Cp4.1LG02g03770 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG02g03770
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	transcription factor bHLH93-like
Location	Cp4.1LG02: 2842059 .. 2843688 (+)
RNA-Seq Expression	Cp4.1LG02g03770
Synteny	Cp4.1LG02g03770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAAAAAAAAAATGGAGTTGAATGAACACTGTTTGTTAGATGAACTTCAAGCTTTGAGAAGAGAAATTAATTGGGAATTAGCAATGCCCACTGAAATTAACGAGCTAATCTCCACTGCTAATGGCTGGAATTTTGATTGCTCTGATTCTTTCCCCTTTTCTTTACCTATTGACCACCAGGATTTTGGCTATCTTCTCGGCGGCGAAGACGACTATTCTTTTTCCGGCGGCCAGTTCACGGCGGCTCCGAGTACCGGCGATTCGATGTCGTACACTACGTTCGAGACTACGCCGGGGGGTTTCGGTAGGTGTCCGGTTGTGGAAGAGGAGGATGAGATTCCGAATCTTGAAGTTCTGGGTAGTTGTAAAATGGAGCCGGCTTATTCCCCTGAAATTGCTCCGGTTTTCAACGCCGGTGGCACGTGCGATTTTGGCCAAAAGATCGTTGGTTCGGCGAGTAAGAAGCTTCAGGGGAAGCCGTCGAAGAATCTCATGGCGGAGAGACGGCGGAGGAAGCGGCTTAATGATCGCCTCTCCATGCTCCGATCCATCGTCCCCAAAATCAGCAAGGTATTTTAAATAATTTTGTTTAACTATGACTATTAATTAATTTAAAAAAAAAAAAAAAAAAAAAAAAAATTCAAGCAAGGATCTTAACTCAGTCTCAAACACGTCCGCCCCATAGAGACATCTTCCGTGCTTTTCGAGGCGCTGCGTGTGACTCAGCATGGGAGAAGGGGTCGGAACTGCACACTTTTGTGTTCAGAGCATTGAGCTACAATTTATATTATATCAGTCGTGAATTATAGTTCACCGTATATATCATATTATATCAATTTATTCCTAAATTACTTTATTTTCCATATTTTTATAATTTAGAGGTGGATTTAGCAAATATTCTCATGTTATTTCATAATTAGATGGATAGGACTGCGATTCTTGCGGATTCAATCGATTACGTGAAGGAATTGCTCGAGAAAATCAACCATTTGCAAAGGGAGATTGAAATGACGAATCCAAGTAAATCGGAGTCTATGGGGATTTTGAGAGCTGAGAAGCCGAGTGAATATTTGGTCAGAAATTCACCTAAGGTAATTAAGGGGAGATTAAGAGGTGATTAAGGCTTTGATTAGGGTTTTAATTATTGATTTGTGTTTGATTAATGCAGTTTAATGTGGAAAGGAGAGAAGGTGATACTCGGATTGAGATTTGCTGTGCGGCTAAGCCTGGCTTGTTGTTATCTACAGTGCACACTCTTGAAGCTTTAGGACTTGATATTCAGCAATGTGTCATTAGCTGCTTCAATGACTTCGCAATTCAAGCCTCCTGTTCCGAGGCACGTCTAAATCAAATTCCGTTAACTAATTGAGCTATGTTCACATTCGTCTCTTTAAAATTTGACCCAAAAAAATAGGGTTTTTCTTTAGCTCGAGCGTAAACGAAACATCGTTTTTTACCATAAACTATAGCTCGTAGATTGGTATTGGTGTTCGTAAGTGAAAACGTTTATTTGAATTCTAAAGCTAACTAGTTTTCGTGTTCGATGAAACAGGGAACGGAGCGGAGACCGGTTGAGGAAGTAAAACAAGCATTATTTGAAAATGCTGGATATGGAGGAAGATGTCTGTAG

mRNA sequence

AGAAAAAAAAAAATGGAGTTGAATGAACACTGTTTGTTAGATGAACTTCAAGCTTTGAGAAGAGAAATTAATTGGGAATTAGCAATGCCCACTGAAATTAACGAGCTAATCTCCACTGCTAATGGCTGGAATTTTGATTGCTCTGATTCTTTCCCCTTTTCTTTACCTATTGACCACCAGGATTTTGGCTATCTTCTCGGCGGCGAAGACGACTATTCTTTTTCCGGCGGCCAGTTCACGGCGGCTCCGAGTACCGGCGATTCGATGTCGTACACTACGTTCGAGACTACGCCGGGGGGTTTCGGTAGGTGTCCGGTTGTGGAAGAGGAGGATGAGATTCCGAATCTTGAAGTTCTGGGTAGTTGTAAAATGGAGCCGGCTTATTCCCCTGAAATTGCTCCGGTTTTCAACGCCGGTGGCACGTGCGATTTTGGCCAAAAGATCGTTGGTTCGGCGAGTAAGAAGCTTCAGGGGAAGCCGTCGAAGAATCTCATGGCGGAGAGACGGCGGAGGAAGCGGCTTAATGATCGCCTCTCCATGCTCCGATCCATCGTCCCCAAAATCAGCAAGATGGATAGGACTGCGATTCTTGCGGATTCAATCGATTACGTGAAGGAATTGCTCGAGAAAATCAACCATTTGCAAAGGGAGATTGAAATGACGAATCCAAGTAAATCGGAGTCTATGGGGATTTTGAGAGCTGAGAAGCCGAGTGAATATTTGGTCAGAAATTCACCTAAGTTTAATGTGGAAAGGAGAGAAGGTGATACTCGGATTGAGATTTGCTGTGCGGCTAAGCCTGGCTTGTTGTTATCTACAGTGCACACTCTTGAAGCTTTAGGACTTGATATTCAGCAATGTGGAACGGAGCGGAGACCGGTTGAGGAAGTAAAACAAGCATTATTTGAAAATGCTGGATATGGAGGAAGATGTCTGTAG

Coding sequence (CDS)

