATGTGGCTCGTCCTCGTCACCAAGCTTATAATCTCCTCCATGGCCGACGCCGTGACTTTAAACCAACTGTTGGTGGGTGTGGAGTGAGAAGAAGCATCCGAGCTCCTAGAATGAGATGGACTACGACGCTACATGCTCATTTTGTACACGCTGTTCAGCTTCTTGGCGGCCATGAAAGTAATTCCACAACAAAACCAATAACCTTAAACACATCAAAACTTTCATTTGTTCCATTAATTAATACCCATTTTTGTATCTGTCTCAGGAGCTACACCAAAATCAGTATTGGAGCTTATGAATGTCAAGGATCTAACCCTAGCTCATGTCAAAAGCCATTTGCAGGTACTTTCATTGTTTTATCTTCCCAATCAATTCTATGATATTGTCTATTTTATGCATAAATTCTCCTAATTTTATTTTTTTTATTATTTTTTTTATTTTCCCAAAAGGTCTCAAGATTTCTCCCTCTTCTTTTAGCATATCTTCTCTCGTTCATCAAAAAATTGCTCTCGATAGGATTAGTTTACTCATATTCTCGTATAACTTCTATCGTCTCGTTTATTGTGGTTCCTCGATCCTGCTAGTCATTTGCTTGTTCAAACCGTACATATTCAAAAAGGGGACAAGCTAAACAAACAAGCCATACCAATTTATAGAGTCAGAAGTCCGAAAGCACTCTGAGGTCTTAAGTAGGGTTAGGGAGTCAAATGAGCCTATTCCTCTAGCCTATGATTGTGGGTCGATTCGGCTATCGATTCCTGCATCTCCATGGGAGCACCGTGAGAAGGAGCTAATGATTCGGTTGTGGCTACTAAGCTATTGATAAGAGTTTTGGAGTCTAGTTTTTAGGTGGAGTTAATGATTTGGGAACATGTGGGTTGAAAGAGGTTGTTTTTGTCACATAATATTAATCTTATTCGCATAAAACATAACATTTTTGAAGATTAATTGATATGAGATGGGGGAGTAAAAGAGAGAGTACAAAAGTGAAAGGACAAAAAAGCATCTAAAATTACATCAACTACAACGCAAGGCTGTTAAAAAGAAAAAGGGTTTTTGGTTTGTTGTGGATGCAGATGTTCCGAACAGTGAAGAACAGTGTGAAGAAGGGAACAGGTAATAAATAAAAAACACTGTCTGTTCTTTAATGCAAACACTGTTCTTCTTCCTCACTTCTTCAGATCTGAAAATTCAAAAAAGCTTCATGTTTTTTTGTTGCAGACGATTATGGAAGGCCTGAGATTGAAGCAGATGGGGTTTTATCTTCTTCTTCTTCTTCTCCTTCTTCTTCTTCTTCTTCTTCTTCATCTCTTCAAAAATCTAACTTTCACACAGTCAAACCGTGAGTTCATCTTTCATTTGCTTCTTTTACTGTGTTTTTTTACTGTGTTTTAGACCCATAAACTCATCTTCTTTTACTGTGTGCAGAGGCAATAGTTGCGAGAGAACCACCTCAAACGGTGACGTTTTGCAAAGGATTAATTTAGAGTTCACTCTTGGAAGACCATGGGGATGCAAATAATAATAAAAAGTTAAAATAAAATCTTATTATTTATTATTGTATTAAGAAAATATCAACAGAAATGAATGTGAGGAATGAAGATGCTCCTACATGCCCATTTCTTGCCCATCTTGACCCTTCAGGTGCTCATCGCCTTCACTCCCGCACTCTTGCAGCACAATGGCTAGCAATGGCTCTACACACTGGCTATAACCATGCCTTCTTAACCCATGAGTCTGCCCTCAAATTTTCACTACTTCTAGTTACTGAATTTATTTCGTTATTAAGTAACTAAATTTCCTCGATCTCGTGCTATCGTTACGGTCATGCTCGCTATAAATTTTAACATTCAAGTGGTTGTCGTGTTTCTTAAAAGGTTAAGTATCTGTAAATTACTTTATACTGAGTTATTTGACTCTCCAGCATGGATGAATTGGTTTACCATACTAATTACTAACTAGAGATCATTTTCATTTTAGTTTCTCGTACTTTCATTTCTTTTACGGTTTAATGGTTACAGATCATGCACTAATTTCTATTCAATATAAGTTTTCATTTTATTAG

