Cp4.1LG02g02300 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG02g02300
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionUnknown protein
LocationCp4.1LG02: 3980322 .. 3983188 (+)
RNA-Seq ExpressionCp4.1LG02g02300
SyntenyCp4.1LG02g02300
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCACAGGGTAGGAACCAAATTGTTAAACTTGATTATATCATATTCCCTTTCTCCATCTTCCGGTGGCTCTGCAACTCGAAATGAGCATGACGATGGGCGCTGCGATTACAATCATTATTGTGGCAGGTTCTCTTCTGCTATGGGGATGGAGCTTCCTCAACTGGATTTGGCTGAAACCGAAGAAGCTCGAGAAGCAGTTAAGAGAGCAGGGCCTTGCCGGAAATCCCTATCGCCTTCTCTTTGGCGATTCCAAGGACATGGCGACCGCGATTCGCGAAGCCAGATCCCAGTCCATCAACTTCTCTCATCATATCGCTCATCGCGCCCTCCCTTCCTCGCACCTCACCATCAATAAATACGGTAATCTCTTCCGTTCTTCTCCATTTTGTATTTGCCCTACCTGGATTCCGTTCTTGTCTAAACTCAAATAATTCTTTTGGGATCATTTTTATTTTTCAACTCAAATTTTGGCTGTTGTTAAACCTCATGTTCATCATGGTATCATCTATGTGTATACTTGGTTGGCTTCCTTGTATTCTTAACGCACTTATATTTGTAGGTAAGAATTGTTTCGCGTGGGTTGGACCAACTCCAAGAGTGTATATAACAGACCCTGAACAACTTAAGACTGTCTTTTCTCTCATCAATGACATTCCTAAAGCCCCTTTATTTCCTCCTGCAAGAACCCCCGGAAGTGGCGGACTTGTCTCTCTCGAGGGATCTAAATGGGCTCAACATAGAAAGATCATCAATCCCGCCTTTCATACCCAGAAGTTGAAGGTCTACTACACCCTCTCAATCCCTCTTTTTTCAAGTAGTTAAGATAGCACTTAAGACGACTAAGACAGCTTAGGGTGTTTGCAGGACATGTTTCCAGCGTTCTTTGAGAGTTGTAATGAGATGATTAACAAATGGGAAGTGATGGTCTCTGAGGAAGAAGAAGGGTGTTTCGAGTTAGATGTTTGGCCCGATTTGCAGAATATGACTGCAGATTCGATATCTCGAACAGCATTTGGGAGTAGCTATGAGGAAGGAAAGAAGATCTTCCAGTTTTTGAAAACCTGGGTTTCTTTATTGGTAGCACGCCTAACAAAGGGTGTCTATAACATTCCGGGATGGAGGTAAGATTTGAATGAATTTGAGCTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCATAATTAGTTCTTCATTTACTTTAGGTTTGTACCAACCCAGATGAATAGGAAGATGGAGGAGGTTAATAGAGAAATAAAAAGTATGGTTTGGGGAATTATAAGCAAGAGACAAGCGGCTATGGAGGCTGCTCAAGTTTCTAATAATGCTGATCTTCTTGGGATACTTTTGGAAGAAAATAAGAAAGATGCTGTTGGAATGTCTATGGAGGATATCATTAGTGAGTGCAAGCTTTTTTATTTTGCTGGCCAAGAAACGACGGCCTCGTTGCTTGTTTGGACGATGGTTCTACTTGGTCGGTATTCGGAATGGCAAGATCGAGCAAGAGCGGAAGTGCTTGATGTTTTTGGTGAAGACAAGAAAGTAGATTTTGATGGTTTAAATCGTCTCAAAGTAGTAAGTAGCTATGATTAATAGCTTTTTCTTTTCGTTCAACAACATAACGTGCTACGCACTTTTATAAGTCATCTCAAAGTAGTAAGTAGCTATGGTTTAATTCATCTCATGGCCAAGGAATCATTTTTTAATAAGGATGTGAAAACCACTCCCCTAGCGTTTAAAAGCCTTGGGGGTAAACCTGAAACTTCTCCCCTAGCGTCTTAAAGCCTTGGGGGTAAGCCCGAAACCGCTCCCCTAGCATCTTAAAGCCTTGGGGGTAAGCCCGAAACCTCTCCCTAGCGTCTTAAAGCCTTGAGAGGAAGCCCGAAACCTCTCCCTAGCATCTTAAAGCCTTGAGGGGAAGCCCGAAACCTCTCCTTAGCATCTCAAGGCCATGAGAGGAGCTCAAAACAGAAAAACCAAAGAGAGCAATCACTTTAAAGTAGTTTCGATCGGGTATGTTTTGATTACTTCCTGATTTACTTGGAACATGTTGATGTTTGGAACAGGTGAGTATGATACTATATGAAGTTCTCAGGTTATATCCTCCCGTTGGAATCTTAGCTCGAGGAATACACAAGGAAACAAAGCTTGGAAACTTGATATTGCCGGGTGGGGTGTCATTAGGCATACCAATCATTCATATCCACCACGATCACCAAATATGGGGTGAAGATGCAGATGAGTTCAAGCCAGAGAGGTTTTCAGAAGGAATTTCCAAAGCAACAAACAATAAAGTTTGCTTCCTACCATTTGGATGGGGTCCTCGAATTTGTGTTGGTCAAAACTTTGCCATGATTGAAGCAAAAATAGCACTATCAATGATTTTGCAGAGCTTCTCCTTCCAACTTTCCCCATCTTATACTCACTCTCCTGCTTCAAATGTCACTGTTCAACCACAACATGGAGCTCATCTCATCCTCCGTAAGCTCTAATAGTTTCAAAGTTCATATATCATTCCCTTTTTGTGTTGTATAAGTTATGTCTAATATAAATAACTCAATCATTCAGACATTATAATATACTTTGATTTAGCAAAAATAAAGTGTGTTCATAACATGAAATATAATACATTAAGAACATACCAAAAACATAATACAGAATTAAACGAACAAAAAGTTTAAAAAACAAAGCTCAAATTCTGAAAAGCATTAAACCCAGATCAAGCTCATACATTGAACAAAAATGCAAGACAGATCGACCAAGTTCAATCCATAATCTTAACCTGAAATTAGTATATACTCATTTTCTCAATCTACAGAATCGAATCATAGTGATGGTACCAAACGGATATCCAACAGTTACAAAT

