Cp4.1LG02g04070 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG02g04070
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Descriptionethylene-responsive transcription factor ERF003-like
LocationCp4.1LG02: 2695544 .. 2698755 (+)
RNA-Seq ExpressionCp4.1LG02g04070
SyntenyCp4.1LG02g04070
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGTCAGTTATGAATTGTATGCTTGAGCCATGCATATTTATGAATTGGCTCTACCGAAACTAATCAAGCACACCAACTTCGGGTCCAAGTTTTGTTCCTCAGTCTTCTAACCTCTTTCCAATTCCCCCATTGTATAAACAATGGTTGAAGTAACATAATCGATTAAATAAAGAGCGTGACGGACTTCTGCACAAATATTCTATCTAAAAGAAAATATTTGATCAGATTCCTATAAACCCAAACGTTATTGAAGGCAAGGGGGCTAAATGATATGATGAAAAATATGAACTAGCAATGTTCAAGAATCTAAAGGCGAATACTGATAACGATCATAACTTCATTAAGGAGTGGAAAATCGTGATATGTCAATGTAAGTAGTTTCCATAAATCTCTTGACTTCGATCAATTATTTAAAGAATGTCTATCAAGCTCGCTAAAGTTCTTCAAAATAAGAAGTAAATGCCATGAATATGTGGATAAACTGCTAAGCCACAGACATGATGCCTGCCAGAAAATTCATTCTATCCCGAACTACTTCAAACTTCAGTGTATAAATGATAACAAAAATATCAGATGAACTAAATTTCAGTTGCGCAAATATAATAATAGGTCCTTAAGAACACTTATGTCCGCAATCTTAACAAATTCAAAGTAAATGAGCATTAAAGTTATAAATCGAAAGCACCTCAGAACCCTAGCTTGGTGCGACGCCAGTGCCTGCGCTTTGCGTTGTATCTGAAAAACAATCGACAGTAGAACGCCAGAATGTAAGACTCAAAATCAGATCACAGACTTGAAAAAATGGCGATTCAAATGGCGTAGGCTTAACACCTGATAGTATTGTCGGTTCTCAGACGGATCCAGTGCGGGATAGGCCTGTTCTGCCTCATCTTCTTCGCGAGCTTCTTCTTGATTCTGAAAGTCTTGTGAGACGGCTGCGAATTGAAAGAGATGAGAAAATCGAATCACAAACTCTCGCAGTTTCAATCATCAAATGGAGAAGGACGAACAGCAATAGATTAACGGAAACAAGAAGTTCAGACTTCAGAGAGTTGAATAACAATACGTACCATCTTCGAGTCCTGTGTTCCGCGGCGAACTTGGAAGCAGACGGCGGTCTAACGAAAACCCTATCAGTATCGAACAAGTTTTTATATGCTCCACCGAAAAGGACAAGCGAGATATGCCCGCGGGCAGCCCAACCGAGATTCTAACCTCGTAAATGGGCTTGCAGTTGAGCCCAAACTTTTCCCACTCTTACAAGTTAATTGGGCCAACATTTGAAACTCATGGCCCACAAGGTAGAGCCAAACCCATCAGTTATTATTTTTATTTTTATTTTTATTTTTTTTAGAAATATTGATTGAATTAAATGATTTATCCTTATGTTAAGTGTGTGTCAATATATATACACACATGAACAATGTTAGTCACATCACGCTTGAAAGATACCGTAATACCCCAAGCCCACCGCAAGTAGATATTGTTCACTTTGACCCATTACGTATGGTCGTCAGCCTCACGATTTTAAAACGCGTCTATTAGGGAAAGGTTTTTACACCCTTATAAGAACGGTTTCATTCCCTTCTCCAACCGATGTGAGATCTTACAATCCACTCCCTTTGGGGCTAGCATCCTTGCTGGCGACTCTGTTATCATTTGTAATAGCTCAAGCGTACTGCTAAAAAATATTGTCTATTTTGGCCCGTATGGCCGACAACCTTAAATATTGTCCGTTTTAAAACATGTCTCCTAGGTAGAGACTTTCATACTCTTATAAGAAGAACTTTGTTTTTCTCTGCAACTGATGTGAGATCTCACATATACGTTCGACGTGTTTAGTAGCATTAACATTGTGCATAGCTCCATATAGTAAGACTGGCTTACTAATTATGAATTTACTTCCTATTTGATTTCGTAACGTTGGAAATGTTTTTGTCAAAACACTCAAAATATTAAACTAAATTGAACTTGTGTACTGCATTTGAGTTTAGTTAAAAGGGTAAGAACGTTTCAAAGCCGATATAGAAATACAGTTATAACGACACTGTTTGGTGAAAAATAACCCAAAACAAGCTCAATACGAAATATTTGATCAACGGCCTAAATTATTAGACTCCAATGAAGATAATCTTCTCGTGATTGAATATTCCCACAAACATGTAGTGACACAAAAAAATATTTTTATAATCTCAAACACGACGCTCAAAATCACATGAAACGTGTTAAATAATACCCCCCAAAAAAACTTTATATCAAAATCTAATCAAATATATATATATTTGGTACAAGTTCAAGACATGTGAACAGATTTTTTTGGTCTTTTTTTAGTGAGTTTTGAAACTTGAACTTACCTATTTCAGCAAAGCCAAAACGCCCAACAACCAACTGGCTGTGGCTATTGGACAAGGCCAAAAAAGAAGAGTTGATTGATTTTTAAACACACTCGTGAGACCCACTTGATATCAAATTGCTTGCCAGAAAGGCTTCACAAAAATGGCTCCGCGATTGCCGTTTTGTCAGCAACGACCAAATATAAAACCACCCATTGTGTTCTCTGCCCACAACTATCAATTTTGTGCTCTGTTTTTCATTGAGGCATTTTCACAAACACCTTGTGAGCAACAAAAGTTCCACCATGGCCAGACCTCAAAGGCAATATCGTGGCGTAAGACAAAGGCATTGGGGCTCTTGGGTCTCTGAAATTCGTCATCCTTCGTTGTCGGTCTCTCGTTTTTTACCTTGATTTTGGTGTTTTTTTAAGCCAATGTAATGAAATTTAAGGCACTGTTTTTACAGGAAGACGAGGATTTGGCTTGGAACATTTGAAACGGCGGAGGATGCAGCTAGGGCTTATGATGAAGCGGCGAGATTAATGTGTGGACCAAACGCAAGAACGAATTTCCCGTACAATCCAAACACGATTCAGTCGTCGAATTCCAAGATCTTGTCGGCCAATTTGACTGCGAAATTGCATAAATGTTATATGGCTTCTTCGCAGATTAGTAACCAGGAGTTTAAAAGAGAACTTCCGCCGCCGTTTGTGGCGGCGTCTTATGCCGATGCGGCGAGATCGATGGTGGAGGAGAATCGACCAACGGCGGCCGAGGCGGCGGAGCAAGAGGAACTGAAATTGTTGGAAGATGATCACATTGAGCAAATGATTGAGGAGCTTCTTTATTATGGATCCATGGAGTTTTGTTTGTGA