mRNA sequence

ACAAGACGCCATTACATCTCTCTGTCTCTCTTGCCCTCTCTTTCTTCTCCTTAAGCTTTATTCTTAAAAGGATAACAACATCTTCTCTCTTTCTCTTCTGCTCTTCTGCCCTTAACCTTTTCTTCCGTTCACTCCTCTTCTTAATACATCCAATATATGTTACTCATTCCTTTTCCTCTTCAAATCATAACCCACTCATTACCCTTTAAACCACTCATCTTTTTGTCACTCTTCTCTCATGAACCCGCCGGACCTCTCCTTGCACATCAGCCTCCCCTTCTTCGCCCCGCCCTCTCACAATTCTGACTTCACCCATCAAAATGGTTGCTTCCACTTTGGATATCAACCAGCCCATGTGGCTCGTCCTCGTCACCAAGCTTATAATCTCCTCCATGGCCGACGCCGTGACTTTAAACCAACTGTTGGTGGGTGTGGAGTGAGAAGAAGCATCCGAGCTCCTAGAATGAGATGGACTACGACGCTACATGCTCATTTTGTACACGCTGTTCAGCTTCTTGGCGGCCATGAAAGAGCTACACCAAAATCAGTATTGGAGCTTATGAATGTCAAGGATCTAACCCTAGCTCATGTCAAAAGCCATTTGCAGATGTTCCGAACAGTGAAGAACAGTGTGAAGAAGGGAACAGACGATTATGGAAGGCCTGAGATTGAAGCAGATGGGGTTTTATCTTCTTCTTCTTCTTCTCCTTCTTCTTCTTCTTCTTCTTCTTCATCTCTTCAAAAATCTAACTTTCACACAGTCAAACCAGGCAATAGTTGCGAGAGAACCACCTCAAACGGTGACGTTTTGCAAAGGATTAATTTAGAGTTCACTCTTGGAAGACCATGGGGATGCAAATAATAATAAAAAGTTAAAATAAAATCTTATTATTTATTATTGTATTAAGAAAATATCAACAGAAATGAATGTGAGGAATGAAGATGCTCCTACATGCCCATTTCTTGCCCATCTTGACCCTTCAGGTGCTCATCGCCTTCACTCCCGCACTCTTGCAGCACAATGGCTAGCAATGGCTCTACACACTGGCTATAACCATGCCTTCTTAACCCATGAGTCTGCCCTCAAATTTTCACTACTTCTAGTTACTGAATTTATTTCGTTATTAAGTAACTAAATTTCCTCGATCTCGTGCTATCGTTACGGTCATGCTCGCTATAAATTTTAACATTCAAGTGGTTGTCGTGTTTCTTAAAAGGTTAAGTATCTGTAAATTACTTTATACTGAGTTATTTGACTCTCCAGCATGGATGAATTGGTTTACCATACTAATTACTAACTAGAGATCATTTTCATTTTAGTTTCTCGTACTTTCATTTCTTTTACGGTTTAATGGTTACAGATCATGCACTAATTTCTATTCAATATAAGTTTTCATTTTATTAG

Coding sequence (CDS)

ATGAACCCGCCGGACCTCTCCTTGCACATCAGCCTCCCCTTCTTCGCCCCGCCCTCTCACAATTCTGACTTCACCCATCAAAATGGTTGCTTCCACTTTGGATATCAACCAGCCCATGTGGCTCGTCCTCGTCACCAAGCTTATAATCTCCTCCATGGCCGACGCCGTGACTTTAAACCAACTGTTGGTGGGTGTGGAGTGAGAAGAAGCATCCGAGCTCCTAGAATGAGATGGACTACGACGCTACATGCTCATTTTGTACACGCTGTTCAGCTTCTTGGCGGCCATGAAAGAGCTACACCAAAATCAGTATTGGAGCTTATGAATGTCAAGGATCTAACCCTAGCTCATGTCAAAAGCCATTTGCAGATGTTCCGAACAGTGAAGAACAGTGTGAAGAAGGGAACAGACGATTATGGAAGGCCTGAGATTGAAGCAGATGGGGTTTTATCTTCTTCTTCTTCTTCTCCTTCTTCTTCTTCTTCTTCTTCTTCATCTCTTCAAAAATCTAACTTTCACACAGTCAAACCAGGCAATAGTTGCGAGAGAACCACCTCAAACGGTGACGTTTTGCAAAGGATTAATTTAGAGTTCACTCTTGGAAGACCATGGGGATGCAAATAA

Protein sequence

MNPPDLSLHISLPFFAPPSHNSDFTHQNGCFHFGYQPAHVARPRHQAYNLLHGRRRDFKPTVGGCGVRRSIRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSSSPSSSSSSSSSLQKSNFHTVKPGNSCERTTSNGDVLQRINLEFTLGRPWGCK
Homology
BLAST of Cp4.1LG02g07170 vs. ExPASy Swiss-Prot
Match: Q9FJV5 (Probable transcription factor KAN4 OS=Arabidopsis thaliana OX=3702 GN=KAN4 PE=1 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.2e-34
Identity = 109/249 (43.78%), Postives = 139/249 (55.82%), Query Frame = 0

Query: 4   PDLSLHISLPFF--APPSHN--------------SDFTHQNGCFH-----FGYQPAHVAR 63
           PDLSL ISLP +    P H               SD +H+N  F+      G+   H  R
Sbjct: 17  PDLSLQISLPNYHAGKPLHGGDRSSTSSDSGSSLSDLSHENNFFNKPLLSLGFDHHH-QR 76

Query: 64  PRHQAYNLLHGRRRDFKPTVGG-CGVRRSIRAPRMRWTTTLHAHFVHAVQLLGGHERATP 123
             +     ++G  RDFK +     G++RSIRAPRMRWT+TLHAHFVHAVQLLGGHERATP
Sbjct: 77  RSNMFQPQIYG--RDFKRSSSSMVGLKRSIRAPRMRWTSTLHAHFVHAVQLLGGHERATP 136

Query: 124 KSVLELMNVKDLTLAHVKSHLQMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSSS----- 183
           KSVLELMNVKDLTLAHVKSHLQM+RTVK    KG+   G+ E EA+  +  ++++     
Sbjct: 137 KSVLELMNVKDLTLAHVKSHLQMYRTVK-CTDKGSPGEGKVEKEAEQRIEDNNNNEEADE 196

Query: 184 -PSSSSSSSSSLQKSNFHTVKPGNSCERTTS------------------NGDVLQRINLE 206
              ++S +SSS+QK+   +        R+ S                    D    +NL+
Sbjct: 197 GTDTNSPNSSSVQKTQRASWSSTKEVSRSISTQAYSHLGTTHHTKDNEEKEDTNIHLNLD 256

