Cp4.1LG02g06390 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG02g06390
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Descriptionpre-mRNA-processing protein 40A-like
LocationCp4.1LG02: 1201398 .. 1213335 (-)
RNA-Seq ExpressionCp4.1LG02g06390
SyntenyCp4.1LG02g06390
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CACTGTCATTTTTTTTTTCACTTAAACCCTAAAACTCGATTGAACCCGTAGGCTCCGGGTACCGACCACTCCGGTTTCTTACCCGTTATTAGCATTGGTTTTGGCGCCATTATTTTGCCCACCGCAGCGTATAGCCATAACTGTGAGTAATCTAATTCCCTCTCGTTCTTTAGGCGCTTTGGTATCGGATTCTGCATTTTTCTATCAAGTTTCGAAGAAAAATTCGTGCTAAGGGAATGGATTTGAAAAAACATGTTTAACGTGGAGGTGATTCTTTCACAAATCTTTATATATTCTTAAGAACACTGCGGTTTACCTCGAGAAAGTGAAGTCCAGTGGAAGCAAGGATTCGGGTGTGCAGACGCATCGAGGAGCTAATCGTAATCTCCATTGCTTCTTTGAGAGGAAACTTGTCTCTTGGGAATCGGTCGTCCTTCTTGTCTTGTATGGTGTTGTTGTGACTTCTTGGAGATTGAGAAGTGAGAACCTCAAGAGTGAAAGTACGGGGATAATCACATTCACGCCGCATGCGGCAGGATTATTTGTTTCTCACCCAGTTTTGAATTTGGAGGGTTTTTAGGATATATAGAAATTAAGAAGGGTGATGCAGTGAGACGTTTCAGTAGGTTTAAGTTGTTTAGTCGATTCTTTATGGTCCTTGCCTAATCATACAGGCCTTAGCGTCGAAACTATATACTATATGTAACTTTTTGAGACGTTTAGTCTACGAAATTGTGACATGTTTCTGAGTTCTCTTCCCGCTCTCTTTAATTATTTCATAGGACACATTGAATGACACTTTGTGATTGACTGGGATGCAGTGGATTTTACTTTAGCCCTGCAGTAATGGGTTGATTTTCGATTCCATCGTCCAGGAAATCAGTCTTGGAAATTTGAAATTAGATAATTTGTTTGATTGGACACACCTTCGGATCCAGTTACTTATTTGTTGACTAACATTTCTAAGTTGTTTGCAGCTGGGTCTCCATTTATTGCTTTTGGTGGACTTCAACTAGGAATTAGCTAGCTGATCTGTCGGTATTGTGATCTCTGGTTACCTTTTTATGCTCAAAGCTTGACGTTCTGTTAAGCTCTGAAATGGATAATCTATCTCAGGCCTCAGGCGGACAGGTAAAGAACCTTTTCTCAGTTCTCAATTAACATCTCTGATTTTAGTTCTTTGCATGTGTGTGTACGTATAAAAGTACTTATATATATTTTATTGCTTACACTTGCCGATTTGAGCTCAGACATTTATTTTGTCTGTTCAATTATTATCTTATTTTTGAAATATTCCCGTGACTTCTCCTTCCTTTTTGGTGCATTAGTGTGTTTGTCTCTTTTGATTCTTTCCATGTATGTTCAGTTCAAATTTCTAAATTGTGGTTCACTGATTCCTGCAGGGTTTTATTTGGTTACTTATTTGTTATGATATTTGGTCAAGTCTATATTCTATTTATGTCTATCGAGTTGATGTGAGTGTCTGAGATTTTTCTGCTGCAGTTTCGACCTAATATCCCAGCACAACCAGGCCAGACATTCATTTCCTCATCTGCCCCACAGTTCCAGTCAGCAGGGCAGAATATATCTTCTTCAAATGTTGGAATTCCAGCTGGTCAAGTCCAGCCACATCAGTATCCTCAATCAGTGCCACAGTTTGTGCCAAGGCCAAGCCATCGAGGCTATATCACTCCTTTGTCCCAGGGTATTCAAATGCCTTATGTTCCGACAAGGTCTCGTACTTCTGTTCCACCTCAGAGTCAGCAAAACGTGCCTGCACCAAATAATCAAATGCATGGTCTGGGTTCTCATGGACTACCTATTTCTTCACCATATACTGTAATCCTCTCATTCATTGCGCATTGTTTACTTTCTTTTCTGTTAATTTGAAAAGCCATTTTTTGTATTTTTATTTTATGGTACATTTTCATGTCCTCTGACTGACACTAAATGATGTTGGTTTCACTTCTGATTTCCAGCCAATGTCACAAATGCATGTACCTGTTGGAGTTGGTAATAGCGAACCTTTGATGTCTTCTGTAAGCCAGGCTACAAACTCAGTCTCACAGATTGAGCAAGCTAACCAGCATTCTTCAGTTTCTACCGTAAACCTAGTATGTTCTGCTTGTTTTATTTGTCTACTTCTATCTTCTTTGATTTGAGGGATGATATGCTATAGATCTTGTATGAAAAAAGCTAGAGATGGACTTCAATTTATTTTTATTTTTCTTTTGATTGGAATTTATACGTACTTTCTCTTCTTTGACTTATTGAAAATGTGGTCTTATGTATTAAGGCATTGATAAATGTTCTTAGGCAAGCATGGATGAAGTTAGAGATGTGGAAAGTGAGTTGGTTTTTGTGGAAAGTAGTAGTATGTAATGCCCACATTGGGGAAAAGGTCTGTTTTTTCTTAAAAAAAATAATATAGTATTTTTCTTTGAGGCATTAAGACAGTTTTCTGATGTGAGCTCCTCAGTGCTATTAAGATGCTGATTTCTATATCCTGACGGGTTTTTTTTTCACGTCATTTATAACATCAGGCTGCTAATGTTCCTGTCTTCAATCATCCATCTGATTGGCAAGGGCATGCATCAGCTGATGGAAAAAGGTAATCATGCATTTATCACCTGGTTACAGCTTTCTCATTTCTTGAAATCCAAGGTTTAAATATGTCAACTTAATTGTCGAGGTTAAACACAGTTAATTACTAATTTTCAGTTTGTATACACAGTTCACCCATTGTTTCTAGCACTCTGCAATTCTCTTGATTTCTCTTACTGAACAGAAATTTTTTCTAGGTACTATTACAACAAAAAAACCAAACAGTCCAGTTGGGAAAAGCCATTGGAACTTATGACACCACTTGAGGTAAATGTCATTTTTATGAATCATCTTTTATTCTTACCTATAACATCATAGCACATCTGTTAAAGAAAAGGTATTTATACAAGGCATTCTTTTTCATTTCTAAACAAAATTCATGGTTATAGATGCCGTTATTAGAATTTTCTTTTAGATTCATAGGTAAACTTTTGGGGCTGGGATGTATATATAGTGGCTCCATGGAAAAGTATTCTTTGGGGTTGGGATGTATAATTCAAAATCATGATTTTTCTGGCTATTCTATCAATTCAGGGATCAGTGTGATTTTCTAGACTGATAATTTTTCTAGACAAGCATCTATTTTATGTACATACATTTTCTCTGCATAGGGTATAAAGGTTTTCGTTATCAGATATCTTATTTAACTATTGTTTTTTTGTCCTCTTTTGTGTTCATTAACCGGTGCAATATCTTTAAAGCTCTTTGGATATTCGTTGTTGGAGGACAACTAGCTCAAATTTCTTTTTCCAGTATTATATGTTTGCTTCTGATTCAAATAATTGTTACAGAGAGCTGATGCATCAACTGTGTGGAAGGAATTTACGTCTCCAGATGGAAGAAAGTGTGTTGCTTTGTCTCTGTCCTCTTTGGCATTAGCCTGGCCACGTTCACATTTTTCAAGTTTTTTTTAGTGTGTTACATTTCTTGATCTTCATGAATAAGCATGTACACTAATGGTTTACCACGAGGTGAAACAGGTACTATTACAATAAGGTGACAAAAGAATCAAAGTGGACCATGCCAGAAGAACTGAAGGTTGAAATCATGGGTTACATTTCACTATCTTTCTTTCTCATGTTTCCTTTCAAAAGGAGTCATGGCTTTCAATCTAATTTTGTTAATTTGCTTGCAGTTGGCTCGCGAGCAGGCTCAAAAAGAATCTGTCCAAGGAACACAAACAGATATGGCTGTTACAACGTCTCAACCTACACCTACTGTTGGTCTTTTCCATGCTGAAACGCCGGCAATTTCTACCATTAGCTCCAGCATTTCTCCAACTGTTTCTGGGGTTGCATTGAGTCCAGTTCCAGCTGCTCTTTTTGTTTCTGGTCCTCCTGCTGTGGTCCATGCCAATGCTTCGTCAATGTATGTACTAGTCTTGCTGATATAGTTTCCACATCCACTTTTTCTTGGATAGCAGCTCCAAGTGCGCATATAGTTCCAGTTTTGTTTTGCTCATTGTTGCCTTTGTCCTTCTGAAAATAGGACTGCTTTTGAAAGCCTTGCATCTCAAGATGTAAAAAATCCTGTTGATGAAACTTCTACGGAGGACATTGAGGTAATTTGTGGGAGATTTTTGTCTTATACTTTTTGCCTCATAAATGATATTGGTTTCTATACATTTCTGAAAACTTTATTTTAAATCAAGATCTTTCTACTTCTAAATTCGAATAGAAACTAGGTTGATTTAGTTAGTTAATCTAAAATTTGAATAAAATTTGGCTCATTAGTTGTCTACTAGTTTTTGATATAATCTTGGGTGTCATGACAGGAAGCAAGGAAGAGAATGGCAGTTGCAGGAAAAGTTAATGAGACTGTCTTAGAGGAAAAATATGCTGACGATGAACCATTGGTATTCGCCAACAAGCTGGTACTTTCTGAAAAACATCTACTCTTTACATACTTTTGGAGAGAGAGAAATTGAGTACCCCATGGTTGTAATTGTGAATATATTTACCTGTGCATTTTTTTTTCATTATTATTGTATTTATTTTCTATTTTAAAAATATATTTCAATCATTAGGAGGCAAAGAGTGCATTTAAAGCGCTTCTGGAATCTGTAAATGTTCAGTCTGATTGGACGTGGGAGCAGGTTTGTTTGGTCTAGGCATCATGCAACATTTTTCAGTTTTCATCATATTTCATATACGCTAATTCAATGTGTTCAGGCTATGCGAGAAATAATTAATGACAAAAGATATGGCGCCTTGAAAACTCTTGGTGAGCGGAAGCAAGCTTTCCATGAGGTATCGATATGACTGGACTACAATGAAGTTTTATTGAAATGATTGGAATGAAATAATGCTTTGGTTCACCCCTTTCCCCTACATTTTTTTTCTTTACAACCAAGGTGGATCAGACTTTATTATTCTTTTGATGAATTTTTATGAGTTTAGTATTTAGGACATAGAAAAAAGTTGGATGCAGAAGAAAGACGCATAAGACAGAAAAAAGCTCGTGAGGAATTCATCAAGATGTTGGATGTAAGTTTTTGTATACAATTTCTCCTGTCATGTTCTCTCTATTATTTTTATTTGATTGTTTTAGAGATCTTGATTTTTGCTTGCATATGCATTTTAATTTCAGGAGTCCAAGGAACTCACATCATCTACCAGATGGAGGTTGGGTTCTTAGTTATTATTTATTGTTATCATTATTTATCTTACAAGTTCGTAATTCCTCTTGACCTTATATTTTTTTCCTTTCCAATTTTTGTGGGACAGCAAAGCCGTTAGTATGTTTGAGAATGATGAACGGTTCAAAGCCGTTGAACGTTCTAGAGATCGGGAGGATCTTTTTGAAACCTGCATAGTGGAACTTGAGAGGAAGGTAGGAATCGTTTGTTTATTCATGCATGTGCATGCGTTAGTAGTATCCTGTGAGAAATTTCCCCTTGTAGGCAGGTGAATGTGAGCCGATGGTTGTGTAGAGAAAATAAAAGAGGACTCAGAATTTTTTTTTTTTTTTTTTTTGTAAGTTTGAAATTTGTACTGACTGCACAAAGAACTAACCAAAAGTAGTAAAAACGGGAAAACATCTTGGTTCCCAATTTTATTAATTGAACCCACCAATAATGATTACCAAATTGACTCTGTGGATGGCAGTACTGAGATGTTGCTTGCCTATTCTTTTGGAGTCATCTCCCTGCTTGATTTTTCATCTAGTTTTGTGCCCTTTCTCCTCTCTCCTCTATCTAGAATCTTATAATCTCCAAAGACGTCAATTTTCTTGCTTGAGAGGTTGAGGAATCCACGAATGAGTTTTGTTGTTAACTCTTTGTGGGTGGTGGCACTCTGGTTTTTTGTAATTATTAGCTAGGGTCTTATCCTTTTGGATTGGAGTGTGTTTCTTATTTAGTGTCTAGTCTCCTCTTGCGGGGCTGAGTTTTTATTTTTTCATACCCTAGTACATTCTTTCATTTTTGTCCATGAAAGTTGGATATTTCTTTTTAGAGAAATGCCATGGACAATTTTTTTTCTTTCTTTTTTGTTCCTGTTACAATATAGTATTGCAATCCTTTTTAGGATGTTGGTTTGGAATTTTGTTGATGTTTTATTTTTGATCTTATTAAATGATATCATTTTTGTATTAAGAACATTTCAATCAACAGGCCCGAAGAAAAATATTACAAACAATTTATTTTTAGTGTGCGAGAGTAATGGGGGCTTTCATTGTACTTTGACGATAGTACTTCTTCATTTGATAATTGTGATGTTGTCCTGTACTCTTGATAAGTTGATATTATAACCTTTTTTCTATGTTGGAGTGCATGAAATTACCTTTTTCTAGATAAGGGAACGTTCATACACTCTTAAATTCAGGAAAAAGAAAGGGCTGCAGAGGAGCACAAGAAAAATATTACTGAATATAGGGAATTTCTTGAGTCTTGTGATTACATAAAGGTATTTTCCCTCAGGCTTTGGGATGTATAAATTTACTTATTCCTTATTATGCCTTATTCTCGCGATTGTTTTCTGTGGTTTAGGTGAGTAGCAAATGGCGGAAAGTACAAGATCGATTGGAAGTTGATGAGAGATGCTTATACCTTGAGAAACTTGATCGCTTGCTTATTTTCCAGGCATGTCCTTTTCATTTTTATTTGATTTTCTGTTTGTGTATTCCAACTTAAATTTTATGCTGTATTTGATTGGTACAGGACTATATGCGTGAGTTGGAAAAGGAGGAAGAGGAACAGAAGAAGATACAAAAGGTTTTATTGTACATCAGTTCATCATATGACAGTTGATTCTATTTTATTAAGTACATAGGACACTCACATTCACATTTAACCATTTGAAGGGACGTTTGCGAAGAATTGAAAGAAAAAACCGCGATGAGTTCCGCCAACTCATGGAAGAACACATTACCGCTGGTGTTCTTACAGCTAAGACTTTTTGGCGTGATTACTGTTTGAAGGTAGAGAACTTTTTAATCTTCTGCTGAACATTGAAATCTGGATTAGGAATCTTTCCCCACATCCCCGATTGTCTTTTTTTTTTTTCAAGGTTAAGGAGTTGCCTCAGTATCAAGCTGTTGCTTCAAATATATCTGGCTCAACACCAAAGGACTTGTTTGAGGATGTTCTGAAGGAATTAAAAACTAAGGTGATCTTCTTATCATACTTTGTTATAGAAATTTTGTTAGTTCTATAATTTCTTTTTATTATCAAAGATAAATAGGAACTAGTGATTTATTACTCTAATAGCCTACCATCAGGTAAAGCATTTCATAGGATTTGTGGTTTTCATTGTGTGTATGCTAGGACTCATTTTAAGATAATTTTCTCTGTCTTTCTCCCCTCTCCACCCTTACTTCCTTTCTAACCTTTTTCCATGCAATATTATCCACTATCTTATGCGTATATACAAAAATAATTAACATATTGTGAGTAAATATACCAAGAAATGCATTGTGAATAAAGGTATTTAGCATGTCTTTTGTCCTTGGGTCTTTTCCCTGTAGAAATTCTTTTGATGATTGGGAATAACATGAGATCACAAACTTCACTAAAGCTGTAGAGCATCTTCCTTTTGGAGGTATGATTTTCATTCGAAAGCCTCTTCCGACCATGTAACGTCCAGTTTTTGATGCCTGAACTTTCAGCAACCTTATCATCTTCCCATCCAATCAAAATCATGAATGTAATTTTTTGGCCTATGTAATGGAGAAACAGAACTTGCTAAACCCCCATTACTACGTTGTGAAGTTGTATCCAATGAACTTGGCTACGAACTTCTTGGCTGGTAAATTAAGTACATCCGATCAAGATTTATGGAACACTGTTTTTGAATTCAGGCAGATAGTATTTCCATGCCATTGTTATGGGGGGAGCGTAGGTCCATCTTTAGCAAGTTCCTGTTTCTTGATTGAGTTTCTAGTCCAATTGATCTTAGTCAAACTTAGCTGATGATAGGGGTTGTTGCATCTACAAATCTTGTTGCTCGGTGAATTCCCTCTGTTCATCATCTTGAATTCTCCTGAAGTACATGTTTAATCTGAAAAAATATTTCAGGACTGCGTGCATTCTTTTTACCTCCAAAAAATCGTTTCAAAATGCATTGATGGATTCTATCTCATTTTATTTATGTAATTTATGTTATTAGCTCAATTGTCTGCATTATATATATTAGAAAAAAATGTCCGTGTTATATTATTGTTGAATCCAAAGTGCTTTTGAAATTTTACTGTCAAGCTCACATTTTCCATTTTTTTTTTTTTAAATTTCTAGTATCACAAAGAAAAGGCTCAGATAAAAGATGTGATGAAGGCAGCGAAGGTAGTATGATTATAATCTTTATGAACGGCTACTGCTGCTGAATTCATTTTTATTTGAATGGAATGCTTTTCAGGTTACCATCACTTCATCATGGACATTTGATGACCTTAAGGCTGTCATTGAAGAGGGTGCTCCTCTTGCACTTTCAGATATAAATTTTAAGGTACTACTTAAAATTGGCCAAAGTTGTCTAAAAGTTTGGAATTGTTTCGTGTGTTTTCTCTTTTAAAATTCTTTTATAAATATTAATTTACACTTTTTTTTTTTTTTTTTAAAAAACTTAAACTTTTCATTAAAAAAAAAATGAAAAGAGGCTAATGCTCAAAAGATTCAAACTTTTCAAGGGGTGGATACCAAAAAGAGTAAATAAAAGAAAATACAAAGGAAAAATGATGGCTTACCAAATAAGACATAAACCAAGATAGGAAAAAACAGCGAAGTGCTTGTTTAGAGAACACCGTGATGGGACGTATGAACTTCTAGATTCAAACTGATTAAACTGATGGAGATACTTCTCGTTGAAGATTCTTTAATTCCTAACCATGCACAAAACTTTCCATTCTGTGTTGTAGCCTTCACTTCAAACAAAAGTCTTCTTGTATAAGGTTCTATATCAGGCATTTGCAAGACTAAGACAACCGAAAATGAGAGCTTCATTTGAAGGAAACTTCTAATTTCTGTTGTATTCCATATTGATGACCTTATTCTCAATATAATCTTAAACAAAAAAAGATTGACATCACCAAAGCCAATATCTTCCGCAATATAATCTCCAACTATTTTCCTACTCGTACATTTGCATGACCACTCTAATCAAAATAACCACAATCTTCTAACATGTTGGCATTGGAATGGATCAATTTGCACACATTCAGGAAATAACGGCAAAGCGTTTGGTCAATCCTCAAATAAAAAATATATGAGCTAACCCGTTTATCCCTCATCCTTGTGAATTCCAAGAAATTTTCTTCATTGGAAAATAAAGAACAACAATAAAAAATTAATCTTCCTGACTTGACTCCCTCGGGAACATAAGGGGAAATCTCCCTAAGTTGCAGAAATTTATCTGGTCTCAAAATATCACTTTCATCTGAAAAGAATGAGATAAAAGGAAGCTTCAAACATGTGGTTCTACTTTAAGAAATTTGCTGGAGTTGTCGAAAAATTTGGAACTGCTCTTGTTCTCTTTCAAAATTCTTTTTTAAATATTAATTTGATTGTATATGCTTAATTTGTTCTGCAGCGCCAATCTGTATAATGAGTTTTTTTTTTCTTATTGTAGTTTCAATCTTTCATTTTTTTTTCTGAAATACAATTTGGATTTTGGCTTTGTATGTTGGGGCAATTAAGATGCTCAGAATCTGAAGATAGAGATATTTATTCTGTATCTTGAGTAATTGAATAATCTTAGTTTCTGATTACTTGGTCCTCTGAAGACTATGGATATATTCGTGTTCTTTCACAATTATGTCTTTTATTATTGTTTAGGATGCAATATGTTATCCCATAAATTTCTGGTTGTTTTTTACAAAGGAAAAATAGAAATTGGCCAGCCTGGAAAGCTGAGGGCCTAGCCCGTCGTCTGTGAATTGATTCTTACTCACAATTTCCCAATGTCTACGCTTATAAATCCTCCTCTATGGAAAACTTCATTGCCTTGTCTGTATCTTTAATTTTGTATCCTTTGATTTGTTATCAACATGATACGTGTTTTGAGACATTAATCACATCCTACTATGTTGAAGCTTGTATATCAGGATTTACTAGAAAGAGCCAAAGCAAAGGAGCAGAAAGAAGCCAAAAGGCGTCAACGTTTGGCTGATGACTTCTCAAGACTGCTTCAGTTATTCAAGGTATTTTTAGAACTGTTGATGATGTGTAAGCTCATTTCAGACCGACTGTCTTCTCTAACAGTTAGTTGACCTTCAATGGTTGTATTACCACAGGAGATTTCAGCTTCTTCCAACTGGGAGGATAGCAAACAGCTTTTTGAAGAGAGTGAAGACTACAGGTAGTTTATGAAGATGTTGATTATTTATCATAAACGAGGTTTGGGTACTCAATTCTCTGCTTTATTTGACTTTTTTTCTTCTACTGTCACTTAGATCAATTGGGGAAGAGACCTTCGCGAAGGAAGTTTTTGAGGAATACGTAGTGCATTTACAAGAAAAGGCAAAAGAAAAGGAACGCAAGGGTGAGGAGGAGAAGGTGTGTGGCAAATTGCTTTTATGCTTGATTAGTTTGATGATTCTACTTTTCAGTCGTTGGGTGAAGAATTATAAGTGGAACGATATTTTAGGCTTTAAGCAACCAACTGATCTGAAAAACTGAATAAACATAGCCCAAACGACCATTGGTTGGTTTAAGTTCAAATGAAGTGAATTTGTTTGAATTGGTTTAATTTTTGGTTTATATATGCATACATGTCTTTTCCACAATGTTTTTGGTTTATGTACATATAATTTAGGTTTTATTTTTTTCTTAACGAGAAACCAAGTTTTCATAAATTTTAGAAATGGGGATCATTGTTTTTCTTTCTAATGCTATTCTAAATTTCTAACAAAAAAGTATTTTTTTATTATTATTATTTTGAAGCCAATCCCTCGGTAGTTCAGATCTTCTGTTGAAATAGATGATTCCTCGATAACTTTGACTGAAGTGTAATAAGATACTGTTCGGAATTTTTTTCTCATTCTCAGAAGAGAACTTCTATTTTGCACAGGCTAAAAAGGAAAAAGAATGCGAGGAAAAGGAGAAAGAGCGAAAGGAGAAGGAAAGAGAACGTGAAAAAGAAAAGGGACGTGTTAAGAAGGATGAAACTGATAGCGAAAATATAGATGCAAACAAAACTCGTGTCTACAGAGAAAAGAAAAGGGAAAAAAACAAAGACAGGAAACGTCGGAAGCGGCATCATAGTGCCACTGATGATGGTGGTTCTAATAAAGATGAGAGAGAGGAGTCTAAGAAGTCTTGCAAACGTGGCAGTGACCGAAAAAAGTCAAGGAAGGCACGTGAATATCCTTGTAGATGCTTGTGACACTGTGTTGTATAACGTTATTAGAAATTAATTCTCTTTGTATGTTTCTTGGCAGCACGCATATTCACCTGAATTAGACAGTGAGAGTAGGCACAGAAGACACAAGAGAGAACATCGAGATGGTTCATGTAGAAATGACGGACATGATGAACTTGAAGAGGGGGAGCTTGGAGAGGATGGGGAAATTCAATAGCCGTCGTTAGCTTTCGATTTCAGGATTTGGTTTCTACGGTTTGCAAGGGCAGAGCGATCAATGTGATTTTAATTGGCCAGGGATGGCAACTGCTGAAAAGAATTCTTTTGAAGAGGAGATGAAGGGTGACCCAGTTATCATTCTTCCATTGTCTGTTAGTGGATACATCTGTAGTGTCCTACAGGAGTTAGTGGCGTATATAAACCAGCCATTTTTATTACTTGTGACCTGGTTTTGTAAGTCGCTACTTCCCTCGTCTACTGTAATTCTGTCGAGAATAATAAATCCACAGGCTGCTTATTTGCGGTTCTCTCAACTGATTTGA