mRNA sequence

ATGAAGACGGATCCAGTGCGGGATAGGCCTGTTCTGCCTCATCTTCTTCGCGAGCTTCTTCTTGATTCTGAAAGTCTTGTGAGACGGCTGCGAATTGAAAGAGATGAGAAAATCGAATCACAAACTCTCGCAGTTTCAATCATCAAATGGAGAAGGACGAACAGCAATAGATTAACGGAAACAAGAAGTTCAGACTTCAGAGAGTTGAATAACAATACGTACCATCTTCGAGTCCTGTGTTCCGCGGCGAACTTGGAAGCAGACGGCGGTCTAACGAAAACCCTATCAGTATCGAACAAGAAGACGAGGATTTGGCTTGGAACATTTGAAACGGCGGAGGATGCAGCTAGGGCTTATGATGAAGCGGCGAGATTAATGTGTGGACCAAACGCAAGAACGAATTTCCCGTACAATCCAAACACGATTCAGTCGTCGAATTCCAAGATCTTGTCGGCCAATTTGACTGCGAAATTGCATAAATGTTATATGGCTTCTTCGCAGATTAGTAACCAGGAGTTTAAAAGAGAACTTCCGCCGCCGTTTGTGGCGGCGTCTTATGCCGATGCGGCGAGATCGATGGTGGAGGAGAATCGACCAACGGCGGCCGAGGCGGCGGAGCAAGAGGAACTGAAATTGTTGGAAGATGATCACATTGAGCAAATGATTGAGGAGCTTCTTTATTATGGATCCATGGAGTTTTGTTTGTGA

Coding sequence (CDS)