BLAST of Cp4.1LG02g07170 vs. ExPASy Swiss-Prot
Match: Q941I2 (Probable transcription factor KAN3 OS=Arabidopsis thaliana OX=3702 GN=KAN3 PE=2 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 3.3e-27
Identity = 71/141 (50.35%), Postives = 95/141 (67.38%), Query Frame = 0

Query: 47  AYNLLHGRRRDFKPTVGGCGVRRSIRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLE 106
           ++NL +  RR  +P       +R +RAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLE
Sbjct: 138 SFNLHNRHRRQAQPQPPRFTAKRGVRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLE 197

Query: 107 LMNVKDLTLAHVKSHLQMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSSSPSSSSSSSSS 166
           LM+V+DLTLAHVKSHLQM+RT+K S +K T   G+ + E    ++S   + + +   ++S
Sbjct: 198 LMDVQDLTLAHVKSHLQMYRTIK-STEKPTTSSGQSDCENGSQVNSEREARNLTGLWNNS 257

Query: 167 LQKSNFHTVKPGNSCERTTSN 188
             ++ F      +S    +SN
Sbjct: 258 SSEARFQLKAKASSGVDISSN 277

BLAST of Cp4.1LG02g07170 vs. ExPASy Swiss-Prot
Match: Q0J235 (Probable transcription factor RL9 OS=Oryza sativa subsp. japonica OX=39947 GN=RL9 PE=2 SV=2)

HSP 1 Score: 116.3 bits (290), Expect = 4.1e-25
Identity = 71/127 (55.91%), Postives = 84/127 (66.14%), Query Frame = 0

Query: 45  HQAYNLLHGRRRDFKPTVGGCGVR--------RSIRAPRMRWTTTLHAHFVHAVQLLGGH 104
           H  ++ LHG     +P VG    R        RS+RAPRMRWT+TLHA FVHAV+LLGGH
Sbjct: 292 HHHHHHLHGG----QPFVGALASRFMPKLPAKRSMRAPRMRWTSTLHARFVHAVELLGGH 351

Query: 105 ERATPKSVLELMNVKDLTLAHVKSHLQMFRTVKNSVK----KGTDDYGRPEIEADGVLSS 160
           ERATPKSVLELM+VKDLTLAHVKSHLQM+RTVK++ K     G  D G  + E  G   +
Sbjct: 352 ERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKSTDKPAASSGPADGGSGDEEFAGGGQA 411

BLAST of Cp4.1LG02g07170 vs. ExPASy Swiss-Prot
Match: Q93WJ9 (Transcription repressor KAN1 OS=Arabidopsis thaliana OX=3702 GN=KAN1 PE=1 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.2e-24
Identity = 72/146 (49.32%), Postives = 92/146 (63.01%), Query Frame = 0

Query: 45  HQAYNLLHGRRRDFKPTVGGCGVRRSIRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSV 104
           H  + ++  R     PT      +RS+RAPRMRWT++LHA FVHAV+LLGGHERATPKSV
Sbjct: 197 HHHHGMIRSRFLPKMPT------KRSMRAPRMRWTSSLHARFVHAVELLGGHERATPKSV 256

Query: 105 LELMNVKDLTLAHVKSHLQMFRTVKNSVKKGTDDYGRPE----IEADGVLSSSSSSPSSS 164
           LELM+VKDLTLAHVKSHLQM+RTVK + K      G  E    I  + V   SS+   + 
Sbjct: 257 LELMDVKDLTLAHVKSHLQMYRTVKTTNKPAASSDGSGEEEMGINGNEVHHQSSTDQRAQ 316

Query: 165 SSSSSSLQKSNFHTVKP--GNSCERT 185
           S  +S  Q+++  + +P   NS   T
Sbjct: 317 SDDTSLHQETDISSTQPRWSNSSRET 336

BLAST of Cp4.1LG02g07170 vs. ExPASy Swiss-Prot
Match: Q9C616 (Probable transcription factor KAN2 OS=Arabidopsis thaliana OX=3702 GN=KAN2 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 5.9e-24
Identity = 70/146 (47.95%), Postives = 91/146 (62.33%), Query Frame = 0

Query: 35  YQPAHVARPRHQAYNLLHGRRRDFKPTVGGCGVRRSIRAPRMRWTTTLHAHFVHAVQLLG 94
           +  + V+ P +  ++     R  F P       +RS+RAPRMRWTTTLHA FVHAV+LLG
Sbjct: 178 FNTSSVSNPNYHNHHHQTLNRARFMPRF---PAKRSMRAPRMRWTTTLHARFVHAVELLG 237

Query: 95  GHERATPKSVLELMNVKDLTLAHVKSHLQMFRTVKNSVKKGTDDYGRPEIEADGVLSSSS 154
           GHERATPKSVLELM+VKDLTLAHVKSHLQM+RTVK + K      G+ ++  +G    ++
Sbjct: 238 GHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKAAASS-GQSDVYENGSSGDNN 297

Query: 155 S---------SPSSSSSSSSSLQKSN 172
           S             S   ++ L+KSN
Sbjct: 298 SDDWMFDMNRKSRDSEELTNPLEKSN 319

BLAST of Cp4.1LG02g07170 vs. NCBI nr
Match: XP_023525472.1 (probable transcription factor KAN4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 423 bits (1088), Expect = 1.57e-149
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0