AGAAAAAAAAAAATGGAGTTGAATGAACACTGTTTGTTAGATGAACTTCAAGCTTTGAGAAGAGAAATTAATTGGGAATTAGCAATGCCCACTGAAATTAACGAGCTAATCTCCACTGCTAATGGCTGGAATTTTGATTGCTCTGATTCTTTCCCCTTTTCTTTACCTATTGACCACCAGGATTTTGGCTATCTTCTCGGCGGCGAAGACGACTATTCTTTTTCCGGCGGCCAGTTCACGGCGGCTCCGAGTACCGGCGATTCGATGTCGTACACTACGTTCGAGACTACGCCGGGGGGTTTCGGTAGGTGTCCGGTTGTGGAAGAGGAGGATGAGATTCCGAATCTTGAAGTTCTGGGTAGTTGTAAAATGGAGCCGGCTTATTCCCCTGAAATTGCTCCGGTTTTCAACGCCGGTGGCACGTGCGATTTTGGCCAAAAGATCGTTGGTTCGGCGAGTAAGAAGCTTCAGGGGAAGCCGTCGAAGAATCTCATGGCGGAGAGACGGCGGAGGAAGCGGCTTAATGATCGCCTCTCCATGCTCCGATCCATCGTCCCCAAAATCAGCAAGATGGATAGGACTGCGATTCTTGCGGATTCAATCGATTACGTGAAGGAATTGCTCGAGAAAATCAACCATTTGCAAAGGGAGATTGAAATGACGAATCCAAGTAAATCGGAGTCTATGGGGATTTTGAGAGCTGAGAAGCCGAGTGAATATTTGGTCAGAAATTCACCTAAGTTTAATGTGGAAAGGAGAGAAGGTGATACTCGGATTGAGATTTGCTGTGCGGCTAAGCCTGGCTTGTTGTTATCTACAGTGCACACTCTTGAAGCTTTAGGACTTGATATTCAGCAATGTGGAACGGAGCGGAGACCGGTTGAGGAAGTAAAACAAGCATTATTTGAAAATGCTGGATATGGAGGAAGATGTCTGTAG

Protein sequence

RKKKMELNEHCLLDELQALRREINWELAMPTEINELISTANGWNFDCSDSFPFSLPIDHQDFGYLLGGEDDYSFSGGQFTAAPSTGDSMSYTTFETTPGGFGRCPVVEEEDEIPNLEVLGSCKMEPAYSPEIAPVFNAGGTCDFGQKIVGSASKKLQGKPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADSIDYVKELLEKINHLQREIEMTNPSKSESMGILRAEKPSEYLVRNSPKFNVERREGDTRIEICCAAKPGLLLSTVHTLEALGLDIQQCGTERRPVEEVKQALFENAGYGGRCL

Homology

[Close]

BLAST of Cp4.1LG02g03770 vs. ExPASy Swiss-Prot
Match: Q9LSL1 (Transcription factor bHLH93 OS=Arabidopsis thaliana OX=3702 GN=BHLH93 PE=1 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.5e-50
Identity = 112/183 (61.20%), Postives = 134/183 (73.22%), Query Frame = 0


Query: 153 SKKLQGKPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADSIDYVKELLEKIN 212
           SKKL+G+PSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRT+IL D+IDY+KELL+KIN
Sbjct: 169 SKKLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKIN 228

Query: 213 HLQREIE----MTNPSKSESMGILRAEKPSEYLVRNSPKFNVERREGDTRIEICCAAKPG 272
            LQ E +      N   S+  G L+    +E LVRNSPKF ++RR+ DTR++ICC+ KPG
Sbjct: 229 KLQDEEQELGNSNNSHHSKLFGDLKDLNANEPLVRNSPKFEIDRRDEDTRVDICCSPKPG 288

Query: 273 LLLSTVHTLEALGLDIQQC----------------GTERRPV---EEVKQALFENAGYGG 313
           LLLSTV+TLE LGL+I+QC                G E+R     E++KQALF NAGYGG
Sbjct: 289 LLLSTVNTLETLGLEIEQCVISCFSDFSLQASCSEGAEQRDFITSEDIKQALFRNAGYGG 348

[Close]

BLAST of Cp4.1LG02g03770 vs. ExPASy Swiss-Prot
Match: Q10S44 (Transcription factor BHLH3 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH3 PE=1 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 7.7e-44
Identity = 108/184 (58.70%), Postives = 124/184 (67.39%), Query Frame = 0


Query: 155 KLQGKPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADSIDYVKELLEKINHL 214
           KL G PSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRT+IL D+IDYVKEL E+I  L
Sbjct: 175 KLHGTPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYVKELTERIKTL 234

Query: 215 QREIEMTNPSKSESMGILRAEKPS------EYLVRNSPKFNVERR-EGDTRIEICCAAKP 274
           + EI +T     E + +L   K S      E LVRNS KF+VE R  G+TRIEICC A P
Sbjct: 235 EEEIGVT----PEELDLLNTMKDSSSGNNNEMLVRNSTKFDVENRGSGNTRIEICCPANP 294

Query: 275 GLLLSTVHTLEALGLDIQQCGTE----------------RRPV---EEVKQALFENAGYG 313
           G+LLSTV  LE LGL+I+QC                   +R V   +E+KQ LF +AGYG
Sbjct: 295 GVLLSTVSALEVLGLEIEQCVVSCFSDFGMQASCLQEDGKRQVVSTDEIKQTLFRSAGYG 354

[Close]

BLAST of Cp4.1LG02g03770 vs. ExPASy Swiss-Prot
Match: Q9LXA9 (Transcription factor bHLH61 OS=Arabidopsis thaliana OX=3702 GN=BHLH61 PE=2 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.7e-43
Identity = 104/180 (57.78%), Postives = 127/180 (70.56%), Query Frame = 0


Query: 152 ASKKLQGKPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADSIDYVKELLEKI 211
           ++KKL+G+PSKNLMAERRRRKRLNDRLS+LRSIVPKI+KMDRT+IL D+IDY+KELL+KI
Sbjct: 141 SNKKLEGQPSKNLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKELLDKI 200

Query: 212 NHLQREIEMTNPSKSESMGILRAEKPSEYLVRNSPKFNVERREGDTRIEICCAAKPGLLL 271
           N LQ E E    S S    ++     +E +VRNS KF V++RE +T I+ICC  KPGL++
Sbjct: 201 NKLQ-EDEQELGSNSHLSTLI----TNESMVRNSLKFEVDQREVNTHIDICCPTKPGLVV 260

Query: 272 STVHTLEALGLDIQQC-----------------GTERRPV--EEVKQALFENAGYGGRCL 313
           STV TLE LGL+I+QC                 G +R  V  E  KQAL  NAGYGGRCL
Sbjct: 261 STVSTLETLGLEIEQCVISCFSDFSLQASCFEVGEQRYMVTSEATKQALIRNAGYGGRCL 315

[Close]

BLAST of Cp4.1LG02g03770 vs. ExPASy Swiss-Prot
Match: Q336V8 (Basic helix-loop-helix protein 004 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH004 PE=2 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 8.3e-38
Identity = 106/218 (48.62%), Postives = 129/218 (59.17%), Query Frame = 0