mRNA sequence

CACTGTCATTTTTTTTTTCACTTAAACCCTAAAACTCGATTGAACCCGTAGGCTCCGGGTACCGACCACTCCGGTTTCTTACCCGTTATTAGCATTGGTTTTGGCGCCATTATTTTGCCCACCGCAGCGTATAGCCATAACTCTGGGTCTCCATTTATTGCTTTTGGTGGACTTCAACTAGGAATTAGCTAGCTGATCTGTCGGTATTGTGATCTCTGGTTACCTTTTTATGCTCAAAGCTTGACGTTCTGTTAAGCTCTGAAATGGATAATCTATCTCAGGCCTCAGGCGGACAGTTTCGACCTAATATCCCAGCACAACCAGGCCAGACATTCATTTCCTCATCTGCCCCACAGTTCCAGTCAGCAGGGCAGAATATATCTTCTTCAAATGTTGGAATTCCAGCTGGTCAAGTCCAGCCACATCAGTATCCTCAATCAGTGCCACAGTTTGTGCCAAGGCCAAGCCATCGAGGCTATATCACTCCTTTGTCCCAGGGTATTCAAATGCCTTATGTTCCGACAAGGTCTCGTACTTCTGTTCCACCTCAGAGTCAGCAAAACGTGCCTGCACCAAATAATCAAATGCATGGTCTGGGTTCTCATGGACTACCTATTTCTTCACCATATACTCCAATGTCACAAATGCATGTACCTGTTGGAGTTGGTAATAGCGAACCTTTGATGTCTTCTGTAAGCCAGGCTACAAACTCAGTCTCACAGATTGAGCAAGCTAACCAGCATTCTTCAGTTTCTACCGTAAACCTAGCTGCTAATGTTCCTGTCTTCAATCATCCATCTGATTGGCAAGGGCATGCATCAGCTGATGGAAAAAGGTACTATTACAACAAAAAAACCAAACAGTCCAGTTGGGAAAAGCCATTGGAACTTATGACACCACTTGAGAGAGCTGATGCATCAACTGTGTGGAAGGAATTTACGTCTCCAGATGGAAGAAAGTACTATTACAATAAGGTGACAAAAGAATCAAAGTGGACCATGCCAGAAGAACTGAAGTTGGCTCGCGAGCAGGCTCAAAAAGAATCTGTCCAAGGAACACAAACAGATATGGCTGTTACAACGTCTCAACCTACACCTACTGTTGGTCTTTTCCATGCTGAAACGCCGGCAATTTCTACCATTAGCTCCAGCATTTCTCCAACTGTTTCTGGGGTTGCATTGAGTCCAGTTCCAGCTGCTCTTTTTGTTTCTGGTCCTCCTGCTGTGGTCCATGCCAATGCTTCGTCAATGACTGCTTTTGAAAGCCTTGCATCTCAAGATGTAAAAAATCCTGTTGATGAAACTTCTACGGAGGACATTGAGGAAGCAAGGAAGAGAATGGCAGTTGCAGGAAAAGTTAATGAGACTGTCTTAGAGGAAAAATATGCTGACGATGAACCATTGGTATTCGCCAACAAGCTGGAGGCAAAGAGTGCATTTAAAGCGCTTCTGGAATCTGTAAATGTTCAGTCTGATTGGACGTGGGAGCAGGCTATGCGAGAAATAATTAATGACAAAAGATATGGCGCCTTGAAAACTCTTGGTGAGCGGAAGCAAGCTTTCCATGAGTATTTAGGACATAGAAAAAAGTTGGATGCAGAAGAAAGACGCATAAGACAGAAAAAAGCTCGTGAGGAATTCATCAAGATGTTGGATGAGTCCAAGGAACTCACATCATCTACCAGATGGAGCAAAGCCGTTAGTATGTTTGAGAATGATGAACGGTTCAAAGCCGTTGAACGTTCTAGAGATCGGGAGGATCTTTTTGAAACCTGCATAGTGGAACTTGAGAGGAAGGAAAAAGAAAGGGCTGCAGAGGAGCACAAGAAAAATATTACTGAATATAGGGAATTTCTTGAGTCTTGTGATTACATAAAGGACTATATGCGTGAGTTGGAAAAGGAGGAAGAGGAACAGAAGAAGATACAAAAGGGACGTTTGCGAAGAATTGAAAGAAAAAACCGCGATGAGTTCCGCCAACTCATGGAAGAACACATTACCGCTGGTGTTCTTACAGCTAAGACTTTTTGGCGTGATTACTGTTTGAAGGTTAAGGAGTTGCCTCAGTATCAAGCTGTTGCTTCAAATATATCTGGCTCAACACCAAAGGACTTGTTTGAGGATGTTCTGAAGGAATTAAAAACTAAGTATCACAAAGAAAAGGCTCAGATAAAAGATGTGATGAAGGCAGCGAAGGTTACCATCACTTCATCATGGACATTTGATGACCTTAAGGCTGTCATTGAAGAGGGTGCTCCTCTTGCACTTTCAGATATAAATTTTAAGGATTTACTAGAAAGAGCCAAAGCAAAGGAGCAGAAAGAAGCCAAAAGGCGTCAACGTTTGGCTGATGACTTCTCAAGACTGCTTCAGTTATTCAAGGAGATTTCAGCTTCTTCCAACTGGGAGGATAGCAAACAGCTTTTTGAAGAGAGTGAAGACTACAGATCAATTGGGGAAGAGACCTTCGCGAAGGAAGTTTTTGAGGAATACGTAGTGCATTTACAAGAAAAGGCAAAAGAAAAGGAACGCAAGGGTGAGGAGGAGAAGGCTAAAAAGGAAAAAGAATGCGAGGAAAAGGAGAAAGAGCGAAAGGAGAAGGAAAGAGAACGTGAAAAAGAAAAGGGACGTGTTAAGAAGGATGAAACTGATAGCGAAAATATAGATGCAAACAAAACTCGTGTCTACAGAGAAAAGAAAAGGGAAAAAAACAAAGACAGGAAACGTCGGAAGCGGCATCATAGTGCCACTGATGATGGTGGTTCTAATAAAGATGAGAGAGAGGAGTCTAAGAAGTCTTGCAAACGTGGCAGTGACCGAAAAAAGTCAAGGAAGGCACGATTTGGTTTCTACGGTTTGCAAGGGCAGAGCGATCAATGTGATTTTAATTGGCCAGGGATGGCAACTGCTGAAAAGAATTCTTTTGAAGAGGAGATGAAGGGTGACCCAGTTATCATTCTTCCATTGTCTGTTAGTGGATACATCTGTAGTGTCCTACAGGAGTTAGTGGCGTATATAAACCAGCCATTTTTATTACTTGTGACCTGGTTTTGTAAGTCGCTACTTCCCTCGTCTACTGTAATTCTGTCGAGAATAATAAATCCACAGGCTGCTTATTTGCGGTTCTCTCAACTGATTTGA

Coding sequence (CDS)

ATGGATAATCTATCTCAGGCCTCAGGCGGACAGTTTCGACCTAATATCCCAGCACAACCAGGCCAGACATTCATTTCCTCATCTGCCCCACAGTTCCAGTCAGCAGGGCAGAATATATCTTCTTCAAATGTTGGAATTCCAGCTGGTCAAGTCCAGCCACATCAGTATCCTCAATCAGTGCCACAGTTTGTGCCAAGGCCAAGCCATCGAGGCTATATCACTCCTTTGTCCCAGGGTATTCAAATGCCTTATGTTCCGACAAGGTCTCGTACTTCTGTTCCACCTCAGAGTCAGCAAAACGTGCCTGCACCAAATAATCAAATGCATGGTCTGGGTTCTCATGGACTACCTATTTCTTCACCATATACTCCAATGTCACAAATGCATGTACCTGTTGGAGTTGGTAATAGCGAACCTTTGATGTCTTCTGTAAGCCAGGCTACAAACTCAGTCTCACAGATTGAGCAAGCTAACCAGCATTCTTCAGTTTCTACCGTAAACCTAGCTGCTAATGTTCCTGTCTTCAATCATCCATCTGATTGGCAAGGGCATGCATCAGCTGATGGAAAAAGGTACTATTACAACAAAAAAACCAAACAGTCCAGTTGGGAAAAGCCATTGGAACTTATGACACCACTTGAGAGAGCTGATGCATCAACTGTGTGGAAGGAATTTACGTCTCCAGATGGAAGAAAGTACTATTACAATAAGGTGACAAAAGAATCAAAGTGGACCATGCCAGAAGAACTGAAGTTGGCTCGCGAGCAGGCTCAAAAAGAATCTGTCCAAGGAACACAAACAGATATGGCTGTTACAACGTCTCAACCTACACCTACTGTTGGTCTTTTCCATGCTGAAACGCCGGCAATTTCTACCATTAGCTCCAGCATTTCTCCAACTGTTTCTGGGGTTGCATTGAGTCCAGTTCCAGCTGCTCTTTTTGTTTCTGGTCCTCCTGCTGTGGTCCATGCCAATGCTTCGTCAATGACTGCTTTTGAAAGCCTTGCATCTCAAGATGTAAAAAATCCTGTTGATGAAACTTCTACGGAGGACATTGAGGAAGCAAGGAAGAGAATGGCAGTTGCAGGAAAAGTTAATGAGACTGTCTTAGAGGAAAAATATGCTGACGATGAACCATTGGTATTCGCCAACAAGCTGGAGGCAAAGAGTGCATTTAAAGCGCTTCTGGAATCTGTAAATGTTCAGTCTGATTGGACGTGGGAGCAGGCTATGCGAGAAATAATTAATGACAAAAGATATGGCGCCTTGAAAACTCTTGGTGAGCGGAAGCAAGCTTTCCATGAGTATTTAGGACATAGAAAAAAGTTGGATGCAGAAGAAAGACGCATAAGACAGAAAAAAGCTCGTGAGGAATTCATCAAGATGTTGGATGAGTCCAAGGAACTCACATCATCTACCAGATGGAGCAAAGCCGTTAGTATGTTTGAGAATGATGAACGGTTCAAAGCCGTTGAACGTTCTAGAGATCGGGAGGATCTTTTTGAAACCTGCATAGTGGAACTTGAGAGGAAGGAAAAAGAAAGGGCTGCAGAGGAGCACAAGAAAAATATTACTGAATATAGGGAATTTCTTGAGTCTTGTGATTACATAAAGGACTATATGCGTGAGTTGGAAAAGGAGGAAGAGGAACAGAAGAAGATACAAAAGGGACGTTTGCGAAGAATTGAAAGAAAAAACCGCGATGAGTTCCGCCAACTCATGGAAGAACACATTACCGCTGGTGTTCTTACAGCTAAGACTTTTTGGCGTGATTACTGTTTGAAGGTTAAGGAGTTGCCTCAGTATCAAGCTGTTGCTTCAAATATATCTGGCTCAACACCAAAGGACTTGTTTGAGGATGTTCTGAAGGAATTAAAAACTAAGTATCACAAAGAAAAGGCTCAGATAAAAGATGTGATGAAGGCAGCGAAGGTTACCATCACTTCATCATGGACATTTGATGACCTTAAGGCTGTCATTGAAGAGGGTGCTCCTCTTGCACTTTCAGATATAAATTTTAAGGATTTACTAGAAAGAGCCAAAGCAAAGGAGCAGAAAGAAGCCAAAAGGCGTCAACGTTTGGCTGATGACTTCTCAAGACTGCTTCAGTTATTCAAGGAGATTTCAGCTTCTTCCAACTGGGAGGATAGCAAACAGCTTTTTGAAGAGAGTGAAGACTACAGATCAATTGGGGAAGAGACCTTCGCGAAGGAAGTTTTTGAGGAATACGTAGTGCATTTACAAGAAAAGGCAAAAGAAAAGGAACGCAAGGGTGAGGAGGAGAAGGCTAAAAAGGAAAAAGAATGCGAGGAAAAGGAGAAAGAGCGAAAGGAGAAGGAAAGAGAACGTGAAAAAGAAAAGGGACGTGTTAAGAAGGATGAAACTGATAGCGAAAATATAGATGCAAACAAAACTCGTGTCTACAGAGAAAAGAAAAGGGAAAAAAACAAAGACAGGAAACGTCGGAAGCGGCATCATAGTGCCACTGATGATGGTGGTTCTAATAAAGATGAGAGAGAGGAGTCTAAGAAGTCTTGCAAACGTGGCAGTGACCGAAAAAAGTCAAGGAAGGCACGATTTGGTTTCTACGGTTTGCAAGGGCAGAGCGATCAATGTGATTTTAATTGGCCAGGGATGGCAACTGCTGAAAAGAATTCTTTTGAAGAGGAGATGAAGGGTGACCCAGTTATCATTCTTCCATTGTCTGTTAGTGGATACATCTGTAGTGTCCTACAGGAGTTAGTGGCGTATATAAACCAGCCATTTTTATTACTTGTGACCTGGTTTTGTAAGTCGCTACTTCCCTCGTCTACTGTAATTCTGTCGAGAATAATAAATCCACAGGCTGCTTATTTGCGGTTCTCTCAACTGATTTGA

Protein sequence

MDNLSQASGGQFRPNIPAQPGQTFISSSAPQFQSAGQNISSSNVGIPAGQVQPHQYPQSVPQFVPRPSHRGYITPLSQGIQMPYVPTRSRTSVPPQSQQNVPAPNNQMHGLGSHGLPISSPYTPMSQMHVPVGVGNSEPLMSSVSQATNSVSQIEQANQHSSVSTVNLAANVPVFNHPSDWQGHASADGKRYYYNKKTKQSSWEKPLELMTPLERADASTVWKEFTSPDGRKYYYNKVTKESKWTMPEELKLAREQAQKESVQGTQTDMAVTTSQPTPTVGLFHAETPAISTISSSISPTVSGVALSPVPAALFVSGPPAVVHANASSMTAFESLASQDVKNPVDETSTEDIEEARKRMAVAGKVNETVLEEKYADDEPLVFANKLEAKSAFKALLESVNVQSDWTWEQAMREIINDKRYGALKTLGERKQAFHEYLGHRKKLDAEERRIRQKKAREEFIKMLDESKELTSSTRWSKAVSMFENDERFKAVERSRDREDLFETCIVELERKEKERAAEEHKKNITEYREFLESCDYIKDYMRELEKEEEEQKKIQKGRLRRIERKNRDEFRQLMEEHITAGVLTAKTFWRDYCLKVKELPQYQAVASNISGSTPKDLFEDVLKELKTKYHKEKAQIKDVMKAAKVTITSSWTFDDLKAVIEEGAPLALSDINFKDLLERAKAKEQKEAKRRQRLADDFSRLLQLFKEISASSNWEDSKQLFEESEDYRSIGEETFAKEVFEEYVVHLQEKAKEKERKGEEEKAKKEKECEEKEKERKEKEREREKEKGRVKKDETDSENIDANKTRVYREKKREKNKDRKRRKRHHSATDDGGSNKDEREESKKSCKRGSDRKKSRKARFGFYGLQGQSDQCDFNWPGMATAEKNSFEEEMKGDPVIILPLSVSGYICSVLQELVAYINQPFLLLVTWFCKSLLPSSTVILSRIINPQAAYLRFSQLI
Homology
BLAST of Cp4.1LG02g06390 vs. ExPASy Swiss-Prot
Match: B6EUA9 (Pre-mRNA-processing protein 40A OS=Arabidopsis thaliana OX=3702 GN=PRP40A PE=1 SV=1)

HSP 1 Score: 736.5 bits (1900), Expect = 3.9e-211
Identity = 477/939 (50.80%), Postives = 633/939 (67.41%), Query Frame = 0

Query: 2   DNLSQASGGQFRPNIPAQPGQTFISSSAPQFQSAGQNISSSNVGIPAGQVQPHQYPQSVP 61
           +N  Q+SG QFRP +P Q GQ F+ +++  F   G          P  Q QP QY Q + 
Sbjct: 3   NNPPQSSGTQFRPMVPGQQGQHFVPAASQPFHPYGH-------VPPNVQSQPPQYSQPIQ 62

Query: 62  Q---FVPRPSHRGYITPLSQGIQMPYVPT-RSRTSVPPQSQQNVPAPNNQMHGLGSHGLP 121
           Q   F  RP    +IT  SQ + +PY+ T +  TS   Q Q N P     M G  + G P
Sbjct: 63  QQQLFPVRPGQPVHITSSSQAVSVPYIQTNKILTSGSTQPQPNAP----PMTGFATSGPP 122

Query: 122 ISSPYT----------------PMSQMHVPVGV---GNSEPLMSSVSQATNSVSQIEQAN 181
            SSPYT                P SQMHV  GV    N+ P+   V+Q+T+ VS ++Q  
Sbjct: 123 FSSPYTFVPSSYPQQQPTSLVQPNSQMHV-AGVPPAANTWPV--PVNQSTSLVSPVQQTG 182

