Cp4.1LG02g05840 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG02g05840
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	17.1 kDa class II heat shock protein-like
Location	Cp4.1LG02: 1452296 .. 1452766 (-)
RNA-Seq Expression	Cp4.1LG02g05840
Synteny	Cp4.1LG02g05840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCTAAGAATCATGGGCTTAGACTCCCCAATCTTCTCCACCCTCCACCATGTTATGGATCTCGTCGACGAGGCCGACAAGTCGTTCAATGCCCCAACGCGAACCTACGTCCGGGATGCCAAGGCCATGGCAGCCACTCCGGCCGACATCAAGGAGTATCCAAATTCCTACGTTTTCGTCGTCGACATGCCAGGGCTGAAGGTTGGCGACATCAAGGTTCAGGTTGAGGACGACAATGTGCTACTGATAAGTGGCGAGAGGAAGAGGGAGGAGGAGAAAGAAGGGGCGAAGTATGTGAGGATGGAGAGGAGAGTTGGGAAGTTAATGAGGAAATTTGTGTTGCCGGAAAATGCCAACGTTGATGCCATCTCAGCGGTTTGTCAGGATGGTGTGCTCACTGTGACTGTCCAAAAGTTGCCACCACCTGAGCCCAAGAAGCCCAAGGTGGTTGAGGTCAAGGTCAATTGA

mRNA sequence

ATGGATCTAAGAATCATGGGCTTAGACTCCCCAATCTTCTCCACCCTCCACCATGTTATGGATCTCGTCGACGAGGCCGACAAGTCGTTCAATGCCCCAACGCGAACCTACGTCCGGGATGCCAAGGCCATGGCAGCCACTCCGGCCGACATCAAGGAGTATCCAAATTCCTACGTTTTCGTCGTCGACATGCCAGGGCTGAAGGTTGGCGACATCAAGGTTCAGGTTGAGGACGACAATGTGCTACTGATAAGTGGCGAGAGGAAGAGGGAGGAGGAGAAAGAAGGGGCGAAGTATGTGAGGATGGAGAGGAGAGTTGGGAAGTTAATGAGGAAATTTGTGTTGCCGGAAAATGCCAACGTTGATGCCATCTCAGCGGTTTGTCAGGATGGTGTGCTCACTGTGACTGTCCAAAAGTTGCCACCACCTGAGCCCAAGAAGCCCAAGGTGGTTGAGGTCAAGGTCAATTGA

Coding sequence (CDS)

ATGGATCTAAGAATCATGGGCTTAGACTCCCCAATCTTCTCCACCCTCCACCATGTTATGGATCTCGTCGACGAGGCCGACAAGTCGTTCAATGCCCCAACGCGAACCTACGTCCGGGATGCCAAGGCCATGGCAGCCACTCCGGCCGACATCAAGGAGTATCCAAATTCCTACGTTTTCGTCGTCGACATGCCAGGGCTGAAGGTTGGCGACATCAAGGTTCAGGTTGAGGACGACAATGTGCTACTGATAAGTGGCGAGAGGAAGAGGGAGGAGGAGAAAGAAGGGGCGAAGTATGTGAGGATGGAGAGGAGAGTTGGGAAGTTAATGAGGAAATTTGTGTTGCCGGAAAATGCCAACGTTGATGCCATCTCAGCGGTTTGTCAGGATGGTGTGCTCACTGTGACTGTCCAAAAGTTGCCACCACCTGAGCCCAAGAAGCCCAAGGTGGTTGAGGTCAAGGTCAATTGA

Protein sequence

MDLRIMGLDSPIFSTLHHVMDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENANVDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN

Homology

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BLAST of Cp4.1LG02g05840 vs. ExPASy Swiss-Prot
Match: P19242 (17.1 kDa class II heat shock protein OS=Pisum sativum OX=3888 GN=HSP17.7 PE=1 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 1.0e-65
Identity = 122/151 (80.79%), Postives = 141/151 (93.38%), Query Frame = 0


