Cp4.1LG02g01620 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG02g01620
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	NAC domain-containing protein
Location	Cp4.1LG02: 4530967 .. 4531557 (-)
RNA-Seq Expression	Cp4.1LG02g01620
Synteny	Cp4.1LG02g01620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATATGGAGAAATTAAAGTCGGCGCCGGAGGCCGATTCAGAGCGGCCGAACCTGCCACCGGGGTTCCGGTTCCACCCGACCGACGAGGAGCTGGTGGTTCACTATCTAAAGAAGAAGGCCACTTCACAGCCCTTGCCGGCGGCCATCATCGCCGATGTTGACCTGTACAAGTACGATCCTTGGGAGCTTCCAGGTGTGTTTTTCGCCGGAGTGAGTTCCGTCGACAGAGGCTAAAACTGGGATTTTTAGTAAAATTAGTCAAGTTTTGATTTTTTGTTTGCGGTGAAAATTTCAGCAAAGGCTAATTATGGAGAACAAGAATGGTATTTTTTCAGTCCACGAGATCGAAAGTATCCGAACGGAGCTCGGCCTAATCGAGCTACCGCGTCCGGGTATTGGAAGGCGACAGGAACCAATAAGCCGGTGATTGCTTCGTTAGAAGGGAACCCGAAAGTTGGTGTTAAGAAGGCTTTGATTTTTTACCATGGAAAGTCACCGAAAGGAATCAAAACCAATTGGATCATGCACGAGTATCGCTTAGTCGATTACAAACACGACCGCGGCAAAAAAAACTCATTGAGGGTATGA

mRNA sequence

ATGAATATGGAGAAATTAAAGTCGGCGCCGGAGGCCGATTCAGAGCGGCCGAACCTGCCACCGGGGTTCCGGTTCCACCCGACCGACGAGGAGCTGGTGGTTCACTATCTAAAGAAGAAGGCCACTTCACAGCCCTTGCCGGCGGCCATCATCGCCGATGTTGACCTGTACAAGTACGATCCTTGGGAGCTTCCAGCAAAGGCTAATTATGGAGAACAAGAATGGTATTTTTTCAGTCCACGAGATCGAAAGTATCCGAACGGAGCTCGGCCTAATCGAGCTACCGCGTCCGGGTATTGGAAGGCGACAGGAACCAATAAGCCGGTGATTGCTTCGTTAGAAGGGAACCCGAAAGTTGGTGTTAAGAAGGCTTTGATTTTTTACCATGGAAAGTCACCGAAAGGAATCAAAACCAATTGGATCATGCACGAGTATCGCTTAGTCGATTACAAACACGACCGCGGCAAAAAAAACTCATTGAGGGTATGA

Coding sequence (CDS)

ATGAATATGGAGAAATTAAAGTCGGCGCCGGAGGCCGATTCAGAGCGGCCGAACCTGCCACCGGGGTTCCGGTTCCACCCGACCGACGAGGAGCTGGTGGTTCACTATCTAAAGAAGAAGGCCACTTCACAGCCCTTGCCGGCGGCCATCATCGCCGATGTTGACCTGTACAAGTACGATCCTTGGGAGCTTCCAGCAAAGGCTAATTATGGAGAACAAGAATGGTATTTTTTCAGTCCACGAGATCGAAAGTATCCGAACGGAGCTCGGCCTAATCGAGCTACCGCGTCCGGGTATTGGAAGGCGACAGGAACCAATAAGCCGGTGATTGCTTCGTTAGAAGGGAACCCGAAAGTTGGTGTTAAGAAGGCTTTGATTTTTTACCATGGAAAGTCACCGAAAGGAATCAAAACCAATTGGATCATGCACGAGTATCGCTTAGTCGATTACAAACACGACCGCGGCAAAAAAAACTCATTGAGGGTATGA

Protein sequence

MNMEKLKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLYKYDPWELPAKANYGEQEWYFFSPRDRKYPNGARPNRATASGYWKATGTNKPVIASLEGNPKVGVKKALIFYHGKSPKGIKTNWIMHEYRLVDYKHDRGKKNSLRV

Homology

[Close]

BLAST of Cp4.1LG02g01620 vs. ExPASy Swiss-Prot
Match: Q9LD44 (NAC transcription factor 56 OS=Arabidopsis thaliana OX=3702 GN=NAC056 PE=2 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 2.9e-66
Identity = 120/168 (71.43%), Postives = 138/168 (82.14%), Query Frame = 0