Query: 182 QHSSVSTVNLAANVPVFNHPSDWQGHASADGKRYYYNKKTKQSSWEKPLELMTPLERADA 241
           Q + V+      N+      SDWQ H SADG++YYYNK+TKQS+WEKPLELMTPLERADA
Sbjct: 183 QQTPVAVSTDPGNLTP-QSASDWQEHTSADGRKYYYNKRTKQSNWEKPLELMTPLERADA 242

Query: 242 STVWKEFTSPDGRKYYYNKVTKESKWTMPEELKLAREQAQKESVQGTQTDMAVTTSQPTP 301
           STVWKEFT+P+G+KYYYNKVTKESKWT+PE+LKLAREQAQ  S    +T ++   S P  
Sbjct: 243 STVWKEFTTPEGKKYYYNKVTKESKWTIPEDLKLAREQAQLAS---EKTSLSEAGSTPLS 302

Query: 302 TVGLFHAETPAISTISS---SISPTVSGVALSPVPAALF--VSGPPAVVHANASS----- 361
                 ++  A+ST++S   S S  ++G + SP+ A L   V+ PP+V     +S     
Sbjct: 303 HHAASSSDL-AVSTVTSVVPSTSSALTGHSSSPIQAGLAVPVTRPPSVAPVTPTSGAISD 362

Query: 362 ----MTAFESLASQDVKNPVDETSTEDIEEARKRMAVAGKVNETVLEEKYADDEPLVFAN 421
                   ++L+S+   +  D  + ++ E   K M+V GK N +   +K   +EP+V+A 
Sbjct: 363 TEATTIKGDNLSSRGADDSNDGATAQNNEAENKEMSVNGKANLSPAGDKANVEEPMVYAT 422

Query: 422 KLEAKSAFKALLESVNVQSDWTWEQAMREIINDKRYGALKTLGERKQAFHEYLGHRKKLD 481
           K EAK+AFK+LLESVNV SDWTWEQ ++EI++DKRYGAL+TLGERKQAF+EYLG RKK++
Sbjct: 423 KQEAKAAFKSLLESVNVHSDWTWEQTLKEIVHDKRYGALRTLGERKQAFNEYLGQRKKVE 482

Query: 482 AEERRIRQKKAREEFIKMLDESKELTSSTRWSKAVSMFENDERFKAVERSRDREDLFETC 541
           AEERR RQKKAREEF+KML+E +EL+SS +WSKA+S+FEND+RFKAV+R RDREDLF+  
Sbjct: 483 AEERRRRQKKAREEFVKMLEECEELSSSLKWSKAMSLFENDQRFKAVDRPRDREDLFDNY 542

Query: 542 IVELERKEKERAAEEHKKNITEYREFLESCDYIK-------------------------- 601
           IVELERKE+E+AAEEH++ + +YR+FLE+CDYIK                          
Sbjct: 543 IVELERKEREKAAEEHRQYMADYRKFLETCDYIKAGTQWRKIQDRLEDDDRCSCLEKIDR 602

Query: 602 -----DYMRELEKEEEEQKKIQKGRLRRIERKNRDEFRQLMEEHITAGVLTAKTFWRDYC 661
                +Y+ +LEKEEEE K+++K  +RR ERKNRD FR L+EEH+ AG+LTAKT+W DYC
Sbjct: 603 LIGFEEYILDLEKEEEELKRVEKEHVRRAERKNRDAFRTLLEEHVAAGILTAKTYWLDYC 662

Query: 662 LKVKELPQYQAVASNISGSTPKDLFEDVLKELKTKYHKEKAQIKDVMKAAKVTITSSWTF 721
           +++K+LPQYQAVASN SGSTPKDLFEDV +EL+ +YH++K+ +KD MK+ K+++ SSW F
Sbjct: 663 IELKDLPQYQAVASNTSGSTPKDLFEDVTEELEKQYHEDKSYVKDAMKSRKISMVSSWLF 722

Query: 722 DDLKAVIEEG-APLALSDINFK----DLLERAKAKEQKEAKRRQRLADDFSRLLQLFKEI 781
           +D K+ I E  +   +SDIN K    DL+ R K KE+KEA++ QRLA++F+ LL  FKEI
Sbjct: 723 EDFKSAISEDLSTQQISDINLKLIYDDLVGRVKEKEEKEARKLQRLAEEFTNLLHTFKEI 782

Query: 782 SASSNWEDSKQLFEESEDYRSIGEETFAKEVFEEYVVHLQEKAKEKERKGEEEKAKKEKE 841
           + +SNWEDSKQL EES++YRSIG+E+ ++ +FEEY+  LQEKAKEKERK +EEK +KEKE
Sbjct: 783 TVASNWEDSKQLVEESQEYRSIGDESVSQGLFEEYITSLQEKAKEKERKRDEEKVRKEKE 842

Query: 842 CEEKE------KERKEKEREREKEKG--RVKKDETDSENIDANKTRVYREKKREKNKDRK 858
            +EKE      KER+EKEREREKEKG  R K++E+D E           EK++ K++DRK
Sbjct: 843 RDEKEKRKDKDKERREKEREREKEKGKERSKREESDGETAMDVSEGHKDEKRKGKDRDRK 902

BLAST of Cp4.1LG02g06390 vs. ExPASy Swiss-Prot
Match: F4JCC1 (Pre-mRNA-processing protein 40B OS=Arabidopsis thaliana OX=3702 GN=PRP40B PE=1 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 2.2e-134
Identity = 374/952 (39.29%), Postives = 527/952 (55.36%), Query Frame = 0

Query: 11  QFRPNIPAQPGQTFISSSAPQFQSAGQNISSSNVGIPAGQVQPHQYPQSVPQFVPRPSHR 70
           QF P I A   +     S+  FQ  G+  +  ++G P     P Q  QS+     RPS  
Sbjct: 34  QFLPTIQAPQSEQVARLSSQNFQCVGRGGTVLSIGYPPQSYAP-QLLQSMHHSHERPSQ- 93

Query: 71  GYITPLSQGIQMPYVPTRSRTSVPPQSQQNVPAPNNQMHGLGSHGLPISSPYTPMSQMHV 130
                L+Q +Q+ +VP    T +   SQ NV           + G  +  PY     + +
Sbjct: 94  -----LNQ-VQVQHVPLGPPTLI---SQPNVSI---------ASGTSLHQPYVQTPDIGM 153

Query: 131 PVGVGNSEPLMSSVSQATNSVSQI----------EQANQHSSVSTVNLAANV--PVFNHP 190
           P G G    L S  S  +   S++           QA Q +S+   +  +++  P F  P
Sbjct: 154 P-GFGGPRALFSYPSATSYEGSRVPPQVTGPSIHSQAQQRASIIHTSAESSIMNPTFEQP 213

Query: 191 --------------SDWQGHASADGKRYYYNKKTKQSSWEKPLELMTPLERADASTVWKE 250
                         +DW  H SADG++Y++NK+TK+S+WEKP+ELMT  ERADA T WKE
Sbjct: 214 KAAFLKPLPSQKALTDWVEHTSADGRKYFFNKRTKKSTWEKPVELMTLFERADARTDWKE 273

Query: 251 FTSPDGRKYYYNKVTKESKWTMPEELKLAREQAQKESVQGTQTDMAVTTSQPTPTVGLFH 310
            +SPDGRKYYYNK+TK+S WTMPEE+K+ REQA+  SVQG   +  +  S+         
Sbjct: 274 HSSPDGRKYYYNKITKQSTWTMPEEMKIVREQAEIASVQGPHAEGIIDASEVLTRSDTAS 333

Query: 311 AETPAISTISSSISPTVSGVALS---PVPAALFVSGPPAVVHANASSMTAFESLASQDVK 370
              P      +S S  V  + L+     PA++  S  P V + +   M+A E+    D  
Sbjct: 334 TAAPTGLPSQTSTSEGVEKLTLTSDLKQPASVPGSSSP-VENVDRVQMSADETSQLCDTS 393

Query: 371 N------PVDETSTEDI------------------------------EEARKRMAVAGKV 430
                  PV ETS   +                              +E++K M  + KV
Sbjct: 394 ETDGLSVPVTETSAATLVEKDEISVGNSGDSDDMSTKNANQGSGSGPKESQKPMVESEKV 453

Query: 431 NETVLEEKYADDEPLVFANKLEAKSAFKALLESVNVQSDWTWEQAMREIINDKRYGALKT 490
            E+  EEK    E   F NKLEA   FK+LL+S  V SDWTWEQAMREIINDKRYGAL+T
Sbjct: 454 -ESQTEEKQIHQESFSFNNKLEAVDVFKSLLKSAKVGSDWTWEQAMREIINDKRYGALRT 513

Query: 491 LGERKQAFHEYLGHRKKLDAEERRIRQKKAREEFIKMLDESKELTSSTRWSKAVSMFEND 550
           LGERKQAF+E+L   K+   EER  RQKK  E+F +ML+E  ELT STRWSK V+MFE+D
Sbjct: 514 LGERKQAFNEFLLQTKRAAEEERLARQKKLYEDFKRMLEECVELTPSTRWSKTVTMFEDD 573

Query: 551 ERFKAVERSRDREDLFETCIVELERKEKERAAEEHKKNITEYREFLESCDYIK------- 610
           ERFKA+ER +DR ++FE  + EL+ K + +A E+ K+NI EY+ FLESC++IK       
Sbjct: 574 ERFKALEREKDRRNIFEDHVSELKEKGRVKALEDRKRNIIEYKRFLESCNFIKPNSQWRK 633

Query: 611 ------------------------DYMRELEKEEEEQKKIQKGRLRRIERKNRDEFRQLM 670
                                   +Y+R+LE+EEEE+KKIQK  L+++ERK+RDEF  L+
Sbjct: 634 VQDRLEVDERCSRLEKIDQLEIFQEYLRDLEREEEEKKKIQKEELKKVERKHRDEFHGLL 693

Query: 671 EEHITAGVLTAKTFWRDYCLKVKELPQYQAVASNISGSTPKDLFEDVLKELKTKYHKEKA 730
           +EHI  G LTAKT WRDY +KVK+LP Y A+ASN SG+TPKDLFED +++LK + H+ K+
Sbjct: 694 DEHIATGELTAKTIWRDYLMKVKDLPVYSAIASNSSGATPKDLFEDAVEDLKKRDHELKS 753

Query: 731 QIKDVMKAAKVTITSSWTFDDLKAVIEE--GAPLALSDIN----FKDLLERAKAKEQKEA 790
           QIKDV+K  KV +++  TFD+ K  I E  G PL + D+     F DLLERAK KE+KEA
Sbjct: 754 QIKDVLKLRKVNLSAGSTFDEFKVSISEDIGFPL-IPDVRLKLVFDDLLERAKEKEEKEA 813

Query: 791 KRRQRLADDFSRLLQLFKEISASSNWEDSKQLFEESEDYRSIGEETFAKEVFEEYVVHLQ 850
           +++ R  +    +L+ FK+I+ASS+WE+ K L E SE   +IG+E+F K  FE+YV  L+
Sbjct: 814 RKQTRQTEKLVDMLRSFKDITASSSWEELKHLVEGSEKCSTIGDESFRKRCFEDYVSLLK 873

Query: 851 EKAKEKERKGEEEKAKKEKECEEKEKERKEKEREREKEK-GRVKKDETDSENIDANKTRV 860
           E++   ++  +  +  +E+  + ++K  +EK+R RE++     KK      N D N+   
Sbjct: 874 EQSNRIKQNKKVPEDVREEHDKGRDKYGREKDRVRERDSDDHHKKGAAGKYNHDMNEPHG 933

BLAST of Cp4.1LG02g06390 vs. ExPASy Swiss-Prot
Match: O75400 (Pre-mRNA-processing factor 40 homolog A OS=Homo sapiens OX=9606 GN=PRPF40A PE=1 SV=2)

HSP 1 Score: 231.5 bits (589), Expect = 4.0e-59
Identity = 259/871 (29.74%), Postives = 407/871 (46.73%), Query Frame = 0

Query: 108 MHGLGSHGLPISSPYTPMSQMHVPVG---VGNSEPLMSSVSQATNSVSQIEQANQHSS-- 167
           MH +G        P+  M QM  P+G   +G    +MSSV      +S + QA+   +  
Sbjct: 68  MHPMGQRANMPPVPHGMMPQMMPPMGGPPMGQMPGMMSSVMPGM-MMSHMSQASMQPALP 127

Query: 168 --VSTVNLAANVPVFNHPSDWQGHASADGKRYYYNKKTKQSSWEKPLELMTPLERADAST 227
             V+++++AA        S W  H S DG+ YYYN +TKQS+WEKP +L TP E+  +  
Sbjct: 128 PGVNSMDVAAGT-ASGAKSMWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKC 187

Query: 228 VWKEFTSPDGRKYYYNKVTKESKWTMPEELK------------------------LAREQ 287
            WKE+ S  G+ YYYN  TKES+W  P+EL+                         A E 
Sbjct: 188 PWKEYKSDSGKPYYYNSQTKESRWAKPKELEDLEGYQNTIVAGSLITKSNLHAMIKAEES 247

Query: 288 AQKESVQGTQTDMAVTTSQPTPTVGLFHAETPAI----------------STISSSISPT 347
           +++E    T T    TT  PT    +  AE  A                 +  S+S S T
Sbjct: 248 SKQEECTTTSTAPVPTTEIPTTMSTMAAAEAAAAVVAAAAAAAAAAAAANANASTSASNT 307

Query: 348 VSGVALSPVPAALFVSGPPAVVHANASSMTAFESLASQDVKNPV-----DETSTEDIEEA 407
           VSG    PV     V+   A V  N +++T      +Q    P       E S+   EE 
Sbjct: 308 VSGTV--PVVPEPEVTSIVATVVDNENTVTISTEEQAQLTSTPAIQDQSVEVSSNTGEET 367

Query: 408 RKRMAVAGKVNETVLEEKYADDEPLVFANKLEAKSAFKALLESVNVQSDWTWEQAMREII 467
            K+  VA    +   EE     +   +  K EAK AFK LL+   V S+ +WEQAM+ II
Sbjct: 368 SKQETVADFTPKKEEEESQPAKKTYTWNTKEEAKQAFKELLKEKRVPSNASWEQAMKMII 427

Query: 468 NDKRYGALKTLGERKQAFHEYLGHRKKLDAEERRIRQKKAREEFIKMLDESKELTSSTRW 527
           ND RY AL  L E+KQAF+ Y    +K + EE R + K+A+E F + L+  +++TS+TR+
Sbjct: 428 NDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKESFQRFLENHEKMTSTTRY 487

Query: 528 SKAVSMFENDERFKAVERSRDREDLFETCIVELERKEKERAAEEHKK------------- 587
            KA  MF   E + A+   RDR +++E  +  L +KEKE+A +  K+             
Sbjct: 488 KKAEQMFGEMEVWNAIS-ERDRLEIYEDVLFFLSKKEKEQAKQLRKRNWEALKNILDNMA 547

Query: 588 NITEYREFLESCDYIKD------------------------YMRELEKEEEEQKKIQKGR 647
           N+T    + E+  Y+ D                        ++R LEKEEEE+K+    R
Sbjct: 548 NVTYSTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEKQKSLLR 607

Query: 648 LRRIERKNRDEFRQLMEEHITAGVLTAKTFWRDYCLKVKELPQYQAVASNI--------S 707
            RR +RKNR+ F+  ++E    G L + + W +          Y  ++S+I         
Sbjct: 608 ERRRQRKNRESFQIFLDELHEHGQLHSMSSWMEL---------YPTISSDIRFTNMLGQP 667

Query: 708 GSTPKDLFEDVLKELKTKYHKEKAQIKDVMKAAKVTITSSWTFDDLKAVIEEGAPLALSD 767
           GST  DLF+  +++LK +YH EK  IKD++K     +  + TF+D  A+I         D
Sbjct: 668 GSTALDLFKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNTTFEDFVAIISSTKRSTTLD 727

Query: 768 -----INFKDLLERAKA----KEQKEAKRRQRLADDF-SRLLQLFKEISASSNWEDSKQL 827
                + F  LLE+A+A    +E++EA++ +R    F S L Q    I   + WED ++ 
Sbjct: 728 AGNIKLAFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQAAPPIELDAVWEDIRER 787

Query: 828 FEESEDYRSIGEETFAKEVFEEYVVHLQEKAKEKERKGEEEKAKKEKECEEKEKERKEKE 862
           F +   +  I  E+  K +F++++  L+ + +    K ++   K +K   ++ + R   +
Sbjct: 788 FVKEPAFEDITLESERKRIFKDFMHVLEHECQHHHSKNKKHSKKSKKHHRKRSRSRSGSD 847

BLAST of Cp4.1LG02g06390 vs. ExPASy Swiss-Prot
Match: Q9R1C7 (Pre-mRNA-processing factor 40 homolog A OS=Mus musculus OX=10090 GN=Prpf40a PE=1 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 1.3e-57
Identity = 253/868 (29.15%), Postives = 403/868 (46.43%), Query Frame = 0

Query: 108 MHGLGSHGLPISSPYTPMSQMHVPVG---VGNSEPLMSSVSQATNSVSQIEQANQHSS-- 167
           MH +G        P+  M QM  P+G   +G    +MSSV      +S + QA+   +  
Sbjct: 68  MHPMGQRANMPPVPHGMMPQMMPPMGGPPMGQMPGMMSSVMSGM-MMSHMSQASMQPALP 127

Query: 168 --VSTVNLAANVPVFNHPSDWQGHASADGKRYYYNKKTKQSSWEKPLELMTPLERADAST 227
             V+++++AA        S W  H S DG+ YYYN +TKQS+WEKP +L TP E+  +  
Sbjct: 128 PGVNSMDVAAGA-ASGAKSMWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKC 187

Query: 228 VWKEFTSPDGRKYYYNKVTKESKWTMPEELK------------------------LAREQ 287
            WKE+ S  G+ YYYN  TKES+W  P+EL+                         A E 
Sbjct: 188 PWKEYKSDSGKPYYYNSQTKESRWAKPKELEDLEGYQNTIVAGGLITKSNLHAMIKAEES 247

Query: 288 AQKESVQGTQTDMAVTTSQPTPTVGLFHAETPAI-------------STISSSISPTVSG 347
           +++E      T    TT  PT    +  AE  A              +  S++ + TV  
Sbjct: 248 SKQEECTTASTAPVPTTEIPTTMSTMAAAEAAAAVVAAAAAAAAAANANTSTTPTNTVGS 307

Query: 348 VALSPVP-----AALFVSGPPAVVHANASSMTAFESLASQDVKNPVDETSTEDIEEARKR 407
           V ++P P      A  V     V  +         + A QD+   +   S+   EE  K+
Sbjct: 308 VPVAPEPEVTSIVATAVDNENTVTVSTEEQAQLANTTAIQDLSGDI---SSNTGEEPAKQ 367

Query: 408 MAVAGKVNETVLEEKYADDEPLVFANKLEAKSAFKALLESVNVQSDWTWEQAMREIINDK 467
             V+    +   EE     +   +  K EAK AFK LL+   V S+ +WEQAM+ IIND 
Sbjct: 368 ETVSDFTPKKEEEESQPAKKTYTWNTKEEAKQAFKELLKEKRVPSNASWEQAMKMIINDP 427

Query: 468 RYGALKTLGERKQAFHEYLGHRKKLDAEERRIRQKKAREEFIKMLDESKELTSSTRWSKA 527
           RY AL  L E+KQAF+ Y    +K + EE R + K+A+E F + L+  +++TS+TR+ KA
Sbjct: 428 RYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKESFQRFLENHEKMTSTTRYKKA 487

Query: 528 VSMFENDERFKAVERSRDREDLFETCIVELERKEKERAAEEHKK-------------NIT 587
             MF   E + A+   RDR +++E  +  L +KEKE+A +  K+             N+T
Sbjct: 488 EQMFGEMEVWNAIS-ERDRLEIYEDVLFFLSKKEKEQAKQLRKRNWEALKNILDNMANVT 547

Query: 588 EYREFLESCDYIKD------------------------YMRELEKEEEEQKKIQKGRLRR 647
               + E+  Y+ D                        ++R LEKEEEE+K+    R RR
Sbjct: 548 YSTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEKQKTLLRERR 607

Query: 648 IERKNRDEFRQLMEEHITAGVLTAKTFWRDYCLKVKELPQYQAVASNI--------SGST 707
            +RKNR+ F+  ++E    G L + + W +          Y  ++S+I         GST
Sbjct: 608 RQRKNRESFQIFLDELHEHGQLHSMSSWMEL---------YPTISSDIRFTNMLGQPGST 667

Query: 708 PKDLFEDVLKELKTKYHKEKAQIKDVMKAAKVTITSSWTFDDLKAVIEEGAPLALSD--- 767
             DLF+  +++LK +YH EK  IKD++K     +  + TF+D  A+I         D   
Sbjct: 668 ALDLFKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNTTFEDFVAIISSTKRSTTLDAGN 727

Query: 768 --INFKDLLERAKA----KEQKEAKRRQRLADDF-SRLLQLFKEISASSNWEDSKQLFEE 827
             + F  LLE+A+A    +E++EA++ +R    F S L Q    I   + WED ++ F +
Sbjct: 728 IKLAFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQATPPIELDAVWEDIRERFVK 787

Query: 828 SEDYRSIGEETFAKEVFEEYVVHLQEKAKEKERKGEEEKAKKEKECEEKEKERKEKERER 862
              +  I  E+  K +F++++  L+ + +    K ++   K +K   ++ + R   E + 
Sbjct: 788 EPAFEDITLESERKRIFKDFMHVLEHECQHHHSKNKKHSKKSKKHHRKRSRSRSGSESDD 847