Query: 6   MGLDSPIFSTLHHVMDLVDE-ADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDM 65
           M LDSP+F+TLHH+MDL D+  +K+ NAPTRTYVRDAKAMAATPAD+KE+PNSYVF+VDM
Sbjct: 1   MDLDSPLFNTLHHIMDLTDDTTEKNLNAPTRTYVRDAKAMAATPADVKEHPNSYVFMVDM 60

Query: 66  PGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENANVDAI 125
           PG+K GDIKVQVED+NVLLISGERKREEEKEG KY++MERR+GKLMRKFVLPENAN++AI
Sbjct: 61  PGVKSGDIKVQVEDENVLLISGERKREEEKEGVKYLKMERRIGKLMRKFVLPENANIEAI 120

Query: 126 SAVCQDGVLTVTVQKLPPPEPKKPKVVEVKV 156
           SA+ QDGVLTVTV KLPPPEPKKPK ++VKV
Sbjct: 121 SAISQDGVLTVTVNKLPPPEPKKPKTIQVKV 151

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BLAST of Cp4.1LG02g05840 vs. ExPASy Swiss-Prot
Match: P05477 (17.9 kDa class II heat shock protein OS=Glycine max OX=3847 GN=HSP17.9-D PE=3 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 1.0e-65
Identity = 124/158 (78.48%), Postives = 143/158 (90.51%), Query Frame = 0


Query: 1   MDLRIMGLDSPIFSTLHHVMDLVDEA---DKSFNAPTRTYVRDAKAMAATPADIKEYPNS 60
           MD R+MGL+SP+F TL H+MD+ ++    +K+ NAPT +YVRDAKAMAATPAD+KEYPNS
Sbjct: 1   MDFRVMGLESPLFHTLQHMMDMSEDGAGDNKTHNAPTWSYVRDAKAMAATPADVKEYPNS 60

Query: 61  YVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPE 120
           YVF +DMPGLK GDIKVQVEDDN+LLI GERKR+EEKEGAKY+RMERRVGKLMRKFVLPE
Sbjct: 61  YVFEIDMPGLKSGDIKVQVEDDNLLLICGERKRDEEKEGAKYLRMERRVGKLMRKFVLPE 120

Query: 121 NANVDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKV 156
           NAN DAISAVCQDGVL+VTVQKLPPPEPKKP+ ++VKV
Sbjct: 121 NANTDAISAVCQDGVLSVTVQKLPPPEPKKPRTIQVKV 158

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BLAST of Cp4.1LG02g05840 vs. ExPASy Swiss-Prot
Match: O82013 (17.3 kDa class II heat shock protein OS=Solanum peruvianum OX=4082 PE=2 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 1.4e-65
Identity = 127/156 (81.41%), Postives = 141/156 (90.38%), Query Frame = 0


Query: 1   MDLRIMGLD-SPIFSTLHHVMDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYV 60
           MDLR++G+D +P+F TLHH+M+   E   S NAP++ YVRDAKAMAATPAD+KEYPNSYV
Sbjct: 1   MDLRLLGIDNTPLFHTLHHMMEAAGE--DSVNAPSKIYVRDAKAMAATPADVKEYPNSYV 60

Query: 61  FVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENA 120
           FVVDMPGLK GDIKVQVE+DNVLLISGERKREEEKEGAK++RMERRVGK MRKF LPENA
Sbjct: 61  FVVDMPGLKSGDIKVQVEEDNVLLISGERKREEEKEGAKFIRMERRVGKFMRKFSLPENA 120

Query: 121 NVDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKV 156
           N DAISAVCQDGVLTVTVQKLPPPEPKKPK +EVKV
Sbjct: 121 NTDAISAVCQDGVLTVTVQKLPPPEPKKPKTIEVKV 154

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BLAST of Cp4.1LG02g05840 vs. ExPASy Swiss-Prot
Match: Q01544 (17.2 kDa class II heat shock protein OS=Ipomoea nil OX=35883 GN=SHSP-1 PE=2 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 3.3e-59
Identity = 116/157 (73.89%), Postives = 136/157 (86.62%), Query Frame = 0


Query: 1   MDLRIMGLDSPIFSTLHHVMDLV-DEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYV 60
           MDLR+MG D P+F   HH+MD   D+   + +AP+RT++ DAKAMAATPAD+KEYPNSYV
Sbjct: 1   MDLRLMGFDHPLF---HHIMDYAGDDKSSNSSAPSRTFMLDAKAMAATPADVKEYPNSYV 60

