Cp4.1LG02g05490 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTAACAAATGGGGCGCAAAGAAATTATTGAGTCAACTCAATTCCATTATCGGTCAATCGATATCAGATTAGAAATCATAAATTCCTTGAAATTATTGAGACCCAATTCTTCATTATCAAAGCCGACGATGCCATTGAATTCTTTAATGAAGCTTTGAGAAATCTCGTGAATCGCAGACCAATCCAACACGCCATTAATATTCTCACTCTCTGCAATTCGAGAAGCCTTTCAGTTTCTTCTCTGTCACTTTGTAATCGAATTTAATATCCTCTCTGCCCCTTTACTGATTCGAAGTAATCACATTCGCTTATGAGTTCACTCTTTAAATCCCACGAAGTTTCAGATTCCTGCAATTCAACGGGGCGTCTCTTGCGTGTGGTTGATATTCTCCGGGAAGAAGACGGCGACGGCGACGGTTTTTTCGGCGATTTTGGAATGTCTGATGCTGGAGAGCGTCTGGCGGATGAGTCGGTGACCGTTCATTGTTTGTCACCACGACGGATTGTTGCTCGGTGGGTGGCTTCGTTCCGGCGACCGAAGCGGAGGAGAGCGGCGACGGAGGTTAAGAGAGAGAAAGAAAGTGGAGATTCCGATGATCGGTTGATGTGTAGTAGGTGCGCGAGGAATGGAGTTGACAGCGGTGCTTCGTCGTCTTCAGCGACGGAGATTGCAGGGCCTGGTGAGTGAGTATGATTGAATTGATCTGTGATATTGCGATTTTAAGCGATTGAATGTTCTTTGTTATATCGAAACTATTTCGAATTTGCAATGCTACTGTATTTCATCGATGTTTAATTGGATTGATTGAAACTATAATCAAAACGATTAGGATCTGAAGAAATGGTAATTGTGTAATGCCGAATCAGAGAAAACTGTATGCGGACGTTGAAATTTAAGAAGTCCAACAATCTGGAATAGTTATAGAATTCATAAGATCTCAAAAACTAAGATCAAGTGGCTGTATGTTCATCCATAAACACGAACATTCTTATATCCAATAGGTAAGATTTGTAAGAAAAGAACTAAGATCAATTGACTTTAAATGTCGAATTTCTTAAGAGTTTGAACTTTCTACATCTCAATTTCATGGATGTTTTCTCCAATGTTTCAATTTTGATTGTGTTCTTAAAATTCACAGGACTGAGTAGGAAAGAAGATACCTCATTCAACTTGGGAGTTGGGTGTAGTTTGTTGTATCTTGTTCTTGCGAGTAAAAATGAACTCTCGAAGATGGTAGATTTGCGGAGACAAATGGAACTATTTCTTCAAGATATCAAAGAAGAGATGGGAAGAAAGAACAATCCGTTTGAGCCATTCCACTTGAATACAGATATGGCGTGTTCTTCCACTGATTGCCAAGACGGTCCTTGCTCGACCAGCCAGCGTTCATATCAACAAGATTTTTCATCTCAAATTTTGTCTGATGCACAATCAAATATACCAAATTATCACCAGAAGTCATGTCTGCATGAACAAGGGGAACGTCAGGAACGGATCGACGAACTGGAATCTGAGTTCGAGGCCGAGTTGGAACGCTTGCAGCTCCATTTGGAAGTTGAAAGTTCTTCTGGACGGATAGAGCAGCTAAAAATTGAGGTACATGGGAACATACTAAAACTTCTAGATTACTTTTGCTTTTTAAGTTTGATTTGATGGAAATGAAACTGGTTGGTTTGGAAATGCTCACTCTTATAGTTGTTGCAGTCTTCACATGATTGAGAATATCTTTACTGGTTTTCCAAATGTCTTGGTTTGATCACATTACTTATGACAAGAAACATCTTAGATCTATGGGAGTCGATGATCACACGTCCTACATGAAAGTTCAAAAATTAATAGTGGGTGATTTTCTAACCTCCGAACATTCGTTCCGTAATAGCTCAAGTTCACCGTTGGTAGATATTGTTCTTTTGGACTTTCTCTTTCGAGCTTTCCCTCAAGGTTTTTAAAACGCGTCTGTTAGGGAGAGGTTTCCATACCCTTATGAAGGATGTTTCGTTTTCTTCCCTCACCGATGTGAGATCGCACAATCCACCCCCTTTCAGGACCCAACGTTCTCGCGGACACTTGTTCCATTCTTCAATCGATGTAGGACCCCCCAATCCACCCCTTCGGGGCTCAGCGTCCTTGCTGGCACGCCACCTCGTGTCCACTCCCATTCGGGGCTTAGCCTCCTCGCGGGCACATCGCTCAATGTCTAGCTCTAATACCATTTATAATAGCCCAAGCCCATCTCTAACAGATATTGTCCTCTTTAGTCTTTTCCCTTTCGTGCTTCTCCTCAAGGTTATTAAAAAGCGTATGCTAGGGAGAGGTTTCTACACTCTTATAAAAGATGTTTCGTTCTCCTCTCCAAACGACGTGGGATCTCACCATTCTCTAATTTCATGGAGTAGAATAATTCGTAATGAGATCTGAAGGGATGAATATCTGTGTTCTGCTGAATATTCTGTTCTTGATTGCAAGTTTTATAAAACTGGGTTATATGTGAAATGACAGAATGCAAAGAACACGGACTCTACTAGAAGTTGCTGTATTAGTTCTGGTGAAGTCATTGATCTCCAAGAAGATGGCACTAACAGGCAACATGGAGTTCCTCCTGTAGAACTCGAAAGAAAGTTGCACGAGCTGCTCAAAGCTAGACAGGAAGAACGAATAAAAGAACTTGAAGGCGCTTTAGAATGTGTCAAGCAGGAAGTTATTGAGAAAGAATCTGAGGTTTCTTGGTGGAAGGAAACTGCAAAAGTCATTTCTAAGCACATTCCAGCTCATTCACGACTTAAACTTGCTTCTCAACATGATCAGCTTCAGCAACTTCGGTAAGCATCCTTCTACACTTTACAATAGGCTTTAAGAAAGACTTATTTAAATGATAACTGATGCTTTAGATACAAGCCAATCAAGTCTTTGTGATATGCTTTCTAGGGGAAATTTCCTTTGTTTACTTTATGGTGAGGAGTATTCGTACTCTCATAGTTGTACCAGAAGGAGTGTTGTTCCAAATTTATGCTTGACTACATGAACTTTTTGGATAAATATCTTTGAGCAACGTTTTTGTGATCAAAATCTTCGTGTCTGTGCTTCCTCGTAAATGCAATTACACCACGTTTGTTTGTCAAGGATGTTACGTTATTTTGAGAAACCACTGTTAAGGACATTGAGAGGTGTCGTCCTACCTTGGCTACTTAAGAGAAATATCATAGGTTTATAAGTATGAAACAATATTTCCATTAGTATGAAGTATTTTTGGGAAACTAAAAGTAAAGCCATGAGAGTTTATGCTCAAAGTGGATAATATCATACAATTGTGAAGATCTGTGATTCTCAACCACCCTCCTCTTGACTAACTAAGAGGAAGATCATAGGTTTATACGGAAGACTATCTCTATTGGTATGAAGCCTTTTGGGAAACTTTACAAAGTCACGAGAGTTTATATTCAATTTGGACCATATATTATTCTTGAGATCCGTGATTCTTATCAACTCCTTTTAAATTACTAGCGGGATTCAAATCAAATCTACCGGAGTGAAAATGAAATCTGAAATAAGATCTATTGGATGATGTTTGAATTATGTTCATTTAACCAAAAATGACAGGTTCCAATAATGATGAAAAGGATGCAAAACATGCCGAAAGCAGCAGCTCTGTGGCTTACTTTATTTTGAAGATGCGCACCAACGACGAACAGAGTTGAAGAACAGTCCCATTCAAACATCACATCATATTCTTTCTTATCTGAACTTGGTAGAGTGTCCCATTTCAAATTCTCTTGCTTATTATATTTTGACAAATCCCTCCATGAGTCTGAATTATTTTGAATTTGTTTTTTGTCACGTTTCAATGAAAATCGATCTAATTAGTCGTTGAAATATAATATTTGGAGAATATATTATAATAATTAATTAGTTATGAAATATATATTAGATATTATATCTTAATATTTTTTCCCGTATGATTTGATTAGTAGTATGT TGTAACAAATGGGGCGCAAAGAAATTATTGAGTCAACTCAATTCCATTATCGGTCAATCGATATCAGATTAGAAATCATAAATTCCTTGAAATTATTGAGACCCAATTCTTCATTATCAAAGCCGACGATGCCATTGAATTCTTTAATGAAGCTTTGAGAAATCTCGTGAATCGCAGACCAATCCAACACGCCATTAATATTCTCACTCTCTGCAATTCGAGAAGCCTTTCAGTTTCTTCTCTGTCACTTTGTAATCGAATTTAATATCCTCTCTGCCCCTTTACTGATTCGAAGTAATCACATTCGCTTATGAGTTCACTCTTTAAATCCCACGAAGTTTCAGATTCCTGCAATTCAACGGGGCGTCTCTTGCGTGTGGTTGATATTCTCCGGGAAGAAGACGGCGACGGCGACGGTTTTTTCGGCGATTTTGGAATGTCTGATGCTGGAGAGCGTCTGGCGGATGAGTCGGTGACCGTTCATTGTTTGTCACCACGACGGATTGTTGCTCGGTGGGTGGCTTCGTTCCGGCGACCGAAGCGGAGGAGAGCGGCGACGGAGGTTAAGAGAGAGAAAGAAAGTGGAGATTCCGATGATCGGTTGATGTGTAGTAGGTGCGCGAGGAATGGAGTTGACAGCGGTGCTTCGTCGTCTTCAGCGACGGAGATTGCAGGGCCTGGACTGAGTAGGAAAGAAGATACCTCATTCAACTTGGGAGTTGGGTGTAGTTTGTTGTATCTTGTTCTTGCGAGTAAAAATGAACTCTCGAAGATGGTAGATTTGCGGAGACAAATGGAACTATTTCTTCAAGATATCAAAGAAGAGATGGGAAGAAAGAACAATCCGTTTGAGCCATTCCACTTGAATACAGATATGGCGTGTTCTTCCACTGATTGCCAAGACGGTCCTTGCTCGACCAGCCAGCGTTCATATCAACAAGATTTTTCATCTCAAATTTTGTCTGATGCACAATCAAATATACCAAATTATCACCAGAAGTCATGTCTGCATGAACAAGGGGAACGTCAGGAACGGATCGACGAACTGGAATCTGAGTTCGAGGCCGAGTTGGAACGCTTGCAGCTCCATTTGGAAGTTGAAAGTTCTTCTGGACGGATAGAGCAGCTAAAAATTGAGAATGCAAAGAACACGGACTCTACTAGAAGTTGCTGTATTAGTTCTGGTGAAGTCATTGATCTCCAAGAAGATGGCACTAACAGGCAACATGGAGTTCCTCCTGTAGAACTCGAAAGAAAGTTGCACGAGCTGCTCAAAGCTAGACAGGAAGAACGAATAAAAGAACTTGAAGGCGCTTTAGAATGTGTCAAGCAGGAAGTTATTGAGAAAGAATCTGAGGTTTCTTGGTGGAAGGAAACTGCAAAAGTCATTTCTAAGCACATTCCAGCTCATTCACGACTTAAACTTGCTTCTCAACATGATCAGCTTCAGCAACTTCGGGGAAATTTCCTTTGTTTACTTTATGGTTCCAATAATGATGAAAAGGATGCAAAACATGCCGAAAGCAGCAGCTCTGTGGCTTACTTTATTTTGAAGATGCGCACCAACGACGAACAGAGTTGAAGAACAGTCCCATTCAAACATCACATCATATTCTTTCTTATCTGAACTTGGTAGAGTGTCCCATTTCAAATTCTCTTGCTTATTATATTTTGACAAATCCCTCCATGAGTCTGAATTATTTTGAATTTGTTTTTTGTCACGTTTCAATGAAAATCGATCTAATTAGTCGTTGAAATATAATATTTGGAGAATATATTATAATAATTAATTAGTTATGAAATATATATTAGATATTATATCTTAATATTTTTTCCCGTATGATTTGATTAGTAGTATGT ATGAGTTCACTCTTTAAATCCCACGAAGTTTCAGATTCCTGCAATTCAACGGGGCGTCTCTTGCGTGTGGTTGATATTCTCCGGGAAGAAGACGGCGACGGCGACGGTTTTTTCGGCGATTTTGGAATGTCTGATGCTGGAGAGCGTCTGGCGGATGAGTCGGTGACCGTTCATTGTTTGTCACCACGACGGATTGTTGCTCGGTGGGTGGCTTCGTTCCGGCGACCGAAGCGGAGGAGAGCGGCGACGGAGGTTAAGAGAGAGAAAGAAAGTGGAGATTCCGATGATCGGTTGATGTGTAGTAGGTGCGCGAGGAATGGAGTTGACAGCGGTGCTTCGTCGTCTTCAGCGACGGAGATTGCAGGGCCTGGACTGAGTAGGAAAGAAGATACCTCATTCAACTTGGGAGTTGGGTGTAGTTTGTTGTATCTTGTTCTTGCGAGTAAAAATGAACTCTCGAAGATGGTAGATTTGCGGAGACAAATGGAACTATTTCTTCAAGATATCAAAGAAGAGATGGGAAGAAAGAACAATCCGTTTGAGCCATTCCACTTGAATACAGATATGGCGTGTTCTTCCACTGATTGCCAAGACGGTCCTTGCTCGACCAGCCAGCGTTCATATCAACAAGATTTTTCATCTCAAATTTTGTCTGATGCACAATCAAATATACCAAATTATCACCAGAAGTCATGTCTGCATGAACAAGGGGAACGTCAGGAACGGATCGACGAACTGGAATCTGAGTTCGAGGCCGAGTTGGAACGCTTGCAGCTCCATTTGGAAGTTGAAAGTTCTTCTGGACGGATAGAGCAGCTAAAAATTGAGAATGCAAAGAACACGGACTCTACTAGAAGTTGCTGTATTAGTTCTGGTGAAGTCATTGATCTCCAAGAAGATGGCACTAACAGGCAACATGGAGTTCCTCCTGTAGAACTCGAAAGAAAGTTGCACGAGCTGCTCAAAGCTAGACAGGAAGAACGAATAAAAGAACTTGAAGGCGCTTTAGAATGTGTCAAGCAGGAAGTTATTGAGAAAGAATCTGAGGTTTCTTGGTGGAAGGAAACTGCAAAAGTCATTTCTAAGCACATTCCAGCTCATTCACGACTTAAACTTGCTTCTCAACATGATCAGCTTCAGCAACTTCGGGGAAATTTCCTTTGTTTACTTTATGGTTCCAATAATGATGAAAAGGATGCAAAACATGCCGAAAGCAGCAGCTCTGTGGCTTACTTTATTTTGAAGATGCGCACCAACGACGAACAGAGTTGA MSSLFKSHEVSDSCNSTGRLLRVVDILREEDGDGDGFFGDFGMSDAGERLADESVTVHCLSPRRIVARWVASFRRPKRRRAATEVKREKESGDSDDRLMCSRCARNGVDSGASSSSATEIAGPGLSRKEDTSFNLGVGCSLLYLVLASKNELSKMVDLRRQMELFLQDIKEEMGRKNNPFEPFHLNTDMACSSTDCQDGPCSTSQRSYQQDFSSQILSDAQSNIPNYHQKSCLHEQGERQERIDELESEFEAELERLQLHLEVESSSGRIEQLKIENAKNTDSTRSCCISSGEVIDLQEDGTNRQHGVPPVELERKLHELLKARQEERIKELEGALECVKQEVIEKESEVSWWKETAKVISKHIPAHSRLKLASQHDQLQQLRGNFLCLLYGSNNDEKDAKHAESSSSVAYFILKMRTNDEQS Homology