ATGAAGACGGATCCAGTGCGGGATAGGCCTGTTCTGCCTCATCTTCTTCGCGAGCTTCTTCTTGATTCTGAAAGTCTTGTGAGACGGCTGCGAATTGAAAGAGATGAGAAAATCGAATCACAAACTCTCGCAGTTTCAATCATCAAATGGAGAAGGACGAACAGCAATAGATTAACGGAAACAAGAAGTTCAGACTTCAGAGAGTTGAATAACAATACGTACCATCTTCGAGTCCTGTGTTCCGCGGCGAACTTGGAAGCAGACGGCGGTCTAACGAAAACCCTATCAGTATCGAACAAGAAGACGAGGATTTGGCTTGGAACATTTGAAACGGCGGAGGATGCAGCTAGGGCTTATGATGAAGCGGCGAGATTAATGTGTGGACCAAACGCAAGAACGAATTTCCCGTACAATCCAAACACGATTCAGTCGTCGAATTCCAAGATCTTGTCGGCCAATTTGACTGCGAAATTGCATAAATGTTATATGGCTTCTTCGCAGATTAGTAACCAGGAGTTTAAAAGAGAACTTCCGCCGCCGTTTGTGGCGGCGTCTTATGCCGATGCGGCGAGATCGATGGTGGAGGAGAATCGACCAACGGCGGCCGAGGCGGCGGAGCAAGAGGAACTGAAATTGTTGGAAGATGATCACATTGAGCAAATGATTGAGGAGCTTCTTTATTATGGATCCATGGAGTTTTGTTTGTGA

Protein sequence

MKTDPVRDRPVLPHLLRELLLDSESLVRRLRIERDEKIESQTLAVSIIKWRRTNSNRLTETRSSDFRELNNNTYHLRVLCSAANLEADGGLTKTLSVSNKKTRIWLGTFETAEDAARAYDEAARLMCGPNARTNFPYNPNTIQSSNSKILSANLTAKLHKCYMASSQISNQEFKRELPPPFVAASYADAARSMVEENRPTAAEAAEQEELKLLEDDHIEQMIEELLYYGSMEFCL
Homology
[Close]
BLAST of Cp4.1LG02g04070 vs. ExPASy Swiss-Prot
Match: Q94AW5 (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 GN=ERF003 PE=1 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 3.8e-35
Identity = 85/145 (58.62%), Postives = 100/145 (68.97%), Query Frame = 0 

Query: 101 KTRIWLGTFETAEDAARAYDEAARLMCGPNARTNFPYNPNTIQSSNSKILSANLTAKLHK 160
           KTRIWLGTFETAEDAARAYDEAARLMCGP ARTNFPYNPN I +S+SK+LSA LTAKLHK
Sbjct: 29  KTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPYNPNAIPTSSSKLLSATLTAKLHK 88

Query: 161 CYMASSQISNQ---------EFKRELPPPFVAASYADAARSMVE--ENRPTAAEAAEQEE 220
           CYMAS Q++ Q            +      V A+ +   R + E  E +     A  Q+ 
Sbjct: 89  CYMASLQMTKQTQTQTQTQTARSQSADSDGVTANESHLNRGVTETTEIKWEDGNANMQQN 148

Query: 221 LKLLEDDHIEQMIEELLYYGSMEFC 235
            + LE+DHIEQMIEELL+YGS+E C
Sbjct: 149 FRPLEEDHIEQMIEELLHYGSIELC 173

[Close]
BLAST of Cp4.1LG02g04070 vs. ExPASy Swiss-Prot
Match: P16146 (Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.6e-25
Identity = 72/138 (52.17%), Postives = 85/138 (61.59%), Query Frame = 0 

Query: 101 KTRIWLGTFETAEDAARAYDEAARLMCGPNARTNFPYNPNTIQSSNSKILSANLTAKLHK 160
           KTRIW GTFE+AEDAARAYDEAARLMCG  ARTNFPYNPN  QSS+SK+LSA L AKLH+
Sbjct: 29  KTRIWQGTFESAEDAARAYDEAARLMCGTRARTNFPYNPNASQSSSSKLLSATLIAKLHR 88

Query: 161 CYMASSQISNQEFKRELPPPFVAASYADAARSMVEENR--PTAAEAAEQE---------- 220
           CYMAS Q++      E P   + AS  +A + +  +    P   E  EQE          
Sbjct: 89  CYMASLQMTRPSSLPEAPR--IIASPNNAVKGIGADAMLLPKKREQEEQETGGNLDFKKV 148

[Close]
BLAST of Cp4.1LG02g04070 vs. ExPASy Swiss-Prot
Match: Q9XI33 (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN=WIN1 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 5.9e-12
Identity = 43/83 (51.81%), Postives = 50/83 (60.24%), Query Frame = 0 

Query: 101 KTRIWLGTFETAEDAARAYDEAARLMCGPNARTNFPYNPNTI-----------------Q 160
           K RIWLGTFETAE+AARAYDEAA LM G NA+TNFP N N                    
Sbjct: 28  KRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPLNNNNTGETSEGKTDISASSTMSS 87