Query: 61  FVVDMPGLKVGDIKVQVEDDNVLLISGERKRE-EEKEGAKYVRMERRVGKLMRKFVLPEN 120
           F++DMPGLK GDIKVQV+ DNVL ISGERKRE EEKEGAKYVRMERRVGKLMRKFVLPEN
Sbjct: 61  FIIDMPGLKSGDIKVQVDGDNVLSISGERKREAEEKEGAKYVRMERRVGKLMRKFVLPEN 120

Query: 121 ANVDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKV 156
           AN + I+AVCQDGVLTVTV+ +PPPEPKKP+ +EVK+
Sbjct: 121 ANKEKITAVCQDGVLTVTVENVPPPEPKKPRTIEVKI 154

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BLAST of Cp4.1LG02g05840 vs. ExPASy Swiss-Prot
Match: P46516 (17.9 kDa class II heat shock protein OS=Helianthus annuus OX=4232 GN=HSP17.9 PE=2 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.4e-54
Identity = 108/155 (69.68%), Postives = 131/155 (84.52%), Query Frame = 0


Query: 5   IMGLDSPIFSTLHHVMDLVDE---ADKSFNA-PTRTYVRDAKAMAATPADIKEYPNSYVF 64
           +MG D P+   LH++++  D+    +KS N+ P+R YVRDA+AMAATPAD+KE PNSYVF
Sbjct: 6   LMGFD-PLLRNLHYILEATDDNTTGNKSNNSGPSRAYVRDARAMAATPADVKECPNSYVF 65

Query: 65  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 124
           +VDMPGLK GDIKVQVE DNVL+ISG+R REEEKEG KYVRMERR+GK M+KF LPE+AN
Sbjct: 66  IVDMPGLKSGDIKVQVERDNVLVISGKRNREEEKEGVKYVRMERRMGKFMKKFALPEDAN 125

Query: 125 VDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKV 156
            D ISA+CQDGVLTVTV+KLPPPEPKKPK ++V+V
Sbjct: 126 TDKISAICQDGVLTVTVEKLPPPEPKKPKTIQVQV 159

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BLAST of Cp4.1LG02g05840 vs. NCBI nr
Match: XP_022941229.1 (17.1 kDa class II heat shock protein-like [Cucurbita moschata] >XP_023524413.1 17.1 kDa class II heat shock protein-like [Cucurbita pepo subsp. pepo] >KAG6608349.1 17.9 kDa class II heat shock protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 301 bits (770), Expect = 1.01e-102
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MDLRIMGLDSPIFSTLHHVMDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVF 60
           MDLRIMGLDSPIFSTLHHVMDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVF
Sbjct: 1   MDLRIMGLDSPIFSTLHHVMDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN
Sbjct: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 120

Query: 121 VDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN 156
           VDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN
Sbjct: 121 VDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN 156

[Close]

BLAST of Cp4.1LG02g05840 vs. NCBI nr
Match: XP_022982420.1 (17.1 kDa class II heat shock protein-like [Cucurbita maxima])

HSP 1 Score: 298 bits (764), Expect = 8.27e-102
Identity = 154/156 (98.72%), Postives = 155/156 (99.36%), Query Frame = 0


Query: 1   MDLRIMGLDSPIFSTLHHVMDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVF 60
           MDLRIMGLDSPIFSTLHHVMDLVDEADKSFNAPTRTYVRDA AMAATPADIKEYPNSYVF
Sbjct: 1   MDLRIMGLDSPIFSTLHHVMDLVDEADKSFNAPTRTYVRDANAMAATPADIKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN
Sbjct: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 120

Query: 121 VDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN 156
           +DAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN
Sbjct: 121 IDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN 156

[Close]

BLAST of Cp4.1LG02g05840 vs. NCBI nr
Match: ADU55791.1 (HSP17.4 [Citrullus lanatus])

HSP 1 Score: 292 bits (747), Expect = 3.23e-99
Identity = 150/156 (96.15%), Postives = 153/156 (98.08%), Query Frame = 0