Query: 129 SPEIAPVFNAGGTCDFGQKIVGSASKKLQ-GKPSKNLMAERRRRKRLNDRLSMLRSIVPK 188
           S E+AP+F  GG       +   + +  Q G PSKNLMAERRRRKRLNDRLSMLRS+VP+
Sbjct: 162 SGELAPMFVFGGGGGAAASVRPRSCRPPQPGAPSKNLMAERRRRKRLNDRLSMLRSVVPR 221

Query: 189 ISKMDRTAILADSIDYVKELLEKINHLQREIEMTNPSKSE----SMGILRAEKP------ 248
           ISKMDRT+IL D+I YVKEL+++I +LQ E    + S S     SM  L   KP      
Sbjct: 222 ISKMDRTSILGDTIGYVKELMDRIKNLQVEAATGDSSSSSTENLSMLKLNTLKPPPSSSS 281

Query: 249 --SEYLVRNSPKFNVERRE-GDTRIEICCAAKPGLLLSTVHTLEALGLDIQQCGTE---- 308
                L+RNS +F VERRE G TRIE+ CAA P LL ST+  LEALG++I+QC       
Sbjct: 282 GEETPLIRNSTRFEVERRENGSTRIEMACAAIPELLPSTLAALEALGVEIEQCVISCFDD 341

Query: 309 ----------------RRPVEEVKQALFENAGYGGRCL 313
                            R  EE+KQ LF +AGYG  CL
Sbjct: 342 FAMQASCLQDDKKREMTRDTEEIKQTLFRSAGYGDGCL 379

[Close]

BLAST of Cp4.1LG02g03770 vs. ExPASy Swiss-Prot
Match: Q9LPW3 (Transcription factor SCREAM2 OS=Arabidopsis thaliana OX=3702 GN=SCRM2 PE=1 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.4e-29
Identity = 82/189 (43.39%), Postives = 106/189 (56.08%), Query Frame = 0


Query: 155 KLQGKPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADSIDYVKELLEKINHL 214
           K +G P+KNLMAERRRRK+LNDRL MLRS+VPKISKMDR +IL D+IDY+KELL++IN L
Sbjct: 260 KKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDL 319

Query: 215 QREIEMTNPSKSESMGILRAEKPSEYLVR--------------NSPKFNVERREGD-TRI 274
             E+E T PS S    +    +   Y V+                P+  V  REG    I
Sbjct: 320 HTELESTPPSSSSLHPLTPTPQTLSYRVKEELCPSSSLPSPKGQQPRVEVRLREGKAVNI 379

Query: 275 EICCAAKPGLLLSTVHTLEALGLDIQ------------------QCGTERRPV-EEVKQA 310
            + C  +PGLLLST+  L+ LGLD+Q                  QC  +   + E++K  
Sbjct: 380 HMFCGRRPGLLLSTMRALDNLGLDVQQAVISCFNGFALDVFRAEQCQEDHDVLPEQIKAV 439

[Close]

BLAST of Cp4.1LG02g03770 vs. NCBI nr
Match: XP_023525294.1 (transcription factor bHLH93-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 610 bits (1574), Expect = 6.59e-220
Identity = 308/324 (95.06%), Postives = 308/324 (95.06%), Query Frame = 0


Query: 5   MELNEHCLLDELQALRREINWELAMPTEINELISTANGWNFDCSDSFPFSLPIDHQDFGY 64
           MELNEHCLLDELQALRREINWELAMPTEINELISTANGWNFDCSDSFPFSLPIDHQDFGY
Sbjct: 1   MELNEHCLLDELQALRREINWELAMPTEINELISTANGWNFDCSDSFPFSLPIDHQDFGY 60

Query: 65  LLGGEDDYSFSGGQFTAAPSTGDSMSYTTFETTPGGFGRCPVVEEEDEIPNLEVLGSCKM 124
           LLGGEDDYSFSGGQFTAAPSTGDSMSYTTFETTPGGFGRCPVVEEEDEIPNLEVLGSCKM
Sbjct: 61  LLGGEDDYSFSGGQFTAAPSTGDSMSYTTFETTPGGFGRCPVVEEEDEIPNLEVLGSCKM 120

Query: 125 EPAYSPEIAPVFNAGGTCDFGQKIVGSASKKLQGKPSKNLMAERRRRKRLNDRLSMLRSI 184
           EPAYSPEIAPVFNAGGTCDFGQKIVGSASKKLQGKPSKNLMAERRRRKRLNDRLSMLRSI
Sbjct: 121 EPAYSPEIAPVFNAGGTCDFGQKIVGSASKKLQGKPSKNLMAERRRRKRLNDRLSMLRSI 180

Query: 185 VPKISKMDRTAILADSIDYVKELLEKINHLQREIEMTNPSKSESMGILRAEKPSEYLVRN 244
           VPKISKMDRTAILADSIDYVKELLEKINHLQREIEMTNPSKSESMGILRAEKPSEYLVRN
Sbjct: 181 VPKISKMDRTAILADSIDYVKELLEKINHLQREIEMTNPSKSESMGILRAEKPSEYLVRN 240

Query: 245 SPKFNVERREGDTRIEICCAAKPGLLLSTVHTLEALGLDIQQC----------------G 304
           SPKFNVERREGDTRIEICCAAKPGLLLSTVHTLEALGLDIQQC                G
Sbjct: 241 SPKFNVERREGDTRIEICCAAKPGLLLSTVHTLEALGLDIQQCVISCFNDFAIQASCSEG 300

Query: 305 TERRPVEEVKQALFENAGYGGRCL 312
           TERRPVEEVKQALFENAGYGGRCL
Sbjct: 301 TERRPVEEVKQALFENAGYGGRCL 324

[Close]

BLAST of Cp4.1LG02g03770 vs. NCBI nr
Match: XP_023525295.1 (transcription factor bHLH93-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 592 bits (1526), Expect = 1.09e-212
Identity = 302/324 (93.21%), Postives = 302/324 (93.21%), Query Frame = 0


Query: 5   MELNEHCLLDELQALRREINWELAMPTEINELISTANGWNFDCSDSFPFSLPIDHQDFGY 64
           MELNEHCLLDELQALRREINWELAMPTEINELISTANGWNFDCSDSFPFSLPIDHQDFGY
Sbjct: 1   MELNEHCLLDELQALRREINWELAMPTEINELISTANGWNFDCSDSFPFSLPIDHQDFGY 60

Query: 65  LLGGEDDYSFSGGQFTAAPSTGDSMSYTTFETTPGGFGRCPVVEEEDEIPNLEVLGSCKM 124
           LLGGEDDYSFSGGQFTAAPSTGDSMSYTTFETTPGGFGRCPVVEEEDEIPNLEVLGSCKM
Sbjct: 61  LLGGEDDYSFSGGQFTAAPSTGDSMSYTTFETTPGGFGRCPVVEEEDEIPNLEVLGSCKM 120