Query: 1   MNPPDLSLHISLPFFAPPSHNSDFTHQNGCFHFGYQPAHVARPRHQAYNLLHGRRRDFKP 60
           MNPPDLSLHISLPFFAPPSHNSDFTHQNGCFHFGYQPAHVARPRHQAYNLLHGRRRDFKP
Sbjct: 1   MNPPDLSLHISLPFFAPPSHNSDFTHQNGCFHFGYQPAHVARPRHQAYNLLHGRRRDFKP 60

Query: 61  TVGGCGVRRSIRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKS 120
           TVGGCGVRRSIRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKS
Sbjct: 61  TVGGCGVRRSIRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKS 120

Query: 121 HLQMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSSSPSSSSSSSSSLQKSNFHTVKPGNS 180
           HLQMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSSSPSSSSSSSSSLQKSNFHTVKPGNS
Sbjct: 121 HLQMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSSSPSSSSSSSSSLQKSNFHTVKPGNS 180

Query: 181 CERTTSNGDVLQRINLEFTLGRPWGCK 207
           CERTTSNGDVLQRINLEFTLGRPWGCK
Sbjct: 181 CERTTSNGDVLQRINLEFTLGRPWGCK 207

BLAST of Cp4.1LG02g07170 vs. NCBI nr
Match: XP_022941100.1 (probable transcription factor KAN4 [Cucurbita moschata])

HSP 1 Score: 384 bits (986), Expect = 8.28e-134
Identity = 190/204 (93.14%), Postives = 197/204 (96.57%), Query Frame = 0

Query: 1   MNPPDLSLHISLPFFAPPSHNSDFTHQNGCFHFGYQPAHVARPRHQAYNLLHGRRRDFKP 60
           MNPPDLSLHISLPFFAPPSHN DFTHQNGCFHFGY+PAH+ RPRHQAYN+LHGRRRDFKP
Sbjct: 1   MNPPDLSLHISLPFFAPPSHNPDFTHQNGCFHFGYEPAHLGRPRHQAYNVLHGRRRDFKP 60

Query: 61  TVGGCGVRRSIRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKS 120
           +VGGCGVRRSIRAPRMRWTTTLHAHFVHAV+LLGGHERATPKSVLELMNVKDLTLAHVKS
Sbjct: 61  SVGGCGVRRSIRAPRMRWTTTLHAHFVHAVELLGGHERATPKSVLELMNVKDLTLAHVKS 120

Query: 121 HLQMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSSSPSSSSSSSS-SLQKSNFHTVKPGN 180
           HLQMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSSS SSSSSSSS SLQKSNFHT+K GN
Sbjct: 121 HLQMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSSSSSSSSSSSSLSLQKSNFHTLKRGN 180

Query: 181 SCERTTSNGDVLQRINLEFTLGRP 203
           SCERT SN DVLQRINL+FTLGRP
Sbjct: 181 SCERTNSNADVLQRINLDFTLGRP 204

BLAST of Cp4.1LG02g07170 vs. NCBI nr
Match: XP_022982284.1 (probable transcription factor KAN4 [Cucurbita maxima])

HSP 1 Score: 343 bits (879), Expect = 1.86e-117
Identity = 179/205 (87.32%), Postives = 184/205 (89.76%), Query Frame = 0

Query: 1   MNPPDLSLHISLPFFAPPSHNSDFTHQNGCFHFGYQPAHVARPR--HQAYNLLHGRRRDF 60
           MNPPDLSLHISLPFFAPPSHNSD THQNG F  GY+P HV RPR  HQAYN++HGRRRDF
Sbjct: 10  MNPPDLSLHISLPFFAPPSHNSDLTHQNGFFRLGYEPGHVGRPRSRHQAYNVVHGRRRDF 69

Query: 61  KPTVGGCGVRRSIRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHV 120
           K + GGCGVRRSIRAPRMRWTTTLHAHFVHAV+LLGGHERATPKSVLELMNVKDLTLAHV
Sbjct: 70  KRSGGGCGVRRSIRAPRMRWTTTLHAHFVHAVELLGGHERATPKSVLELMNVKDLTLAHV 129

Query: 121 KSHLQMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSSSPSSSSSSSSSLQKSNFHTVKPG 180
           KSHLQMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSSS SSSSSSSSSL       V  G
Sbjct: 130 KSHLQMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSSS-SSSSSSSSSLS------VCRG 189

Query: 181 NSCERTTSNGDVLQRINLEFTLGRP 203
           NSCERT SNGDVLQRINLEFTLGRP
Sbjct: 190 NSCERTNSNGDVLQRINLEFTLGRP 207

BLAST of Cp4.1LG02g07170 vs. NCBI nr
Match: KAG6608510.1 (putative transcription factor KAN4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 318 bits (816), Expect = 1.23e-107
Identity = 155/164 (94.51%), Postives = 161/164 (98.17%), Query Frame = 0

Query: 1   MNPPDLSLHISLPFFAPPSHNSDFTHQNGCFHFGYQPAHVARPRHQAYNLLHGRRRDFKP 60
           MNPPDLSLHISLPFFAPPSHN DFTHQNGCFHFGY+PAH+ RPRHQAYN+LHGRRRDFKP
Sbjct: 1   MNPPDLSLHISLPFFAPPSHNPDFTHQNGCFHFGYEPAHLGRPRHQAYNVLHGRRRDFKP 60

Query: 61  TVGGCGVRRSIRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKS 120
           +VGGCGVRRSIRAPRMRWTTTLHAHFVHAV+LLGGHERATPKSVLELMNVKDLTLAHVKS
Sbjct: 61  SVGGCGVRRSIRAPRMRWTTTLHAHFVHAVELLGGHERATPKSVLELMNVKDLTLAHVKS 120

