Cp4.1LG02g03970 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGGTGAACGACGACTGGCTTACGGCGGCCATGGCCGACGATGGAGTGGTGGTCGAGTTGTTGGTGCGGTTGAAGCAATCGCAGGCTGTGTCGCCTTCCAAATCTCCGCTTCCGGTGACGGTGCCGTTCACTTGGGGGATTAGGCAGCTGAGGTCTAGAACGGCGACGACGGTTGGTAGATGTGGCGATGGTGTCTTGGTGAGGAACAATAAGGATGTTGACTCAACCAGATGGAGTCCTACGACGCCGCTTTCGTGGAGTGGTGGAGGTTCGCCTTCTGCTACGCTTGACGGTTATGAGGAGTCTAGCCGTCCGGCTACACTCTCGCACGCTGCTTCCAGATTTAAGGTTCTTGACTTTTTCTCACTATTCTTATGATTCTGTGTCCTCTGTTTTGGATTTTTGCAGTTTCGTCTCTTATCTCGACTCTGTGTGCGCTCTGGTTTTCCGATCTTTGCGGTTTTTTTTTGCTACGAGTTCTTAAATCTTAGCGCTGGCGTTCTTAATCACGGTTTTCCTTTGGCGGTGGTGTCGGCTGTGGAGTTCAGCGGCGTGGATTCTCTCATGAAACATTCTTATCTCGGAGAACCATCGTAGATTGTATTGTGACTGTTTAGCCATTTGTTTTTCCAAGAATCCGATTCTGATTCCGTATCATGAAACATCTCTTGATTTCCTCGTCATTTTCTTCTACAGCTTAACGCAACAAAATTCCTCTCTCAGAGCTCACACAACTGCAAATCTCTCAATTCCATAACTGCTCTGTATTTTCACCAAACAGTTTCAAGTTCTCGCCATCAATGGCGGACAACCTTCACGAATCACCGTTGAGAAACTGCTTTTTAATTCAAAAATCCCCGATATACCTCTAGATTCTCCAATCACGTTCACGTGAAGAGACGAGGTCAGCGGATGAACGCTGCTTGAAATTACTTCGCGTTTTCTCCTCGCCTCGATTCAAATCGCCTGTGGACTCGAATTCACTCATTTCTTCAAATTGACCAAAACGCCCTTCCAATCCCTCGCTAGATTCCAAAGCCTTTCGAATCGTACACCGAGTCGATATTTCGTCACACACGAGACTTTCCTATAGAAACTCTCTTCCATCGCCGACGGTTTACTCATGGACCATTGAAAGCTCCTGGAAACTTCCCTACGGCCATTGTCCTTTCTAATTTTTACCATACTACCCCTTGACGCGTAAAAGATTCATCACAAAGCACGAGGGTATTCTAGTCACACACACACACACACACACAAATCCCGAGCCGGTTCGATCGAACCGGATGCCAGATTCGACGGTGGATGACACTGCAAAGTGAGGGCCCAAATCAGATCAGGCAAAGAGGAGAGGCGTTCATAAGAGAGGTCTGCGTTAGGTTTGAAGAGTAATTATCAGGTGTGGCGATGGTACATGGTTGGTTCCAGTGTTCCCTTACTGGAAACCCATTATTTATAATTTTCATGGATTTGAATTGGCATCATGAAAATGGTTGGAAGAAGAACAATAAAATAATGGAATTGTTGTTTAAGTTGTTGGGCCATTAGAGAGGATGGGAATAGGATAAAGGAAGATCCACGTGACCGAGTCACGCGGGGTGGGAATACAAAACAGGAGCCGGTGTGGGTGTGGTCGCAACGAAGTCTTAAAGTGACCACGTGGAATTCATGATGTGGCGTGCGATTCTGGTAAATGCAAAATTGGGTGATATTTTTTGTGGAAAGAGAAATGGGCTTAGTCCATGTGGAATTCATGATGTGGACTTCATCTCATTTGCCTTGACTGCTAGTTCTACCTTCAAACTTGGTGTTAGTAAATCATTCTTGTCAATTTGTTTGGATTTTTGTTTTCTAATCTTGATTCTCGTTAATGGGTTTAGACTTGAATTAAACTTTATGTTATTTGTTTATGATTCTGATTCTTATTAATGGGTTTAGAGTTGACTTTTGATCCTTATTTATGAGCTTGGAGTTGACTTGAACTTAGTTTATATGTGTTTGGATTTGGTGTTTTCAGGGTGCTGCTGCAAATGAATCCGGGGCTGGTACTGCAACAAAGAGATTAAGACGAAAGAAGGTAATTTCTTAAAGAATGTTGTTGAAAACAGATAATGGGTTTGTTGGGGTGTGGCTGTATGAGTCAAGCATTTGTTTGTTGCCGACGTTAGATGAGTTGTTGGCTTGCATTGTTCTTGAAGAATGCATGGTTGGTTCAACCACTAATTGTAACGAAGCTTGTTTTAGTGTTGTTTAATGATGAAATACTCTTGTTGTTTGTTTTTCAGACATTTGCTGAACTTAAAGAAGAGGAGAGCGTGCTTTTGAATGAGAAAATTCATCTAAAAAAGGTATAATTTTAATATTGTTTTTATGGGTAGAACAACAACCTTTTTTCTTTTTTGAAAATTGGTAGAACAACAACTTTAAAGTTGTAATTTCTTTTATATATTCCTGGTCTTTTTAGCCTTTTTCTTTAATATATATATTGAATCTAACGTAGATGAAAAGTCCCACGTTGGCTAATTTAGGGAATGATCATAGGTTTATAATCAATGAACATTATCTCCATTGATATGAGGCATTTTGGGAAAGCCTAAAGCAAAGCTATGAGAGTGAGTTTATGCTCGGAGTAGACAATATCATACTATTGTGGAGACTAGTGTTCAGCTAACATTGCCTTATCTTGTTCGTGATTTTGATGACCTAACTTACTTTTTGAACAGGAACTTGCCAATCTAAGAGCTACCTTCGAAGAACAAAGAGCCAAGAATGAGAGTTTGAAGAAAATGAAGGTAAGTAATTGTCTGCTTTCTTTTTCCATGAACATCTGAACTATACTGTCTTTTTGCCTTTGTAAAGTTTCAAAAAGATTGAACAGAAAAGATTCTCGAATTTCCCTTCACCTAAAGCACTAACTTATCAAACTAAGCAATCTCTAAAACAATCTCTTGCTTGTTTGCTTTTACTTTATGAACGAACAGGTGGATTTCAACATGAAATACGCAGAAAAATTCAATACAAACTCCAAGATGATGATGATGATGATGCAAGAGGACTCTTCATCCACACTAACCCATCAAAGGGAAAGCTCTAACATTGAAGCAATTCCTCCAACATTGCTGCCACTCACCGGGGCAGGTTCGGGGAGGTTCGAGGCTCAATCGCAGACGAAAAGCAAATCATCGACCGAAGACGATTGTGTCTTTTTCTTACCGGATTTGAATATGACACCCTCAGAGGATTGACCAAGGTGACAAAAATACATCGATTATGTCTCTCTTTCTAATATGTTGACATGGTTGAAGCAATTATTTGATGATGGCAAAAAAGTTTGCTATATCTTGTACAAGGCCTAAGCAGACACTGTTATTAATATTGGTTTAACATTTGTTGATTCCTACGTTCTATAATTTTTCTTTTTTGAAGGCTGTAATCCTTTGGGTTAAACCCATTGTTGAATCCCTCCCTCTACAATGGTGTAGGTTTTATTCATTCGTTGTAGCGTTCTATATAGGTACACAGTCACTGAATTTGTTTGTCTCAACTACTTTGTTATAAGGCTTTGTTTTTGGGCATTTCCACTTTTTACTGCGCCTTCTTTTTGTTTATGCTTTCTTTCTCCTGATGTTCACACAAAAGTGCCTTAATAATGCCAAGGATTTATTTAGTGCACAAGGTTGAATTAAAATATAAGGCGTTTCAAAACTGGAAAATCGACTCTGAAATATAAAGTATCTAGGGTAGAAATGAAGACGTTTGACATTTTCATCTCGACTTGGGATGAGAAGTTCTCTTCAACAAAGATTCATCACGACTCCGGGATATGAAGTTCTTTTAATAAAGATTCGTCTCGACTCAGGGACATGAAGTTCTTTTAACAAAGATTCGTCTCGACTCAGGGACATGAAGTTCTTTTAACAAAGATTCGTCTCGACTTGGGACATGAGGTTTTCTTCAACAAAGATTCATCTCGATTCGGGACATTACAAAGATTCATCTCGACTCGGGACATGACAAAGATTCATCTCGACTCGGGACATGACAAAGATTCATCTCGACTCGGGACATGACAAAGATTCATCACGACTCGGGACATGACAAAGATTCATCACGACTCGGGACATGAAGTTCTTTTAACAAAGATTCGTCTCGACTCGGGACATGAAGTTCTTTTAACAAAGATTCGTCTTGACTCGGGACATGAAGTTCTTTTAACAAAGATTCGTCTCAACTCGGGACATGAAGTTCTCTTCAACAAAGATTCATCTCAACTTCTCTTCAACAAGCTCGATGCAACGATATAATACAAGCTCTACTGGGTTGAGTGCACACTCCATGTCCACGGCAATTCGATCGTAGTCGGTCTTGTTCTCCGACATGATGCCCGTTACAAGGGTCCGGAGAGGTAGAAGCCATTCGTTATAGGACTTCTGCAGATTGCTTTTCAATAACACTCCAGTATGGTTTGTGCTTCCTGTTCCATAAGTTCAAAAAAGTTTCAGTTTGGCCAGCCCTTTATATGCCTCAGGTAAGATGAAAAGTACATGCCAAAGGACAATTTCTAAATTCTTCAGCAA