Query: 125 EPAYSPEIAPVFNAGGTCDFGQKIVGSASKKLQGKPSKNLMAERRRRKRLNDRLSMLRSI 184
           EPAYSPEIAPVFNAGGTCDFGQKIVGSASKKLQGKPSKNLMAERRRRKRLNDRLSMLRSI
Sbjct: 121 EPAYSPEIAPVFNAGGTCDFGQKIVGSASKKLQGKPSKNLMAERRRRKRLNDRLSMLRSI 180

Query: 185 VPKISKMDRTAILADSIDYVKELLEKINHLQREIEMTNPSKSESMGILRAEKPSEYLVRN 244
           VPKISKMDRTAILADSIDYVKELLEKINHLQREIEMTNPSKSESMGILRAEKPSEYL   
Sbjct: 181 VPKISKMDRTAILADSIDYVKELLEKINHLQREIEMTNPSKSESMGILRAEKPSEYL--- 240

Query: 245 SPKFNVERREGDTRIEICCAAKPGLLLSTVHTLEALGLDIQQC----------------G 304
              FNVERREGDTRIEICCAAKPGLLLSTVHTLEALGLDIQQC                G
Sbjct: 241 ---FNVERREGDTRIEICCAAKPGLLLSTVHTLEALGLDIQQCVISCFNDFAIQASCSEG 300

Query: 305 TERRPVEEVKQALFENAGYGGRCL 312
           TERRPVEEVKQALFENAGYGGRCL
Sbjct: 301 TERRPVEEVKQALFENAGYGGRCL 318

[Close]

BLAST of Cp4.1LG02g03770 vs. NCBI nr
Match: XP_022981028.1 (transcription factor bHLH93-like [Cucurbita maxima])

HSP 1 Score: 585 bits (1507), Expect = 1.15e-209
Identity = 297/326 (91.10%), Postives = 301/326 (92.33%), Query Frame = 0


Query: 5   MELNEHCLLDELQALRREINWELAMPTEINELISTANGWNFDCSD--SFPFSLPIDHQDF 64
           MELNEHCLLDELQALRREINWELAMPTEIN+LISTANGWNFDCSD  SFPFSLPIDHQDF
Sbjct: 1   MELNEHCLLDELQALRREINWELAMPTEINDLISTANGWNFDCSDASSFPFSLPIDHQDF 60

Query: 65  GYLLGGEDDYSFSGGQFTAAPSTGDSMSYTTFETTPGGFGRCPVVEEEDEIPNLEVLGSC 124
           GYLL GEDDYSF  GQFTAAPSTGDSMSYTTFETTPGGFGRCPV+EEEDEIPNLEVLGSC
Sbjct: 61  GYLLCGEDDYSFPDGQFTAAPSTGDSMSYTTFETTPGGFGRCPVMEEEDEIPNLEVLGSC 120

Query: 125 KMEPAYSPEIAPVFNAGGTCDFGQKIVGSASKKLQGKPSKNLMAERRRRKRLNDRLSMLR 184
           KMEPAYSPEI PVFNAGGTCDFGQKIV SASKKLQGKPSKNLMAERRRRKRLNDRLSMLR
Sbjct: 121 KMEPAYSPEIVPVFNAGGTCDFGQKIVSSASKKLQGKPSKNLMAERRRRKRLNDRLSMLR 180

Query: 185 SIVPKISKMDRTAILADSIDYVKELLEKINHLQREIEMTNPSKSESMGILRAEKPSEYLV 244
           SIVPKISKMDRTAILADSIDYVKELLEKINHLQREIEM NPSK ESMGILRAEKPSEYLV
Sbjct: 181 SIVPKISKMDRTAILADSIDYVKELLEKINHLQREIEMANPSKLESMGILRAEKPSEYLV 240

Query: 245 RNSPKFNVERREGDTRIEICCAAKPGLLLSTVHTLEALGLDIQQC--------------- 304
           RNSPKF+VERREGDTRIEICCAAKPGLLLSTVHTLEALGLDIQQC               
Sbjct: 241 RNSPKFSVERREGDTRIEICCAAKPGLLLSTVHTLEALGLDIQQCVISCFNDFAIQASCS 300

Query: 305 -GTERRPVEEVKQALFENAGYGGRCL 312
            GTERRP+EEVKQALFENAGYGGRCL
Sbjct: 301 EGTERRPIEEVKQALFENAGYGGRCL 326

[Close]

BLAST of Cp4.1LG02g03770 vs. NCBI nr
Match: KAG7031754.1 (Transcription factor bHLH93, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 585 bits (1508), Expect = 1.47e-209
Identity = 300/342 (87.72%), Postives = 304/342 (88.89%), Query Frame = 0


Query: 5   MELNEHCLLDELQALRREINWELAMPTEINELISTANGWNFDCSDS--FPFSLPIDHQDF 64
           MELNEHCLLDELQALRREINWELAMPTEIN+LISTANGWNFDCSDS  FPFSLPID+QDF
Sbjct: 1   MELNEHCLLDELQALRREINWELAMPTEINDLISTANGWNFDCSDSSSFPFSLPIDYQDF 60

Query: 65  GYLLGGEDDYSFSGGQFTAAPSTGDSMSYTTFETTPGGFGRCPVVEEEDEIPNLEVLGSC 124
           GYLLGGEDDYSFSGGQFTAAPSTGDSMSYTTFETTPGGFGRCPV+EEEDEIPNLEVLGSC
Sbjct: 61  GYLLGGEDDYSFSGGQFTAAPSTGDSMSYTTFETTPGGFGRCPVMEEEDEIPNLEVLGSC 120

Query: 125 KMEPAYSPEIAPVFNAGGTCDFGQKIVGSASKKLQGKPSKNLMAERRRRKRLNDRLSMLR 184
           KMEPAYSPEIAPVFNAGGTCDFGQKIVGSASKKLQGKPSKNLMAERRRRKRLNDRLSMLR
Sbjct: 121 KMEPAYSPEIAPVFNAGGTCDFGQKIVGSASKKLQGKPSKNLMAERRRRKRLNDRLSMLR 180

Query: 185 SIVPKISKMDRTAILADSIDYVKELLEKINHLQREIEMTNPSKSESMGILRAEKPSEYLV 244
           SIVPKISKMDRTAILADSIDYVKELLEKINHLQREIEM NPSK ES GILRAE PSEYLV
Sbjct: 181 SIVPKISKMDRTAILADSIDYVKELLEKINHLQREIEMANPSKLESTGILRAENPSEYLV 240