Query: 121 HLQMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSSSPSSSSSSS 164
           HLQMFRTVKNSVKKGTDD+GRPEIEADGVLSSSSSS SSSSSSS
Sbjct: 121 HLQMFRTVKNSVKKGTDDHGRPEIEADGVLSSSSSSSSSSSSSS 164

BLAST of Cp4.1LG02g07170 vs. NCBI nr
Match: XP_023535459.1 (probable transcription factor KAN4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 209 bits (532), Expect = 4.36e-64
Identity = 134/249 (53.82%), Postives = 153/249 (61.45%), Query Frame = 0

Query: 4   PDLSLHISLPFFAPP------------SHNSDFTHQNGCFHFGYQPAHVA--RPRHQAYN 63
           PDLSL ISLP    P            S  SD +H+N  F  G++   +   +  HQA N
Sbjct: 8   PDLSLQISLPMSTKPNPPSSTTTHSGCSAKSDLSHKNNLFRLGFEVGDMGLLQRHHQACN 67

Query: 64  LLHGRRRDFKPTVGGC--GVRRSIRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLEL 123
           +    RRDFK +VG    GV+RS RAPRMRWTTTLHAHF+HAV+LLGGHERATPKSVLEL
Sbjct: 68  VRC--RRDFKRSVGDVAYGVKRSPRAPRMRWTTTLHAHFIHAVELLGGHERATPKSVLEL 127

Query: 124 MNVKDLTLAHVKSHLQMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSSSPSSSSSSSSSL 183
           MNVKDLTLAHVKSHLQM+RTVKN++K GTDD GRPE+E D V+ SSSSS    SSSS+S 
Sbjct: 128 MNVKDLTLAHVKSHLQMYRTVKNTIK-GTDDSGRPELEPDAVVLSSSSS----SSSSASA 187

Query: 184 QKSNFH------------TVKPGNSCERTTSNGDV---------------------LQRI 203
           Q SNF                   SC+RT SNGDV                     +QRI
Sbjct: 188 QNSNFQWRRLQRIQRSSLVTSMHKSCDRTKSNGDVFAKSRGIKVEGSNGDYEKAIAMQRI 247

BLAST of Cp4.1LG02g07170 vs. ExPASy TrEMBL
Match: A0A6J1FSK4 (probable transcription factor KAN4 OS=Cucurbita moschata OX=3662 GN=LOC111446497 PE=4 SV=1)

HSP 1 Score: 384 bits (986), Expect = 4.01e-134
Identity = 190/204 (93.14%), Postives = 197/204 (96.57%), Query Frame = 0

Query: 1   MNPPDLSLHISLPFFAPPSHNSDFTHQNGCFHFGYQPAHVARPRHQAYNLLHGRRRDFKP 60
           MNPPDLSLHISLPFFAPPSHN DFTHQNGCFHFGY+PAH+ RPRHQAYN+LHGRRRDFKP
Sbjct: 1   MNPPDLSLHISLPFFAPPSHNPDFTHQNGCFHFGYEPAHLGRPRHQAYNVLHGRRRDFKP 60

Query: 61  TVGGCGVRRSIRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKS 120
           +VGGCGVRRSIRAPRMRWTTTLHAHFVHAV+LLGGHERATPKSVLELMNVKDLTLAHVKS
Sbjct: 61  SVGGCGVRRSIRAPRMRWTTTLHAHFVHAVELLGGHERATPKSVLELMNVKDLTLAHVKS 120

Query: 121 HLQMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSSSPSSSSSSSS-SLQKSNFHTVKPGN 180
           HLQMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSSS SSSSSSSS SLQKSNFHT+K GN
Sbjct: 121 HLQMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSSSSSSSSSSSSLSLQKSNFHTLKRGN 180

Query: 181 SCERTTSNGDVLQRINLEFTLGRP 203
           SCERT SN DVLQRINL+FTLGRP
Sbjct: 181 SCERTNSNADVLQRINLDFTLGRP 204

BLAST of Cp4.1LG02g07170 vs. ExPASy TrEMBL
Match: A0A6J1J438 (probable transcription factor KAN4 OS=Cucurbita maxima OX=3661 GN=LOC111481162 PE=4 SV=1)

HSP 1 Score: 343 bits (879), Expect = 8.99e-118
Identity = 179/205 (87.32%), Postives = 184/205 (89.76%), Query Frame = 0

Query: 1   MNPPDLSLHISLPFFAPPSHNSDFTHQNGCFHFGYQPAHVARPR--HQAYNLLHGRRRDF 60
           MNPPDLSLHISLPFFAPPSHNSD THQNG F  GY+P HV RPR  HQAYN++HGRRRDF
Sbjct: 10  MNPPDLSLHISLPFFAPPSHNSDLTHQNGFFRLGYEPGHVGRPRSRHQAYNVVHGRRRDF 69

Query: 61  KPTVGGCGVRRSIRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHV 120
           K + GGCGVRRSIRAPRMRWTTTLHAHFVHAV+LLGGHERATPKSVLELMNVKDLTLAHV
Sbjct: 70  KRSGGGCGVRRSIRAPRMRWTTTLHAHFVHAVELLGGHERATPKSVLELMNVKDLTLAHV 129

Query: 121 KSHLQMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSSSPSSSSSSSSSLQKSNFHTVKPG 180
           KSHLQMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSSS SSSSSSSSSL       V  G
Sbjct: 130 KSHLQMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSSS-SSSSSSSSSLS------VCRG 189

