Cp4.1LG02g07170 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACAAGACGCCATTACATCTCTCTGTCTCTCTTGCCCTCTCTTTCTTCTCCTTAAGCTTTATTCTTAAAAGGATAACAACATCTTCTCTCTTTCTCTTCTGCTCTTCTGCCCTTAACCTTTTCTTCCGTTCACTCCTCTTCTTAATACATCCAATATATGTTACTCATTCCTTTTCCTCTTCAAATCATAACCCACTCATTACCCTTTAAACCACTCATCTTTTTGTCACTCTTCTCTCATGAACCCGCCGGACCTCTCCTTGCACATCAGCCTCCCCTTCTTCGCCCCGCCCTCTCACAATTCTGACTTCACCCATCAAAATGGTTGCTTCCACTTTGGATATCAACCAGCCCATGTGGCTCGTCCTCGTCACCAAGCTTATAATCTCCTCCATGGCCGACGCCGTGACTTTAAACCAACTGTTGGTGGGTGTGGAGTGAGAAGAAGCATCCGAGCTCCTAGAATGAGATGGACTACGACGCTACATGCTCATTTTGTACACGCTGTTCAGCTTCTTGGCGGCCATGAAAGTAATTCCACAACAAAACCAATAACCTTAAACACATCAAAACTTTCATTTGTTCCATTAATTAATACCCATTTTTGTATCTGTCTCAGGAGCTACACCAAAATCAGTATTGGAGCTTATGAATGTCAAGGATCTAACCCTAGCTCATGTCAAAAGCCATTTGCAGGTACTTTCATTGTTTTATCTTCCCAATCAATTCTATGATATTGTCTATTTTATGCATAAATTCTCCTAATTTTATTTTTTTTATTATTTTTTTTATTTTCCCAAAAGGTCTCAAGATTTCTCCCTCTTCTTTTAGCATATCTTCTCTCGTTCATCAAAAAATTGCTCTCGATAGGATTAGTTTACTCATATTCTCGTATAACTTCTATCGTCTCGTTTATTGTGGTTCCTCGATCCTGCTAGTCATTTGCTTGTTCAAACCGTACATATTCAAAAAGGGGACAAGCTAAACAAACAAGCCATACCAATTTATAGAGTCAGAAGTCCGAAAGCACTCTGAGGTCTTAAGTAGGGTTAGGGAGTCAAATGAGCCTATTCCTCTAGCCTATGATTGTGGGTCGATTCGGCTATCGATTCCTGCATCTCCATGGGAGCACCGTGAGAAGGAGCTAATGATTCGGTTGTGGCTACTAAGCTATTGATAAGAGTTTTGGAGTCTAGTTTTTAGGTGGAGTTAATGATTTGGGAACATGTGGGTTGAAAGAGGTTGTTTTTGTCACATAATATTAATCTTATTCGCATAAAACATAACATTTTTGAAGATTAATTGATATGAGATGGGGGAGTAAAAGAGAGAGTACAAAAGTGAAAGGACAAAAAAGCATCTAAAATTACATCAACTACAACGCAAGGCTGTTAAAAAGAAAAAGGGTTTTTGGTTTGTTGTGGATGCAGATGTTCCGAACAGTGAAGAACAGTGTGAAGAAGGGAACAGGTAATAAATAAAAAACACTGTCTGTTCTTTAATGCAAACACTGTTCTTCTTCCTCACTTCTTCAGATCTGAAAATTCAAAAAAGCTTCATGTTTTTTTGTTGCAGACGATTATGGAAGGCCTGAGATTGAAGCAGATGGGGTTTTATCTTCTTCTTCTTCTTCTCCTTCTTCTTCTTCTTCTTCTTCTTCATCTCTTCAAAAATCTAACTTTCACACAGTCAAACCGTGAGTTCATCTTTCATTTGCTTCTTTTACTGTGTTTTTTTACTGTGTTTTAGACCCATAAACTCATCTTCTTTTACTGTGTGCAGAGGCAATAGTTGCGAGAGAACCACCTCAAACGGTGACGTTTTGCAAAGGATTAATTTAGAGTTCACTCTTGGAAGACCATGGGGATGCAAATAATAATAAAAAGTTAAAATAAAATCTTATTATTTATTATTGTATTAAGAAAATATCAACAGAAATGAATGTGAGGAATGAAGATGCTCCTACATGCCCATTTCTTGCCCATCTTGACCCTTCAGGTGCTCATCGCCTTCACTCCCGCACTCTTGCAGCACAATGGCTAGCAATGGCTCTACACACTGGCTATAACCATGCCTTCTTAACCCATGAGTCTGCCCTCAAATTTTCACTACTTCTAGTTACTGAATTTATTTCGTTATTAAGTAACTAAATTTCCTCGATCTCGTGCTATCGTTACGGTCATGCTCGCTATAAATTTTAACATTCAAGTGGTTGTCGTGTTTCTTAAAAGGTTAAGTATCTGTAAATTACTTTATACTGAGTTATTTGACTCTCCAGCATGGATGAATTGGTTTACCATACTAATTACTAACTAGAGATCATTTTCATTTTAGTTTCTCGTACTTTCATTTCTTTTACGGTTTAATGGTTACAGATCATGCACTAATTTCTATTCAATATAAGTTTTCATTTTATTAG