BLAST of Cp4.1LG02g06390 vs. ExPASy Swiss-Prot
Match: Q6NWY9 (Pre-mRNA-processing factor 40 homolog B OS=Homo sapiens OX=9606 GN=PRPF40B PE=1 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 6.7e-38
Identity = 234/885 (26.44%), Postives = 382/885 (43.16%), Query Frame = 0

Query: 61  PQFVPRPSHRGYITPLSQGIQMPYVPTRSRTSVPPQSQQNVPAPNNQMHGLGSHGLPISS 120
           P F+P P           GI  P+ P      +PP SQ+  PA      G+    LP   
Sbjct: 4   PPFMPPP-----------GIPPPFPP----MGLPPMSQR-PPAIPPMPPGILPPMLPPMG 63

Query: 121 PYTPMSQMHVPVGVGNSEPLMSSVSQATNSVSQIEQANQHSSVSTVNLAANVPVFNHPSD 180
              P++Q+      G   P+M  +      V+        ++ S V  A   P     + 
Sbjct: 64  APPPLTQI-----PGMVPPMMPGMLMPAVPVTAATAPGADTASSAV--AGTGP---PRAL 123

Query: 181 WQGHASADGKRYYYNKKTKQSSWEKPLELMTPLERADASTVWKEFTSPDGRKYYYNKVTK 240
           W  H + DG+ YYYN   KQS WEKP  L +  E   +   WKE+ S  G+ YYYN  +K
Sbjct: 124 WSEHVAPDGRIYYYNADDKQSVWEKPSVLKSKAELLLSQCPWKEYKSDTGKPYYYNNQSK 183

Query: 241 ESKWTMPEELKLAREQAQKESVQGTQTDMAVTTSQPTPTVGLFHAETPAISTISSSISPT 300
           ES+WT P++L    E   K+   G Q      T QP P         P        + P 
Sbjct: 184 ESRWTRPKDLD-DLEVLVKQEAAGKQQQQLPQTLQPQP---------PQPQPDPPPVPP- 243

Query: 301 VSGVALSPVPAALFVSGPPAVVHANASSMTAFESLASQDVKNPVDETSTEDIEEARKRMA 360
                 +PVP  L    P      +    T            P+++   + +EE      
Sbjct: 244 ----GPTPVPTGLLEPEPGGSEDCDVLEAT-----------QPLEQGFLQQLEEGPS--- 303

Query: 361 VAGKVNETVLEEKYADDEP----LVFANKLEAKSAFKALLESVNVQSDWTWEQAMREIIN 420
            +   ++   EE+ +  EP    L ++N+ +AK AFK LL    V S+ +WEQAM+ ++ 
Sbjct: 304 -SSGQHQPQQEEEESKPEPERSGLSWSNREKAKQAFKELLRDKAVPSNASWEQAMKMVVT 363

Query: 421 DKRYGALKTLGERKQAFHEYLGHRKKLDAEERRIRQKKAREEFIKMLDESKELTSSTRWS 480
           D RY AL  L E+KQAF+ Y   R+K + EE R+R K+A++     L++ + +TS+TR+ 
Sbjct: 364 DPRYSALPKLSEKKQAFNAYKAQREKEEKEEARLRAKEAKQTLQHFLEQHERMTSTTRYR 423

Query: 481 KAVSMFENDERFKAVERSRDREDLFETCIVELERKEKERAAEEHKKNITEYREFLESCDY 540
           +A   F   E + AV   RDR+++++  +  L +KEKE+A +  ++NI   +  L+    
Sbjct: 424 RAEQTFGELEVW-AVVPERDRKEVYDDVLFFLAKKEKEQAKQLRRRNIQALKSILDGMSS 483

Query: 541 I-------------------------------------KDYMRELEKEEEEQKKIQKGRL 600
           +                                     ++++R LE+EEEE+++  + R 
Sbjct: 484 VNFQTTWSQAQQYLMDNPSFAQDHQLQNMDKEDALICFEEHIRALEREEEEERERARLRE 543

Query: 601 RRIERKNRDEFRQLMEEHITAGVLTAKTFWRDYCLKVKELPQYQAVASNI--------SG 660
           RR +RKNR+ F+  ++E    G L + + W +          Y AV++++         G
Sbjct: 544 RRQQRKNREAFQTFLDELHETGQLHSMSTWMEL---------YPAVSTDVRFANMLGQPG 603

Query: 661 STPKDLFEDVLKELKTKYHKEKAQIKDVMKAAKVTITSSWTFDDLKAVIEEGAPLALSD- 720
           STP DLF+  ++ELK ++H EK  IKD++K     +  +  F+D   VI      A  D 
Sbjct: 604 STPLDLFKFYVEELKARFHDEKKIIKDILKDRGFCVEVNTAFEDFAHVISFDKRAAALDA 663

Query: 721 ----INFKDLLERAKA----KEQKEAKR-RQRLADDFSRLLQLFKEISASSNWEDSKQLF 780
               + F  LLE+A+A    +E++EA+R R+R A   S L Q    +   + WE+ ++ F
Sbjct: 664 GNIKLTFNSLLEKAEAREREREKEEARRMRRREAAFRSMLRQAVPALELGTAWEEVRERF 723

Query: 781 EESEDYRSIGEETFAKEVFEEYV--------VHLQEKAKEKERKGEEEKAKKEKECEEKE 840
                +  I  E+    +F E++         HL  K ++  RKG++   K+       E
Sbjct: 724 VCDSAFEQITLESERIRLFREFLQVLEQTECQHLHTKGRKHGRKGKKHHHKRSHSPSGSE 783

Query: 841 KERKE----------KEREREKEKGRVKKDETDS-----------ENIDANKTRVYREKK 858
            E +E          + R    E G       DS            +  ++        +
Sbjct: 784 SEEEELPPPSLRPPKRRRRNPSESGSEPSSSLDSVESGGAALGGRGSPSSHLLGADHGLR 822

BLAST of Cp4.1LG02g06390 vs. NCBI nr
Match: XP_023524058.1 (pre-mRNA-processing protein 40A-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1566 bits (4054), Expect = 0.0
Identity = 857/888 (96.51%), Postives = 857/888 (96.51%), Query Frame = 0

Query: 1   MDNLSQASGGQFRPNIPAQPGQTFISSSAPQFQSAGQNISSSNVGIPAGQVQPHQYPQSV 60
           MDNLSQASGGQFRPNIPAQPGQTFISSSAPQFQSAGQNISSSNVGIPAGQVQPHQYPQSV
Sbjct: 1   MDNLSQASGGQFRPNIPAQPGQTFISSSAPQFQSAGQNISSSNVGIPAGQVQPHQYPQSV 60

Query: 61  PQFVPRPSHRGYITPLSQGIQMPYVPTRSRTSVPPQSQQNVPAPNNQMHGLGSHGLPISS 120
           PQFVPRPSHRGYITPLSQGIQMPYVPTRSRTSVPPQSQQNVPAPNNQMHGLGSHGLPISS
Sbjct: 61  PQFVPRPSHRGYITPLSQGIQMPYVPTRSRTSVPPQSQQNVPAPNNQMHGLGSHGLPISS 120

Query: 121 PYTPMSQMHVPVGVGNSEPLMSSVSQATNSVSQIEQANQHSSVSTVNLAANVPVFNHPSD 180
           PYTPMSQMHVPVGVGNSEPLMSSVSQATNSVSQIEQANQHSSVSTVNLAANVPVFNHPSD
Sbjct: 121 PYTPMSQMHVPVGVGNSEPLMSSVSQATNSVSQIEQANQHSSVSTVNLAANVPVFNHPSD 180

Query: 181 WQGHASADGKRYYYNKKTKQSSWEKPLELMTPLERADASTVWKEFTSPDGRKYYYNKVTK 240
           WQGHASADGKRYYYNKKTKQSSWEKPLELMTPLERADASTVWKEFTSPDGRKYYYNKVTK
Sbjct: 181 WQGHASADGKRYYYNKKTKQSSWEKPLELMTPLERADASTVWKEFTSPDGRKYYYNKVTK 240

Query: 241 ESKWTMPEELKLAREQAQKESVQGTQTDMAVTTSQPTPTVGLFHAETPAISTISSSISPT 300
           ESKWTMPEELKLAREQAQKESVQGTQTDMAVTTSQPTPTVGLFHAETPAISTISSSISPT
Sbjct: 241 ESKWTMPEELKLAREQAQKESVQGTQTDMAVTTSQPTPTVGLFHAETPAISTISSSISPT 300

Query: 301 VSGVALSPVPAALFVSGPPAVVHANASSMTAFESLASQDVKNPVDETSTEDIEEARKRMA 360
           VSGVALSPVPAALFVSGPPAVVHANASSMTAFESLASQDVKNPVDETSTEDIEEARKRMA
Sbjct: 301 VSGVALSPVPAALFVSGPPAVVHANASSMTAFESLASQDVKNPVDETSTEDIEEARKRMA 360

Query: 361 VAGKVNETVLEEKYADDEPLVFANKLEAKSAFKALLESVNVQSDWTWEQAMREIINDKRY 420
           VAGKVNETVLEEKYADDEPLVFANKLEAKSAFKALLESVNVQSDWTWEQAMREIINDKRY
Sbjct: 361 VAGKVNETVLEEKYADDEPLVFANKLEAKSAFKALLESVNVQSDWTWEQAMREIINDKRY 420

Query: 421 GALKTLGERKQAFHEYLGHRKKLDAEERRIRQKKAREEFIKMLDESKELTSSTRWSKAVS 480
           GALKTLGERKQAFHEYLGHRKKLDAEERRIRQKKAREEFIKMLDESKELTSSTRWSKAVS
Sbjct: 421 GALKTLGERKQAFHEYLGHRKKLDAEERRIRQKKAREEFIKMLDESKELTSSTRWSKAVS 480

Query: 481 MFENDERFKAVERSRDREDLFETCIVELERKEKERAAEEHKKNITEYREFLESCDYIK-- 540
           MFENDERFKAVERSRDREDLFETCIVELERKEKERAAEEHKKNITEYREFLESCDYIK  
Sbjct: 481 MFENDERFKAVERSRDREDLFETCIVELERKEKERAAEEHKKNITEYREFLESCDYIKVS 540

Query: 541 -----------------------------DYMRELEKEEEEQKKIQKGRLRRIERKNRDE 600
                                        DYMRELEKEEEEQKKIQKGRLRRIERKNRDE
Sbjct: 541 SKWRKVQDRLEVDERCLYLEKLDRLLIFQDYMRELEKEEEEQKKIQKGRLRRIERKNRDE 600

Query: 601 FRQLMEEHITAGVLTAKTFWRDYCLKVKELPQYQAVASNISGSTPKDLFEDVLKELKTKY 660
           FRQLMEEHITAGVLTAKTFWRDYCLKVKELPQYQAVASNISGSTPKDLFEDVLKELKTKY
Sbjct: 601 FRQLMEEHITAGVLTAKTFWRDYCLKVKELPQYQAVASNISGSTPKDLFEDVLKELKTKY 660

Query: 661 HKEKAQIKDVMKAAKVTITSSWTFDDLKAVIEEGAPLALSDINFKDLLERAKAKEQKEAK 720
           HKEKAQIKDVMKAAKVTITSSWTFDDLKAVIEEGAPLALSDINFKDLLERAKAKEQKEAK
Sbjct: 661 HKEKAQIKDVMKAAKVTITSSWTFDDLKAVIEEGAPLALSDINFKDLLERAKAKEQKEAK 720

Query: 721 RRQRLADDFSRLLQLFKEISASSNWEDSKQLFEESEDYRSIGEETFAKEVFEEYVVHLQE 780
           RRQRLADDFSRLLQLFKEISASSNWEDSKQLFEESEDYRSIGEETFAKEVFEEYVVHLQE
Sbjct: 721 RRQRLADDFSRLLQLFKEISASSNWEDSKQLFEESEDYRSIGEETFAKEVFEEYVVHLQE 780

Query: 781 KAKEKERKGEEEKAKKEKECEEKEKERKEKEREREKEKGRVKKDETDSENIDANKTRVYR 840
           KAKEKERKGEEEKAKKEKECEEKEKERKEKEREREKEKGRVKKDETDSENIDANKTRVYR
Sbjct: 781 KAKEKERKGEEEKAKKEKECEEKEKERKEKEREREKEKGRVKKDETDSENIDANKTRVYR 840

Query: 841 EKKREKNKDRKRRKRHHSATDDGGSNKDEREESKKSCKRGSDRKKSRK 857
           EKKREKNKDRKRRKRHHSATDDGGSNKDEREESKKSCKRGSDRKKSRK
Sbjct: 841 EKKREKNKDRKRRKRHHSATDDGGSNKDEREESKKSCKRGSDRKKSRK 888

BLAST of Cp4.1LG02g06390 vs. NCBI nr
Match: XP_023524057.1 (pre-mRNA-processing protein 40A-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1560 bits (4039), Expect = 0.0
Identity = 857/892 (96.08%), Postives = 857/892 (96.08%), Query Frame = 0

Query: 1   MDNLSQASGGQFRPNIPAQPGQTFISSSAPQFQSAGQNISSSNVGIPAGQVQPHQYPQSV 60
           MDNLSQASGGQFRPNIPAQPGQTFISSSAPQFQSAGQNISSSNVGIPAGQVQPHQYPQSV
Sbjct: 1   MDNLSQASGGQFRPNIPAQPGQTFISSSAPQFQSAGQNISSSNVGIPAGQVQPHQYPQSV 60

Query: 61  PQFVPRPSHRGYITPLSQGIQMPYVPTRSRTSVPPQSQQNVPAPNNQMHGLGSHGLPISS 120
           PQFVPRPSHRGYITPLSQGIQMPYVPTRSRTSVPPQSQQNVPAPNNQMHGLGSHGLPISS
Sbjct: 61  PQFVPRPSHRGYITPLSQGIQMPYVPTRSRTSVPPQSQQNVPAPNNQMHGLGSHGLPISS 120

Query: 121 PYTPMSQMHVPVGVGNSEPLMSSVSQATNSVSQIEQANQHSSVSTVNLAANVPVFNHPSD 180
           PYTPMSQMHVPVGVGNSEPLMSSVSQATNSVSQIEQANQHSSVSTVNLAANVPVFNHPSD
Sbjct: 121 PYTPMSQMHVPVGVGNSEPLMSSVSQATNSVSQIEQANQHSSVSTVNLAANVPVFNHPSD 180

Query: 181 WQGHASADGKRYYYNKKTKQSSWEKPLELMTPLERADASTVWKEFTSPDGRKYYYNKVTK 240
           WQGHASADGKRYYYNKKTKQSSWEKPLELMTPLERADASTVWKEFTSPDGRKYYYNKVTK
Sbjct: 181 WQGHASADGKRYYYNKKTKQSSWEKPLELMTPLERADASTVWKEFTSPDGRKYYYNKVTK 240

Query: 241 ESKWTMPEELKLAREQAQKESVQGTQTDMAVTTSQPTPTVGLFHAETPAISTISSSISPT 300
           ESKWTMPEELKLAREQAQKESVQGTQTDMAVTTSQPTPTVGLFHAETPAISTISSSISPT
Sbjct: 241 ESKWTMPEELKLAREQAQKESVQGTQTDMAVTTSQPTPTVGLFHAETPAISTISSSISPT 300

Query: 301 VSGVALSPVPAALFVSGPPAVVHANASSMTAFESLASQDVKNPVDETSTEDIEEARKRMA 360
           VSGVALSPVPAALFVSGPPAVVHANASSMTAFESLASQDVKNPVDETSTEDIEEARKRMA
Sbjct: 301 VSGVALSPVPAALFVSGPPAVVHANASSMTAFESLASQDVKNPVDETSTEDIEEARKRMA 360

Query: 361 VAGKVNETVLEEKYADDEPLVFANKLEAKSAFKALLESVNVQSDWTWEQAMREIINDKRY 420
           VAGKVNETVLEEKYADDEPLVFANKLEAKSAFKALLESVNVQSDWTWEQAMREIINDKRY
Sbjct: 361 VAGKVNETVLEEKYADDEPLVFANKLEAKSAFKALLESVNVQSDWTWEQAMREIINDKRY 420

Query: 421 GALKTLGERKQAFHEYLGHRKKLDAEERRIRQKKAREEFIKMLDESKELTSSTRWSKAVS 480
           GALKTLGERKQAFHEYLGHRKKLDAEERRIRQKKAREEFIKMLDESKELTSSTRWSKAVS
Sbjct: 421 GALKTLGERKQAFHEYLGHRKKLDAEERRIRQKKAREEFIKMLDESKELTSSTRWSKAVS 480

Query: 481 MFENDERFKAVERSRDREDLFETCIVELERKEKERAAEEHKKNITEYREFLESCDYIK-- 540
           MFENDERFKAVERSRDREDLFETCIVELERKEKERAAEEHKKNITEYREFLESCDYIK  
Sbjct: 481 MFENDERFKAVERSRDREDLFETCIVELERKEKERAAEEHKKNITEYREFLESCDYIKVS 540

Query: 541 -----------------------------DYMRELEKEEEEQKKIQKGRLRRIERKNRDE 600
                                        DYMRELEKEEEEQKKIQKGRLRRIERKNRDE
Sbjct: 541 SKWRKVQDRLEVDERCLYLEKLDRLLIFQDYMRELEKEEEEQKKIQKGRLRRIERKNRDE 600

Query: 601 FRQLMEEHITAGVLTAKTFWRDYCLKVKELPQYQAVASNISGSTPKDLFEDVLKELKTKY 660
           FRQLMEEHITAGVLTAKTFWRDYCLKVKELPQYQAVASNISGSTPKDLFEDVLKELKTKY
Sbjct: 601 FRQLMEEHITAGVLTAKTFWRDYCLKVKELPQYQAVASNISGSTPKDLFEDVLKELKTKY 660

Query: 661 HKEKAQIKDVMKAAKVTITSSWTFDDLKAVIEEGAPLALSDINFK----DLLERAKAKEQ 720
           HKEKAQIKDVMKAAKVTITSSWTFDDLKAVIEEGAPLALSDINFK    DLLERAKAKEQ
Sbjct: 661 HKEKAQIKDVMKAAKVTITSSWTFDDLKAVIEEGAPLALSDINFKLVYQDLLERAKAKEQ 720

Query: 721 KEAKRRQRLADDFSRLLQLFKEISASSNWEDSKQLFEESEDYRSIGEETFAKEVFEEYVV 780
           KEAKRRQRLADDFSRLLQLFKEISASSNWEDSKQLFEESEDYRSIGEETFAKEVFEEYVV
Sbjct: 721 KEAKRRQRLADDFSRLLQLFKEISASSNWEDSKQLFEESEDYRSIGEETFAKEVFEEYVV 780

Query: 781 HLQEKAKEKERKGEEEKAKKEKECEEKEKERKEKEREREKEKGRVKKDETDSENIDANKT 840
           HLQEKAKEKERKGEEEKAKKEKECEEKEKERKEKEREREKEKGRVKKDETDSENIDANKT
Sbjct: 781 HLQEKAKEKERKGEEEKAKKEKECEEKEKERKEKEREREKEKGRVKKDETDSENIDANKT 840

Query: 841 RVYREKKREKNKDRKRRKRHHSATDDGGSNKDEREESKKSCKRGSDRKKSRK 857
           RVYREKKREKNKDRKRRKRHHSATDDGGSNKDEREESKKSCKRGSDRKKSRK
Sbjct: 841 RVYREKKREKNKDRKRRKRHHSATDDGGSNKDEREESKKSCKRGSDRKKSRK 892

BLAST of Cp4.1LG02g06390 vs. NCBI nr
Match: XP_022941011.1 (pre-mRNA-processing protein 40A-like [Cucurbita moschata])

HSP 1 Score: 1519 bits (3934), Expect = 0.0
Identity = 840/892 (94.17%), Postives = 845/892 (94.73%), Query Frame = 0

Query: 1   MDNLSQASGGQFRPNIPAQPGQTFISSSAPQFQSAGQNISSSNVGIPAGQVQPHQYPQSV 60
           MDNLSQ+SGGQFRPNIPAQPGQTFISSSAPQFQSAGQNISSSNVGIPAGQVQPHQYPQSV
Sbjct: 1   MDNLSQSSGGQFRPNIPAQPGQTFISSSAPQFQSAGQNISSSNVGIPAGQVQPHQYPQSV 60

Query: 61  PQFVPRPSHRGYITPLSQGIQMPYVPTRSRTSVPPQSQQNVPAPNNQMHGLGSHGLPISS 120
           PQFVPRPSHRGYITPLSQGIQMPYVPTRS TSVPPQSQQNV APNNQMHGLGSHGL ISS
Sbjct: 61  PQFVPRPSHRGYITPLSQGIQMPYVPTRSLTSVPPQSQQNVSAPNNQMHGLGSHGLFISS 120

Query: 121 PYTPMSQMHVPVGVGNSEPLMSSVSQATNSVSQIEQANQHSSVSTVNLAANVPVFNHPSD 180
           PYTPMSQMHVPVGVGNSEPLMSSVSQATN VSQIEQANQHSSVSTV LAANVPVFNHPSD
Sbjct: 121 PYTPMSQMHVPVGVGNSEPLMSSVSQATNPVSQIEQANQHSSVSTVKLAANVPVFNHPSD 180