Query: 245 RNSPKFNVERREGDTRIEICCAAKPGLLLSTVHTLEALGLDIQQC--------------- 304
           RN+PKFNVERREGDTRIEICCAAKPGLLLSTVHTLEALGLDIQQC               
Sbjct: 241 RNAPKFNVERREGDTRIEICCAAKPGLLLSTVHTLEALGLDIQQCVISCFNDFAIQASCS 300

Query: 305 -----------------GTERRPVEEVKQALFENAGYGGRCL 312
                            GTERRPVEEVKQALFENAGYGGRCL
Sbjct: 301 EARLNQILLTNRARFKFGTERRPVEEVKQALFENAGYGGRCL 342

[Close]

BLAST of Cp4.1LG02g03770 vs. NCBI nr
Match: XP_022940461.1 (transcription factor bHLH93-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 583 bits (1504), Expect = 3.31e-209
Identity = 296/326 (90.80%), Postives = 300/326 (92.02%), Query Frame = 0


Query: 5   MELNEHCLLDELQALRREINWELAMPTEINELISTANGWNFDCSDS--FPFSLPIDHQDF 64
           MELNEHCLLDEL+ALRREINWELAMPTEIN+LISTAN WNFDCSDS   PFSLPIDHQDF
Sbjct: 1   MELNEHCLLDELEALRREINWELAMPTEINDLISTANAWNFDCSDSSSLPFSLPIDHQDF 60

Query: 65  GYLLGGEDDYSFSGGQFTAAPSTGDSMSYTTFETTPGGFGRCPVVEEEDEIPNLEVLGSC 124
           GYLL GEDDYSFSGGQFTAAPSTGDSMSYTTFETTPGGFGRCPV+EEEDEIPNLEVLGSC
Sbjct: 61  GYLLAGEDDYSFSGGQFTAAPSTGDSMSYTTFETTPGGFGRCPVMEEEDEIPNLEVLGSC 120

Query: 125 KMEPAYSPEIAPVFNAGGTCDFGQKIVGSASKKLQGKPSKNLMAERRRRKRLNDRLSMLR 184
           KMEPAYSPEIAPVFNAGGTCDFGQKIVGSASKKLQGKPSKNLMAERRRRKRLNDRLSMLR
Sbjct: 121 KMEPAYSPEIAPVFNAGGTCDFGQKIVGSASKKLQGKPSKNLMAERRRRKRLNDRLSMLR 180

Query: 185 SIVPKISKMDRTAILADSIDYVKELLEKINHLQREIEMTNPSKSESMGILRAEKPSEYLV 244
           SIVPKISKMDRTAILADSIDYVKELLEKINHLQREIEM NPSK ES GILRAE PSEYLV
Sbjct: 181 SIVPKISKMDRTAILADSIDYVKELLEKINHLQREIEMANPSKLESTGILRAENPSEYLV 240

Query: 245 RNSPKFNVERREGDTRIEICCAAKPGLLLSTVHTLEALGLDIQQC--------------- 304
           RN+PKFNVERREGDTRIEICCAAKPGLLLSTVHTLEALGLDIQQC               
Sbjct: 241 RNAPKFNVERREGDTRIEICCAAKPGLLLSTVHTLEALGLDIQQCVISCFNDFAIQASCS 300

Query: 305 -GTERRPVEEVKQALFENAGYGGRCL 312
            GTERRPVEEVKQ LFENAGYGGRCL
Sbjct: 301 EGTERRPVEEVKQELFENAGYGGRCL 326

[Close]

BLAST of Cp4.1LG02g03770 vs. ExPASy TrEMBL
Match: A0A6J1J102 (transcription factor bHLH93-like OS=Cucurbita maxima OX=3661 GN=LOC111480299 PE=4 SV=1)

HSP 1 Score: 585 bits (1507), Expect = 5.59e-210
Identity = 297/326 (91.10%), Postives = 301/326 (92.33%), Query Frame = 0


Query: 5   MELNEHCLLDELQALRREINWELAMPTEINELISTANGWNFDCSD--SFPFSLPIDHQDF 64
           MELNEHCLLDELQALRREINWELAMPTEIN+LISTANGWNFDCSD  SFPFSLPIDHQDF
Sbjct: 1   MELNEHCLLDELQALRREINWELAMPTEINDLISTANGWNFDCSDASSFPFSLPIDHQDF 60

Query: 65  GYLLGGEDDYSFSGGQFTAAPSTGDSMSYTTFETTPGGFGRCPVVEEEDEIPNLEVLGSC 124
           GYLL GEDDYSF  GQFTAAPSTGDSMSYTTFETTPGGFGRCPV+EEEDEIPNLEVLGSC
Sbjct: 61  GYLLCGEDDYSFPDGQFTAAPSTGDSMSYTTFETTPGGFGRCPVMEEEDEIPNLEVLGSC 120

Query: 125 KMEPAYSPEIAPVFNAGGTCDFGQKIVGSASKKLQGKPSKNLMAERRRRKRLNDRLSMLR 184
           KMEPAYSPEI PVFNAGGTCDFGQKIV SASKKLQGKPSKNLMAERRRRKRLNDRLSMLR
Sbjct: 121 KMEPAYSPEIVPVFNAGGTCDFGQKIVSSASKKLQGKPSKNLMAERRRRKRLNDRLSMLR 180

Query: 185 SIVPKISKMDRTAILADSIDYVKELLEKINHLQREIEMTNPSKSESMGILRAEKPSEYLV 244
           SIVPKISKMDRTAILADSIDYVKELLEKINHLQREIEM NPSK ESMGILRAEKPSEYLV
Sbjct: 181 SIVPKISKMDRTAILADSIDYVKELLEKINHLQREIEMANPSKLESMGILRAEKPSEYLV 240

Query: 245 RNSPKFNVERREGDTRIEICCAAKPGLLLSTVHTLEALGLDIQQC--------------- 304
           RNSPKF+VERREGDTRIEICCAAKPGLLLSTVHTLEALGLDIQQC               
Sbjct: 241 RNSPKFSVERREGDTRIEICCAAKPGLLLSTVHTLEALGLDIQQCVISCFNDFAIQASCS 300

Query: 305 -GTERRPVEEVKQALFENAGYGGRCL 312
            GTERRP+EEVKQALFENAGYGGRCL
Sbjct: 301 EGTERRPIEEVKQALFENAGYGGRCL 326

[Close]

BLAST of Cp4.1LG02g03770 vs. ExPASy TrEMBL
Match: A0A6J1FIJ3 (transcription factor bHLH93-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446053 PE=4 SV=1)

HSP 1 Score: 583 bits (1504), Expect = 1.60e-209
Identity = 296/326 (90.80%), Postives = 300/326 (92.02%), Query Frame = 0