ATGATGCAATCGCAGGCTGTGTCGCCTTCCAAATCTCCGCTTCCGGTGACGGTGCCGTTCACTTGGGGGATTAGGCAGCTGAGGTCTAGAACGGCGACGACGGTTGGTAGATGTGGCGATGGTGTCTTGGTGAGGAACAATAAGGATGTTGACTCAACCAGATGGAGTCCTACGACGCCGCTTTCGTGGAGTGGTGGAGGTTCGCCTTCTGCTACGCTTGACGGTTATGAGGAGTCTAGCCGTCCGGCTACACTCTCGCACGCTGCTTCCAGATTTAAGGGTGCTGCTGCAAATGAATCCGGGGCTGGTACTGCAACAAAGAGATTAAGACGAAAGAAGACATTTGCTGAACTTAAAGAAGAGGAGAGCGTGCTTTTGAATGAGAAAATTCATCTAAAAAAGGTATAATTTTAATATTGTTTTTATGGGTAGAACAACAACCTTTTTTCTTTTTTGAAAATTGGTAGAACAACAACTTTAAAGTTGTAATTTCTTTTATATATTCCTGGTCTTTTTAGCCTTTTTCTTTAATATATATATTGAATCTAACGTAGATGAAAAGTCCCACGTTGGCTAATTTAGGGAATGATCATAGGTTTATAATCAATGAACATTATCTCCATTGATATGAGGCATTTTGGGAAAGCCTAAAGCAAAGCTATGAGAGTGAGTTTATGCTCGGAGTAGACAATATCATACTATTGTGGAGACTAGTGTTCAGCTAACATTGCCTTATCTTGTTCGTGATTTTGATGACCTAACTTACTTTTTGAACAGGAACTTGCCAATCTAAGAGCTACCTTCGAAGAACAAAGAGCCAAGAATGAGAGTTTGAAGAAAATGAAGGTGGATTTCAACATGAAATACGCAGAAAAATTCAATACAAACTCCAAGATGATGATGATGATGATGCAAGAGGACTCTTCATCCACACTAACCCATCAAAGGGAAAGCTCTAACATTGAAGCAATTCCTCCAACATTGCTGCCACTCACCGGGGCAGGTTCGGGGAGGTTCGAGGCTCAATCGCAGACGAAAAGCAAATCATCGACCGAAGACGATTGTGTCTTTTTCTTACCGGATTTGAATATGACACCCTCAGAGGATTGACCAAGGTGACAAAAATACATCGATTATGTCTCTCTTTCTAATATGTTGACATGGTTGAAGCAATTATTTGATGATGGCAAAAAAGTTTGCTATATCTTGTACAAGGCCTAAGCAGACACTGTTATTAATATTGGTTTAACATTTGTTGATTCCTACGTTCTATAATTTTTCTTTTTTGAAGGCTGTAATCCTTTGGGTTAAACCCATTGTTGAATCCCTCCCTCTACAATGGTGTAGGTTTTATTCATTCGTTGTAGCGTTCTATATAGGTACACAGTCACTGAATTTGTTTGTCTCAACTACTTTGTTATAAGGCTTTGTTTTTGGGCATTTCCACTTTTTACTGCGCCTTCTTTTTGTTTATGCTTTCTTTCTCCTGATGTTCACACAAAAGTGCCTTAATAATGCCAAGGATTTATTTAGTGCACAAGGTTGAATTAAAATATAAGGCGTTTCAAAACTGGAAAATCGACTCTGAAATATAAAGTATCTAGGGTAGAAATGAAGACGTTTGACATTTTCATCTCGACTTGGGATGAGAAGTTCTCTTCAACAAAGATTCATCACGACTCCGGGATATGAAGTTCTTTTAATAAAGATTCGTCTCGACTCAGGGACATGAAGTTCTTTTAACAAAGATTCGTCTCGACTCAGGGACATGAAGTTCTTTTAACAAAGATTCGTCTCGACTTGGGACATGAGGTTTTCTTCAACAAAGATTCATCTCGATTCGGGACATTACAAAGATTCATCTCGACTCGGGACATGACAAAGATTCATCTCGACTCGGGACATGACAAAGATTCATCTCGACTCGGGACATGACAAAGATTCATCACGACTCGGGACATGACAAAGATTCATCACGACTCGGGACATGAAGTTCTTTTAACAAAGATTCGTCTCGACTCGGGACATGAAGTTCTTTTAACAAAGATTCGTCTTGACTCGGGACATGAAGTTCTTTTAACAAAGATTCGTCTCAACTCGGGACATGAAGTTCTCTTCAACAAAGATTCATCTCAACTTCTCTTCAACAAGCTCGATGCAACGATATAATACAAGCTCTACTGGGTTGAGTGCACACTCCATGTCCACGGCAATTCGATCGTAGTCGGTCTTGTTCTCCGACATGATGCCCGTTACAAGGGTCCGGAGAGGTAGAAGCCATTCGTTATAGGACTTCTGCAGATTGCTTTTCAATAACACTCCAGTATGGTTTGTGCTTCCTGTTCCATAAGTTCAAAAAAGTTTCAGTTTGGCCAGCCCTTTATATGCCTCAGGTAAGATGAAAAGTACATGCCAAAGGACAATTTCTAAATTCTTCAGCAA