Query: 161 SSNSKILSANLTAKLHKCYMASS 167
           S++S  LS+ L+AKL KC  + S
Sbjct: 88  STSSSSLSSILSAKLRKCCKSPS 110

[Close]
BLAST of Cp4.1LG02g04070 vs. ExPASy Swiss-Prot
Match: Q9SXS8 (Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum OX=4097 GN=ERF3 PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.2e-09
Identity = 37/93 (39.78%), Postives = 50/93 (53.76%), Query Frame = 0 

Query: 100 KKTRIWLGTFETAEDAARAYDEAARLMCGPNARTNFP------------YNPNTIQSSNS 159
           KKTR+WLGTF++AEDAARAYD AAR + GP A+TNFP            +NPN     +S
Sbjct: 48  KKTRVWLGTFDSAEDAARAYDAAARALRGPKAKTNFPLPYAHHHQFNQGHNPNNDPFVDS 107

Query: 160 KILSANLTAKLHKCYMASSQISNQEFKRELPPP 181
           +    +      +   +S   + + F    PPP
Sbjct: 108 RFYPQDNPIISQRPTSSSMSSTVESFSGPRPPP 140

[Close]
BLAST of Cp4.1LG02g04070 vs. ExPASy Swiss-Prot
Match: Q9LW49 (Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris OX=4096 GN=ERF4 PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.0e-08
Identity = 28/54 (51.85%), Postives = 39/54 (72.22%), Query Frame = 0 

Query: 100 KKTRIWLGTFETAEDAARAYDEAARLMCGPNARTNFPYNPNTIQSSNSKILSAN 154
           KK+R+WLGTF+TAE+AA+AYD AAR   GP A+TNFP       +S+S  + ++
Sbjct: 47  KKSRVWLGTFDTAEEAAKAYDTAAREFRGPKAKTNFPLPSENQSTSHSSTMESS 100

[Close]
BLAST of Cp4.1LG02g04070 vs. NCBI nr
Match: XP_023525758.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 267 bits (682), Expect = 7.29e-88
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0 

Query: 101 KTRIWLGTFETAEDAARAYDEAARLMCGPNARTNFPYNPNTIQSSNSKILSANLTAKLHK 160
           KTRIWLGTFETAEDAARAYDEAARLMCGPNARTNFPYNPNTIQSSNSKILSANLTAKLHK
Sbjct: 29  KTRIWLGTFETAEDAARAYDEAARLMCGPNARTNFPYNPNTIQSSNSKILSANLTAKLHK 88

Query: 161 CYMASSQISNQEFKRELPPPFVAASYADAARSMVEENRPTAAEAAEQEELKLLEDDHIEQ 220
           CYMASSQISNQEFKRELPPPFVAASYADAARSMVEENRPTAAEAAEQEELKLLEDDHIEQ
Sbjct: 89  CYMASSQISNQEFKRELPPPFVAASYADAARSMVEENRPTAAEAAEQEELKLLEDDHIEQ 148

Query: 221 MIEELLYYGSMEFCL 235
           MIEELLYYGSMEFCL
Sbjct: 149 MIEELLYYGSMEFCL 163

[Close]
BLAST of Cp4.1LG02g04070 vs. NCBI nr
Match: KAG7031771.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 260 bits (664), Expect = 3.99e-85
Identity = 131/135 (97.04%), Postives = 132/135 (97.78%), Query Frame = 0 

Query: 101 KTRIWLGTFETAEDAARAYDEAARLMCGPNARTNFPYNPNTIQSSNSKILSANLTAKLHK 160
           KTRIWLGTFETAEDAARAYDEAARLMCGPNARTNFPYNPNTIQSSNSKILSANLTAKLH+
Sbjct: 29  KTRIWLGTFETAEDAARAYDEAARLMCGPNARTNFPYNPNTIQSSNSKILSANLTAKLHR 88

Query: 161 CYMASSQISNQEFKRELPPPFVAASYADAARSMVEENRPTAAEAAEQEELKLLEDDHIEQ 220
           CYMAS QISNQEFKRELPPPF AASYADAARSMVEENRPTA EAAEQEELKLLEDDHIEQ
Sbjct: 89  CYMASLQISNQEFKRELPPPFAAASYADAARSMVEENRPTAPEAAEQEELKLLEDDHIEQ 148

Query: 221 MIEELLYYGSMEFCL 235
           MIEELLYYGSMEFCL
Sbjct: 149 MIEELLYYGSMEFCL 163

[Close]
BLAST of Cp4.1LG02g04070 vs. NCBI nr
Match: XP_022981066.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita maxima])