Query: 181 NSCERTTSNGDVLQRINLEFTLGRP 203
           NSCERT SNGDVLQRINLEFTLGRP
Sbjct: 190 NSCERTNSNGDVLQRINLEFTLGRP 207

BLAST of Cp4.1LG02g07170 vs. ExPASy TrEMBL
Match: A0A6J1F986 (probable transcription factor KAN4 OS=Cucurbita moschata OX=3662 GN=LOC111443475 PE=4 SV=1)

HSP 1 Score: 206 bits (525), Expect = 2.35e-63
Identity = 133/244 (54.51%), Postives = 157/244 (64.34%), Query Frame = 0

Query: 4   PDLSLHISLPFFA---PPSH-------NSDFTHQNGCFHFGYQPAHVA--RPRHQAYNLL 63
           PDLSL ISLP      PPS        ++D +H+N  F  G++   V   +  HQA N+ 
Sbjct: 9   PDLSLQISLPMSTNPNPPSSTTTHSGCSADLSHKNNLFRLGFEVGDVGLLQRHHQACNVR 68

Query: 64  HGRRRDFKPTVGGC--GVRRSIRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMN 123
              RRDFK +VG    GV+RS RAPRMRWTTTLHAHF+HAV+LLGGHERATPKSVLELMN
Sbjct: 69  S--RRDFKRSVGDVAYGVKRSPRAPRMRWTTTLHAHFIHAVELLGGHERATPKSVLELMN 128

Query: 124 VKDLTLAHVKSHLQMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSSSPSSSSSSSSS--- 183
           VKDLTLAHVKSHLQM+RTVKN+VK GTDD GRPE+E D  + SSSSS SSS+S+ +S   
Sbjct: 129 VKDLTLAHVKSHLQMYRTVKNTVK-GTDDSGRPELEPDAAVLSSSSSSSSSASAQNSNFG 188

Query: 184 ------LQKSNFHTVKPGNSCERTTSNGDV---------------------LQRINLEFT 203
                 +Q+S+  T      C+RT SNGDV                     +QRINLEFT
Sbjct: 189 WRRLQRIQRSSLVTSMHKR-CDRTKSNGDVFANSRGIKVEGSNGDYEKPIAMQRINLEFT 248

BLAST of Cp4.1LG02g07170 vs. ExPASy TrEMBL
Match: A0A5A7UT98 (Putative transcription factor KAN4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1312G00080 PE=4 SV=1)

HSP 1 Score: 204 bits (519), Expect = 2.01e-62
Identity = 126/244 (51.64%), Postives = 149/244 (61.07%), Query Frame = 0

Query: 4   PDLSLHISLPFFAPP------------------SHNSDFTHQNGCFHFGYQPAHVARPRH 63
           PDLSL ISLP    P                  S  SD +H++G FH G++   +  P  
Sbjct: 8   PDLSLQISLPMSTLPCEAKAIKPQSSTTVDSSSSGKSDLSHESGLFHLGFEAGDLDGPLR 67

Query: 64  QAYNLLHGRR--RDFKPTVG--GCGVRRSIRAPRMRWTTTLHAHFVHAVQLLGGHERATP 123
           + +      R  RDFK + G  GCGVRR+IRAPRMRWTTTLHAHFVHAV+LLGGHERATP
Sbjct: 68  RPHQACCNVRDHRDFKRSRGRVGCGVRRNIRAPRMRWTTTLHAHFVHAVELLGGHERATP 127

Query: 124 KSVLELMNVKDLTLAHVKSHLQMFRTVKNSVKKGTDDYGRPEIEADG-VLSSSSSSPSSS 183
           KSVLELMNVKDLTLAHVKSHLQM+RTVKN+VK+  DD GRPE+E DG VLSS     +  
Sbjct: 128 KSVLELMNVKDLTLAHVKSHLQMYRTVKNTVKETADDCGRPEVEGDGMVLSSCVKKSNFG 187

Query: 184 SSSSSSLQKSNFHTVKPGNSCERTTSNGDV---------------------LQRINLEFT 203
           S+    +Q+S+F T     SC+ T SN D                      ++RINLEFT
Sbjct: 188 SNHFQRIQRSSFVTSMH-KSCDTTKSNADAFAKSRGIKVEGSSGDYHEAITMERINLEFT 247

BLAST of Cp4.1LG02g07170 vs. ExPASy TrEMBL
Match: A0A1S3C0D9 (probable transcription factor KAN4 OS=Cucumis melo OX=3656 GN=LOC103495027 PE=4 SV=1)

HSP 1 Score: 204 bits (519), Expect = 2.01e-62
Identity = 126/244 (51.64%), Postives = 149/244 (61.07%), Query Frame = 0

Query: 4   PDLSLHISLPFFAPP------------------SHNSDFTHQNGCFHFGYQPAHVARPRH 63
           PDLSL ISLP    P                  S  SD +H++G FH G++   +  P  
Sbjct: 8   PDLSLQISLPMSTLPCEAKAIKPQSSTTVDSSSSGKSDLSHESGLFHLGFEAGDLDGPLR 67

Query: 64  QAYNLLHGRR--RDFKPTVG--GCGVRRSIRAPRMRWTTTLHAHFVHAVQLLGGHERATP 123
           + +      R  RDFK + G  GCGVRR+IRAPRMRWTTTLHAHFVHAV+LLGGHERATP
Sbjct: 68  RPHQACCNVRDHRDFKRSRGRVGCGVRRNIRAPRMRWTTTLHAHFVHAVELLGGHERATP 127