ATGATGCAATCGCAGGCTGTGTCGCCTTCCAAATCTCCGCTTCCGGTGACGGTGCCGTTCACTTGGGGGATTAGGCAGCTGAGGTCTAGAACGGCGACGACGGTTGGTAGATGTGGCGATGGTGTCTTGGTGAGGAACAATAAGGATGTTGACTCAACCAGATGGAGTCCTACGACGCCGCTTTCGTGGAGTGGTGGAGGTTCGCCTTCTGCTACGCTTGACGGTTATGAGGAGTCTAGCCGTCCGGCTACACTCTCGCACGCTGCTTCCAGATTTAAGGGTGCTGCTGCAAATGAATCCGGGGCTGGTACTGCAACAAAGAGATTAAGACGAAAGAAGACATTTGCTGAACTTAAAGAAGAGGAGAGCGTGCTTTTGAATGAGAAAATTCATCTAAAAAAGGTATAA MMQSQAVSPSKSPLPVTVPFTWGIRQLRSRTATTVGRCGDGVLVRNNKDVDSTRWSPTTPLSWSGGGSPSATLDGYEESSRPATLSHAASRFKGAAANESGAGTATKRLRRKKTFAELKEEESVLLNEKIHLKKV Homology
BLAST of Cp4.1LG02g03970 vs. NCBI nr
Match: KAG7031773.1 (hypothetical protein SDJN02_05814 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 256 bits (653), Expect = 5.84e-84 Identity = 133/135 (98.52%), Postives = 134/135 (99.26%), Query Frame = 0
BLAST of Cp4.1LG02g03970 vs. NCBI nr
Match: KAG6608135.1 (hypothetical protein SDJN03_01477, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 254 bits (649), Expect = 4.86e-83 Identity = 132/134 (98.51%), Postives = 133/134 (99.25%), Query Frame = 0
BLAST of Cp4.1LG02g03970 vs. NCBI nr
Match: XP_023523262.1 (uncharacterized protein LOC111787510 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 254 bits (649), Expect = 5.02e-83 Identity = 132/134 (98.51%), Postives = 133/134 (99.25%), Query Frame = 0
BLAST of Cp4.1LG02g03970 vs. NCBI nr
Match: XP_022981042.1 (uncharacterized protein LOC111480308 isoform X2 [Cucurbita maxima]) HSP 1 Score: 253 bits (645), Expect = 1.91e-82 Identity = 131/134 (97.76%), Postives = 132/134 (98.51%), Query Frame = 0
BLAST of Cp4.1LG02g03970 vs. NCBI nr
Match: XP_022940407.1 (uncharacterized protein LOC111446021 [Cucurbita moschata]) HSP 1 Score: 252 bits (643), Expect = 3.84e-82 Identity = 131/134 (97.76%), Postives = 132/134 (98.51%), Query Frame = 0
BLAST of Cp4.1LG02g03970 vs. ExPASy TrEMBL
Match: A0A6J1ISW2 (uncharacterized protein LOC111480308 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111480308 PE=4 SV=1) HSP 1 Score: 253 bits (645), Expect = 9.23e-83 Identity = 131/134 (97.76%), Postives = 132/134 (98.51%), Query Frame = 0
BLAST of Cp4.1LG02g03970 vs. ExPASy TrEMBL
Match: A0A6J1FJI3 (uncharacterized protein LOC111446021 OS=Cucurbita moschata OX=3662 GN=LOC111446021 PE=4 SV=1) HSP 1 Score: 252 bits (643), Expect = 1.86e-82 Identity = 131/134 (97.76%), Postives = 132/134 (98.51%), Query Frame = 0