HSP 1 Score: 258 bits (659), Expect = 2.30e-84
Identity = 130/135 (96.30%), Postives = 131/135 (97.04%), Query Frame = 0 

Query: 101 KTRIWLGTFETAEDAARAYDEAARLMCGPNARTNFPYNPNTIQSSNSKILSANLTAKLHK 160
           KTRIWLGTFETAEDAARAYDEAARLMCGPNARTNFPYNPNTIQSSNSKILSANLTAKLH+
Sbjct: 29  KTRIWLGTFETAEDAARAYDEAARLMCGPNARTNFPYNPNTIQSSNSKILSANLTAKLHR 88

Query: 161 CYMASSQISNQEFKRELPPPFVAASYADAARSMVEENRPTAAEAAEQEELKLLEDDHIEQ 220
           CYMAS QISNQEFKRELPPPF  ASYADAARSMVEENRPTAAEAAEQEE KLLEDDHIEQ
Sbjct: 89  CYMASLQISNQEFKRELPPPFATASYADAARSMVEENRPTAAEAAEQEEQKLLEDDHIEQ 148

Query: 221 MIEELLYYGSMEFCL 235
           MIEELLYYGSMEFCL
Sbjct: 149 MIEELLYYGSMEFCL 163

[Close]
BLAST of Cp4.1LG02g04070 vs. NCBI nr
Match: KAG6608134.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 258 bits (659), Expect = 2.30e-84
Identity = 130/134 (97.01%), Postives = 131/134 (97.76%), Query Frame = 0 

Query: 102 TRIWLGTFETAEDAARAYDEAARLMCGPNARTNFPYNPNTIQSSNSKILSANLTAKLHKC 161
           TRIWLGTFETAEDAARAYDEAARLMCGPNARTNFPYNPNTIQSSNSKILSANLTAKLH+C
Sbjct: 30  TRIWLGTFETAEDAARAYDEAARLMCGPNARTNFPYNPNTIQSSNSKILSANLTAKLHRC 89

Query: 162 YMASSQISNQEFKRELPPPFVAASYADAARSMVEENRPTAAEAAEQEELKLLEDDHIEQM 221
           YMAS QISNQEFKRELPPPF AASYADAARSMVEENRPTA EAAEQEELKLLEDDHIEQM
Sbjct: 90  YMASLQISNQEFKRELPPPFAAASYADAARSMVEENRPTAPEAAEQEELKLLEDDHIEQM 149

Query: 222 IEELLYYGSMEFCL 235
           IEELLYYGSMEFCL
Sbjct: 150 IEELLYYGSMEFCL 163

[Close]
BLAST of Cp4.1LG02g04070 vs. NCBI nr
Match: XP_038899563.1 (ethylene-responsive transcription factor ERF003-like [Benincasa hispida])

HSP 1 Score: 184 bits (468), Expect = 1.54e-54
Identity = 105/156 (67.31%), Postives = 118/156 (75.64%), Query Frame = 0 

Query: 101 KTRIWLGTFETAEDAARAYDEAARLMCGPNARTNFPYNPNTIQSSNSKILSANLTAKLHK 160
           KTRIWLGTFETAEDAARAYDEAARLMCGP ARTNFP+NPN IQSS+S+ILSANLTAKLH+
Sbjct: 70  KTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFPFNPNAIQSSSSRILSANLTAKLHR 129

Query: 161 CYMASSQISNQ---EFKRELPPPF----------VAASYADAARSMVEENRPTAAE---- 220
           CYMAS QISNQ   EFKR++  PF          VA+S  +   ++VE+  P AA+    
Sbjct: 130 CYMASLQISNQVSGEFKRDVTAPFPEPAPLPCGGVASSVVEEIGTLVEQG-PCAADWMVR 189

Query: 221 ----AAEQEELKLLEDDHIEQMIEELLYYGSMEFCL 235
                +E  ELKLLEDDHIEQMIEEL YYGSMEFCL
Sbjct: 190 SVKIESEFGELKLLEDDHIEQMIEELRYYGSMEFCL 224

[Close]
BLAST of Cp4.1LG02g04070 vs. ExPASy TrEMBL
Match: A0A6J1IVF7 (ethylene-responsive transcription factor ERF003-like OS=Cucurbita maxima OX=3661 GN=LOC111480324 PE=4 SV=1)

HSP 1 Score: 258 bits (659), Expect = 1.11e-84
Identity = 130/135 (96.30%), Postives = 131/135 (97.04%), Query Frame = 0 