Query: 124 KSVLELMNVKDLTLAHVKSHLQMFRTVKNSVKKGTDDYGRPEIEADG-VLSSSSSSPSSS 183
           KSVLELMNVKDLTLAHVKSHLQM+RTVKN+VK+  DD GRPE+E DG VLSS     +  
Sbjct: 128 KSVLELMNVKDLTLAHVKSHLQMYRTVKNTVKETADDCGRPEVEGDGMVLSSCVKKSNFG 187

Query: 184 SSSSSSLQKSNFHTVKPGNSCERTTSNGDV---------------------LQRINLEFT 203
           S+    +Q+S+F T     SC+ T SN D                      ++RINLEFT
Sbjct: 188 SNHFQRIQRSSFVTSMH-KSCDTTKSNADAFAKSRGIKVEGSSGDYHEAITMERINLEFT 247

BLAST of Cp4.1LG02g07170 vs. TAIR 10
Match: AT5G42630.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 147.1 bits (370), Expect = 1.5e-35
Identity = 109/249 (43.78%), Postives = 139/249 (55.82%), Query Frame = 0

Query: 4   PDLSLHISLPFF--APPSHN--------------SDFTHQNGCFH-----FGYQPAHVAR 63
           PDLSL ISLP +    P H               SD +H+N  F+      G+   H  R
Sbjct: 17  PDLSLQISLPNYHAGKPLHGGDRSSTSSDSGSSLSDLSHENNFFNKPLLSLGFDHHH-QR 76

Query: 64  PRHQAYNLLHGRRRDFKPTVGG-CGVRRSIRAPRMRWTTTLHAHFVHAVQLLGGHERATP 123
             +     ++G  RDFK +     G++RSIRAPRMRWT+TLHAHFVHAVQLLGGHERATP
Sbjct: 77  RSNMFQPQIYG--RDFKRSSSSMVGLKRSIRAPRMRWTSTLHAHFVHAVQLLGGHERATP 136

Query: 124 KSVLELMNVKDLTLAHVKSHLQMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSSS----- 183
           KSVLELMNVKDLTLAHVKSHLQM+RTVK    KG+   G+ E EA+  +  ++++     
Sbjct: 137 KSVLELMNVKDLTLAHVKSHLQMYRTVK-CTDKGSPGEGKVEKEAEQRIEDNNNNEEADE 196

Query: 184 -PSSSSSSSSSLQKSNFHTVKPGNSCERTTS------------------NGDVLQRINLE 206
              ++S +SSS+QK+   +        R+ S                    D    +NL+
Sbjct: 197 GTDTNSPNSSSVQKTQRASWSSTKEVSRSISTQAYSHLGTTHHTKDNEEKEDTNIHLNLD 256

BLAST of Cp4.1LG02g07170 vs. TAIR 10
Match: AT5G42630.2 (Homeodomain-like superfamily protein )

HSP 1 Score: 139.0 bits (349), Expect = 4.2e-33
Identity = 96/195 (49.23%), Postives = 122/195 (62.56%), Query Frame = 0

Query: 4   PDLSLHISLPFF--APPSHN--------------SDFTHQNGCFH-----FGYQPAHVAR 63
           PDLSL ISLP +    P H               SD +H+N  F+      G+   H  R
Sbjct: 17  PDLSLQISLPNYHAGKPLHGGDRSSTSSDSGSSLSDLSHENNFFNKPLLSLGFDHHH-QR 76

Query: 64  PRHQAYNLLHGRRRDFKPTVGG-CGVRRSIRAPRMRWTTTLHAHFVHAVQLLGGHERATP 123
             +     ++G  RDFK +     G++RSIRAPRMRWT+TLHAHFVHAVQLLGGHERATP
Sbjct: 77  RSNMFQPQIYG--RDFKRSSSSMVGLKRSIRAPRMRWTSTLHAHFVHAVQLLGGHERATP 136

Query: 124 KSVLELMNVKDLTLAHVKSHLQMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSSS----- 171
           KSVLELMNVKDLTLAHVKSHLQM+RTVK    KG+   G+ E EA+  +  ++++     
Sbjct: 137 KSVLELMNVKDLTLAHVKSHLQMYRTVK-CTDKGSPGEGKVEKEAEQRIEDNNNNEEADE 196

BLAST of Cp4.1LG02g07170 vs. TAIR 10
Match: AT4G17695.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 123.2 bits (308), Expect = 2.4e-28
Identity = 71/141 (50.35%), Postives = 95/141 (67.38%), Query Frame = 0

Query: 47  AYNLLHGRRRDFKPTVGGCGVRRSIRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLE 106
           ++NL +  RR  +P       +R +RAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLE
Sbjct: 138 SFNLHNRHRRQAQPQPPRFTAKRGVRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLE 197

Query: 107 LMNVKDLTLAHVKSHLQMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSSSPSSSSSSSSS 166
           LM+V+DLTLAHVKSHLQM+RT+K S +K T   G+ + E    ++S   + + +   ++S
Sbjct: 198 LMDVQDLTLAHVKSHLQMYRTIK-STEKPTTSSGQSDCENGSQVNSEREARNLTGLWNNS 257

Query: 167 LQKSNFHTVKPGNSCERTTSN 188
             ++ F      +S    +SN
Sbjct: 258 SSEARFQLKAKASSGVDISSN 277

BLAST of Cp4.1LG02g07170 vs. TAIR 10
Match: AT5G16560.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 114.8 bits (286), Expect = 8.4e-26
Identity = 72/146 (49.32%), Postives = 92/146 (63.01%), Query Frame = 0