BLAST of Cp4.1LG02g03970 vs. ExPASy TrEMBL
Match: A0A6J1IVD4 (uncharacterized protein LOC111480308 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111480308 PE=4 SV=1) HSP 1 Score: 248 bits (633), Expect = 6.35e-81 Identity = 131/135 (97.04%), Postives = 132/135 (97.78%), Query Frame = 0
BLAST of Cp4.1LG02g03970 vs. ExPASy TrEMBL
Match: A0A0A0L0G9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G652680 PE=4 SV=1) HSP 1 Score: 202 bits (513), Expect = 8.06e-63 Identity = 111/139 (79.86%), Postives = 117/139 (84.17%), Query Frame = 0
BLAST of Cp4.1LG02g03970 vs. ExPASy TrEMBL
Match: A0A5A7VE69 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G001010 PE=4 SV=1) HSP 1 Score: 197 bits (501), Expect = 7.39e-61 Identity = 109/141 (77.30%), Postives = 116/141 (82.27%), Query Frame = 0
BLAST of Cp4.1LG02g03970 vs. TAIR 10
Match: AT4G32030.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 87.4 bits (215), Expect = 9.4e-18 Identity = 57/131 (43.51%), Postives = 77/131 (58.78%), Query Frame = 0
BLAST of Cp4.1LG02g03970 vs. TAIR 10
Match: AT4G32030.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80610.1); Has 63 Blast hits to 59 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). ) HSP 1 Score: 85.9 bits (211), Expect = 2.7e-17 Identity = 56/130 (43.08%), Postives = 76/130 (58.46%), Query Frame = 0
BLAST of Cp4.1LG02g03970 vs. TAIR 10
Match: AT1G15800.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80610.1); Has 56 Blast hits to 52 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 68.2 bits (165), Expect = 5.9e-12 Identity = 52/119 (43.70%), Postives = 65/119 (54.62%), Query Frame = 0
BLAST of Cp4.1LG02g03970 vs. TAIR 10
Match: AT1G80610.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15800.1); Has 73 Blast hits to 69 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 55; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). ) HSP 1 Score: 55.8 bits (133), Expect = 3.0e-08 Identity = 45/106 (42.45%), Postives = 54/106 (50.94%), Query Frame = 0
BLAST of Cp4.1LG02g03970 vs. TAIR 10
Match: AT5G25210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32030.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 42.7 bits (99), Expect = 2.7e-04 Identity = 37/107 (34.58%), Postives = 48/107 (44.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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