Query: 1   MDLRIMGLDSPIFSTLHHVMDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVF 60
           MDLRIMGLDSPIFSTL HVMDL DEADKSF+APTRTYVRDAKAMAATPAD+KEYPNSYVF
Sbjct: 1   MDLRIMGLDSPIFSTLQHVMDLADEADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN
Sbjct: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 120

Query: 121 VDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN 156
            DAISAVCQDGVLTVTVQKLPPPEPKKPK+VEVKVN
Sbjct: 121 TDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN 156

[Close]

BLAST of Cp4.1LG02g05840 vs. NCBI nr
Match: XP_038898182.1 (17.9 kDa class II heat shock protein-like [Benincasa hispida])

HSP 1 Score: 288 bits (736), Expect = 1.54e-97
Identity = 148/156 (94.87%), Postives = 152/156 (97.44%), Query Frame = 0


Query: 1   MDLRIMGLDSPIFSTLHHVMDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVF 60
           MDLRIMGLDSPIFSTL HVMDL DEADKSF+APTRTYVRDAKAMAATPAD+KEY NSYVF
Sbjct: 1   MDLRIMGLDSPIFSTLQHVMDLADEADKSFSAPTRTYVRDAKAMAATPADVKEYTNSYVF 60

Query: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLP+NAN
Sbjct: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPDNAN 120

Query: 121 VDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN 156
            DAISAVCQDGVLTVTVQKLPPPEPKKPK+VEVKVN
Sbjct: 121 TDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN 156

[Close]

BLAST of Cp4.1LG02g05840 vs. NCBI nr
Match: XP_022936723.1 (17.3 kDa class II heat shock protein-like [Cucurbita moschata] >XP_022977130.1 17.3 kDa class II heat shock protein-like [Cucurbita maxima])

HSP 1 Score: 283 bits (725), Expect = 7.32e-96
Identity = 142/156 (91.03%), Postives = 151/156 (96.79%), Query Frame = 0


Query: 1   MDLRIMGLDSPIFSTLHHVMDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVF 60
           MDLR+MGLDSP+FSTL HVMD  D+ADKSF+APTRTYVRDAKAMAATPAD+KEYPNSYVF
Sbjct: 1   MDLRVMGLDSPLFSTLQHVMDFADDADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLKVGDIKVQVE+DNVLL+SGERKREEEKEGAKYVRMERRVGK MRKFVLPENAN
Sbjct: 61  VVDMPGLKVGDIKVQVEEDNVLLVSGERKREEEKEGAKYVRMERRVGKFMRKFVLPENAN 120

Query: 121 VDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN 156
            DAI+AVCQDGVLTVTVQKLPPPEPKKPK+VEVKVN
Sbjct: 121 TDAITAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN 156

[Close]

BLAST of Cp4.1LG02g05840 vs. ExPASy TrEMBL
Match: A0A6J1FMP1 (17.1 kDa class II heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111446600 PE=3 SV=1)

HSP 1 Score: 301 bits (770), Expect = 4.87e-103
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MDLRIMGLDSPIFSTLHHVMDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVF 60
           MDLRIMGLDSPIFSTLHHVMDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVF
Sbjct: 1   MDLRIMGLDSPIFSTLHHVMDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN
Sbjct: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 120

Query: 121 VDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN 156
           VDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN
Sbjct: 121 VDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN 156

[Close]

BLAST of Cp4.1LG02g05840 vs. ExPASy TrEMBL
Match: A0A6J1J2L5 (17.1 kDa class II heat shock protein-like OS=Cucurbita maxima OX=3661 GN=LOC111481249 PE=3 SV=1)

HSP 1 Score: 298 bits (764), Expect = 4.00e-102
Identity = 154/156 (98.72%), Postives = 155/156 (99.36%), Query Frame = 0


Query: 1   MDLRIMGLDSPIFSTLHHVMDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVF 60
           MDLRIMGLDSPIFSTLHHVMDLVDEADKSFNAPTRTYVRDA AMAATPADIKEYPNSYVF
Sbjct: 1   MDLRIMGLDSPIFSTLHHVMDLVDEADKSFNAPTRTYVRDANAMAATPADIKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN
Sbjct: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 120