Query: 45  HQAYNLLHGRRRDFKPTVGGCGVRRSIRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSV 104
           H  + ++  R     PT      +RS+RAPRMRWT++LHA FVHAV+LLGGHERATPKSV
Sbjct: 197 HHHHGMIRSRFLPKMPT------KRSMRAPRMRWTSSLHARFVHAVELLGGHERATPKSV 256

Query: 105 LELMNVKDLTLAHVKSHLQMFRTVKNSVKKGTDDYGRPE----IEADGVLSSSSSSPSSS 164
           LELM+VKDLTLAHVKSHLQM+RTVK + K      G  E    I  + V   SS+   + 
Sbjct: 257 LELMDVKDLTLAHVKSHLQMYRTVKTTNKPAASSDGSGEEEMGINGNEVHHQSSTDQRAQ 316

Query: 165 SSSSSSLQKSNFHTVKP--GNSCERT 185
           S  +S  Q+++  + +P   NS   T
Sbjct: 317 SDDTSLHQETDISSTQPRWSNSSRET 336

BLAST of Cp4.1LG02g07170 vs. TAIR 10
Match: AT1G32240.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 112.5 bits (280), Expect = 4.2e-25
Identity = 70/146 (47.95%), Postives = 91/146 (62.33%), Query Frame = 0

Query: 35  YQPAHVARPRHQAYNLLHGRRRDFKPTVGGCGVRRSIRAPRMRWTTTLHAHFVHAVQLLG 94
           +  + V+ P +  ++     R  F P       +RS+RAPRMRWTTTLHA FVHAV+LLG
Sbjct: 178 FNTSSVSNPNYHNHHHQTLNRARFMPRF---PAKRSMRAPRMRWTTTLHARFVHAVELLG 237

Query: 95  GHERATPKSVLELMNVKDLTLAHVKSHLQMFRTVKNSVKKGTDDYGRPEIEADGVLSSSS 154
           GHERATPKSVLELM+VKDLTLAHVKSHLQM+RTVK + K      G+ ++  +G    ++
Sbjct: 238 GHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKAAASS-GQSDVYENGSSGDNN 297

Query: 155 S---------SPSSSSSSSSSLQKSN 172
           S             S   ++ L+KSN
Sbjct: 298 SDDWMFDMNRKSRDSEELTNPLEKSN 319

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9FJV52.2e-3443.78Probable transcription factor KAN4 OS=Arabidopsis thaliana OX=3702 GN=KAN4 PE=1 ... [more]
Q941I23.3e-2750.35Probable transcription factor KAN3 OS=Arabidopsis thaliana OX=3702 GN=KAN3 PE=2 ... [more]
Q0J2354.1e-2555.91Probable transcription factor RL9 OS=Oryza sativa subsp. japonica OX=39947 GN=RL... [more]
Q93WJ91.2e-2449.32Transcription repressor KAN1 OS=Arabidopsis thaliana OX=3702 GN=KAN1 PE=1 SV=1[more]
Q9C6165.9e-2447.95Probable transcription factor KAN2 OS=Arabidopsis thaliana OX=3702 GN=KAN2 PE=2 ... [more]
Match NameE-valueIdentityDescription
XP_023525472.11.57e-149100.00probable transcription factor KAN4 [Cucurbita pepo subsp. pepo][more]
XP_022941100.18.28e-13493.14probable transcription factor KAN4 [Cucurbita moschata][more]
XP_022982284.11.86e-11787.32probable transcription factor KAN4 [Cucurbita maxima][more]
KAG6608510.11.23e-10794.51putative transcription factor KAN4, partial [Cucurbita argyrosperma subsp. soror... [more]
XP_023535459.14.36e-6453.82probable transcription factor KAN4 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
A0A6J1FSK44.01e-13493.14probable transcription factor KAN4 OS=Cucurbita moschata OX=3662 GN=LOC111446497... [more]
A0A6J1J4388.99e-11887.32probable transcription factor KAN4 OS=Cucurbita maxima OX=3661 GN=LOC111481162 P... [more]
A0A6J1F9862.35e-6354.51probable transcription factor KAN4 OS=Cucurbita moschata OX=3662 GN=LOC111443475... [more]
A0A5A7UT982.01e-6251.64Putative transcription factor KAN4 OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A1S3C0D92.01e-6251.64probable transcription factor KAN4 OS=Cucumis melo OX=3656 GN=LOC103495027 PE=4 ... [more]
Match NameE-valueIdentityDescription
AT5G42630.11.5e-3543.78Homeodomain-like superfamily protein [more]
AT5G42630.24.2e-3349.23Homeodomain-like superfamily protein [more]
AT4G17695.12.4e-2850.35Homeodomain-like superfamily protein [more]
AT5G16560.18.4e-2649.32Homeodomain-like superfamily protein [more]
AT1G32240.14.2e-2547.95Homeodomain-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006447Myb domain, plantsTIGRFAMTIGR01557TIGR01557coord: 74..127
e-value: 2.9E-23
score: 79.9
NoneNo IPR availableGENE3D1.10.10.60coord: 73..130
e-value: 7.1E-26
score: 92.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 133..186
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 148..186
NoneNo IPR availablePANTHERPTHR31496:SF25TRANSCRIPTION FACTOR KAN4-RELATEDcoord: 19..174
IPR044847Transcription repressor KANADIPANTHERPTHR31496TRANSCRIPTION FACTOR KAN2-RELATEDcoord: 19..174
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 71..130

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG02g07170.1Cp4.1LG02g07170.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010158 abaxial cell fate specification
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0000976 transcription cis-regulatory region binding
molecular_function GO:0003677 DNA binding