Query: 5   MELNEHCLLDELQALRREINWELAMPTEINELISTANGWNFDCSDS--FPFSLPIDHQDF 64
           MELNEHCLLDEL+ALRREINWELAMPTEIN+LISTAN WNFDCSDS   PFSLPIDHQDF
Sbjct: 1   MELNEHCLLDELEALRREINWELAMPTEINDLISTANAWNFDCSDSSSLPFSLPIDHQDF 60

Query: 65  GYLLGGEDDYSFSGGQFTAAPSTGDSMSYTTFETTPGGFGRCPVVEEEDEIPNLEVLGSC 124
           GYLL GEDDYSFSGGQFTAAPSTGDSMSYTTFETTPGGFGRCPV+EEEDEIPNLEVLGSC
Sbjct: 61  GYLLAGEDDYSFSGGQFTAAPSTGDSMSYTTFETTPGGFGRCPVMEEEDEIPNLEVLGSC 120

Query: 125 KMEPAYSPEIAPVFNAGGTCDFGQKIVGSASKKLQGKPSKNLMAERRRRKRLNDRLSMLR 184
           KMEPAYSPEIAPVFNAGGTCDFGQKIVGSASKKLQGKPSKNLMAERRRRKRLNDRLSMLR
Sbjct: 121 KMEPAYSPEIAPVFNAGGTCDFGQKIVGSASKKLQGKPSKNLMAERRRRKRLNDRLSMLR 180

Query: 185 SIVPKISKMDRTAILADSIDYVKELLEKINHLQREIEMTNPSKSESMGILRAEKPSEYLV 244
           SIVPKISKMDRTAILADSIDYVKELLEKINHLQREIEM NPSK ES GILRAE PSEYLV
Sbjct: 181 SIVPKISKMDRTAILADSIDYVKELLEKINHLQREIEMANPSKLESTGILRAENPSEYLV 240

Query: 245 RNSPKFNVERREGDTRIEICCAAKPGLLLSTVHTLEALGLDIQQC--------------- 304
           RN+PKFNVERREGDTRIEICCAAKPGLLLSTVHTLEALGLDIQQC               
Sbjct: 241 RNAPKFNVERREGDTRIEICCAAKPGLLLSTVHTLEALGLDIQQCVISCFNDFAIQASCS 300

Query: 305 -GTERRPVEEVKQALFENAGYGGRCL 312
            GTERRPVEEVKQ LFENAGYGGRCL
Sbjct: 301 EGTERRPVEEVKQELFENAGYGGRCL 326

[Close]

BLAST of Cp4.1LG02g03770 vs. ExPASy TrEMBL
Match: A0A6J1FJN9 (transcription factor bHLH93-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111446053 PE=4 SV=1)

HSP 1 Score: 543 bits (1398), Expect = 1.82e-193
Identity = 272/285 (95.44%), Postives = 276/285 (96.84%), Query Frame = 0


Query: 5   MELNEHCLLDELQALRREINWELAMPTEINELISTANGWNFDCSDS--FPFSLPIDHQDF 64
           MELNEHCLLDEL+ALRREINWELAMPTEIN+LISTAN WNFDCSDS   PFSLPIDHQDF
Sbjct: 1   MELNEHCLLDELEALRREINWELAMPTEINDLISTANAWNFDCSDSSSLPFSLPIDHQDF 60

Query: 65  GYLLGGEDDYSFSGGQFTAAPSTGDSMSYTTFETTPGGFGRCPVVEEEDEIPNLEVLGSC 124
           GYLL GEDDYSFSGGQFTAAPSTGDSMSYTTFETTPGGFGRCPV+EEEDEIPNLEVLGSC
Sbjct: 61  GYLLAGEDDYSFSGGQFTAAPSTGDSMSYTTFETTPGGFGRCPVMEEEDEIPNLEVLGSC 120

Query: 125 KMEPAYSPEIAPVFNAGGTCDFGQKIVGSASKKLQGKPSKNLMAERRRRKRLNDRLSMLR 184
           KMEPAYSPEIAPVFNAGGTCDFGQKIVGSASKKLQGKPSKNLMAERRRRKRLNDRLSMLR
Sbjct: 121 KMEPAYSPEIAPVFNAGGTCDFGQKIVGSASKKLQGKPSKNLMAERRRRKRLNDRLSMLR 180

Query: 185 SIVPKISKMDRTAILADSIDYVKELLEKINHLQREIEMTNPSKSESMGILRAEKPSEYLV 244
           SIVPKISKMDRTAILADSIDYVKELLEKINHLQREIEM NPSK ES GILRAE PSEYLV
Sbjct: 181 SIVPKISKMDRTAILADSIDYVKELLEKINHLQREIEMANPSKLESTGILRAENPSEYLV 240

Query: 245 RNSPKFNVERREGDTRIEICCAAKPGLLLSTVHTLEALGLDIQQC 287
           RN+PKFNVERREGDTRIEICCAAKPGLLLSTVHTLEALGLDIQQC
Sbjct: 241 RNAPKFNVERREGDTRIEICCAAKPGLLLSTVHTLEALGLDIQQC 285

[Close]

BLAST of Cp4.1LG02g03770 vs. ExPASy TrEMBL
Match: A0A6J1IE22 (transcription factor bHLH93-like OS=Cucurbita maxima OX=3661 GN=LOC111476397 PE=4 SV=1)

HSP 1 Score: 342 bits (878), Expect = 1.83e-114
Identity = 212/335 (63.28%), Postives = 234/335 (69.85%), Query Frame = 0


Query: 5   MELNEHCLLDELQALRREINWELAMPTEINELISTANGWNFDCSDSFPFSLPIDHQDFGY 64
           MELNEH L +EL AL+REINWE AMPT+IN       GWNFDCSDS    + +D  +  Y
Sbjct: 1   MELNEHYLFEELLALKREINWEFAMPTDIN-------GWNFDCSDS----MAMDELNLSY 60

Query: 65  LLGGEDDYSFSGGQFTAAP--STGDSMSYTTFETTPGGFGRCPVVEEE-----DEIPNLE 124
           LL G+  YSF   QFTAA   STGDSMS   FE   G +    + EEE     DEI NLE
Sbjct: 61  LLNGQGQYSFPADQFTAAAAASTGDSMS---FEVYNGEYPIMNMEEEELGILEDEIHNLE 120

Query: 125 VLGSCKMEPAYSPE-IAPVFNAGGTCDFGQKIVGSASKKLQGKPSKNLMAERRRRKRLND 184
           V  +CK+E   SPE I P  NAG   DFGQKIV S  KKLQG+PSKNLMAERRRRKRLND
Sbjct: 121 VQANCKVEAVQSPEEIVP--NAG---DFGQKIVNSNRKKLQGQPSKNLMAERRRRKRLND 180