Query: 181 WQGHASADGKRYYYNKKTKQSSWEKPLELMTPLERADASTVWKEFTSPDGRKYYYNKVTK 240
           WQ HASADGKRYYYNKKTKQSSWEKPLELMTPLERADASTVWKEFTSP GRKYYYNKVTK
Sbjct: 181 WQEHASADGKRYYYNKKTKQSSWEKPLELMTPLERADASTVWKEFTSPYGRKYYYNKVTK 240

Query: 241 ESKWTMPEELKLAREQAQKESVQGTQTDMAVTTSQPTPTVGLFHAETPAISTISSSISPT 300
           ESKWTMPEELKLAREQAQKESVQGTQTDMAVTTSQPTPTVGLFHAETPAISTISSSISPT
Sbjct: 241 ESKWTMPEELKLAREQAQKESVQGTQTDMAVTTSQPTPTVGLFHAETPAISTISSSISPT 300

Query: 301 VSGVALSPVPAALFVSGPPAVVHANASSMTAFESLASQDVKNPVDETSTEDIEEARKRMA 360
           VSGVALSPVPAALFVSGPPAVVH NASSMTAFESLASQDVKNPVD TSTEDIEEARKRMA
Sbjct: 301 VSGVALSPVPAALFVSGPPAVVHVNASSMTAFESLASQDVKNPVDGTSTEDIEEARKRMA 360

Query: 361 VAGKVNETVLEEKYADDEPLVFANKLEAKSAFKALLESVNVQSDWTWEQAMREIINDKRY 420
           VAGKVNETVLEEKYADDEPLVFANKLEAKSAFKALLESVNVQSDWTWEQAMREIINDKRY
Sbjct: 361 VAGKVNETVLEEKYADDEPLVFANKLEAKSAFKALLESVNVQSDWTWEQAMREIINDKRY 420

Query: 421 GALKTLGERKQAFHEYLGHRKKLDAEERRIRQKKAREEFIKMLDESKELTSSTRWSKAVS 480
            ALKTLGERKQAFHEYLGHRKKLDAEERRIRQKKAREEFIKMLDESKELTSSTRWSKAVS
Sbjct: 421 RALKTLGERKQAFHEYLGHRKKLDAEERRIRQKKAREEFIKMLDESKELTSSTRWSKAVS 480

Query: 481 MFENDERFKAVERSRDREDLFETCIVELERKEKERAAEEHKKNITEYREFLESCDYIK-- 540
           MFENDERFKAVERSR REDLFETCIVELE+KEKERAAEEHKKNITEYREFLESCDYIK  
Sbjct: 481 MFENDERFKAVERSRYREDLFETCIVELEKKEKERAAEEHKKNITEYREFLESCDYIKVS 540

Query: 541 -----------------------------DYMRELEKEEEEQKKIQKGRLRRIERKNRDE 600
                                        DY+RELEKEEEEQKKIQKGRLRRIERKNRDE
Sbjct: 541 SKWRKVQDRLEVDDRCLYLEKLDRLLIFQDYIRELEKEEEEQKKIQKGRLRRIERKNRDE 600

Query: 601 FRQLMEEHITAGVLTAKTFWRDYCLKVKELPQYQAVASNISGSTPKDLFEDVLKELKTKY 660
           FRQLMEEHITAGVLTAKTFWRDYCLKVKELPQYQAVASNISGSTPKDLFEDVLKELKTKY
Sbjct: 601 FRQLMEEHITAGVLTAKTFWRDYCLKVKELPQYQAVASNISGSTPKDLFEDVLKELKTKY 660

Query: 661 HKEKAQIKDVMKAAKVTITSSWTFDDLKAVIEEGAPLALSDINFK----DLLERAKAKEQ 720
           HKEKAQIKDVMKAAKVTITSSWTFDDLKAVIEEGAPLALSDINFK    DLLERAKAKE+
Sbjct: 661 HKEKAQIKDVMKAAKVTITSSWTFDDLKAVIEEGAPLALSDINFKLVYEDLLERAKAKEE 720

Query: 721 KEAKRRQRLADDFSRLLQLFKEISASSNWEDSKQLFEESEDYRSIGEETFAKEVFEEYVV 780
           KEAKRRQRLADDFSRLLQLFKEISASSNWEDSKQLFEESEDYR IGEETFAKEVFEEYVV
Sbjct: 721 KEAKRRQRLADDFSRLLQLFKEISASSNWEDSKQLFEESEDYRLIGEETFAKEVFEEYVV 780

Query: 781 HLQEKAKEKERKGEEEKAKKEKECEEKEKERKEKEREREKEKGRVKKDETDSENIDANKT 840
           HLQEKAKEKERKGEEEKAKKEKECEEKEKERKEKEREREKEKGRVKKDETDSENIDAN+T
Sbjct: 781 HLQEKAKEKERKGEEEKAKKEKECEEKEKERKEKEREREKEKGRVKKDETDSENIDANET 840

Query: 841 RVYREKKREKNKDRKRRKRHHSATDDGGSNKDEREESKKSCKRGSDRKKSRK 857
           RVYREKKREKNKDRKRRKRHHSATDDGGSNKDEREESKKSCKRGSDRKKSRK
Sbjct: 841 RVYREKKREKNKDRKRRKRHHSATDDGGSNKDEREESKKSCKRGSDRKKSRK 892

BLAST of Cp4.1LG02g06390 vs. NCBI nr
Match: KAG6608409.1 (Pre-mRNA-processing protein 40A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1513 bits (3916), Expect = 0.0
Identity = 837/892 (93.83%), Postives = 842/892 (94.39%), Query Frame = 0

Query: 1   MDNLSQASGGQFRPNIPAQPGQTFISSSAPQFQSAGQNISSSNVGIPAGQVQPHQYPQSV 60
           MDNLSQ+SGGQFRPNIPAQPGQTFISSSAPQFQSAGQNISSSNVGIPAGQVQPHQYPQSV
Sbjct: 1   MDNLSQSSGGQFRPNIPAQPGQTFISSSAPQFQSAGQNISSSNVGIPAGQVQPHQYPQSV 60

Query: 61  PQFVPRPSHRGYITPLSQGIQMPYVPTRSRTSVPPQSQQNVPAPNNQMHGLGSHGLPISS 120
           PQFVPRPSHRGYITPLSQGIQMPYVPTRS TSVPPQSQQNV APNNQMHGLGSHGL ISS
Sbjct: 61  PQFVPRPSHRGYITPLSQGIQMPYVPTRSLTSVPPQSQQNVSAPNNQMHGLGSHGLFISS 120

Query: 121 PYTPMSQMHVPVGVGNSEPLMSSVSQATNSVSQIEQANQHSSVSTVNLAANVPVFNHPSD 180
           PYTPMSQMHVPVG GNSE LMSSVSQATN VSQIEQANQHSSVSTVNLAANVPVFNHPSD
Sbjct: 121 PYTPMSQMHVPVGFGNSEHLMSSVSQATNPVSQIEQANQHSSVSTVNLAANVPVFNHPSD 180

Query: 181 WQGHASADGKRYYYNKKTKQSSWEKPLELMTPLERADASTVWKEFTSPDGRKYYYNKVTK 240
           WQ HASADGKRYYYNKKTKQSSWEKPLELMTPLERADASTVWKEFTSP GRKYYYNKVTK
Sbjct: 181 WQEHASADGKRYYYNKKTKQSSWEKPLELMTPLERADASTVWKEFTSPYGRKYYYNKVTK 240

Query: 241 ESKWTMPEELKLAREQAQKESVQGTQTDMAVTTSQPTPTVGLFHAETPAISTISSSISPT 300
           ESKWTMPEELKLAREQAQKESVQGTQTDMAVTTSQPTPTVGLFHAETPAISTISSSISPT
Sbjct: 241 ESKWTMPEELKLAREQAQKESVQGTQTDMAVTTSQPTPTVGLFHAETPAISTISSSISPT 300

Query: 301 VSGVALSPVPAALFVSGPPAVVHANASSMTAFESLASQDVKNPVDETSTEDIEEARKRMA 360
           VSGVALSPVPAALFVSGPPAVVHANASSMTAFESLASQDVKNPVD TSTEDIEEARKRMA
Sbjct: 301 VSGVALSPVPAALFVSGPPAVVHANASSMTAFESLASQDVKNPVDGTSTEDIEEARKRMA 360

Query: 361 VAGKVNETVLEEKYADDEPLVFANKLEAKSAFKALLESVNVQSDWTWEQAMREIINDKRY 420
           V GKVNETVLEEKYADDEPLVFANKLEAKSAFKALLESVNVQSDWTWEQAMREIINDKRY
Sbjct: 361 VGGKVNETVLEEKYADDEPLVFANKLEAKSAFKALLESVNVQSDWTWEQAMREIINDKRY 420

Query: 421 GALKTLGERKQAFHEYLGHRKKLDAEERRIRQKKAREEFIKMLDESKELTSSTRWSKAVS 480
            ALKTLGERKQAFHEYLGHRKKLDAEERRIRQKKAREEFIKMLDESKELTSSTRWSKAVS
Sbjct: 421 RALKTLGERKQAFHEYLGHRKKLDAEERRIRQKKAREEFIKMLDESKELTSSTRWSKAVS 480

Query: 481 MFENDERFKAVERSRDREDLFETCIVELERKEKERAAEEHKKNITEYREFLESCDYIK-- 540
           MFENDERFKAVERSR REDLFETCIVELERKEKERAAEEHKKNITEYREFLESCDYIK  
Sbjct: 481 MFENDERFKAVERSRYREDLFETCIVELERKEKERAAEEHKKNITEYREFLESCDYIKVS 540

Query: 541 -----------------------------DYMRELEKEEEEQKKIQKGRLRRIERKNRDE 600
                                        DY+RELEKEEEEQKKIQKGRLRRIERKNRDE
Sbjct: 541 SKWRKVQDRLEGDERCLYLEKLDRLLIFQDYIRELEKEEEEQKKIQKGRLRRIERKNRDE 600

Query: 601 FRQLMEEHITAGVLTAKTFWRDYCLKVKELPQYQAVASNISGSTPKDLFEDVLKELKTKY 660
           FRQLMEEHITAGVLTAKTFWRDYCLKVKELPQYQAVASNISGSTPKDLFEDVLKELKTKY
Sbjct: 601 FRQLMEEHITAGVLTAKTFWRDYCLKVKELPQYQAVASNISGSTPKDLFEDVLKELKTKY 660

Query: 661 HKEKAQIKDVMKAAKVTITSSWTFDDLKAVIEEGAPLALSDINFK----DLLERAKAKEQ 720
           HKEKAQIKDVMKAAKVTITSSWTFDDLKAVIEEGAPLALSDINFK    DLLERAKAKE+
Sbjct: 661 HKEKAQIKDVMKAAKVTITSSWTFDDLKAVIEEGAPLALSDINFKLVYEDLLERAKAKEE 720

Query: 721 KEAKRRQRLADDFSRLLQLFKEISASSNWEDSKQLFEESEDYRSIGEETFAKEVFEEYVV 780
           KEAKRRQRLADDFSRLL LFKEISASSNWEDSKQLFEESEDYRSIGEETFAKEVFEEYVV
Sbjct: 721 KEAKRRQRLADDFSRLLHLFKEISASSNWEDSKQLFEESEDYRSIGEETFAKEVFEEYVV 780

Query: 781 HLQEKAKEKERKGEEEKAKKEKECEEKEKERKEKEREREKEKGRVKKDETDSENIDANKT 840
           HLQEKAKEKERKGEEEKAKKEKECEEKEKERKEKEREREKEKGRVKKDET SEN+DAN+T
Sbjct: 781 HLQEKAKEKERKGEEEKAKKEKECEEKEKERKEKEREREKEKGRVKKDETVSENVDANET 840

Query: 841 RVYREKKREKNKDRKRRKRHHSATDDGGSNKDEREESKKSCKRGSDRKKSRK 857
           RVYREKKREKNKDRKRRKRHHS TDDGGSNKDEREESKKSCKRGSDRKKSRK
Sbjct: 841 RVYREKKREKNKDRKRRKRHHSTTDDGGSNKDEREESKKSCKRGSDRKKSRK 892

BLAST of Cp4.1LG02g06390 vs. NCBI nr
Match: KAG7037749.1 (Pre-mRNA-processing protein 40A [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1507 bits (3901), Expect = 0.0
Identity = 836/896 (93.30%), Postives = 842/896 (93.97%), Query Frame = 0

Query: 1   MDNLSQASGGQFRPNIPAQPGQTFISSSAPQFQSAGQNISSSNVGIPAGQVQPHQYPQSV 60
           MDNLSQ+SGGQFRPNIPAQPGQTFISSSAPQFQSAGQNISSSNVGIPAGQVQPHQYPQSV
Sbjct: 1   MDNLSQSSGGQFRPNIPAQPGQTFISSSAPQFQSAGQNISSSNVGIPAGQVQPHQYPQSV 60

Query: 61  PQFVPRPSHRGYITPLSQGIQMPYVPTRSRTSVPPQSQQNVPAPNNQMHGLGSHGLPISS 120
           PQFVPRPSHRGYI PLSQGIQMPYVPTRS TSVPPQSQQNV APNNQMHGLGSHGL ISS
Sbjct: 61  PQFVPRPSHRGYINPLSQGIQMPYVPTRSLTSVPPQSQQNVSAPNNQMHGLGSHGLFISS 120

Query: 121 PYTPMSQMHVPVGVGNSEPLMSSVSQATNSVSQIEQANQHSSVSTVNLAANVPVFNHPSD 180
           PYTPMSQMHVPVG GNSEPLMSSVSQATN VSQIEQANQHSSVSTVNLAANVPVFNHPSD
Sbjct: 121 PYTPMSQMHVPVGFGNSEPLMSSVSQATNPVSQIEQANQHSSVSTVNLAANVPVFNHPSD 180

Query: 181 WQGHASADGKRYYYNKKTKQSSWEKPLELMTPLE----------------------RADA 240
           WQ HASADGKRYYYNKKTKQSSWEKPLELMTPLE                      RA+A
Sbjct: 181 WQEHASADGKRYYYNKKTKQSSWEKPLELMTPLEVNFWGWDVYIVAPWKSILWGWDRAEA 240

Query: 241 STVWKEFTSPDGRKYYYNKVTKESKWTMPEELKLAREQAQKESVQGTQTDMAVTTSQPTP 300
           STVWKEFTSP GRKYYYNKVTKESKWTMPEELKLAREQAQKESVQGTQTDMAVTTSQPTP
Sbjct: 241 STVWKEFTSPYGRKYYYNKVTKESKWTMPEELKLAREQAQKESVQGTQTDMAVTTSQPTP 300

Query: 301 TVGLFHAETPAISTISSSISPTVSGVALSPVPAALFVSGPPAVVHANASSMTAFESLASQ 360
           TVGLFHAETPAISTISSSISPTVSGVALSPVPAALFVSGPPAVVHANASSMTAFESLASQ
Sbjct: 301 TVGLFHAETPAISTISSSISPTVSGVALSPVPAALFVSGPPAVVHANASSMTAFESLASQ 360

Query: 361 DVKNPVDETSTEDIEEARKRMAVAGKVNETVLEEKYADDEPLVFANKLEAKSAFKALLES 420
           DVKNPVD TSTEDIEEARKRMAV GKVNETVLEEKYADDEPLVFANKLEAKSAFKALLES
Sbjct: 361 DVKNPVDGTSTEDIEEARKRMAVGGKVNETVLEEKYADDEPLVFANKLEAKSAFKALLES 420

Query: 421 VNVQSDWTWEQAMREIINDKRYGALKTLGERKQAFHEYLGHRKKLDAEERRIRQKKAREE 480
           VNVQSDWTWEQAMREIINDKRY ALKTLGERKQAFHEYLGHRKKLDAEERRIRQKKAREE
Sbjct: 421 VNVQSDWTWEQAMREIINDKRYRALKTLGERKQAFHEYLGHRKKLDAEERRIRQKKAREE 480

Query: 481 FIKMLDESKELTSSTRWSKAVSMFENDERFKAVERSRDREDLFETCIVELERKEKERAAE 540
           FIKMLDESKELTSSTRWSKAVSMFENDERFKAVERSR REDLFETCIVELERKEKERAAE
Sbjct: 481 FIKMLDESKELTSSTRWSKAVSMFENDERFKAVERSRYREDLFETCIVELERKEKERAAE 540

Query: 541 EHKKNITEYREFLESCDYIK-------------DYMRELEKEEEEQKKIQKGRLRRIERK 600
           EHKKNITEYREFLESCDYIK             DY+RELEKEEEEQKKIQKGRLRRIERK
Sbjct: 541 EHKKNITEYREFLESCDYIKVSSKWRKVQDRLEDYIRELEKEEEEQKKIQKGRLRRIERK 600

Query: 601 NRDEFRQLMEEHITAGVLTAKTFWRDYCLKVKELPQYQAVASNISGSTPKDLFEDVLKEL 660
           NRDEFRQLMEEHITAGVLTAKTFWRDYCLKVKELPQYQAVASNISGSTPKDLFEDVLKEL
Sbjct: 601 NRDEFRQLMEEHITAGVLTAKTFWRDYCLKVKELPQYQAVASNISGSTPKDLFEDVLKEL 660

Query: 661 KTKYHKEKAQIKDVMKAAKVTITSSWTFDDLKAVIEEGAPLALSDINFK----DLLERAK 720
           KTKYHKEKAQIKDVMKAAKVTITSSWTFDDLKAVIEEGAPLALSDINFK    DLLERAK
Sbjct: 661 KTKYHKEKAQIKDVMKAAKVTITSSWTFDDLKAVIEEGAPLALSDINFKLVYEDLLERAK 720

Query: 721 AKEQKEAKRRQRLADDFSRLLQLFKEISASSNWEDSKQLFEESEDYRSIGEETFAKEVFE 780
           AKE+KEAKRRQRLADDFSRLL LFKEISASSNWEDSKQLFEESEDYRSIGEETFAKEVFE
Sbjct: 721 AKEEKEAKRRQRLADDFSRLLHLFKEISASSNWEDSKQLFEESEDYRSIGEETFAKEVFE 780

Query: 781 EYVVHLQEKAKEKERKGEEEKAKKEKECEEKEKERKEKEREREKEKGRVKKDETDSENID 840
           EYVVHLQEKAKEKERKGEEEKAKKEKECEEKEKERKEKEREREKEKGRVKKDET SEN+D
Sbjct: 781 EYVVHLQEKAKEKERKGEEEKAKKEKECEEKEKERKEKEREREKEKGRVKKDETVSENVD 840

Query: 841 ANKTRVYREKKREKNKDRKRRKRHHSATDDGGSNKDEREESKKSCKRGSDRKKSRK 857
           AN+TRVYREKKREKNKDRKRRKRHHS TDDGGSNKDEREESKKSCKRGSDRKKSRK
Sbjct: 841 ANETRVYREKKREKNKDRKRRKRHHSTTDDGGSNKDEREESKKSCKRGSDRKKSRK 896

BLAST of Cp4.1LG02g06390 vs. ExPASy TrEMBL
Match: A0A6J1FJZ0 (pre-mRNA-processing protein 40A-like OS=Cucurbita moschata OX=3662 GN=LOC111446425 PE=4 SV=1)

HSP 1 Score: 1519 bits (3934), Expect = 0.0
Identity = 840/892 (94.17%), Postives = 845/892 (94.73%), Query Frame = 0

Query: 1   MDNLSQASGGQFRPNIPAQPGQTFISSSAPQFQSAGQNISSSNVGIPAGQVQPHQYPQSV 60
           MDNLSQ+SGGQFRPNIPAQPGQTFISSSAPQFQSAGQNISSSNVGIPAGQVQPHQYPQSV
Sbjct: 1   MDNLSQSSGGQFRPNIPAQPGQTFISSSAPQFQSAGQNISSSNVGIPAGQVQPHQYPQSV 60

Query: 61  PQFVPRPSHRGYITPLSQGIQMPYVPTRSRTSVPPQSQQNVPAPNNQMHGLGSHGLPISS 120
           PQFVPRPSHRGYITPLSQGIQMPYVPTRS TSVPPQSQQNV APNNQMHGLGSHGL ISS
Sbjct: 61  PQFVPRPSHRGYITPLSQGIQMPYVPTRSLTSVPPQSQQNVSAPNNQMHGLGSHGLFISS 120

Query: 121 PYTPMSQMHVPVGVGNSEPLMSSVSQATNSVSQIEQANQHSSVSTVNLAANVPVFNHPSD 180
           PYTPMSQMHVPVGVGNSEPLMSSVSQATN VSQIEQANQHSSVSTV LAANVPVFNHPSD
Sbjct: 121 PYTPMSQMHVPVGVGNSEPLMSSVSQATNPVSQIEQANQHSSVSTVKLAANVPVFNHPSD 180

Query: 181 WQGHASADGKRYYYNKKTKQSSWEKPLELMTPLERADASTVWKEFTSPDGRKYYYNKVTK 240
           WQ HASADGKRYYYNKKTKQSSWEKPLELMTPLERADASTVWKEFTSP GRKYYYNKVTK
Sbjct: 181 WQEHASADGKRYYYNKKTKQSSWEKPLELMTPLERADASTVWKEFTSPYGRKYYYNKVTK 240