Query: 101 KTRIWLGTFETAEDAARAYDEAARLMCGPNARTNFPYNPNTIQSSNSKILSANLTAKLHK 160
           KTRIWLGTFETAEDAARAYDEAARLMCGPNARTNFPYNPNTIQSSNSKILSANLTAKLH+
Sbjct: 29  KTRIWLGTFETAEDAARAYDEAARLMCGPNARTNFPYNPNTIQSSNSKILSANLTAKLHR 88

Query: 161 CYMASSQISNQEFKRELPPPFVAASYADAARSMVEENRPTAAEAAEQEELKLLEDDHIEQ 220
           CYMAS QISNQEFKRELPPPF  ASYADAARSMVEENRPTAAEAAEQEE KLLEDDHIEQ
Sbjct: 89  CYMASLQISNQEFKRELPPPFATASYADAARSMVEENRPTAAEAAEQEEQKLLEDDHIEQ 148

Query: 221 MIEELLYYGSMEFCL 235
           MIEELLYYGSMEFCL
Sbjct: 149 MIEELLYYGSMEFCL 163

[Close]
BLAST of Cp4.1LG02g04070 vs. ExPASy TrEMBL
Match: A0A1S3BUB9 (ethylene-responsive transcription factor ERF003-like OS=Cucumis melo OX=3656 GN=LOC103493770 PE=4 SV=1)

HSP 1 Score: 177 bits (450), Expect = 1.81e-52
Identity = 101/153 (66.01%), Postives = 113/153 (73.86%), Query Frame = 0 

Query: 101 KTRIWLGTFETAEDAARAYDEAARLMCGPNARTNFPYNPNTIQSSNSKILSANLTAKLHK 160
           KTRIWLGTFETAEDAARAYDEAARLMCGP ARTNFPY+ + IQSSNS+ILS+NLTAKLH+
Sbjct: 50  KTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFPYSSSAIQSSNSRILSSNLTAKLHR 109

Query: 161 CYMASSQISNQ----EFKRELPPPFVAASYADAARSMVEENRPTAAEA------------ 220
           CYMAS QISNQ    EFKR++   F A +   +  S+VE+  P A E             
Sbjct: 110 CYMASLQISNQGSGEEFKRDITSAFPAPA---STSSVVEDIIPAAEEGPCAADWMVRSVK 169

Query: 221 --AEQEELKLLEDDHIEQMIEELLYYGSMEFCL 235
             +E  ELKLLEDDHIEQMIEEL YYGSMEFCL
Sbjct: 170 MESEFGELKLLEDDHIEQMIEELRYYGSMEFCL 199

[Close]
BLAST of Cp4.1LG02g04070 vs. ExPASy TrEMBL
Match: A0A0A0L5N2 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G652640 PE=4 SV=1)

HSP 1 Score: 177 bits (449), Expect = 2.90e-52
Identity = 100/152 (65.79%), Postives = 112/152 (73.68%), Query Frame = 0 

Query: 101 KTRIWLGTFETAEDAARAYDEAARLMCGPNARTNFPYNPNTIQSSNSKILSANLTAKLHK 160
           KTRIWLGTFETAEDAARAYDEAARLMCGP ARTNFPY+P+ IQSSNS+ILS+NLTAKLH+
Sbjct: 55  KTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFPYSPSAIQSSNSRILSSNLTAKLHR 114

Query: 161 CYMASSQISNQ---EFKRELPPPFVAASYADAARSMVEENRPTAAEA------------- 220
           CYMAS +ISNQ   EFK ++   F A +   +  S+VEE  P   E              
Sbjct: 115 CYMASLEISNQGSAEFKSDITAAFPAPA---STSSVVEEIIPAVEEVPCAADWMVRSVKI 174

Query: 221 -AEQEELKLLEDDHIEQMIEELLYYGSMEFCL 235
            +E  ELKLLEDDHIEQMIEEL YYGSMEFCL
Sbjct: 175 ESEFGELKLLEDDHIEQMIEELRYYGSMEFCL 203

[Close]
BLAST of Cp4.1LG02g04070 vs. ExPASy TrEMBL
Match: D5L105 (AP2 domain class transcription factor OS=Malus domestica OX=3750 GN=AP2D21 PE=2 SV=1)

HSP 1 Score: 161 bits (407), Expect = 3.03e-46
Identity = 87/143 (60.84%), Postives = 101/143 (70.63%), Query Frame = 0 

Query: 101 KTRIWLGTFETAEDAARAYDEAARLMCGPNARTNFPYNPNTIQSSNSKILSANLTAKLHK 160
           KTRIWLGTFETAEDAARAYDEAARLMCGP ARTNFPYNPN  QSS SK+LSA LTAKLH+
Sbjct: 29  KTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPYNPNASQSSASKLLSATLTAKLHR 88