Query: 185 RLSMLRSIVPKISKMDRTAILADSIDYVKELLEKINHLQREIEMTN-PSKSESMGILRAE 244
           RLSMLRSIVPKISKMDRTAILAD+I+YVKEL+EKI +LQ EIE  N P+K   +GILR  
Sbjct: 181 RLSMLRSIVPKISKMDRTAILADAIEYVKELVEKIKNLQTEIEAGNDPNK---LGILRDL 240

Query: 245 KPSEYLVRNSPKFNVERREGDTRIEICCAAKPGLLLSTVHTLEALGLDIQQC-------- 304
           K +EY VRNS KFNVERREG+T IEICCAAKPGLLLSTV TLEALGLDIQ C        
Sbjct: 241 KRNEYSVRNSAKFNVERREGETGIEICCAAKPGLLLSTVQTLEALGLDIQHCVVSCFNDF 300

Query: 305 --------GTERRP---VEEVKQALFENAGYGGRC 311
                   G E+R     EEVKQALF+ AGYGGRC
Sbjct: 301 AIQASCSEGEEQRSRMSTEEVKQALFQTAGYGGRC 313

[Close]

BLAST of Cp4.1LG02g03770 vs. ExPASy TrEMBL
Match: A0A6J1F615 (transcription factor bHLH93-like OS=Cucurbita moschata OX=3662 GN=LOC111442673 PE=4 SV=1)

HSP 1 Score: 335 bits (860), Expect = 1.02e-111
Identity = 209/336 (62.20%), Postives = 232/336 (69.05%), Query Frame = 0


Query: 5   MELNEHCLLDELQALRREINWELAMPTEINELISTANGWNFDCSDSFPFSLPIDHQDFGY 64
           MELN+H L +EL AL+REI+WE AMPT+IN        WNFDCSDS    + +D  +  Y
Sbjct: 1   MELNQHYLFEELFALKREIDWEFAMPTDIN-------AWNFDCSDS----MTMDELNLSY 60

Query: 65  LLGGEDDYSFSGGQFTAAP---STGDSMSYTTFETTPGGFGRCPVVEEE-----DEIPNL 124
           LL  +  YSF   QFTAA    STGDSMS   FE   G +    + EEE     DEI NL
Sbjct: 61  LLNAQGQYSFPADQFTAAAAAASTGDSMS---FEVYNGEYPIMNMEEEELGILEDEIHNL 120

Query: 125 EVLGSCKMEPAYSPE-IAPVFNAGGTCDFGQKIVGSASKKLQGKPSKNLMAERRRRKRLN 184
           EV  +CK+E   SPE I P  NAG   D G KIV S  KKLQG+PSKNLMAERRRRKRLN
Sbjct: 121 EVQANCKVEAVQSPEEIVP--NAG---DLGPKIVNSNRKKLQGQPSKNLMAERRRRKRLN 180

Query: 185 DRLSMLRSIVPKISKMDRTAILADSIDYVKELLEKINHLQREIEMTN-PSKSESMGILRA 244
           DRLSMLRSIVPKISKMDRTAILAD+I+YVKEL+EKI +LQREIE  N P+K   +GILR 
Sbjct: 181 DRLSMLRSIVPKISKMDRTAILADAIEYVKELVEKITNLQREIEAGNDPNK---LGILRD 240

Query: 245 EKPSEYLVRNSPKFNVERREGDTRIEICCAAKPGLLLSTVHTLEALGLDIQQC------- 304
            K +EYLVRNS KFNVERREG T IEICCAAKPGLLLSTV TLEALGLDIQ C       
Sbjct: 241 LKRNEYLVRNSAKFNVERREGQTGIEICCAAKPGLLLSTVQTLEALGLDIQHCVVSCFND 300

Query: 305 ---------GTERR---PVEEVKQALFENAGYGGRC 311
                    G E+R     EEVKQALF+NAGYGGRC
Sbjct: 301 FAMQASCSEGEEQRRRMSTEEVKQALFQNAGYGGRC 314

[Close]

BLAST of Cp4.1LG02g03770 vs. TAIR 10
Match: AT5G65640.1 (beta HLH protein 93 )

HSP 1 Score: 201.4 bits (511), Expect = 1.0e-51
Identity = 112/183 (61.20%), Postives = 134/183 (73.22%), Query Frame = 0


Query: 153 SKKLQGKPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADSIDYVKELLEKIN 212
           SKKL+G+PSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRT+IL D+IDY+KELL+KIN
Sbjct: 169 SKKLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKIN 228

Query: 213 HLQREIE----MTNPSKSESMGILRAEKPSEYLVRNSPKFNVERREGDTRIEICCAAKPG 272
            LQ E +      N   S+  G L+    +E LVRNSPKF ++RR+ DTR++ICC+ KPG
Sbjct: 229 KLQDEEQELGNSNNSHHSKLFGDLKDLNANEPLVRNSPKFEIDRRDEDTRVDICCSPKPG 288

Query: 273 LLLSTVHTLEALGLDIQQC----------------GTERRPV---EEVKQALFENAGYGG 313
           LLLSTV+TLE LGL+I+QC                G E+R     E++KQALF NAGYGG
Sbjct: 289 LLLSTVNTLETLGLEIEQCVISCFSDFSLQASCSEGAEQRDFITSEDIKQALFRNAGYGG 348

[Close]

BLAST of Cp4.1LG02g03770 vs. TAIR 10
Match: AT5G10570.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 177.9 bits (450), Expect = 1.2e-44
Identity = 104/180 (57.78%), Postives = 127/180 (70.56%), Query Frame = 0


Query: 152 ASKKLQGKPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADSIDYVKELLEKI 211
           ++KKL+G+PSKNLMAERRRRKRLNDRLS+LRSIVPKI+KMDRT+IL D+IDY+KELL+KI
Sbjct: 141 SNKKLEGQPSKNLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKELLDKI 200

Query: 212 NHLQREIEMTNPSKSESMGILRAEKPSEYLVRNSPKFNVERREGDTRIEICCAAKPGLLL 271
           N LQ E E    S S    ++     +E +VRNS KF V++RE +T I+ICC  KPGL++
Sbjct: 201 NKLQ-EDEQELGSNSHLSTLI----TNESMVRNSLKFEVDQREVNTHIDICCPTKPGLVV 260

Query: 272 STVHTLEALGLDIQQC-----------------GTERRPV--EEVKQALFENAGYGGRCL 313
           STV TLE LGL+I+QC                 G +R  V  E  KQAL  NAGYGGRCL
Sbjct: 261 STVSTLETLGLEIEQCVISCFSDFSLQASCFEVGEQRYMVTSEATKQALIRNAGYGGRCL 315

[Close]