BLAST of Cp4.1LG02g05490 vs. ExPASy Swiss-Prot
Match: Q6NQ99 (Protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION OS=Arabidopsis thaliana OX=3702 GN=POLAR PE=1 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 2.9e-25 Identity = 101/335 (30.15%), Postives = 167/335 (49.85%), Query Frame = 0
BLAST of Cp4.1LG02g05490 vs. ExPASy Swiss-Prot
Match: A0A1P8B9P9 (Protein POLAR-like 1 OS=Arabidopsis thaliana OX=3702 GN=PL1 PE=3 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 1.2e-23 Identity = 106/353 (30.03%), Postives = 170/353 (48.16%), Query Frame = 0
BLAST of Cp4.1LG02g05490 vs. NCBI nr
Match: XP_023524241.1 (protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 736 bits (1899), Expect = 1.64e-266 Identity = 383/383 (100.00%), Postives = 383/383 (100.00%), Query Frame = 0
BLAST of Cp4.1LG02g05490 vs. NCBI nr
Match: XP_022940269.1 (protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION-like [Cucurbita moschata] >KAG6608301.1 Protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037648.1 Protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 726 bits (1874), Expect = 1.06e-262 Identity = 378/383 (98.69%), Postives = 380/383 (99.22%), Query Frame = 0
BLAST of Cp4.1LG02g05490 vs. NCBI nr
Match: XP_022982454.1 (protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION-like [Cucurbita maxima]) HSP 1 Score: 725 bits (1872), Expect = 2.13e-262 Identity = 377/383 (98.43%), Postives = 380/383 (99.22%), Query Frame = 0
BLAST of Cp4.1LG02g05490 vs. NCBI nr
Match: XP_038896747.1 (protein POLAR-like 1 [Benincasa hispida]) HSP 1 Score: 588 bits (1516), Expect = 3.97e-208 Identity = 312/380 (82.11%), Postives = 338/380 (88.95%), Query Frame = 0
BLAST of Cp4.1LG02g05490 vs. NCBI nr
Match: XP_022133236.1 (protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION-like isoform X2 [Momordica charantia]) HSP 1 Score: 586 bits (1510), Expect = 2.61e-207 Identity = 313/383 (81.72%), Postives = 335/383 (87.47%), Query Frame = 0
BLAST of Cp4.1LG02g05490 vs. ExPASy TrEMBL
Match: A0A6J1FJK7 (protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION-like OS=Cucurbita moschata OX=3662 GN=LOC111445943 PE=4 SV=1) HSP 1 Score: 726 bits (1874), Expect = 5.12e-263 Identity = 378/383 (98.69%), Postives = 380/383 (99.22%), Query Frame = 0