Query: 161 CYMASSQISNQEFKRELPPPFVAASYADAARSMVEENRPTAAE---------AAEQEELK 220
           CYMAS Q++    +    P  +A+S A       E ++P A E          +  ++ K
Sbjct: 89  CYMASLQMTKTSLQEPKKPQALASSGAKMPDIKPEIHQPVAEENWVVREVKVESSSQQFK 148

Query: 221 LLEDDHIEQMIEELLYYGSMEFC 234
            LEDDHIEQMIEELL+YGS+E C
Sbjct: 149 PLEDDHIEQMIEELLHYGSIELC 171

[Close]
BLAST of Cp4.1LG02g04070 vs. ExPASy TrEMBL
Match: A0A5N5HWY8 (Ethylene-responsive transcription factor ERF003-like OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_032699 PE=4 SV=1)

HSP 1 Score: 161 bits (407), Expect = 3.03e-46
Identity = 87/143 (60.84%), Postives = 101/143 (70.63%), Query Frame = 0 

Query: 101 KTRIWLGTFETAEDAARAYDEAARLMCGPNARTNFPYNPNTIQSSNSKILSANLTAKLHK 160
           KTRIWLGTFETAEDAARAYDEAARLMCGP ARTNFPYNPN  QSS SK+LSA LTAKLH+
Sbjct: 29  KTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPYNPNASQSSASKLLSATLTAKLHR 88

Query: 161 CYMASSQISNQEFKRELPPPFVAASYADAARSMVEENRPTAAE---------AAEQEELK 220
           CYMAS Q++    +    P  +A+S A       E ++P A E          +  ++ K
Sbjct: 89  CYMASLQMTKTSLQEPKKPQTLASSGAKMPDIKPEIHQPVAEENWVVREVKVESSSQQFK 148

Query: 221 LLEDDHIEQMIEELLYYGSMEFC 234
            LEDDHIEQMIEELL+YGS+E C
Sbjct: 149 PLEDDHIEQMIEELLHYGSIELC 171

[Close]
BLAST of Cp4.1LG02g04070 vs. TAIR 10
Match: AT5G25190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 149.8 bits (377), Expect = 2.7e-36
Identity = 85/145 (58.62%), Postives = 100/145 (68.97%), Query Frame = 0 

Query: 101 KTRIWLGTFETAEDAARAYDEAARLMCGPNARTNFPYNPNTIQSSNSKILSANLTAKLHK 160
           KTRIWLGTFETAEDAARAYDEAARLMCGP ARTNFPYNPN I +S+SK+LSA LTAKLHK
Sbjct: 29  KTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPYNPNAIPTSSSKLLSATLTAKLHK 88

Query: 161 CYMASSQISNQ---------EFKRELPPPFVAASYADAARSMVE--ENRPTAAEAAEQEE 220
           CYMAS Q++ Q            +      V A+ +   R + E  E +     A  Q+ 
Sbjct: 89  CYMASLQMTKQTQTQTQTQTARSQSADSDGVTANESHLNRGVTETTEIKWEDGNANMQQN 148

Query: 221 LKLLEDDHIEQMIEELLYYGSMEFC 235
            + LE+DHIEQMIEELL+YGS+E C
Sbjct: 149 FRPLEEDHIEQMIEELLHYGSIELC 173

[Close]
BLAST of Cp4.1LG02g04070 vs. TAIR 10
Match: AT1G15360.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 72.8 bits (177), Expect = 4.2e-13
Identity = 43/83 (51.81%), Postives = 50/83 (60.24%), Query Frame = 0 

Query: 101 KTRIWLGTFETAEDAARAYDEAARLMCGPNARTNFPYNPNTI-----------------Q 160
           K RIWLGTFETAE+AARAYDEAA LM G NA+TNFP N N                    
Sbjct: 28  KRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPLNNNNTGETSEGKTDISASSTMSS 87

Query: 161 SSNSKILSANLTAKLHKCYMASS 167
           S++S  LS+ L+AKL KC  + S
Sbjct: 88  STSSSSLSSILSAKLRKCCKSPS 110

[Close]
BLAST of Cp4.1LG02g04070 vs. TAIR 10
Match: AT5G11190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 62.0 bits (149), Expect = 7.4e-10
Identity = 38/70 (54.29%), Postives = 44/70 (62.86%), Query Frame = 0 