Query: 121 VDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN 156
           +DAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN
Sbjct: 121 IDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN 156

[Close]

BLAST of Cp4.1LG02g05840 vs. ExPASy TrEMBL
Match: H6TB44 (HSP17.4 OS=Citrullus lanatus OX=3654 PE=2 SV=1)

HSP 1 Score: 292 bits (747), Expect = 1.57e-99
Identity = 150/156 (96.15%), Postives = 153/156 (98.08%), Query Frame = 0


Query: 1   MDLRIMGLDSPIFSTLHHVMDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVF 60
           MDLRIMGLDSPIFSTL HVMDL DEADKSF+APTRTYVRDAKAMAATPAD+KEYPNSYVF
Sbjct: 1   MDLRIMGLDSPIFSTLQHVMDLADEADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN
Sbjct: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 120

Query: 121 VDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN 156
            DAISAVCQDGVLTVTVQKLPPPEPKKPK+VEVKVN
Sbjct: 121 TDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN 156

[Close]

BLAST of Cp4.1LG02g05840 vs. ExPASy TrEMBL
Match: A0A6J1ILE9 (17.3 kDa class II heat shock protein-like OS=Cucurbita maxima OX=3661 GN=LOC111477291 PE=3 SV=1)

HSP 1 Score: 283 bits (725), Expect = 3.54e-96
Identity = 142/156 (91.03%), Postives = 151/156 (96.79%), Query Frame = 0


Query: 1   MDLRIMGLDSPIFSTLHHVMDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVF 60
           MDLR+MGLDSP+FSTL HVMD  D+ADKSF+APTRTYVRDAKAMAATPAD+KEYPNSYVF
Sbjct: 1   MDLRVMGLDSPLFSTLQHVMDFADDADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLKVGDIKVQVE+DNVLL+SGERKREEEKEGAKYVRMERRVGK MRKFVLPENAN
Sbjct: 61  VVDMPGLKVGDIKVQVEEDNVLLVSGERKREEEKEGAKYVRMERRVGKFMRKFVLPENAN 120

Query: 121 VDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN 156
            DAI+AVCQDGVLTVTVQKLPPPEPKKPK+VEVKVN
Sbjct: 121 TDAITAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN 156

[Close]

BLAST of Cp4.1LG02g05840 vs. ExPASy TrEMBL
Match: A0A6J1FE17 (17.3 kDa class II heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111443230 PE=3 SV=1)

HSP 1 Score: 283 bits (725), Expect = 3.54e-96
Identity = 142/156 (91.03%), Postives = 151/156 (96.79%), Query Frame = 0


Query: 1   MDLRIMGLDSPIFSTLHHVMDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVF 60
           MDLR+MGLDSP+FSTL HVMD  D+ADKSF+APTRTYVRDAKAMAATPAD+KEYPNSYVF
Sbjct: 1   MDLRVMGLDSPLFSTLQHVMDFADDADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 120
           VVDMPGLKVGDIKVQVE+DNVLL+SGERKREEEKEGAKYVRMERRVGK MRKFVLPENAN
Sbjct: 61  VVDMPGLKVGDIKVQVEEDNVLLVSGERKREEEKEGAKYVRMERRVGKFMRKFVLPENAN 120

Query: 121 VDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN 156
            DAI+AVCQDGVLTVTVQKLPPPEPKKPK+VEVKVN
Sbjct: 121 TDAITAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN 156

[Close]

BLAST of Cp4.1LG02g05840 vs. TAIR 10
Match: AT5G12020.1 (17.6 kDa class II heat shock protein )

HSP 1 Score: 193.0 bits (489), Expect = 1.8e-49
Identity = 98/148 (66.22%), Postives = 124/148 (83.78%), Query Frame = 0


Query: 11  PIFSTLHHVMDLVDE--ADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLK 70
           PI S L  ++++ ++   +K+ N P+R Y+RDAKAMAATPAD+ E+PN+Y FVVDMPG+K
Sbjct: 7   PIISILEDMLEVPEDHNNEKTRNNPSRVYMRDAKAMAATPADVIEHPNAYAFVVDMPGIK 66