mRNA sequence

TCCACAGGGTAGGAACCAAATTGTTAAACTTGATTATATCATATTCCCTTTCTCCATCTTCCGGTGGCTCTGCAACTCGAAATGAGCATGACGATGGGCGCTGCGATTACAATCATTATTGTGGCAGGTTCTCTTCTGCTATGGGGATGGAGCTTCCTCAACTGGATTTGGCTGAAACCGAAGAAGCTCGAGAAGCAGTTAAGAGAGCAGGGCCTTGCCGGAAATCCCTATCGCCTTCTCTTTGGCGATTCCAAGGACATGGCGACCGCGATTCGCGAAGCCAGATCCCAGTCCATCAACTTCTCTCATCATATCGCTCATCGCGCCCTCCCTTCCTCGCACCTCACCATCAATAAATACGAATCGAATCATAGTGATGGTACCAAACGGATATCCAACAGTTACAAAT

Coding sequence (CDS)

ATGGGGATGGAGCTTCCTCAACTGGATTTGGCTGAAACCGAAGAAGCTCGAGAAGCAGTTAAGAGAGCAGGGCCTTGCCGGAAATCCCTATCGCCTTCTCTTTGGCGATTCCAAGGACATGGCGACCGCGATTCGCGAAGCCAGATCCCAGTCCATCAACTTCTCTCATCATATCGCTCATCGCGCCCTCCCTTCCTCGCACCTCACCATCAATAA

Protein sequence

MGMELPQLDLAETEEAREAVKRAGPCRKSLSPSLWRFQGHGDRDSRSQIPVHQLLSSYRSSRPPFLAPHHQ
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 10..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG02g02300.1Cp4.1LG02g02300.1mRNA