BLAST of Cp4.1LG02g05490 vs. ExPASy TrEMBL
Match: A0A6J1J4L3 (protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION-like OS=Cucurbita maxima OX=3661 GN=LOC111481273 PE=4 SV=1) HSP 1 Score: 725 bits (1872), Expect = 1.03e-262 Identity = 377/383 (98.43%), Postives = 380/383 (99.22%), Query Frame = 0
BLAST of Cp4.1LG02g05490 vs. ExPASy TrEMBL
Match: A0A6J1BUG1 (protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111005875 PE=4 SV=1) HSP 1 Score: 586 bits (1510), Expect = 1.26e-207 Identity = 313/383 (81.72%), Postives = 335/383 (87.47%), Query Frame = 0
BLAST of Cp4.1LG02g05490 vs. ExPASy TrEMBL
Match: A0A6J1BVE5 (protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111005875 PE=4 SV=1) HSP 1 Score: 586 bits (1510), Expect = 1.52e-207 Identity = 313/383 (81.72%), Postives = 335/383 (87.47%), Query Frame = 0
BLAST of Cp4.1LG02g05490 vs. ExPASy TrEMBL
Match: A0A0A0L4A3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G651980 PE=4 SV=1) HSP 1 Score: 566 bits (1458), Expect = 1.03e-199 Identity = 303/383 (79.11%), Postives = 335/383 (87.47%), Query Frame = 0
BLAST of Cp4.1LG02g05490 vs. TAIR 10
Match: AT4G31805.1 (WRKY family transcription factor ) HSP 1 Score: 117.9 bits (294), Expect = 2.0e-26 Identity = 101/335 (30.15%), Postives = 167/335 (49.85%), Query Frame = 0
BLAST of Cp4.1LG02g05490 vs. TAIR 10
Match: AT5G10890.1 (myosin heavy chain-related ) HSP 1 Score: 103.2 bits (256), Expect = 5.2e-22 Identity = 85/275 (30.91%), Postives = 138/275 (50.18%), Query Frame = 0
BLAST of Cp4.1LG02g05490 vs. TAIR 10
Match: AT3G09730.1 (unknown protein; Has 1171 Blast hits to 1097 proteins in 212 species: Archae - 14; Bacteria - 83; Metazoa - 583; Fungi - 105; Plants - 149; Viruses - 14; Other Eukaryotes - 223 (source: NCBI BLink). ) HSP 1 Score: 50.4 bits (119), Expect = 4.0e-06 Identity = 66/275 (24.00%), Postives = 124/275 (45.09%), Query Frame = 0
BLAST of Cp4.1LG02g05490 vs. TAIR 10
Match: AT3G09730.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages. ) HSP 1 Score: 50.4 bits (119), Expect = 4.0e-06 Identity = 66/275 (24.00%), Postives = 124/275 (45.09%), Query Frame = 0
BLAST of Cp4.1LG02g05490 vs. TAIR 10
Match: AT5G61040.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G08010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 47.4 bits (111), Expect = 3.4e-05 Identity = 57/188 (30.32%), Postives = 87/188 (46.28%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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