Query: 71  VGDIKVQVEDDNVLLISGERKRE-EEKEGAKYVRMERRVGKLMRKFVLPENANVDAISAV 130
             +IKVQVE+DNVL++SGER+RE +E EG KYVRMERR+GK MRKF LPENA++D ISAV
Sbjct: 67  GDEIKVQVENDNVLVVSGERQRENKENEGVKYVRMERRMGKFMRKFQLPENADLDKISAV 126

Query: 131 CQDGVLTVTVQKLPPPEPKKPKVVEVKV 156
           C DGVL VTVQKLPPPEPKKPK ++V+V
Sbjct: 127 CHDGVLKVTVQKLPPPEPKKPKTIQVQV 154

[Close]

BLAST of Cp4.1LG02g05840 vs. TAIR 10
Match: AT5G12030.1 (heat shock protein 17.6A )

HSP 1 Score: 180.3 bits (456), Expect = 1.2e-45
Identity = 88/147 (59.86%), Postives = 122/147 (82.99%), Query Frame = 0


Query: 11  PIFSTLHHVMDLVDE-ADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKV 70
           PIFS L  +++  +E  +K+ N P+R Y+RDAKAMAATPAD+ E+P++YVF VDMPG+K 
Sbjct: 9   PIFSILEDMLEAPEEQTEKTRNNPSRAYMRDAKAMAATPADVIEHPDAYVFAVDMPGIKG 68

Query: 71  GDIKVQVEDDNVLLISGERKRE-EEKEGAKYVRMERRVGKLMRKFVLPENANVDAISAVC 130
            +I+VQ+E++NVL++SG+R+R+ +E EG K+VRMERR+GK MRKF LP+NA+++ ISA C
Sbjct: 69  DEIQVQIENENVLVVSGKRQRDNKENEGVKFVRMERRMGKFMRKFQLPDNADLEKISAAC 128

Query: 131 QDGVLTVTVQKLPPPEPKKPKVVEVKV 156
            DGVL VT+ KLPPPEPKKPK ++V+V
Sbjct: 129 NDGVLKVTIPKLPPPEPKKPKTIQVQV 155

[Close]

BLAST of Cp4.1LG02g05840 vs. TAIR 10
Match: AT5G59720.1 (heat shock protein 18.2 )

HSP 1 Score: 104.0 bits (258), Expect = 1.1e-22
Identity = 56/118 (47.46%), Postives = 77/118 (65.25%), Query Frame = 0


Query: 39  RDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAK 98
           RD  A      D KE P ++VF  D+PGLK  ++KV+VED NVL ISGER +E E++  K
Sbjct: 44  RDVAAFTNARVDWKETPEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDK 103

Query: 99  YVRMERRVGKLMRKFVLPENANVDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN 157
           + R+ER  GK MR+F LPENA ++ + A  ++GVLTV V K P    KKP+V  + ++
Sbjct: 104 WHRVERASGKFMRRFRLPENAKMEEVKATMENGVLTVVVPKAP---EKKPQVKSIDIS 158

[Close]

BLAST of Cp4.1LG02g05840 vs. TAIR 10
Match: AT1G54050.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 101.3 bits (251), Expect = 7.3e-22
Identity = 54/114 (47.37%), Postives = 86/114 (75.44%), Query Frame = 0


Query: 48  PADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLI--SGERKR--EEEKEGAKYVRME 107
           P DI E P  Y+F +D+PG+   DI+V VE++  L+I  +G+RKR  +E +EG+KY+R+E
Sbjct: 43  PIDILESPKEYIFYLDIPGISKSDIQVTVEEERTLVIKSNGKRKRDDDESEEGSKYIRLE 102

Query: 108 RRVGK-LMRKFVLPENANVDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN 157
           RR+ + L++KF LPE+A++ +++A  Q+GVLTV ++KL PP+P KPK V++ V+
Sbjct: 103 RRLAQNLVKKFRLPEDADMASVTAKYQEGVLTVVIKKL-PPQPPKPKTVQIAVS 155

[Close]

BLAST of Cp4.1LG02g05840 vs. TAIR 10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 98.2 bits (243), Expect = 6.2e-21
Identity = 55/126 (43.65%), Postives = 79/126 (62.70%), Query Frame = 0