Query: 241 ESKWTMPEELKLAREQAQKESVQGTQTDMAVTTSQPTPTVGLFHAETPAISTISSSISPT 300
           ESKWTMPEELKLAREQAQKESVQGTQTDMAVTTSQPTPTVGLFHAETPAISTISSSISPT
Sbjct: 241 ESKWTMPEELKLAREQAQKESVQGTQTDMAVTTSQPTPTVGLFHAETPAISTISSSISPT 300

Query: 301 VSGVALSPVPAALFVSGPPAVVHANASSMTAFESLASQDVKNPVDETSTEDIEEARKRMA 360
           VSGVALSPVPAALFVSGPPAVVH NASSMTAFESLASQDVKNPVD TSTEDIEEARKRMA
Sbjct: 301 VSGVALSPVPAALFVSGPPAVVHVNASSMTAFESLASQDVKNPVDGTSTEDIEEARKRMA 360

Query: 361 VAGKVNETVLEEKYADDEPLVFANKLEAKSAFKALLESVNVQSDWTWEQAMREIINDKRY 420
           VAGKVNETVLEEKYADDEPLVFANKLEAKSAFKALLESVNVQSDWTWEQAMREIINDKRY
Sbjct: 361 VAGKVNETVLEEKYADDEPLVFANKLEAKSAFKALLESVNVQSDWTWEQAMREIINDKRY 420

Query: 421 GALKTLGERKQAFHEYLGHRKKLDAEERRIRQKKAREEFIKMLDESKELTSSTRWSKAVS 480
            ALKTLGERKQAFHEYLGHRKKLDAEERRIRQKKAREEFIKMLDESKELTSSTRWSKAVS
Sbjct: 421 RALKTLGERKQAFHEYLGHRKKLDAEERRIRQKKAREEFIKMLDESKELTSSTRWSKAVS 480

Query: 481 MFENDERFKAVERSRDREDLFETCIVELERKEKERAAEEHKKNITEYREFLESCDYIK-- 540
           MFENDERFKAVERSR REDLFETCIVELE+KEKERAAEEHKKNITEYREFLESCDYIK  
Sbjct: 481 MFENDERFKAVERSRYREDLFETCIVELEKKEKERAAEEHKKNITEYREFLESCDYIKVS 540

Query: 541 -----------------------------DYMRELEKEEEEQKKIQKGRLRRIERKNRDE 600
                                        DY+RELEKEEEEQKKIQKGRLRRIERKNRDE
Sbjct: 541 SKWRKVQDRLEVDDRCLYLEKLDRLLIFQDYIRELEKEEEEQKKIQKGRLRRIERKNRDE 600

Query: 601 FRQLMEEHITAGVLTAKTFWRDYCLKVKELPQYQAVASNISGSTPKDLFEDVLKELKTKY 660
           FRQLMEEHITAGVLTAKTFWRDYCLKVKELPQYQAVASNISGSTPKDLFEDVLKELKTKY
Sbjct: 601 FRQLMEEHITAGVLTAKTFWRDYCLKVKELPQYQAVASNISGSTPKDLFEDVLKELKTKY 660

Query: 661 HKEKAQIKDVMKAAKVTITSSWTFDDLKAVIEEGAPLALSDINFK----DLLERAKAKEQ 720
           HKEKAQIKDVMKAAKVTITSSWTFDDLKAVIEEGAPLALSDINFK    DLLERAKAKE+
Sbjct: 661 HKEKAQIKDVMKAAKVTITSSWTFDDLKAVIEEGAPLALSDINFKLVYEDLLERAKAKEE 720

Query: 721 KEAKRRQRLADDFSRLLQLFKEISASSNWEDSKQLFEESEDYRSIGEETFAKEVFEEYVV 780
           KEAKRRQRLADDFSRLLQLFKEISASSNWEDSKQLFEESEDYR IGEETFAKEVFEEYVV
Sbjct: 721 KEAKRRQRLADDFSRLLQLFKEISASSNWEDSKQLFEESEDYRLIGEETFAKEVFEEYVV 780

Query: 781 HLQEKAKEKERKGEEEKAKKEKECEEKEKERKEKEREREKEKGRVKKDETDSENIDANKT 840
           HLQEKAKEKERKGEEEKAKKEKECEEKEKERKEKEREREKEKGRVKKDETDSENIDAN+T
Sbjct: 781 HLQEKAKEKERKGEEEKAKKEKECEEKEKERKEKEREREKEKGRVKKDETDSENIDANET 840

Query: 841 RVYREKKREKNKDRKRRKRHHSATDDGGSNKDEREESKKSCKRGSDRKKSRK 857
           RVYREKKREKNKDRKRRKRHHSATDDGGSNKDEREESKKSCKRGSDRKKSRK
Sbjct: 841 RVYREKKREKNKDRKRRKRHHSATDDGGSNKDEREESKKSCKRGSDRKKSRK 892

BLAST of Cp4.1LG02g06390 vs. ExPASy TrEMBL
Match: A0A6J1J315 (pre-mRNA-processing protein 40A-like OS=Cucurbita maxima OX=3661 GN=LOC111480826 PE=4 SV=1)

HSP 1 Score: 1504 bits (3895), Expect = 0.0
Identity = 833/892 (93.39%), Postives = 840/892 (94.17%), Query Frame = 0

Query: 1   MDNLSQASGGQFRPNIPAQPGQTFISSSAPQFQSAGQNISSSNVGIPAGQVQPHQYPQSV 60
           MDNLSQ+SGGQFRPNIPAQPGQTFISSSAPQFQSAGQNISSSNVGIPAGQVQPHQYPQSV
Sbjct: 10  MDNLSQSSGGQFRPNIPAQPGQTFISSSAPQFQSAGQNISSSNVGIPAGQVQPHQYPQSV 69

Query: 61  PQFVPRPSHRGYITPLSQGIQMPYVPTRSRTSVPPQSQQNVPAPNNQMHGLGSHGLPISS 120
           PQFVPRPSHRGYITPLSQGI+MPYVPTRS TSVPPQSQQNVPAPNNQMHGLGSHGL ISS
Sbjct: 70  PQFVPRPSHRGYITPLSQGIRMPYVPTRSLTSVPPQSQQNVPAPNNQMHGLGSHGLSISS 129

Query: 121 PYTPMSQMHVPVGVGNSEPLMSSVSQATNSVSQIEQANQHSSVSTVNLAANVPVFNHPSD 180
           PYTPMSQMHVPVGVG SEPLMSSVSQATN VSQIEQANQHSSVSTVNLAANVPVFNHPSD
Sbjct: 130 PYTPMSQMHVPVGVGKSEPLMSSVSQATNPVSQIEQANQHSSVSTVNLAANVPVFNHPSD 189

Query: 181 WQGHASADGKRYYYNKKTKQSSWEKPLELMTPLERADASTVWKEFTSPDGRKYYYNKVTK 240
           WQ HASADGKRYYYNKKTKQSSWEKPLELMTPLERADASTVW EFTSPDGRKYYYNKVTK
Sbjct: 190 WQEHASADGKRYYYNKKTKQSSWEKPLELMTPLERADASTVWMEFTSPDGRKYYYNKVTK 249

Query: 241 ESKWTMPEELKLAREQAQKESVQGTQTDMAVTTSQPTPTVGLFHAETPAISTISSSISPT 300
           ESKWTMPEELKLAREQAQKESVQGT+TDMAVTTSQPTP VGLFHAETPAISTISSSISPT
Sbjct: 250 ESKWTMPEELKLAREQAQKESVQGTETDMAVTTSQPTPIVGLFHAETPAISTISSSISPT 309

Query: 301 VSGVALSPVPAALFVSGPPAVVHANASSMTAFESLASQDVKNPVDETSTEDIEEARKRMA 360
           VSGVALSPVPAALFVSGPPAVVHANASSMT FESLASQDVKNPVDETSTEDIEEARKRMA
Sbjct: 310 VSGVALSPVPAALFVSGPPAVVHANASSMTTFESLASQDVKNPVDETSTEDIEEARKRMA 369

Query: 361 VAGKVNETVLEEKYADDEPLVFANKLEAKSAFKALLESVNVQSDWTWEQAMREIINDKRY 420
           VAGKVNETVLEEKYADDEPLVFANKLEAKSAFKALLESVNVQSDWTWEQAMREIINDKRY
Sbjct: 370 VAGKVNETVLEEKYADDEPLVFANKLEAKSAFKALLESVNVQSDWTWEQAMREIINDKRY 429

Query: 421 GALKTLGERKQAFHEYLGHRKKLDAEERRIRQKKAREEFIKMLDESKELTSSTRWSKAVS 480
           GALKTLGERKQAFHEYLGHRKKLDAEERRIRQKKAREEFIKMLDESKELTSSTRWSKAVS
Sbjct: 430 GALKTLGERKQAFHEYLGHRKKLDAEERRIRQKKAREEFIKMLDESKELTSSTRWSKAVS 489

Query: 481 MFENDERFKAVERSRDREDLFETCIVELERKEKERAAEEHKKNITEYREFLESCDYIK-- 540
           MFENDERFKAVERSRDREDLFETCIVELERKEKERAAEEHKKNITEYREFLES DYIK  
Sbjct: 490 MFENDERFKAVERSRDREDLFETCIVELERKEKERAAEEHKKNITEYREFLESWDYIKVS 549

Query: 541 -----------------------------DYMRELEKEEEEQKKIQKGRLRRIERKNRDE 600
                                        DY+RELEKEEEEQKKIQKGRLRRIERKNRDE
Sbjct: 550 SKWRKVQDRLEVDERCLYLEKLDRLLIFQDYIRELEKEEEEQKKIQKGRLRRIERKNRDE 609

Query: 601 FRQLMEEHITAGVLTAKTFWRDYCLKVKELPQYQAVASNISGSTPKDLFEDVLKELKTKY 660
           FRQLMEEHI AGVLTAKTFWRDYCLKVKELPQYQAVASNISGSTPKDLFEDVL ELKTKY
Sbjct: 610 FRQLMEEHIIAGVLTAKTFWRDYCLKVKELPQYQAVASNISGSTPKDLFEDVLAELKTKY 669

Query: 661 HKEKAQIKDVMKAAKVTITSSWTFDDLKAVIEEGAPLALSDINFK----DLLERAKAKEQ 720
           HKEKAQIKDVMKAAKVTITSSWTFDDLKAV+EEGAPLALSDINFK    DLLERAKAKE+
Sbjct: 670 HKEKAQIKDVMKAAKVTITSSWTFDDLKAVLEEGAPLALSDINFKLVYEDLLERAKAKEE 729

Query: 721 KEAKRRQRLADDFSRLLQLFKEISASSNWEDSKQLFEESEDYRSIGEETFAKEVFEEYVV 780
           KEAKRRQRLADDFSRLLQLFKEISASSNWEDSKQLFEESEDYRSIGEETFAKEVFEEYVV
Sbjct: 730 KEAKRRQRLADDFSRLLQLFKEISASSNWEDSKQLFEESEDYRSIGEETFAKEVFEEYVV 789

Query: 781 HLQEKAKEKERKGEEEKAKKEKECEEKEKERKEKEREREKEKGRVKKDETDSENIDANKT 840
           HLQEKAKEKERKGEEEKAKKEKECEEKEKERKEKERE EKEKGRVKKDETDSENIDAN+T
Sbjct: 790 HLQEKAKEKERKGEEEKAKKEKECEEKEKERKEKEREPEKEKGRVKKDETDSENIDANET 849

Query: 841 RVYREKKREKNKDRKRRKRHHSATDDGGSNKDEREESKKSCKRGSDRKKSRK 857
           R   EKKREKNKDRK RKRHHSATDDGGSNKDEREESKK CKRGSDRKKSRK
Sbjct: 850 R---EKKREKNKDRKHRKRHHSATDDGGSNKDEREESKKFCKRGSDRKKSRK 898

BLAST of Cp4.1LG02g06390 vs. ExPASy TrEMBL
Match: A0A1S3BVK4 (pre-mRNA-processing protein 40A OS=Cucumis melo OX=3656 GN=LOC103493623 PE=4 SV=1)

HSP 1 Score: 1288 bits (3332), Expect = 0.0
Identity = 735/942 (78.03%), Postives = 783/942 (83.12%), Query Frame = 0

Query: 1   MDNLSQASGGQFRPNIPAQPGQTFISSSAPQFQSAGQNISSSNVGIPAGQVQPHQYPQSV 60
           M+NLSQ+SGGQFRP IPAQPGQTFISSSA QFQ AGQNISSSNVG+PAGQVQPHQYPQS+
Sbjct: 1   MENLSQSSGGQFRPVIPAQPGQTFISSSAQQFQLAGQNISSSNVGVPAGQVQPHQYPQSM 60

Query: 61  PQFVPRPSHRGYITPLSQGIQMPYVPTRSRTSVPPQSQQNVPAPNNQMHGLGSHGLPISS 120
           PQ VPRP H  Y+TP SQ IQMPYV TR  TSVPPQSQQNV APNN MHGLG+HG+P+SS
Sbjct: 61  PQLVPRPGHPSYVTPSSQPIQMPYVQTRQLTSVPPQSQQNVAAPNNHMHGLGAHGVPLSS 120

Query: 121 PYT--PMSQMHVPVGVGNSEPLMSSVSQATNSVSQIEQANQHSSVSTVNLAANVPVFNHP 180
           PYT  PMSQMH PV VGNS+P +SS SQ  N VS ++QANQHSSVS VN AAN PVFN  
Sbjct: 121 PYTFQPMSQMHAPVSVGNSQPWLSSASQTANLVSPVDQANQHSSVSAVNPAANAPVFNQQ 180

Query: 181 S--DWQGHASADGKRYYYNKKTKQSSWEKPLELMTPLERADASTVWKEFTSPDGRKYYYN 240
           S  DWQ HASADG+RYYYNKKTKQSSWEKPLELMTPLERADASTVWKEFT+PDGRKYYYN
Sbjct: 181 SSSDWQEHASADGRRYYYNKKTKQSSWEKPLELMTPLERADASTVWKEFTAPDGRKYYYN 240

Query: 241 KVTKESKWTMPEELKLAREQAQKESVQGTQTDMAVTTSQPTPTVGLFHAETPAISTISSS 300
           KVTKESKWTMPEELKLAREQAQKE+ QGTQ D++VTT Q TP  GL HAETPAIS+++SS
Sbjct: 241 KVTKESKWTMPEELKLAREQAQKEATQGTQIDVSVTTPQSTPAAGLSHAETPAISSVNSS 300

Query: 301 ISPTVSGVALSPVPAALFVS---------------------------------------- 360
           ISPTVSGVA SPVP   FVS                                        
Sbjct: 301 ISPTVSGVATSPVPVTPFVSVSNSPSVMVTGSSAITGTPIASSTSVSGTVSSQSVAASGG 360

Query: 361 -GPPAVVHANASSMTAFESLASQDVKNPVDETSTEDIEEARKRMAVAGKVNETVLEEKYA 420
            GPPAVVHANASS+T  ESLASQDVKN VD TSTEDIEEARK MAVAGKVNETVLEEK A
Sbjct: 361 TGPPAVVHANASSVTPSESLASQDVKNTVDGTSTEDIEEARKGMAVAGKVNETVLEEKSA 420

Query: 421 DDEPLVFANKLEAKSAFKALLESVNVQSDWTWEQAMREIINDKRYGALKTLGERKQAFHE 480
           DDEPLVFANK EAK+AFKALLESVNVQSDWTWEQAMREIINDKRYGALKTLGERKQAFHE
Sbjct: 421 DDEPLVFANKQEAKNAFKALLESVNVQSDWTWEQAMREIINDKRYGALKTLGERKQAFHE 480

Query: 481 YLGHRKKLDAEERRIRQKKAREEFIKMLDESKELTSSTRWSKAVSMFENDERFKAVERSR 540
           YLGHRKKLDAEERRIRQKKAREEF KML+ESKELTSSTRWSKAVSMFENDERFKAVERSR
Sbjct: 481 YLGHRKKLDAEERRIRQKKAREEFTKMLEESKELTSSTRWSKAVSMFENDERFKAVERSR 540

Query: 541 DREDLFETCIVELERKEKERAAEEHKKNITEYREFLESCDYIK----------------- 600
           DREDLFE+ IVELERKEKERAAEEHKKNI EYR+FLESCDYIK                 
Sbjct: 541 DREDLFESYIVELERKEKERAAEEHKKNIAEYRKFLESCDYIKVSSQWRKVQDRLEDDER 600

Query: 601 --------------DYMRELEKEEEEQKKIQKGRLRRIERKNRDEFRQLMEEHITAGVLT 660
                         DY+R+LEKEEE+QKKIQK R+RRIERKNRDEFR+LMEEHI AGV T
Sbjct: 601 CSRLEKLDRLLIFQDYIRDLEKEEEDQKKIQKERVRRIERKNRDEFRKLMEEHIAAGVFT 660

Query: 661 AKTFWRDYCLKVKELPQYQAVASNISGSTPKDLFEDVLKELKTKYHKEKAQIKDVMKAAK 720
           AKTFWRDYCLKVKELPQYQAVASN SGSTPKDLFEDVL+EL+ KYH+EK QIKDV+KAAK
Sbjct: 661 AKTFWRDYCLKVKELPQYQAVASNTSGSTPKDLFEDVLEELENKYHEEKTQIKDVVKAAK 720

Query: 721 VTITSSWTFDDLKAVIEEGAPLALSDINFK----DLLERAKAKEQKEAKRRQRLADDFSR 780
           +TITSSWTFDD KA IEE   LA+SDINFK    DLLERAK KE+KEAKRRQRLADDFS 
Sbjct: 721 ITITSSWTFDDFKAAIEESGSLAVSDINFKLVYEDLLERAKEKEEKEAKRRQRLADDFSG 780

Query: 781 LLQLFKEISASSNWEDSKQLFEESEDYRSIGEETFAKEVFEEYVVHLQEKAKEKERKGEE 840
           LLQ FKEI+ SSNWEDSKQLFEESE+YRSIGEE+FAKEVFEE++ HLQEKAKEKERK EE
Sbjct: 781 LLQSFKEITTSSNWEDSKQLFEESEEYRSIGEESFAKEVFEEHITHLQEKAKEKERKREE 840

Query: 841 EKAKKEKECEEKEK----ERKEKEREREKEKGRVKKDETDSENIDANKTRVYRE-KKREK 857
           EKAKKEKE EEKEK    ERKEK+REREKEKGRVKKDETDSEN+D + T VYRE KKR+K
Sbjct: 841 EKAKKEKEREEKEKRKEKERKEKDREREKEKGRVKKDETDSENVDVSDTHVYREDKKRDK 900

BLAST of Cp4.1LG02g06390 vs. ExPASy TrEMBL
Match: A0A0A0L0K0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G644700 PE=4 SV=1)

HSP 1 Score: 1283 bits (3319), Expect = 0.0
Identity = 734/942 (77.92%), Postives = 781/942 (82.91%), Query Frame = 0

Query: 1   MDNLSQASGGQFRPNIPAQPGQTFISSSAPQFQSAGQNISSSNVGIPAGQVQPHQYPQSV 60
           M+NLSQ+SGGQFRP IPAQPGQ FISSSA QFQ AGQNISSSNVG+PAGQVQPHQYPQS+
Sbjct: 1   MENLSQSSGGQFRPVIPAQPGQAFISSSAQQFQLAGQNISSSNVGVPAGQVQPHQYPQSM 60

Query: 61  PQFVPRPSHRGYITPLSQGIQMPYVPTRSRTSVPPQSQQNVPAPNNQMHGLGSHGLPISS 120
           PQ V RP H  Y+TP SQ IQMPYV TR  TSVPPQSQQNV APNN MHGLG+HGLP+SS
Sbjct: 61  PQLVQRPGHPSYVTPSSQPIQMPYVQTRPLTSVPPQSQQNVAAPNNHMHGLGAHGLPLSS 120

Query: 121 PYT--PMSQMHVPVGVGNSEPLMSSVSQATNSVSQIEQANQHSSVSTVNLAANVPVFNHP 180
           PYT  PMSQMH PV VGNS+P +SS SQ TN VS I+QANQHSSVS VN AAN PVFN  
Sbjct: 121 PYTFQPMSQMHAPVSVGNSQPWLSSASQTTNLVSPIDQANQHSSVSAVNPAANAPVFNQQ 180

Query: 181 --SDWQGHASADGKRYYYNKKTKQSSWEKPLELMTPLERADASTVWKEFTSPDGRKYYYN 240
             SDWQ HASADG+RYYYNKKTKQSSWEKPLELMTPLERADASTVWKEFT+PDGRKYYYN
Sbjct: 181 LSSDWQEHASADGRRYYYNKKTKQSSWEKPLELMTPLERADASTVWKEFTAPDGRKYYYN 240

Query: 241 KVTKESKWTMPEELKLAREQAQKESVQGTQTDMAVTTSQPTPTVGLFHAETPAISTISSS 300
           KVTKESKWTMPEELKLAREQAQKE+ QGTQTD++V   QPT   GL HAETPAIS+++SS
Sbjct: 241 KVTKESKWTMPEELKLAREQAQKEATQGTQTDISVMAPQPTLAAGLSHAETPAISSVNSS 300