ACAAGACGCCATTACATCTCTCTGTCTCTCTTGCCCTCTCTTTCTTCTCCTTAAGCTTTATTCTTAAAAGGATAACAACATCTTCTCTCTTTCTCTTCTGCTCTTCTGCCCTTAACCTTTTCTTCCGTTCACTCCTCTTCTTAATACATCCAATATATGTTACTCATTCCTTTTCCTCTTCAAATCATAACCCACTCATTACCCTTTAAACCACTCATCTTTTTGTCACTCTTCTCTCATGAACCCGCCGGACCTCTCCTTGCACATCAGCCTCCCCTTCTTCGCCCCGCCCTCTCACAATTCTGACTTCACCCATCAAAATGGTTGCTTCCACTTTGGATATCAACCAGCCCATGTGGCTCGTCCTCGTCACCAAGCTTATAATCTCCTCCATGGCCGACGCCGTGACTTTAAACCAACTGTTGGTGGGTGTGGAGTGAGAAGAAGCATCCGAGCTCCTAGAATGAGATGGACTACGACGCTACATGCTCATTTTGTACACGCTGTTCAGCTTCTTGGCGGCCATGAAAGAGCTACACCAAAATCAGTATTGGAGCTTATGAATGTCAAGGATCTAACCCTAGCTCATGTCAAAAGCCATTTGCAGATGTTCCGAACAGTGAAGAACAGTGTGAAGAAGGGAACAGACGATTATGGAAGGCCTGAGATTGAAGCAGATGGGGTTTTATCTTCTTCTTCTTCTTCTCCTTCTTCTTCTTCTTCTTCTTCTTCATCTCTTCAAAAATCTAACTTTCACACAGTCAAACCAGGCAATAGTTGCGAGAGAACCACCTCAAACGGTGACGTTTTGCAAAGGATTAATTTAGAGTTCACTCTTGGAAGACCATGGGGATGCAAATAATAATAAAAAGTTAAAATAAAATCTTATTATTTATTATTGTATTAAGAAAATATCAACAGAAATGAATGTGAGGAATGAAGATGCTCCTACATGCCCATTTCTTGCCCATCTTGACCCTTCAGGTGCTCATCGCCTTCACTCCCGCACTCTTGCAGCACAATGGCTAGCAATGGCTCTACACACTGGCTATAACCATGCCTTCTTAACCCATGAGTCTGCCCTCAAATTTTCACTACTTCTAGTTACTGAATTTATTTCGTTATTAAGTAACTAAATTTCCTCGATCTCGTGCTATCGTTACGGTCATGCTCGCTATAAATTTTAACATTCAAGTGGTTGTCGTGTTTCTTAAAAGGTTAAGTATCTGTAAATTACTTTATACTGAGTTATTTGACTCTCCAGCATGGATGAATTGGTTTACCATACTAATTACTAACTAGAGATCATTTTCATTTTAGTTTCTCGTACTTTCATTTCTTTTACGGTTTAATGGTTACAGATCATGCACTAATTTCTATTCAATATAAGTTTTCATTTTATTAG ATGAACCCGCCGGACCTCTCCTTGCACATCAGCCTCCCCTTCTTCGCCCCGCCCTCTCACAATTCTGACTTCACCCATCAAAATGGTTGCTTCCACTTTGGATATCAACCAGCCCATGTGGCTCGTCCTCGTCACCAAGCTTATAATCTCCTCCATGGCCGACGCCGTGACTTTAAACCAACTGTTGGTGGGTGTGGAGTGAGAAGAAGCATCCGAGCTCCTAGAATGAGATGGACTACGACGCTACATGCTCATTTTGTACACGCTGTTCAGCTTCTTGGCGGCCATGAAAGAGCTACACCAAAATCAGTATTGGAGCTTATGAATGTCAAGGATCTAACCCTAGCTCATGTCAAAAGCCATTTGCAGATGTTCCGAACAGTGAAGAACAGTGTGAAGAAGGGAACAGACGATTATGGAAGGCCTGAGATTGAAGCAGATGGGGTTTTATCTTCTTCTTCTTCTTCTCCTTCTTCTTCTTCTTCTTCTTCTTCATCTCTTCAAAAATCTAACTTTCACACAGTCAAACCAGGCAATAGTTGCGAGAGAACCACCTCAAACGGTGACGTTTTGCAAAGGATTAATTTAGAGTTCACTCTTGGAAGACCATGGGGATGCAAATAA MNPPDLSLHISLPFFAPPSHNSDFTHQNGCFHFGYQPAHVARPRHQAYNLLHGRRRDFKPTVGGCGVRRSIRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMFRTVKNSVKKGTDDYGRPEIEADGVLSSSSSSPSSSSSSSSSLQKSNFHTVKPGNSCERTTSNGDVLQRINLEFTLGRPWGCK Homology
BLAST of Cp4.1LG02g07170 vs. ExPASy Swiss-Prot
Match: Q9FJV5 (Probable transcription factor KAN4 OS=Arabidopsis thaliana OX=3702 GN=KAN4 PE=1 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 2.2e-34 Identity = 109/249 (43.78%), Postives = 139/249 (55.82%), Query Frame = 0
BLAST of Cp4.1LG02g07170 vs. ExPASy Swiss-Prot
Match: Q941I2 (Probable transcription factor KAN3 OS=Arabidopsis thaliana OX=3702 GN=KAN3 PE=2 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 3.3e-27 Identity = 71/141 (50.35%), Postives = 95/141 (67.38%), Query Frame = 0
BLAST of Cp4.1LG02g07170 vs. ExPASy Swiss-Prot
Match: Q0J235 (Probable transcription factor RL9 OS=Oryza sativa subsp. japonica OX=39947 GN=RL9 PE=2 SV=2) HSP 1 Score: 116.3 bits (290), Expect = 4.1e-25 Identity = 71/127 (55.91%), Postives = 84/127 (66.14%), Query Frame = 0
BLAST of Cp4.1LG02g07170 vs. ExPASy Swiss-Prot
Match: Q93WJ9 (Transcription repressor KAN1 OS=Arabidopsis thaliana OX=3702 GN=KAN1 PE=1 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 1.2e-24 Identity = 72/146 (49.32%), Postives = 92/146 (63.01%), Query Frame = 0
BLAST of Cp4.1LG02g07170 vs. ExPASy Swiss-Prot
Match: Q9C616 (Probable transcription factor KAN2 OS=Arabidopsis thaliana OX=3702 GN=KAN2 PE=2 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 5.9e-24 Identity = 70/146 (47.95%), Postives = 91/146 (62.33%), Query Frame = 0
BLAST of Cp4.1LG02g07170 vs. NCBI nr
Match: XP_023525472.1 (probable transcription factor KAN4 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 423 bits (1088), Expect = 1.57e-149 Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0
BLAST of Cp4.1LG02g07170 vs. NCBI nr
Match: XP_022941100.1 (probable transcription factor KAN4 [Cucurbita moschata]) HSP 1 Score: 384 bits (986), Expect = 8.28e-134 Identity = 190/204 (93.14%), Postives = 197/204 (96.57%), Query Frame = 0
BLAST of Cp4.1LG02g07170 vs. NCBI nr
Match: XP_022982284.1 (probable transcription factor KAN4 [Cucurbita maxima]) HSP 1 Score: 343 bits (879), Expect = 1.86e-117 Identity = 179/205 (87.32%), Postives = 184/205 (89.76%), Query Frame = 0
BLAST of Cp4.1LG02g07170 vs. NCBI nr
Match: KAG6608510.1 (putative transcription factor KAN4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 318 bits (816), Expect = 1.23e-107 Identity = 155/164 (94.51%), Postives = 161/164 (98.17%), Query Frame = 0
BLAST of Cp4.1LG02g07170 vs. NCBI nr
Match: XP_023535459.1 (probable transcription factor KAN4 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 209 bits (532), Expect = 4.36e-64 Identity = 134/249 (53.82%), Postives = 153/249 (61.45%), Query Frame = 0
BLAST of Cp4.1LG02g07170 vs. ExPASy TrEMBL