Query: 101 KTRIWLGTFETAEDAARAYDEAARLMCGPNARTNFPY-----NPNTIQSSNS-----KIL 160
           K R+WLGTFETAE AARAYD+AA LM G NA+TNFP        + ++  NS     K L
Sbjct: 28  KRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPVVKSEEGSDHVKDVNSPLMSPKSL 87

[Close]
BLAST of Cp4.1LG02g04070 vs. TAIR 10
Match: AT1G50640.1 (ethylene responsive element binding factor 3 )

HSP 1 Score: 60.8 bits (146), Expect = 1.6e-09
Identity = 26/42 (61.90%), Postives = 35/42 (83.33%), Query Frame = 0 

Query: 100 KKTRIWLGTFETAEDAARAYDEAARLMCGPNARTNFPYNPNT 142
           KK R+WLGTF++AE+AARAYD AAR + GP A+TNFP + ++
Sbjct: 48  KKARVWLGTFDSAEEAARAYDSAARNLRGPKAKTNFPIDSSS 89

[Close]
BLAST of Cp4.1LG02g04070 vs. TAIR 10
Match: AT5G19790.1 (related to AP2 11 )

HSP 1 Score: 60.1 bits (144), Expect = 2.8e-09
Identity = 31/49 (63.27%), Postives = 37/49 (75.51%), Query Frame = 0 

Query: 98  SNKKTRIWLGTFETAEDAARAYDEAARLMCGPNARTNFP-YNPNTIQSS 146
           + +K R+WLGTFETAE+AARAYDEAA L+ G N RTNF  + PN  Q S
Sbjct: 40  TTQKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNFANHFPNNSQLS 88

The following BLAST results are available for this feature:
BLAST of Cp4.1LG02g04070 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q94AW53.8e-3558.62Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 ... [more]
P161464.6e-2552.17Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1[more]
Q9XI335.9e-1251.81Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN... [more]
Q9SXS81.2e-0939.78Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum OX=4097 GN=ERF3 ... [more]
Q9LW491.0e-0851.85Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris OX=4096 GN=ER... [more]
BLAST of Cp4.1LG02g04070 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023525758.17.29e-88100.00ethylene-responsive transcription factor ERF003-like [Cucurbita pepo subsp. pepo... [more]
KAG7031771.13.99e-8597.04Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp.... [more]
XP_022981066.12.30e-8496.30ethylene-responsive transcription factor ERF003-like [Cucurbita maxima][more]
KAG6608134.12.30e-8497.01Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp.... [more]
XP_038899563.11.54e-5467.31ethylene-responsive transcription factor ERF003-like [Benincasa hispida][more]
BLAST of Cp4.1LG02g04070 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1IVF71.11e-8496.30ethylene-responsive transcription factor ERF003-like OS=Cucurbita maxima OX=3661... [more]
A0A1S3BUB91.81e-5266.01ethylene-responsive transcription factor ERF003-like OS=Cucumis melo OX=3656 GN=... [more]
A0A0A0L5N22.90e-5265.79AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G652640 PE=... [more]
D5L1053.03e-4660.84AP2 domain class transcription factor OS=Malus domestica OX=3750 GN=AP2D21 PE=2 ... [more]
A0A5N5HWY83.03e-4660.84Ethylene-responsive transcription factor ERF003-like OS=Pyrus ussuriensis x Pyru... [more]
BLAST of Cp4.1LG02g04070 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G25190.12.7e-3658.62Integrase-type DNA-binding superfamily protein [more]
AT1G15360.14.2e-1351.81Integrase-type DNA-binding superfamily protein [more]
AT5G11190.17.4e-1054.29Integrase-type DNA-binding superfamily protein [more]
AT1G50640.11.6e-0961.90ethylene responsive element binding factor 3 [more]
AT5G19790.12.8e-0963.27related to AP2 11 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 90..142
e-value: 1.0E-14
score: 64.9
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 99..128
e-value: 5.9E-6
score: 26.4
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 60..136
score: 12.589066
IPR001471AP2/ERF domainCDDcd00018AP2coord: 97..138
e-value: 1.67817E-19
score: 77.3119
IPR036955AP2/ERF domain superfamilyGENE3D3.30.730.10AP2/ERF domaincoord: 73..137
e-value: 4.5E-16
score: 60.7
NoneNo IPR availablePANTHERPTHR31194:SF112ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003coord: 101..234
NoneNo IPR availablePANTHERPTHR31194SHN SHINE , DNA BINDING / TRANSCRIPTION FACTORcoord: 101..234
IPR016177DNA-binding domain superfamilySUPERFAMILY54171DNA-binding domaincoord: 99..138

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG02g04070.1Cp4.1LG02g04070.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 DNA-binding transcription factor activity