Query: 301 ISPTVSGVALSPVPAALFVS---------------------------------------- 360
           ISPTVSGVA SPVP   FVS                                        
Sbjct: 301 ISPTVSGVATSPVPVTPFVSVSNSPSVMVTGSSAITGTPIASTTSVSGTVSSQSVAASGG 360

Query: 361 -GPPAVVHANASSMTAFESLASQDVKNPVDETSTEDIEEARKRMAVAGKVNETVLEEKYA 420
            GPPAVVHANASS+T FESLASQDVKN VD TSTEDIEEARK MAVAGKVNETVLEEK A
Sbjct: 361 TGPPAVVHANASSVTPFESLASQDVKNTVDGTSTEDIEEARKGMAVAGKVNETVLEEKSA 420

Query: 421 DDEPLVFANKLEAKSAFKALLESVNVQSDWTWEQAMREIINDKRYGALKTLGERKQAFHE 480
           DDEPLVFANK EAK+AFKALLESVNVQSDWTWEQAMREIINDKRYGALKTLGERKQAFHE
Sbjct: 421 DDEPLVFANKQEAKNAFKALLESVNVQSDWTWEQAMREIINDKRYGALKTLGERKQAFHE 480

Query: 481 YLGHRKKLDAEERRIRQKKAREEFIKMLDESKELTSSTRWSKAVSMFENDERFKAVERSR 540
           YLGHRKKLDAEERRIRQKKAREEF KML+ESKELTSSTRWSKAVSMFENDERFKAVERSR
Sbjct: 481 YLGHRKKLDAEERRIRQKKAREEFTKMLEESKELTSSTRWSKAVSMFENDERFKAVERSR 540

Query: 541 DREDLFETCIVELERKEKERAAEEHKKNITEYREFLESCDYIK----------------- 600
           DREDLFE+ IVELERKEKERAAEEHKKNI EYR+FLESCDYIK                 
Sbjct: 541 DREDLFESYIVELERKEKERAAEEHKKNIAEYRKFLESCDYIKVSSQWRKVQDRLEDDER 600

Query: 601 --------------DYMRELEKEEEEQKKIQKGRLRRIERKNRDEFRQLMEEHITAGVLT 660
                         DY+R+LEKEEE+QKKIQK R+RRIERKNRDEFR+LMEEHI AGV T
Sbjct: 601 CSRLEKLDRLLIFQDYIRDLEKEEEDQKKIQKERVRRIERKNRDEFRKLMEEHIAAGVFT 660

Query: 661 AKTFWRDYCLKVKELPQYQAVASNISGSTPKDLFEDVLKELKTKYHKEKAQIKDVMKAAK 720
           AKTFWRDYCLKVKELPQYQAVASN SGSTPKDLFEDVL++L+ KYH+EK QIKDV+KAAK
Sbjct: 661 AKTFWRDYCLKVKELPQYQAVASNTSGSTPKDLFEDVLEDLENKYHEEKTQIKDVVKAAK 720

Query: 721 VTITSSWTFDDLKAVIEEGAPLALSDINFK----DLLERAKAKEQKEAKRRQRLADDFSR 780
           +TITSSWTFDD KA IEE   LA+SDINFK    DLLERAK KE+KEAKRRQRLADDFS 
Sbjct: 721 ITITSSWTFDDFKAAIEESGSLAVSDINFKLVYEDLLERAKEKEEKEAKRRQRLADDFSG 780

Query: 781 LLQLFKEISASSNWEDSKQLFEESEDYRSIGEETFAKEVFEEYVVHLQEKAKEKERKGEE 840
           LLQ  KEI+ SSNWEDSKQLFEESE+YRSIGEE+FAKEVFEE++ HLQEKAKEKERK EE
Sbjct: 781 LLQSLKEITTSSNWEDSKQLFEESEEYRSIGEESFAKEVFEEHITHLQEKAKEKERKREE 840

Query: 841 EKAKKEKECEEKEK----ERKEKEREREKEKGRVKKDETDSENIDANKTRVYRE-KKREK 857
           EKAKKEKE EEKEK    ERKEK+REREKEKGRVKKDETDSEN+D + T VYRE KKR+K
Sbjct: 841 EKAKKEKEREEKEKRKEKERKEKDREREKEKGRVKKDETDSENVDVSDTHVYREDKKRDK 900

BLAST of Cp4.1LG02g06390 vs. ExPASy TrEMBL
Match: A0A6J1CJ95 (pre-mRNA-processing protein 40A OS=Momordica charantia OX=3673 GN=LOC111011666 PE=4 SV=1)

HSP 1 Score: 1279 bits (3310), Expect = 0.0
Identity = 729/948 (76.90%), Postives = 786/948 (82.91%), Query Frame = 0

Query: 1   MDNLSQASGGQFRPNIPAQPGQTFISSSAPQFQSAGQNISSSNVGIPAGQVQPHQYPQSV 60
           M+NLSQ+SGGQFRP IPAQPGQTFISS+A QFQ AGQNISSSNVG+P GQVQPHQY QS+
Sbjct: 1   MENLSQSSGGQFRPIIPAQPGQTFISSAAQQFQLAGQNISSSNVGVPTGQVQPHQYHQSM 60

Query: 61  PQFVPRPSHRGYITPLSQGIQMPYVPTRSRTSVPPQSQQNVPAPNNQMHGLGSHGLPISS 120
            Q V RPSH  Y+TP SQ IQMPY  TR  TSVPPQS Q+V APNN MHG+G+HGLP+SS
Sbjct: 61  QQLVSRPSHPSYVTPSSQPIQMPYAQTRPLTSVPPQSHQSVAAPNNHMHGMGAHGLPLSS 120

Query: 121 PYT--PMSQMHVPVGVGNSEPLMSSVSQATNSVSQIEQANQHSSVSTVNLAANVPVFNHP 180
           PYT  PMSQ+H PVGVGNS+P +SSV+Q TN VS +EQANQHSSVS +N AANVPVFN  
Sbjct: 121 PYTFQPMSQVHAPVGVGNSQPWLSSVNQTTNLVSPVEQANQHSSVSAINPAANVPVFNQQ 180

Query: 181 S--DWQGHASADGKRYYYNKKTKQSSWEKPLELMTPLERADASTVWKEFTSPDGRKYYYN 240
           S  DWQ HASADG+RYYYNKKTKQSSWEKPLELMTPLERADASTVWKEFT+PDGRKYYYN
Sbjct: 181 SSSDWQEHASADGRRYYYNKKTKQSSWEKPLELMTPLERADASTVWKEFTAPDGRKYYYN 240

Query: 241 KVTKESKWTMPEELKLAREQAQKESVQGTQTDMAVTTSQPTPTVGLFHAETPAISTISSS 300
           KVTKESKWTMPEELKLAREQAQKE+V GTQTD+AVTT QP P VGL HAETPA+ +I+SS
Sbjct: 241 KVTKESKWTMPEELKLAREQAQKEAVHGTQTDIAVTTPQPPPAVGLSHAETPAVPSINSS 300

Query: 301 ISPTVSGVALSPVPAALFVS---------------------------------------- 360
           ISP VSGVA SPVP   FVS                                        
Sbjct: 301 ISPMVSGVASSPVPVTPFVSVSSSPSVAVSGSLAVTGTPIAATTSVTGVQSSVMTVASQS 360

Query: 361 -------GPPAVVHANASSMTAFESLASQDVKNPVDETSTEDIEEARKRMAVAGKVNETV 420
                  GPPAVVHANASS+T  ESLASQDVKNPVD TS+EDIEEARK MAVAGKVNETV
Sbjct: 361 VAASGGTGPPAVVHANASSVTGLESLASQDVKNPVDGTSSEDIEEARKGMAVAGKVNETV 420

Query: 421 LEEKYADDEPLVFANKLEAKSAFKALLESVNVQSDWTWEQAMREIINDKRYGALKTLGER 480
           LEE+ ADDEPLVFANKLEAK+AFKALLESVNVQSDWTWEQAMREIINDKRYGALKTLGER
Sbjct: 421 LEERSADDEPLVFANKLEAKNAFKALLESVNVQSDWTWEQAMREIINDKRYGALKTLGER 480

Query: 481 KQAFHEYLGHRKKLDAEERRIRQKKAREEFIKMLDESKELTSSTRWSKAVSMFENDERFK 540
           KQAFHEYLGHRKKLDAEERR+RQKKAREEF KML+ESKEL SSTRWSKAVSMFENDERFK
Sbjct: 481 KQAFHEYLGHRKKLDAEERRVRQKKAREEFTKMLEESKELASSTRWSKAVSMFENDERFK 540

Query: 541 AVERSRDREDLFETCIVELERKEKERAAEEHKKNITEYREFLESCDYIK----------- 600
           AVER+RDREDLFE+ IVELERKEKE+AAEE KKNI EYR+FLESCDYIK           
Sbjct: 541 AVERARDREDLFESYIVELERKEKEKAAEEXKKNIAEYRKFLESCDYIKVSSQWRKVQDR 600

Query: 601 --------------------DYMRELEKEEEEQKKIQKGRLRRIERKNRDEFRQLMEEHI 660
                               DY+R+LEKEE+EQKKIQK R+RRIERKNRDEFR+LMEEHI
Sbjct: 601 LEDDERCSRLEKLDRLLIFQDYIRDLEKEEDEQKKIQKERVRRIERKNRDEFRKLMEEHI 660

Query: 661 TAGVLTAKTFWRDYCLKVKELPQYQAVASNISGSTPKDLFEDVLKELKTKYHKEKAQIKD 720
           + GVLTAKTFWRDYCLKVKELPQYQAVASNISGSTPKDLFEDVL+EL+ KYH+EKAQIKD
Sbjct: 661 SVGVLTAKTFWRDYCLKVKELPQYQAVASNISGSTPKDLFEDVLEELENKYHEEKAQIKD 720

Query: 721 VMKAAKVTITSSWTFDDLKAVIEEGAPLALSDINFK----DLLERAKAKEQKEAKRRQRL 780
           VMKAAK+TITSSWTFDD KA IEEG  L +SDINFK    DLL+RAK KE+KEAKRRQRL
Sbjct: 721 VMKAAKITITSSWTFDDFKAAIEEGGSLTVSDINFKLVYEDLLDRAKEKEEKEAKRRQRL 780

Query: 781 ADDFSRLLQLFKEISASSNWEDSKQLFEESEDYRSIGEETFAKEVFEEYVVHLQEKAKEK 840
           ADDFSRLLQ FKEIS SSNWEDSKQLFEESE+YRSIGEE+FA+EVFEEY++HLQEKAKEK
Sbjct: 781 ADDFSRLLQSFKEISTSSNWEDSKQLFEESEEYRSIGEESFAREVFEEYIMHLQEKAKEK 840

Query: 841 ERKGEEEKAKKEKECEEKEK----ERKEKEREREKEKGRVKKDETDSENIDANKTRVYRE 857
           ERK EEEKAKKEKE EEKEK    ERK+KEREREKEKGR+KKDE+DSEN+DA++T  YRE
Sbjct: 841 ERKREEEKAKKEKEREEKEKRKEKERKDKEREREKEKGRIKKDESDSENVDASETHGYRE 900

BLAST of Cp4.1LG02g06390 vs. TAIR 10
Match: AT1G44910.1 (pre-mRNA-processing protein 40A )

HSP 1 Score: 736.5 bits (1900), Expect = 2.7e-212
Identity = 477/939 (50.80%), Postives = 633/939 (67.41%), Query Frame = 0

Query: 2   DNLSQASGGQFRPNIPAQPGQTFISSSAPQFQSAGQNISSSNVGIPAGQVQPHQYPQSVP 61
           +N  Q+SG QFRP +P Q GQ F+ +++  F   G          P  Q QP QY Q + 
Sbjct: 3   NNPPQSSGTQFRPMVPGQQGQHFVPAASQPFHPYGH-------VPPNVQSQPPQYSQPIQ 62

Query: 62  Q---FVPRPSHRGYITPLSQGIQMPYVPT-RSRTSVPPQSQQNVPAPNNQMHGLGSHGLP 121
           Q   F  RP    +IT  SQ + +PY+ T +  TS   Q Q N P     M G  + G P
Sbjct: 63  QQQLFPVRPGQPVHITSSSQAVSVPYIQTNKILTSGSTQPQPNAP----PMTGFATSGPP 122

Query: 122 ISSPYT----------------PMSQMHVPVGV---GNSEPLMSSVSQATNSVSQIEQAN 181
            SSPYT                P SQMHV  GV    N+ P+   V+Q+T+ VS ++Q  
Sbjct: 123 FSSPYTFVPSSYPQQQPTSLVQPNSQMHV-AGVPPAANTWPV--PVNQSTSLVSPVQQTG 182

Query: 182 QHSSVSTVNLAANVPVFNHPSDWQGHASADGKRYYYNKKTKQSSWEKPLELMTPLERADA 241
           Q + V+      N+      SDWQ H SADG++YYYNK+TKQS+WEKPLELMTPLERADA
Sbjct: 183 QQTPVAVSTDPGNLTP-QSASDWQEHTSADGRKYYYNKRTKQSNWEKPLELMTPLERADA 242

Query: 242 STVWKEFTSPDGRKYYYNKVTKESKWTMPEELKLAREQAQKESVQGTQTDMAVTTSQPTP 301
           STVWKEFT+P+G+KYYYNKVTKESKWT+PE+LKLAREQAQ  S    +T ++   S P  
Sbjct: 243 STVWKEFTTPEGKKYYYNKVTKESKWTIPEDLKLAREQAQLAS---EKTSLSEAGSTPLS 302

Query: 302 TVGLFHAETPAISTISS---SISPTVSGVALSPVPAALF--VSGPPAVVHANASS----- 361
                 ++  A+ST++S   S S  ++G + SP+ A L   V+ PP+V     +S     
Sbjct: 303 HHAASSSDL-AVSTVTSVVPSTSSALTGHSSSPIQAGLAVPVTRPPSVAPVTPTSGAISD 362

Query: 362 ----MTAFESLASQDVKNPVDETSTEDIEEARKRMAVAGKVNETVLEEKYADDEPLVFAN 421
                   ++L+S+   +  D  + ++ E   K M+V GK N +   +K   +EP+V+A 
Sbjct: 363 TEATTIKGDNLSSRGADDSNDGATAQNNEAENKEMSVNGKANLSPAGDKANVEEPMVYAT 422

Query: 422 KLEAKSAFKALLESVNVQSDWTWEQAMREIINDKRYGALKTLGERKQAFHEYLGHRKKLD 481
           K EAK+AFK+LLESVNV SDWTWEQ ++EI++DKRYGAL+TLGERKQAF+EYLG RKK++
Sbjct: 423 KQEAKAAFKSLLESVNVHSDWTWEQTLKEIVHDKRYGALRTLGERKQAFNEYLGQRKKVE 482

Query: 482 AEERRIRQKKAREEFIKMLDESKELTSSTRWSKAVSMFENDERFKAVERSRDREDLFETC 541
           AEERR RQKKAREEF+KML+E +EL+SS +WSKA+S+FEND+RFKAV+R RDREDLF+  
Sbjct: 483 AEERRRRQKKAREEFVKMLEECEELSSSLKWSKAMSLFENDQRFKAVDRPRDREDLFDNY 542

Query: 542 IVELERKEKERAAEEHKKNITEYREFLESCDYIK-------------------------- 601
           IVELERKE+E+AAEEH++ + +YR+FLE+CDYIK                          
Sbjct: 543 IVELERKEREKAAEEHRQYMADYRKFLETCDYIKAGTQWRKIQDRLEDDDRCSCLEKIDR 602

Query: 602 -----DYMRELEKEEEEQKKIQKGRLRRIERKNRDEFRQLMEEHITAGVLTAKTFWRDYC 661
                +Y+ +LEKEEEE K+++K  +RR ERKNRD FR L+EEH+ AG+LTAKT+W DYC
Sbjct: 603 LIGFEEYILDLEKEEEELKRVEKEHVRRAERKNRDAFRTLLEEHVAAGILTAKTYWLDYC 662

Query: 662 LKVKELPQYQAVASNISGSTPKDLFEDVLKELKTKYHKEKAQIKDVMKAAKVTITSSWTF 721
           +++K+LPQYQAVASN SGSTPKDLFEDV +EL+ +YH++K+ +KD MK+ K+++ SSW F
Sbjct: 663 IELKDLPQYQAVASNTSGSTPKDLFEDVTEELEKQYHEDKSYVKDAMKSRKISMVSSWLF 722

Query: 722 DDLKAVIEEG-APLALSDINFK----DLLERAKAKEQKEAKRRQRLADDFSRLLQLFKEI 781
           +D K+ I E  +   +SDIN K    DL+ R K KE+KEA++ QRLA++F+ LL  FKEI
Sbjct: 723 EDFKSAISEDLSTQQISDINLKLIYDDLVGRVKEKEEKEARKLQRLAEEFTNLLHTFKEI 782

Query: 782 SASSNWEDSKQLFEESEDYRSIGEETFAKEVFEEYVVHLQEKAKEKERKGEEEKAKKEKE 841
           + +SNWEDSKQL EES++YRSIG+E+ ++ +FEEY+  LQEKAKEKERK +EEK +KEKE
Sbjct: 783 TVASNWEDSKQLVEESQEYRSIGDESVSQGLFEEYITSLQEKAKEKERKRDEEKVRKEKE 842

Query: 842 CEEKE------KERKEKEREREKEKG--RVKKDETDSENIDANKTRVYREKKREKNKDRK 858
            +EKE      KER+EKEREREKEKG  R K++E+D E           EK++ K++DRK
Sbjct: 843 RDEKEKRKDKDKERREKEREREKEKGKERSKREESDGETAMDVSEGHKDEKRKGKDRDRK 902

BLAST of Cp4.1LG02g06390 vs. TAIR 10
Match: AT1G44910.2 (pre-mRNA-processing protein 40A )

HSP 1 Score: 736.5 bits (1900), Expect = 2.7e-212
Identity = 477/939 (50.80%), Postives = 633/939 (67.41%), Query Frame = 0

Query: 2   DNLSQASGGQFRPNIPAQPGQTFISSSAPQFQSAGQNISSSNVGIPAGQVQPHQYPQSVP 61
           +N  Q+SG QFRP +P Q GQ F+ +++  F   G          P  Q QP QY Q + 
Sbjct: 3   NNPPQSSGTQFRPMVPGQQGQHFVPAASQPFHPYGH-------VPPNVQSQPPQYSQPIQ 62

Query: 62  Q---FVPRPSHRGYITPLSQGIQMPYVPT-RSRTSVPPQSQQNVPAPNNQMHGLGSHGLP 121
           Q   F  RP    +IT  SQ + +PY+ T +  TS   Q Q N P     M G  + G P
Sbjct: 63  QQQLFPVRPGQPVHITSSSQAVSVPYIQTNKILTSGSTQPQPNAP----PMTGFATSGPP 122

Query: 122 ISSPYT----------------PMSQMHVPVGV---GNSEPLMSSVSQATNSVSQIEQAN 181
            SSPYT                P SQMHV  GV    N+ P+   V+Q+T+ VS ++Q  
Sbjct: 123 FSSPYTFVPSSYPQQQPTSLVQPNSQMHV-AGVPPAANTWPV--PVNQSTSLVSPVQQTG 182

Query: 182 QHSSVSTVNLAANVPVFNHPSDWQGHASADGKRYYYNKKTKQSSWEKPLELMTPLERADA 241
           Q + V+      N+      SDWQ H SADG++YYYNK+TKQS+WEKPLELMTPLERADA
Sbjct: 183 QQTPVAVSTDPGNLTP-QSASDWQEHTSADGRKYYYNKRTKQSNWEKPLELMTPLERADA 242

Query: 242 STVWKEFTSPDGRKYYYNKVTKESKWTMPEELKLAREQAQKESVQGTQTDMAVTTSQPTP 301
           STVWKEFT+P+G+KYYYNKVTKESKWT+PE+LKLAREQAQ  S    +T ++   S P  
Sbjct: 243 STVWKEFTTPEGKKYYYNKVTKESKWTIPEDLKLAREQAQLAS---EKTSLSEAGSTPLS 302

Query: 302 TVGLFHAETPAISTISS---SISPTVSGVALSPVPAALF--VSGPPAVVHANASS----- 361
                 ++  A+ST++S   S S  ++G + SP+ A L   V+ PP+V     +S     
Sbjct: 303 HHAASSSDL-AVSTVTSVVPSTSSALTGHSSSPIQAGLAVPVTRPPSVAPVTPTSGAISD 362

Query: 362 ----MTAFESLASQDVKNPVDETSTEDIEEARKRMAVAGKVNETVLEEKYADDEPLVFAN 421
                   ++L+S+   +  D  + ++ E   K M+V GK N +   +K   +EP+V+A 
Sbjct: 363 TEATTIKGDNLSSRGADDSNDGATAQNNEAENKEMSVNGKANLSPAGDKANVEEPMVYAT 422

Query: 422 KLEAKSAFKALLESVNVQSDWTWEQAMREIINDKRYGALKTLGERKQAFHEYLGHRKKLD 481
           K EAK+AFK+LLESVNV SDWTWEQ ++EI++DKRYGAL+TLGERKQAF+EYLG RKK++
Sbjct: 423 KQEAKAAFKSLLESVNVHSDWTWEQTLKEIVHDKRYGALRTLGERKQAFNEYLGQRKKVE 482