Match: A0A6J1FSK4 (probable transcription factor KAN4 OS=Cucurbita moschata OX=3662 GN=LOC111446497 PE=4 SV=1) HSP 1 Score: 384 bits (986), Expect = 4.01e-134 Identity = 190/204 (93.14%), Postives = 197/204 (96.57%), Query Frame = 0
BLAST of Cp4.1LG02g07170 vs. ExPASy TrEMBL
Match: A0A6J1J438 (probable transcription factor KAN4 OS=Cucurbita maxima OX=3661 GN=LOC111481162 PE=4 SV=1) HSP 1 Score: 343 bits (879), Expect = 8.99e-118 Identity = 179/205 (87.32%), Postives = 184/205 (89.76%), Query Frame = 0
BLAST of Cp4.1LG02g07170 vs. ExPASy TrEMBL
Match: A0A6J1F986 (probable transcription factor KAN4 OS=Cucurbita moschata OX=3662 GN=LOC111443475 PE=4 SV=1) HSP 1 Score: 206 bits (525), Expect = 2.35e-63 Identity = 133/244 (54.51%), Postives = 157/244 (64.34%), Query Frame = 0
BLAST of Cp4.1LG02g07170 vs. ExPASy TrEMBL
Match: A0A5A7UT98 (Putative transcription factor KAN4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1312G00080 PE=4 SV=1) HSP 1 Score: 204 bits (519), Expect = 2.01e-62 Identity = 126/244 (51.64%), Postives = 149/244 (61.07%), Query Frame = 0
BLAST of Cp4.1LG02g07170 vs. ExPASy TrEMBL
Match: A0A1S3C0D9 (probable transcription factor KAN4 OS=Cucumis melo OX=3656 GN=LOC103495027 PE=4 SV=1) HSP 1 Score: 204 bits (519), Expect = 2.01e-62 Identity = 126/244 (51.64%), Postives = 149/244 (61.07%), Query Frame = 0
BLAST of Cp4.1LG02g07170 vs. TAIR 10
Match: AT5G42630.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 147.1 bits (370), Expect = 1.5e-35 Identity = 109/249 (43.78%), Postives = 139/249 (55.82%), Query Frame = 0
BLAST of Cp4.1LG02g07170 vs. TAIR 10
Match: AT5G42630.2 (Homeodomain-like superfamily protein ) HSP 1 Score: 139.0 bits (349), Expect = 4.2e-33 Identity = 96/195 (49.23%), Postives = 122/195 (62.56%), Query Frame = 0
BLAST of Cp4.1LG02g07170 vs. TAIR 10
Match: AT4G17695.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 123.2 bits (308), Expect = 2.4e-28 Identity = 71/141 (50.35%), Postives = 95/141 (67.38%), Query Frame = 0
BLAST of Cp4.1LG02g07170 vs. TAIR 10
Match: AT5G16560.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 114.8 bits (286), Expect = 8.4e-26 Identity = 72/146 (49.32%), Postives = 92/146 (63.01%), Query Frame = 0
BLAST of Cp4.1LG02g07170 vs. TAIR 10
Match: AT1G32240.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 112.5 bits (280), Expect = 4.2e-25 Identity = 70/146 (47.95%), Postives = 91/146 (62.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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