BLAST of Cp4.1LG02g03770 vs. TAIR 10
Match: AT1G12860.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 131.7 bits (330), Expect = 1.0e-30
Identity = 82/189 (43.39%), Postives = 106/189 (56.08%), Query Frame = 0


Query: 155 KLQGKPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADSIDYVKELLEKINHL 214
           K +G P+KNLMAERRRRK+LNDRL MLRS+VPKISKMDR +IL D+IDY+KELL++IN L
Sbjct: 260 KKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDL 319

Query: 215 QREIEMTNPSKSESMGILRAEKPSEYLVR--------------NSPKFNVERREGD-TRI 274
             E+E T PS S    +    +   Y V+                P+  V  REG    I
Sbjct: 320 HTELESTPPSSSSLHPLTPTPQTLSYRVKEELCPSSSLPSPKGQQPRVEVRLREGKAVNI 379

Query: 275 EICCAAKPGLLLSTVHTLEALGLDIQ------------------QCGTERRPV-EEVKQA 310
            + C  +PGLLLST+  L+ LGLD+Q                  QC  +   + E++K  
Sbjct: 380 HMFCGRRPGLLLSTMRALDNLGLDVQQAVISCFNGFALDVFRAEQCQEDHDVLPEQIKAV 439

[Close]

BLAST of Cp4.1LG02g03770 vs. TAIR 10
Match: AT3G26744.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 125.2 bits (313), Expect = 9.4e-29
Identity = 85/212 (40.09%), Postives = 110/212 (51.89%), Query Frame = 0


Query: 137 NAGGTCDFGQKIVGSASKKLQGKPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAI 196
           N  G      +I G    K +G P+KNLMAERRRRK+LNDRL MLRS+VPKISKMDR +I
Sbjct: 282 NESGKAAESVQIGGGGKGKKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASI 341

Query: 197 LADSIDYVKELLEKINHLQREIEMTNPSK-----------SESMGILRAEKPSEYLVRNS 256
           L D+IDY+KELL++IN L  E+E T P             + +   L      E    + 
Sbjct: 342 LGDAIDYLKELLQRINDLHNELESTPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSL 401

Query: 257 P-------KFNVERREG-DTRIEICCAAKPGLLLSTVHTLEALGLDIQQC---------- 310
           P       +  V  REG    I + C  +PGLLL+T+  L+ LGLD+QQ           
Sbjct: 402 PSPKGQQARVEVRLREGRAVNIHMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNGFAL 461

[Close]

BLAST of Cp4.1LG02g03770 vs. TAIR 10
Match: AT3G26744.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 125.2 bits (313), Expect = 9.4e-29
Identity = 85/212 (40.09%), Postives = 110/212 (51.89%), Query Frame = 0


Query: 137 NAGGTCDFGQKIVGSASKKLQGKPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAI 196
           N  G      +I G    K +G P+KNLMAERRRRK+LNDRL MLRS+VPKISKMDR +I
Sbjct: 282 NESGKAAESVQIGGGGKGKKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASI 341

Query: 197 LADSIDYVKELLEKINHLQREIEMTNPSK-----------SESMGILRAEKPSEYLVRNS 256
           L D+IDY+KELL++IN L  E+E T P             + +   L      E    + 
Sbjct: 342 LGDAIDYLKELLQRINDLHNELESTPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSL 401

Query: 257 P-------KFNVERREG-DTRIEICCAAKPGLLLSTVHTLEALGLDIQQC---------- 310
           P       +  V  REG    I + C  +PGLLL+T+  L+ LGLD+QQ           
Sbjct: 402 PSPKGQQARVEVRLREGRAVNIHMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNGFAL 461

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g03770 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSL1	1.5e-50	61.20	Transcription factor bHLH93 OS=Arabidopsis thaliana OX=3702 GN=BHLH93 PE=1 SV=1	[more]
Q10S44	7.7e-44	58.70	Transcription factor BHLH3 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH3 PE=...	[more]
Q9LXA9	1.7e-43	57.78	Transcription factor bHLH61 OS=Arabidopsis thaliana OX=3702 GN=BHLH61 PE=2 SV=1	[more]
Q336V8	8.3e-38	48.62	Basic helix-loop-helix protein 004 OS=Oryza sativa subsp. japonica OX=39947 GN=B...	[more]
Q9LPW3	1.4e-29	43.39	Transcription factor SCREAM2 OS=Arabidopsis thaliana OX=3702 GN=SCRM2 PE=1 SV=1	[more]

BLAST of Cp4.1LG02g03770 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023525294.1	6.59e-220	95.06	transcription factor bHLH93-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023525295.1	1.09e-212	93.21	transcription factor bHLH93-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022981028.1	1.15e-209	91.10	transcription factor bHLH93-like [Cucurbita maxima]	[more]
KAG7031754.1	1.47e-209	87.72	Transcription factor bHLH93, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]
XP_022940461.1	3.31e-209	90.80	transcription factor bHLH93-like isoform X1 [Cucurbita moschata]	[more]

BLAST of Cp4.1LG02g03770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J102	5.59e-210	91.10	transcription factor bHLH93-like OS=Cucurbita maxima OX=3661 GN=LOC111480299 PE=...	[more]
A0A6J1FIJ3	1.60e-209	90.80	transcription factor bHLH93-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1FJN9	1.82e-193	95.44	transcription factor bHLH93-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1IE22	1.83e-114	63.28	transcription factor bHLH93-like OS=Cucurbita maxima OX=3661 GN=LOC111476397 PE=...	[more]
A0A6J1F615	1.02e-111	62.20	transcription factor bHLH93-like OS=Cucurbita moschata OX=3662 GN=LOC111442673 P...	[more]

BLAST of Cp4.1LG02g03770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G65640.1	1.0e-51	61.20	beta HLH protein 93	[more]
AT5G10570.1	1.2e-44	57.78	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G12860.1	1.0e-30	43.39	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G26744.1	9.4e-29	40.09	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G26744.2	9.4e-29	40.09	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 2..22
None	No IPR available	COILS	Coil	Coil	coord: 197..217
None	No IPR available	PANTHER	PTHR31945:SF116	SUBFAMILY NOT NAMED	coord: 295..312 coord: 6..287
None	No IPR available	PANTHER	PTHR31945	TRANSCRIPTION FACTOR SCREAM2-RELATED	coord: 295..312 coord: 6..287
None	No IPR available	CDD	cd04873	ACT_UUR-ACR-like	coord: 257..285 e-value: 6.35337E-4 score: 35.6017
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 164..213 e-value: 1.1E-10 score: 51.5
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 164..207 e-value: 7.6E-9 score: 35.5
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 158..207 score: 14.843248
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 151..223 e-value: 1.6E-14 score: 55.5
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 161..225

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG02g03770.1	Cp4.1LG02g03770.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity