Cp4.1LG02g05290 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGTTCGAATTCTATGTAGCGAACATTGGGGTGGTTGGCTTCATATTGGCTTGAAGCCAACGGGCCCAATGAAGCCCTAACTCGTGTGGAGTTGTGGTAATGGAAATGCCGGGATGGTAGAACCAAACCACAATAATGCAAACCTTTCATCTTCCTTATGATGACTTCCTTTGATCCTTTTACTTTTAGGCTCTTCTTTGTTGGGTGGAATGTTAAATCATAACCAACTACATTTCTATTCTCAGGCTAAAGGTTAAAGTTCATTGTAAGAGCTCAATTGTCAGAATTTGGTTAGTTCAAAATTTTCATTCAAGATTCAAGTGTTCTCTCACCTCTGTTTGTATCTTTGTGGAAAAGAAAACAGGTTAATCAGGATTGGTCGACAAGTTTTCTAGTTGGAACAGTGACAATATCTCAAGCAAGATTTGATGAATAATTTCTCTAAGTATCTGACCTTGAATTTAAAATGGAAAGGAAGTATCTTTTTCCATAGGGCCATGAAAATGGACAGCTAATTCTTCGTTGATATATTTACTTTGATGGGTTTAGTAGACTTGAAGCATTCATTATATTATGTTGTTTAAGGCCATGGCAATGGTATCTTTTCAATCACTTTCTCAAGTCCAATCCCCAAGACTTTCTACCACAACAATGGCAACATTGAGCCATGGAAATGGCAGCCAAACTATATGTTTGGTGTTTCTTCCATCAATCAACTCGATCTACGCTAATACAAGCCGACCAAAAGAAGCAAGACTTAGATTATCATATACCAGATCTCTTCTTTTGATAGGACTTTGTGACCTCGTGAGGAAGGGAGTTTTGGGAACAAAGTCCCCAGATTTCAAAGTCCCAAAAAATGAGACGTCTGAAAGATCCTACTGAGTGACGCACTAAAGCCATGAAAGTGACCTTTTGGATTAGAAAAATGGCCTATGTCGTCCGACTTCTCCGTCAAGGGATTCCTATGGATTGCATTGGAGCGTATATTGAAGAAGTTATAGAGTCGCACTATCATTGTTTGGACAAACAAAACCGAGCTAGCTTCACATGCATTTCTTCATTTGCACACAACACCATTGACTCGTGCAAAGAAATTTGGTCCAAAATACATGTAAAGTAATTGACCTTCTTGGCTATGCTTACACAAGTCACTCTCTTTGTCGTCCAACAGCTCAACAGAAGAAATGGTTCCTTCAAGATATGGTAAGCTAAATTTAAGACTTAACTATAATGACTCTGTCTATAAATGTCTAACAAATACTGTTCATATCCTTGTAGGTATACTTTAATGGCTTCAAACAGCTAGATTGATGAAGAAGAACTAAGTTCCTAAAATTACCATTATCAAGTGAAAAGCACTTGCTAAAAGTGTTAGGTAAAGAGTATAACTTAAGTCATCCCCCACATAACCAAAATTATTTGCATTAGGACCAAACTTCTTCTTCCCCACTATATATATGTAAAGCCTTCAATCCTCTGTTTCTAACTTGAAATCTTTCTCTTGCCCACTCTATTCTAATGCATAGCATTTTTGTTAAGAGTAATTACCTTCAAATGGCTAGCTTCCATGCCGGATTTGTTTGCCTCCTGGCACTTGGGTTCTGCATGGTACAGCCGAACTTGGCCACAGTTCACACCGTCGGAGATACTTCCGGCTGGTCCCTTGGCGTTGATTATGGCACATGGGCCTCTGGGAAGGCCTTTGTCATCGGCGACAAACTTGGTTTGCTTACTTTTTTTCATCCGTTTTTCTCATGGGAATAATGTCGAACATCTTTTGTGCATTTGTATTTTTGATTGTATTCAGTTGTTTTTCTCATGGGATTAACGTCGAACACCTTTCGTGCATCTGTATTTGCTTATTTTCCTTCTCAAATCTCTTCATGACAGCGTTCAGCTATGGAGAAGGGCACACAGTGGACGAAGTTACCGCCAGTGACTACAAAGCATGCACGACTGGAAACTCCATAACTTCCGACAGTTCAGGCTCCACCACTATCACCTTAAAGACCGCCGGAACCCACTACTTCATTTGCAGCTCTATGGGGCACTGCGTCGGCGGCATGAAACTCTCCGTCACAGTCGGCGCCGGAGGACCGTCCACTTCTCCATCGTCAGGGGACGACAGCTCCACCACTCCAGCGTCACCGGCAAGGGACACCCCTTCAGTCACCGGAGCCACGCCGGCGACCACCACGCCTACAAAGCAGCTTCCAGCAGGTTCGTCGAATTCAGGGTCGTATGTTCTCCCGAATTTCTACGTGGCAATTTTGGCGATTTTGGTAGGTTCGTGCGTGTTGGCTTTAGGCTATTAAGAAATTGAGTTTATATATAAATTTGGCGGAGAGACTTGAGATATGTTTTTATGTGATTATACGCCGTCGTTTTGATTCGCATTTTCATTTGTTTGTATTGAGGTGGTCGGTTGGTTTATTTTTAAATTAATTTTGCCTTCTTTATTAAATAAATTAATAATTGTCTCTTAGCTAA AGTTCGAATTCTATGTAGCGAACATTGGGGTGGTTGGCTTCATATTGGCTTGAAGCCAACGGGCCCAATGAAGCCCTAACTCGTGTGGAGTTGTGGTAATGGAAATGCCGGGATGGTAGAACCAAACCACAATAATGCAAACCTTTCATCTTCCTTATGATGACTTCCTTTGATCCTTTTACTTTTAGGCTCTTCTTTGTTGGGTGGAATGTTAAATCATAACCAACTACATTTCTATTCTCAGGCTAAAGGTTAAAGTTCATTGTAAGAGCTCAATTGTCAGAATTTGGTTAGTTCAAAATTTTCATTCAAGATTCAAGTGTTCTCTCACCTCTGTTTGTATCTTTGTGGAAAAGAAAACAGGTTAATCAGGATTGGTCGACAAGTTTTCTAGTTGGAACAGTGACAATATCTCAAGCAAGATTTGATGAATAATTTCTCTAAGTATCTGACCTTGAATTTAAAATGGAAAGGAAGTATCTTTTTCCATAGGGCCATGAAAATGGACAGCTAATTCTTCGTTGATATATTTACTTTGATGGGTTTAGTAGACTTGAAGCATTCATTATATTATGTTGTTTAAGGCCATGGCAATGGTATCTTTTCAATCACTTTCTCAAGTCCAATCCCCAAGACTTTCTACCACAACAATGGCAACATTGAGCCATGGAAATGGCAGCCAAACTATATGTTTGGTGTTTCTTCCATCAATCAACTCGATCTACGCTAATACAAGCCGACCAAAAGAAGCAAGACTTAGATTATCATATACCAGATCTCTTCTTTTGATAGGACTTTGTGACCTCGTGAGGAAGGGAGTTTTGGGAACAAAGTCCCCAGATTTCAAAGTCCCAAAAAATGAGACGTCTGAAAGATCCTACTGAGTGACGCACTAAAGCCATGAAAGTGACCTTTTGGATTAGAAAAATGGCCTATGTCGTCCGACTTCTCCGTCAAGGGATTCCTATGGATTGCATTGGAGCGTATATTGAAGAAGTTATAGAGTCGCACTATCATTGTTTGGACAAACAAAACCGAGCTAGCTTCACATGCATTTCTTCATTTGCACACAACACCATTGACTCGTGCAAAGAAATTTGGTCCAAAATACATGTAAAGTAATTGACCTTCTTGGCTATGCTTACACAAGTCACTCTCTTTGTCGTCCAACAGCTCAACAGAAGAAATGGTTCCTTCAAGATATGAGTAATTACCTTCAAATGGCTAGCTTCCATGCCGGATTTGTTTGCCTCCTGGCACTTGGGTTCTGCATGGTACAGCCGAACTTGGCCACAGTTCACACCGTCGGAGATACTTCCGGCTGGTCCCTTGGCGTTGATTATGGCACATGGGCCTCTGGGAAGGCCTTTGTCATCGGCGACAAACTTGCGTTCAGCTATGGAGAAGGGCACACAGTGGACGAAGTTACCGCCAGTGACTACAAAGCATGCACGACTGGAAACTCCATAACTTCCGACAGTTCAGGCTCCACCACTATCACCTTAAAGACCGCCGGAACCCACTACTTCATTTGCAGCTCTATGGGGCACTGCGTCGGCGGCATGAAACTCTCCGTCACAGTCGGCGCCGGAGGACCGTCCACTTCTCCATCGTCAGGGGACGACAGCTCCACCACTCCAGCGTCACCGGCAAGGGACACCCCTTCAGTCACCGGAGCCACGCCGGCGACCACCACGCCTACAAAGCAGCTTCCAGCAGGTTCGTCGAATTCAGGGTCGTATGTTCTCCCGAATTTCTACGTGGCAATTTTGGCGATTTTGGTAGGTTCGTGCGTGTTGGCTTTAGGCTATTAAGAAATTGAGTTTATATATAAATTTGGCGGAGAGACTTGAGATATGTTTTTATGTGATTATACGCCGTCGTTTTGATTCGCATTTTCATTTGTTTGTATTGAGGTGGTCGGTTGGTTTATTTTTAAATTAATTTTGCCTTCTTTATTAAATAAATTAATAATTGTCTCTTAGCTAA ATGAGTAATTACCTTCAAATGGCTAGCTTCCATGCCGGATTTGTTTGCCTCCTGGCACTTGGGTTCTGCATGGTACAGCCGAACTTGGCCACAGTTCACACCGTCGGAGATACTTCCGGCTGGTCCCTTGGCGTTGATTATGGCACATGGGCCTCTGGGAAGGCCTTTGTCATCGGCGACAAACTTGCGTTCAGCTATGGAGAAGGGCACACAGTGGACGAAGTTACCGCCAGTGACTACAAAGCATGCACGACTGGAAACTCCATAACTTCCGACAGTTCAGGCTCCACCACTATCACCTTAAAGACCGCCGGAACCCACTACTTCATTTGCAGCTCTATGGGGCACTGCGTCGGCGGCATGAAACTCTCCGTCACAGTCGGCGCCGGAGGACCGTCCACTTCTCCATCGTCAGGGGACGACAGCTCCACCACTCCAGCGTCACCGGCAAGGGACACCCCTTCAGTCACCGGAGCCACGCCGGCGACCACCACGCCTACAAAGCAGCTTCCAGCAGGTTCGTCGAATTCAGGGTCGTATGTTCTCCCGAATTTCTACGTGGCAATTTTGGCGATTTTGGTAGGTTCGTGCGTGTTGGCTTTAGGCTATTAA MSNYLQMASFHAGFVCLLALGFCMVQPNLATVHTVGDTSGWSLGVDYGTWASGKAFVIGDKLAFSYGEGHTVDEVTASDYKACTTGNSITSDSSGSTTITLKTAGTHYFICSSMGHCVGGMKLSVTVGAGGPSTSPSSGDDSSTTPASPARDTPSVTGATPATTTPTKQLPAGSSNSGSYVLPNFYVAILAILVGSCVLALGY Homology
BLAST of Cp4.1LG02g05290 vs. ExPASy Swiss-Prot
Match: Q41001 (Blue copper protein OS=Pisum sativum OX=3888 PE=2 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 2.0e-37 Identity = 97/184 (52.72%), Postives = 121/184 (65.76%), Query Frame = 0
BLAST of Cp4.1LG02g05290 vs. ExPASy Swiss-Prot
Match: O80517 (Uclacyanin-2 OS=Arabidopsis thaliana OX=3702 GN=At2g44790 PE=2 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 2.3e-20 Identity = 65/144 (45.14%), Postives = 81/144 (56.25%), Query Frame = 0
BLAST of Cp4.1LG02g05290 vs. ExPASy Swiss-Prot
Match: Q96316 (Uclacyanin-3 OS=Arabidopsis thaliana OX=3702 GN=UCC3 PE=2 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 9.5e-19 Identity = 64/159 (40.25%), Postives = 85/159 (53.46%), Query Frame = 0
BLAST of Cp4.1LG02g05290 vs. ExPASy Swiss-Prot
Match: O82081 (Uclacyanin 1 OS=Arabidopsis thaliana OX=3702 GN=UCC1 PE=1 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.1e-14 Identity = 60/171 (35.09%), Postives = 88/171 (51.46%), Query Frame = 0
BLAST of Cp4.1LG02g05290 vs. ExPASy Swiss-Prot
Match: Q07488 (Blue copper protein OS=Arabidopsis thaliana OX=3702 GN=BCB PE=2 SV=2) HSP 1 Score: 70.5 bits (171), Expect = 2.5e-11 Identity = 69/193 (35.75%), Postives = 94/193 (48.70%), Query Frame = 0
BLAST of Cp4.1LG02g05290 vs. NCBI nr
Match: XP_023524383.1 (blue copper protein-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 389 bits (1000), Expect = 3.75e-136 Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0
BLAST of Cp4.1LG02g05290 vs. NCBI nr
Match: KAG6608264.1 (hypothetical protein SDJN03_01606, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 380 bits (976), Expect = 1.71e-132 Identity = 199/202 (98.51%), Postives = 199/202 (98.51%), Query Frame = 0
BLAST of Cp4.1LG02g05290 vs. NCBI nr
Match: XP_022940502.1 (blue copper protein-like [Cucurbita moschata]) HSP 1 Score: 374 bits (959), Expect = 6.67e-130 Identity = 196/202 (97.03%), Postives = 197/202 (97.52%), Query Frame = 0
BLAST of Cp4.1LG02g05290 vs. NCBI nr
Match: XP_022980897.1 (blue copper protein-like [Cucurbita maxima]) HSP 1 Score: 367 bits (942), Expect = 2.60e-127 Identity = 193/202 (95.54%), Postives = 193/202 (95.54%), Query Frame = 0
BLAST of Cp4.1LG02g05290 vs. NCBI nr
Match: XP_038897888.1 (blue copper protein-like [Benincasa hispida]) HSP 1 Score: 316 bits (810), Expect = 2.30e-107 Identity = 164/197 (83.25%), Postives = 174/197 (88.32%), Query Frame = 0
BLAST of Cp4.1LG02g05290 vs. ExPASy TrEMBL
Match: A0A6J1FJS8 (blue copper protein-like OS=Cucurbita moschata OX=3662 GN=LOC111446074 PE=4 SV=1) HSP 1 Score: 374 bits (959), Expect = 3.23e-130 Identity = 196/202 (97.03%), Postives = 197/202 (97.52%), Query Frame = 0
BLAST of Cp4.1LG02g05290 vs. ExPASy TrEMBL
Match: A0A6J1ISI5 (blue copper protein-like OS=Cucurbita maxima OX=3661 GN=LOC111480212 PE=4 SV=1) HSP 1 Score: 367 bits (942), Expect = 1.26e-127 Identity = 193/202 (95.54%), Postives = 193/202 (95.54%), Query Frame = 0
BLAST of Cp4.1LG02g05290 vs. ExPASy TrEMBL
Match: A0A6J1E4U3 (blue copper protein-like OS=Momordica charantia OX=3673 GN=LOC111026073 PE=4 SV=1) HSP 1 Score: 294 bits (753), Expect = 5.15e-99 Identity = 155/197 (78.68%), Postives = 166/197 (84.26%), Query Frame = 0
BLAST of Cp4.1LG02g05290 vs. ExPASy TrEMBL
Match: A0A5A7T903 (Blue copper protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G005940 PE=4 SV=1) HSP 1 Score: 293 bits (750), Expect = 1.58e-98 Identity = 154/198 (77.78%), Postives = 168/198 (84.85%), Query Frame = 0
BLAST of Cp4.1LG02g05290 vs. ExPASy TrEMBL
Match: A0A1S3CQN2 (blue copper protein-like OS=Cucumis melo OX=3656 GN=LOC103503682 PE=4 SV=1) HSP 1 Score: 293 bits (750), Expect = 1.58e-98 Identity = 154/198 (77.78%), Postives = 168/198 (84.85%), Query Frame = 0
BLAST of Cp4.1LG02g05290 vs. TAIR 10
Match: AT1G72230.1 (Cupredoxin superfamily protein ) HSP 1 Score: 128.6 bits (322), Expect = 5.5e-30 Identity = 84/187 (44.92%), Postives = 106/187 (56.68%), Query Frame = 0
BLAST of Cp4.1LG02g05290 vs. TAIR 10
Match: AT1G22480.1 (Cupredoxin superfamily protein ) HSP 1 Score: 114.8 bits (286), Expect = 8.3e-26 Identity = 72/159 (45.28%), Postives = 92/159 (57.86%), Query Frame = 0
BLAST of Cp4.1LG02g05290 vs. TAIR 10
Match: AT2G44790.1 (uclacyanin 2 ) HSP 1 Score: 100.5 bits (249), Expect = 1.6e-21 Identity = 65/144 (45.14%), Postives = 81/144 (56.25%), Query Frame = 0
BLAST of Cp4.1LG02g05290 vs. TAIR 10
Match: AT3G60280.1 (uclacyanin 3 ) HSP 1 Score: 95.1 bits (235), Expect = 6.8e-20 Identity = 64/159 (40.25%), Postives = 85/159 (53.46%), Query Frame = 0
BLAST of Cp4.1LG02g05290 vs. TAIR 10
Match: AT5G07475.1 (Cupredoxin superfamily protein ) HSP 1 Score: 90.9 bits (224), Expect = 1.3e-18 Identity = 48/132 (36.36%), Postives = 74/132 (56.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|