Query: 31  NAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKR 90
           NAP      D  A      D +E P ++VF  D+PGL+  ++KV+VED N+L ISGER  
Sbjct: 38  NAP----AMDVAAFTNAKVDWRETPEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSN 97

Query: 91  EEEKEGAKYVRMERRVGKLMRKFVLPENANVDAISAVCQDGVLTVTVQKLPPPEPKKPKV 150
           E E++  K+ R+ER  GK  R+F LPENA ++ I A  ++GVL+VTV K+P    KKP+V
Sbjct: 98  ENEEKNDKWHRVERSSGKFTRRFRLPENAKMEEIKASMENGVLSVTVPKVP---EKKPEV 156

Query: 151 VEVKVN 157
             + ++
Sbjct: 158 KSIDIS 156

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g05840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P19242	1.0e-65	80.79	17.1 kDa class II heat shock protein OS=Pisum sativum OX=3888 GN=HSP17.7 PE=1 SV...	[more]
P05477	1.0e-65	78.48	17.9 kDa class II heat shock protein OS=Glycine max OX=3847 GN=HSP17.9-D PE=3 SV...	[more]
O82013	1.4e-65	81.41	17.3 kDa class II heat shock protein OS=Solanum peruvianum OX=4082 PE=2 SV=1	[more]
Q01544	3.3e-59	73.89	17.2 kDa class II heat shock protein OS=Ipomoea nil OX=35883 GN=SHSP-1 PE=2 SV=1	[more]
P46516	1.4e-54	69.68	17.9 kDa class II heat shock protein OS=Helianthus annuus OX=4232 GN=HSP17.9 PE=...	[more]

BLAST of Cp4.1LG02g05840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022941229.1	1.01e-102	100.00	17.1 kDa class II heat shock protein-like [Cucurbita moschata] >XP_023524413.1 1...	[more]
XP_022982420.1	8.27e-102	98.72	17.1 kDa class II heat shock protein-like [Cucurbita maxima]	[more]
ADU55791.1	3.23e-99	96.15	HSP17.4 [Citrullus lanatus]	[more]
XP_038898182.1	1.54e-97	94.87	17.9 kDa class II heat shock protein-like [Benincasa hispida]	[more]
XP_022936723.1	7.32e-96	91.03	17.3 kDa class II heat shock protein-like [Cucurbita moschata] >XP_022977130.1 1...	[more]

BLAST of Cp4.1LG02g05840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FMP1	4.87e-103	100.00	17.1 kDa class II heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1J2L5	4.00e-102	98.72	17.1 kDa class II heat shock protein-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
H6TB44	1.57e-99	96.15	HSP17.4 OS=Citrullus lanatus OX=3654 PE=2 SV=1	[more]
A0A6J1ILE9	3.54e-96	91.03	17.3 kDa class II heat shock protein-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1FE17	3.54e-96	91.03	17.3 kDa class II heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]

BLAST of Cp4.1LG02g05840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G12020.1	1.8e-49	66.22	17.6 kDa class II heat shock protein	[more]
AT5G12030.1	1.2e-45	59.86	heat shock protein 17.6A	[more]
AT5G59720.1	1.1e-22	47.46	heat shock protein 18.2	[more]
AT1G54050.1	7.3e-22	47.37	HSP20-like chaperones superfamily protein	[more]
AT1G53540.1	6.2e-21	43.65	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 50..153 e-value: 6.5E-29 score: 100.1
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 40..156 score: 28.635773
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 8..155 e-value: 8.9E-40 score: 137.8
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 14..150
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	HEAT-SHOCK PROTEIN 20 FAMILY MEMBER	coord: 8..155
None	No IPR available	PANTHER	PTHR11527:SF260	18.0 KDA CLASS II HEAT SHOCK PROTEIN	coord: 8..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG02g05840.1	Cp4.1LG02g05840.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051259	protein complex oligomerization
biological_process	GO:0006457	protein folding
biological_process	GO:0009408	response to heat
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0009651	response to salt stress
molecular_function	GO:0043621	protein self-association
molecular_function	GO:0051082	unfolded protein binding