Query: 482 AEERRIRQKKAREEFIKMLDESKELTSSTRWSKAVSMFENDERFKAVERSRDREDLFETC 541
           AEERR RQKKAREEF+KML+E +EL+SS +WSKA+S+FEND+RFKAV+R RDREDLF+  
Sbjct: 483 AEERRRRQKKAREEFVKMLEECEELSSSLKWSKAMSLFENDQRFKAVDRPRDREDLFDNY 542

Query: 542 IVELERKEKERAAEEHKKNITEYREFLESCDYIK-------------------------- 601
           IVELERKE+E+AAEEH++ + +YR+FLE+CDYIK                          
Sbjct: 543 IVELERKEREKAAEEHRQYMADYRKFLETCDYIKAGTQWRKIQDRLEDDDRCSCLEKIDR 602

Query: 602 -----DYMRELEKEEEEQKKIQKGRLRRIERKNRDEFRQLMEEHITAGVLTAKTFWRDYC 661
                +Y+ +LEKEEEE K+++K  +RR ERKNRD FR L+EEH+ AG+LTAKT+W DYC
Sbjct: 603 LIGFEEYILDLEKEEEELKRVEKEHVRRAERKNRDAFRTLLEEHVAAGILTAKTYWLDYC 662

Query: 662 LKVKELPQYQAVASNISGSTPKDLFEDVLKELKTKYHKEKAQIKDVMKAAKVTITSSWTF 721
           +++K+LPQYQAVASN SGSTPKDLFEDV +EL+ +YH++K+ +KD MK+ K+++ SSW F
Sbjct: 663 IELKDLPQYQAVASNTSGSTPKDLFEDVTEELEKQYHEDKSYVKDAMKSRKISMVSSWLF 722

Query: 722 DDLKAVIEEG-APLALSDINFK----DLLERAKAKEQKEAKRRQRLADDFSRLLQLFKEI 781
           +D K+ I E  +   +SDIN K    DL+ R K KE+KEA++ QRLA++F+ LL  FKEI
Sbjct: 723 EDFKSAISEDLSTQQISDINLKLIYDDLVGRVKEKEEKEARKLQRLAEEFTNLLHTFKEI 782

Query: 782 SASSNWEDSKQLFEESEDYRSIGEETFAKEVFEEYVVHLQEKAKEKERKGEEEKAKKEKE 841
           + +SNWEDSKQL EES++YRSIG+E+ ++ +FEEY+  LQEKAKEKERK +EEK +KEKE
Sbjct: 783 TVASNWEDSKQLVEESQEYRSIGDESVSQGLFEEYITSLQEKAKEKERKRDEEKVRKEKE 842

Query: 842 CEEKE------KERKEKEREREKEKG--RVKKDETDSENIDANKTRVYREKKREKNKDRK 858
            +EKE      KER+EKEREREKEKG  R K++E+D E           EK++ K++DRK
Sbjct: 843 RDEKEKRKDKDKERREKEREREKEKGKERSKREESDGETAMDVSEGHKDEKRKGKDRDRK 902

BLAST of Cp4.1LG02g06390 vs. TAIR 10
Match: AT3G19670.1 (pre-mRNA-processing protein 40B )

HSP 1 Score: 481.5 bits (1238), Expect = 1.6e-135
Identity = 374/952 (39.29%), Postives = 527/952 (55.36%), Query Frame = 0

Query: 11  QFRPNIPAQPGQTFISSSAPQFQSAGQNISSSNVGIPAGQVQPHQYPQSVPQFVPRPSHR 70
           QF P I A   +     S+  FQ  G+  +  ++G P     P Q  QS+     RPS  
Sbjct: 34  QFLPTIQAPQSEQVARLSSQNFQCVGRGGTVLSIGYPPQSYAP-QLLQSMHHSHERPSQ- 93

Query: 71  GYITPLSQGIQMPYVPTRSRTSVPPQSQQNVPAPNNQMHGLGSHGLPISSPYTPMSQMHV 130
                L+Q +Q+ +VP    T +   SQ NV           + G  +  PY     + +
Sbjct: 94  -----LNQ-VQVQHVPLGPPTLI---SQPNVSI---------ASGTSLHQPYVQTPDIGM 153

Query: 131 PVGVGNSEPLMSSVSQATNSVSQI----------EQANQHSSVSTVNLAANV--PVFNHP 190
           P G G    L S  S  +   S++           QA Q +S+   +  +++  P F  P
Sbjct: 154 P-GFGGPRALFSYPSATSYEGSRVPPQVTGPSIHSQAQQRASIIHTSAESSIMNPTFEQP 213

Query: 191 --------------SDWQGHASADGKRYYYNKKTKQSSWEKPLELMTPLERADASTVWKE 250
                         +DW  H SADG++Y++NK+TK+S+WEKP+ELMT  ERADA T WKE
Sbjct: 214 KAAFLKPLPSQKALTDWVEHTSADGRKYFFNKRTKKSTWEKPVELMTLFERADARTDWKE 273

Query: 251 FTSPDGRKYYYNKVTKESKWTMPEELKLAREQAQKESVQGTQTDMAVTTSQPTPTVGLFH 310
            +SPDGRKYYYNK+TK+S WTMPEE+K+ REQA+  SVQG   +  +  S+         
Sbjct: 274 HSSPDGRKYYYNKITKQSTWTMPEEMKIVREQAEIASVQGPHAEGIIDASEVLTRSDTAS 333

Query: 311 AETPAISTISSSISPTVSGVALS---PVPAALFVSGPPAVVHANASSMTAFESLASQDVK 370
              P      +S S  V  + L+     PA++  S  P V + +   M+A E+    D  
Sbjct: 334 TAAPTGLPSQTSTSEGVEKLTLTSDLKQPASVPGSSSP-VENVDRVQMSADETSQLCDTS 393

Query: 371 N------PVDETSTEDI------------------------------EEARKRMAVAGKV 430
                  PV ETS   +                              +E++K M  + KV
Sbjct: 394 ETDGLSVPVTETSAATLVEKDEISVGNSGDSDDMSTKNANQGSGSGPKESQKPMVESEKV 453

Query: 431 NETVLEEKYADDEPLVFANKLEAKSAFKALLESVNVQSDWTWEQAMREIINDKRYGALKT 490
            E+  EEK    E   F NKLEA   FK+LL+S  V SDWTWEQAMREIINDKRYGAL+T
Sbjct: 454 -ESQTEEKQIHQESFSFNNKLEAVDVFKSLLKSAKVGSDWTWEQAMREIINDKRYGALRT 513

Query: 491 LGERKQAFHEYLGHRKKLDAEERRIRQKKAREEFIKMLDESKELTSSTRWSKAVSMFEND 550
           LGERKQAF+E+L   K+   EER  RQKK  E+F +ML+E  ELT STRWSK V+MFE+D
Sbjct: 514 LGERKQAFNEFLLQTKRAAEEERLARQKKLYEDFKRMLEECVELTPSTRWSKTVTMFEDD 573

Query: 551 ERFKAVERSRDREDLFETCIVELERKEKERAAEEHKKNITEYREFLESCDYIK------- 610
           ERFKA+ER +DR ++FE  + EL+ K + +A E+ K+NI EY+ FLESC++IK       
Sbjct: 574 ERFKALEREKDRRNIFEDHVSELKEKGRVKALEDRKRNIIEYKRFLESCNFIKPNSQWRK 633

Query: 611 ------------------------DYMRELEKEEEEQKKIQKGRLRRIERKNRDEFRQLM 670
                                   +Y+R+LE+EEEE+KKIQK  L+++ERK+RDEF  L+
Sbjct: 634 VQDRLEVDERCSRLEKIDQLEIFQEYLRDLEREEEEKKKIQKEELKKVERKHRDEFHGLL 693

Query: 671 EEHITAGVLTAKTFWRDYCLKVKELPQYQAVASNISGSTPKDLFEDVLKELKTKYHKEKA 730
           +EHI  G LTAKT WRDY +KVK+LP Y A+ASN SG+TPKDLFED +++LK + H+ K+
Sbjct: 694 DEHIATGELTAKTIWRDYLMKVKDLPVYSAIASNSSGATPKDLFEDAVEDLKKRDHELKS 753

Query: 731 QIKDVMKAAKVTITSSWTFDDLKAVIEE--GAPLALSDIN----FKDLLERAKAKEQKEA 790
           QIKDV+K  KV +++  TFD+ K  I E  G PL + D+     F DLLERAK KE+KEA
Sbjct: 754 QIKDVLKLRKVNLSAGSTFDEFKVSISEDIGFPL-IPDVRLKLVFDDLLERAKEKEEKEA 813

Query: 791 KRRQRLADDFSRLLQLFKEISASSNWEDSKQLFEESEDYRSIGEETFAKEVFEEYVVHLQ 850
           +++ R  +    +L+ FK+I+ASS+WE+ K L E SE   +IG+E+F K  FE+YV  L+
Sbjct: 814 RKQTRQTEKLVDMLRSFKDITASSSWEELKHLVEGSEKCSTIGDESFRKRCFEDYVSLLK 873

Query: 851 EKAKEKERKGEEEKAKKEKECEEKEKERKEKEREREKEK-GRVKKDETDSENIDANKTRV 860
           E++   ++  +  +  +E+  + ++K  +EK+R RE++     KK      N D N+   
Sbjct: 874 EQSNRIKQNKKVPEDVREEHDKGRDKYGREKDRVRERDSDDHHKKGAAGKYNHDMNEPHG 933

BLAST of Cp4.1LG02g06390 vs. TAIR 10
Match: AT3G19840.1 (pre-mRNA-processing protein 40C )

HSP 1 Score: 57.4 bits (137), Expect = 7.4e-08
Identity = 191/811 (23.55%), Postives = 338/811 (41.68%), Query Frame = 0

Query: 13  RPNIPAQPGQTFISSSAPQFQSAGQNISSSNVGIPAGQVQ------PHQYPQSVPQFVPR 72
           RP   A PG   + +S P F  +    ++   G+ AG  Q      PH YP         
Sbjct: 96  RPGTLAPPG---LMTSPPAFPGSNPFSTTPRPGMSAGPAQMNPGIHPHMYP--------- 155

Query: 73  PSHRGYITPLSQGIQMPYVPTRSRTSVPPQSQQNVPAPNNQMHGLGSHGLPIS--SPYTP 132
           P H    TP    +Q P     S   +P       P  ++     GS+  P+   SP  P
Sbjct: 156 PYHSLPGTPQGMWLQPP-----SMGGIP-----RAPFLSHPTTFPGSYPFPVRGISPNLP 215

Query: 133 MSQMHVPVGVGNSEPL--MSSVSQATNSVSQIEQANQHSSVSTV-NLAANVPVFNHPSDW 192
            S  H P+G   + P+  + +V         I    +   +S + + A +  V N    W
Sbjct: 216 YSGSH-PLG---ASPMGSVGNVHALPGRQPDISPGRKTEELSGIDDRAGSQLVGNRLDAW 275

Query: 193 QGHASADGKRYYYNKKTKQSSWEKPLEL-----MTPLERADAS------TVWKEFTSPDG 252
             H S  G  YYYN  T QS++EKP          P++    S      T W   ++ DG
Sbjct: 276 TAHKSEAGVLYYYNSVTGQSTYEKPPGFGGEPDKVPVQPIPVSMESLPGTDWALVSTNDG 335

Query: 253 RKYYYNKVTKESKWTMPEELKLAREQAQKESVQGTQTDMAVTTSQPTPTVGLFHAETPAI 312
           +KYYYN  TK S W +P E+K   ++ ++ +++   +  +   ++      L     PAI
Sbjct: 336 KKYYYNNKTKVSSWQIPAEVKDFGKKLEERAMESVASVPSADLTEKGS--DLTSLSAPAI 395

Query: 313 ST---ISSSISPTVSG-VALSPVPAALFVSGPP--AVVHANASSMTAFESLASQDVKNPV 372
           S     ++S+  T  G  AL  V   L  SG P  + + + A+S    E   S +  N  
Sbjct: 396 SNGGRDAASLKTTNFGSSALDLVKKKLHDSGMPVSSTITSEANSGKTTEVTPSGESGN-- 455

Query: 373 DETSTEDIEEARKRMAVAGKVNETVLEEKYADDEPLVFANKLEAKSAFKALLESVNVQSD 432
              ST  +++A      AG ++++  + +  D  P    +K E    FK +L+   +   
Sbjct: 456 ---STGKVKDA----PGAGALSDSSSDSEDEDSGP----SKEECSKQFKEMLKERGIAPF 515

Query: 433 WTWEQAMREIINDKRYGALKTLGERKQAFHEYLGHRKKLDAEERRIRQKKAREEFIKMLD 492
             WE+ + +II D R+ A+ +   R+  F +Y+  R + +  E+R   K A E F ++LD
Sbjct: 516 SKWEKELPKIIFDPRFKAIPSHSVRRSLFEQYVKTRAEEERREKRAAHKAAIEGFRQLLD 575

Query: 493 E-SKELTSSTRWSKAVSMFENDERFKAVERSRDREDLFETCIVELERKEKERAAEEHKKN 552
           + S ++   T +      + ND RF+A+ER ++RE L    ++ L+R  +++A E     
Sbjct: 576 DASTDIDQHTDYRAFKKKWGNDLRFEAIER-KEREGLLNERVLSLKRSAEQKAQEIRAAA 635

Query: 553 ITEYREFLESCDYIKDYMRELEKEEEEQKKIQKGRLRRIERKNRDEFRQLMEEHITAGVL 612
            +++          K  +RE E          K  LR     N   +R +  E       
Sbjct: 636 ASDF----------KTMLREREISINSHWSKVKDSLR-----NEPRYRSVAHE------- 695

Query: 613 TAKTFWRDYCLKVKELPQYQAVASNISGSTPKDLFEDVLKELKTKYHKEKAQIKDV-MKA 672
             + F+ +Y  ++K     +     +     +D   +  +EL+ +  +E  +++ V  K 
Sbjct: 696 DREVFYYEYIAELK--AAQRGDDHEMKARDEEDKLRERERELRKRKEREVQEVERVRQKI 755

Query: 673 AKVTITSSWTFDDLKAVIEEGAPLALSDINFKDLLERAKAKE---------QKEAKRRQR 732
            +   +SS+       ++E+      S    K +LER   K           KE   R  
Sbjct: 756 RRKEASSSYQ----ALLVEKIRDPEASWTESKPILERDPQKRASNPDLEPADKEKLFRDH 815

Query: 733 LADDFSRLLQLFKEISASSNWEDSKQLFEESEDYR-SIGEETFAKEVFEEYVVHLQEKAK 780
           +   + R +  FK + A +   ++  L  ++ED + ++   + AK+V +  + + +   +
Sbjct: 816 VKSLYERCVHDFKALLAEALSSEAATL--QTEDGKTALNSWSTAKQVLKPDIRYSKMPRQ 834

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
B6EUA93.9e-21150.80Pre-mRNA-processing protein 40A OS=Arabidopsis thaliana OX=3702 GN=PRP40A PE=1 S... [more]
F4JCC12.2e-13439.29Pre-mRNA-processing protein 40B OS=Arabidopsis thaliana OX=3702 GN=PRP40B PE=1 S... [more]
O754004.0e-5929.74Pre-mRNA-processing factor 40 homolog A OS=Homo sapiens OX=9606 GN=PRPF40A PE=1 ... [more]
Q9R1C71.3e-5729.15Pre-mRNA-processing factor 40 homolog A OS=Mus musculus OX=10090 GN=Prpf40a PE=1... [more]
Q6NWY96.7e-3826.44Pre-mRNA-processing factor 40 homolog B OS=Homo sapiens OX=9606 GN=PRPF40B PE=1 ... [more]
Match NameE-valueIdentityDescription
XP_023524058.10.096.51pre-mRNA-processing protein 40A-like isoform X2 [Cucurbita pepo subsp. pepo][more]
XP_023524057.10.096.08pre-mRNA-processing protein 40A-like isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_022941011.10.094.17pre-mRNA-processing protein 40A-like [Cucurbita moschata][more]
KAG6608409.10.093.83Pre-mRNA-processing protein 40A, partial [Cucurbita argyrosperma subsp. sororia][more]
KAG7037749.10.093.30Pre-mRNA-processing protein 40A [Cucurbita argyrosperma subsp. argyrosperma][more]
Match NameE-valueIdentityDescription
A0A6J1FJZ00.094.17pre-mRNA-processing protein 40A-like OS=Cucurbita moschata OX=3662 GN=LOC1114464... [more]
A0A6J1J3150.093.39pre-mRNA-processing protein 40A-like OS=Cucurbita maxima OX=3661 GN=LOC111480826... [more]
A0A1S3BVK40.078.03pre-mRNA-processing protein 40A OS=Cucumis melo OX=3656 GN=LOC103493623 PE=4 SV=... [more]
A0A0A0L0K00.077.92Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G644700 PE=4 SV=1[more]
A0A6J1CJ950.076.90pre-mRNA-processing protein 40A OS=Momordica charantia OX=3673 GN=LOC111011666 P... [more]
Match NameE-valueIdentityDescription
AT1G44910.12.7e-21250.80pre-mRNA-processing protein 40A [more]
AT1G44910.22.7e-21250.80pre-mRNA-processing protein 40A [more]
AT3G19670.11.6e-13539.29pre-mRNA-processing protein 40B [more]
AT3G19840.17.4e-0823.55pre-mRNA-processing protein 40C [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 677..697
NoneNo IPR availableCOILSCoilCoilcoord: 537..565
NoneNo IPR availableCOILSCoilCoilcoord: 737..796
NoneNo IPR availableCOILSCoilCoilcoord: 615..642
NoneNo IPR availableCOILSCoilCoilcoord: 510..530
NoneNo IPR availableGENE3D2.20.70.10coord: 218..263
e-value: 2.6E-17
score: 63.9
NoneNo IPR availableGENE3D2.20.70.10coord: 156..217
e-value: 2.7E-12
score: 48.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 751..812
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 825..848
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..55
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 87..124
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 751..853
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 87..107
NoneNo IPR availablePANTHERPTHR11864:SF25PRE-MRNA-PROCESSING PROTEIN 40Bcoord: 10..538
coord: 538..858
IPR002713FF domainSMARTSM00441FF_2coord: 385..439
e-value: 7.3E-12
score: 55.4
coord: 563..624
e-value: 64.0
score: 1.0
coord: 691..746
e-value: 0.0055
score: 25.9
coord: 452..507
e-value: 3.3E-13
score: 59.9
IPR002713FF domainPFAMPF01846FFcoord: 387..436
e-value: 1.6E-14
score: 53.8
coord: 454..502
e-value: 5.1E-15
score: 55.4
coord: 565..620
e-value: 7.6E-5
score: 22.8
IPR002713FF domainPROSITEPS51676FFcoord: 452..507
score: 13.404065
IPR002713FF domainPROSITEPS51676FFcoord: 385..439
score: 10.830567
IPR002713FF domainPROSITEPS51676FFcoord: 561..624
score: 10.204095
IPR001202WW domainSMARTSM00456ww_5coord: 217..249
e-value: 1.8E-7
score: 40.8
coord: 176..208
e-value: 1.9E-7
score: 40.7
IPR001202WW domainPFAMPF00397WWcoord: 222..247
e-value: 2.9E-8
score: 33.6
coord: 178..206
e-value: 1.9E-8
score: 34.2
IPR001202WW domainPROSITEPS01159WW_DOMAIN_1coord: 181..206
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 175..208
score: 13.7721
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 216..249
score: 13.122001
IPR001202WW domainCDDcd00201WWcoord: 222..249
e-value: 1.37415E-9
score: 52.145
IPR001202WW domainCDDcd00201WWcoord: 178..208
e-value: 1.04499E-9
score: 52.5302
IPR036517FF domain superfamilyGENE3D1.10.10.440FF domaincoord: 542..635
e-value: 2.7E-10
score: 42.3
coord: 441..517
e-value: 1.9E-19
score: 71.7
IPR036517FF domain superfamilyGENE3D1.10.10.440FF domaincoord: 683..758
e-value: 1.5E-11
score: 45.9
IPR036517FF domain superfamilyGENE3D1.10.10.440FF domaincoord: 385..440
e-value: 2.4E-22
score: 80.6
IPR036517FF domain superfamilySUPERFAMILY81698FF domaincoord: 692..753
IPR036517FF domain superfamilySUPERFAMILY81698FF domaincoord: 444..514
IPR036517FF domain superfamilySUPERFAMILY81698FF domaincoord: 558..630
IPR036517FF domain superfamilySUPERFAMILY81698FF domaincoord: 377..438
IPR039726Pre-mRNA-processing factor Prp40PANTHERPTHR11864PRE-MRNA-PROCESSING PROTEIN PRP40coord: 10..538
coord: 538..858
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 180..214
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 209..250

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG02g06390.1Cp4.1LG02g06390.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045292 mRNA cis splicing, via spliceosome
cellular_component GO:0016592 mediator complex
cellular_component GO:0005685 U1 snRNP
cellular_component GO:0071004 U2-type prespliceosome
molecular_function GO:0005515 protein binding
molecular_function GO:0003723 RNA binding