Query: 3   MEKLKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLYKYDPW 62
           ME   S+      +PNLPPGFRFHPTDEELVVHYLK+KA S PLP AIIA+VDLYK+DPW
Sbjct: 1   MESTDSSGGPPPPQPNLPPGFRFHPTDEELVVHYLKRKAASAPLPVAIIAEVDLYKFDPW 60

Query: 63  ELPAKANYGEQEWYFFSPRDRKYPNGARPNRATASGYWKATGTNKPVIASLEGNPKVGVK 122
           ELPAKA++GEQEWYFFSPRDRKYPNGARPNRA  SGYWKATGT+KPV+AS +GN KVGVK
Sbjct: 61  ELPAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLAS-DGNQKVGVK 120

Query: 123 KALIFYHGKSPKGIKTNWIMHEYRLVDYKHDR--------GKKNSLRV 163
           KAL+FY GK PKG+K++WIMHEYRL++ K +          KKNSLR+
Sbjct: 121 KALVFYSGKPPKGVKSDWIMHEYRLIENKPNNRPPGCDFGNKKNSLRL 167

[Close]

BLAST of Cp4.1LG02g01620 vs. ExPASy Swiss-Prot
Match: Q9ZNU2 (NAC domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=NAC018 PE=2 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 1.2e-64
Identity = 119/166 (71.69%), Postives = 135/166 (81.33%), Query Frame = 0


Query: 3   MEKLKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLYKYDPW 62
           ME   S+      +PNLPPGFRFHPTDEELV+HYLK+KA S PLP AIIADVDLYK+DPW
Sbjct: 1   MESTDSSGGPPPPQPNLPPGFRFHPTDEELVIHYLKRKADSVPLPVAIIADVDLYKFDPW 60

Query: 63  ELPAKANYGEQEWYFFSPRDRKYPNGARPNRATASGYWKATGTNKPVIAS-LEGNPKVGV 122
           ELPAKA++GEQEWYFFSPRDRKYPNGARPNRA  SGYWKATGT+KPVI++   G+ KVGV
Sbjct: 61  ELPAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVISTGGGGSKKVGV 120

Query: 123 KKALIFYHGKSPKGIKTNWIMHEYRLVDYKHDR-----GKKNSLRV 163
           KKAL+FY GK PKG+K++WIMHEYRL D K         KKNSLR+
Sbjct: 121 KKALVFYSGKPPKGVKSDWIMHEYRLTDNKPTHICDFGNKKNSLRL 166

[Close]

BLAST of Cp4.1LG02g01620 vs. ExPASy Swiss-Prot
Match: A2YMR0 (NAC transcription factor ONAC010 OS=Oryza sativa subsp. indica OX=39946 GN=ONAC010 PE=3 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 1.3e-63
Identity = 110/144 (76.39%), Postives = 120/144 (83.33%), Query Frame = 0


Query: 6   LKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLYKYDPWELP 65
           L+   +     P LPPGFRFHPTDEELVVHYLKKKA S PLP  IIA+VDLYK+DPWELP
Sbjct: 16  LRRQQQQPGSAPELPPGFRFHPTDEELVVHYLKKKAASVPLPVTIIAEVDLYKFDPWELP 75

Query: 66  AKANYGEQEWYFFSPRDRKYPNGARPNRATASGYWKATGTNKPVIASLEGNPKVGVKKAL 125
            KAN+GEQEWYFFSPRDRKYPNGARPNRA  SGYWKATGT+KP++AS     KVGVKKAL
Sbjct: 76  EKANFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPIMASGSTREKVGVKKAL 135

Query: 126 IFYHGKSPKGIKTNWIMHEYRLVD 150
           +FY GK PKG+KTNWIMHEYRL D
Sbjct: 136 VFYRGKPPKGVKTNWIMHEYRLTD 159

[Close]

BLAST of Cp4.1LG02g01620 vs. ExPASy Swiss-Prot
Match: Q8H4S4 (NAC domain-containing protein 10 OS=Oryza sativa subsp. japonica OX=39947 GN=NAC010 PE=2 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 6.6e-63
Identity = 108/144 (75.00%), Postives = 120/144 (83.33%), Query Frame = 0


Query: 6   LKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLYKYDPWELP 65
           L+   +     P LPPGFRFHPTDEELVVHYLKKKA S PLP  IIA+VDLYK+DPW+LP
Sbjct: 16  LRRQQQQPGSAPELPPGFRFHPTDEELVVHYLKKKAASVPLPVTIIAEVDLYKFDPWDLP 75

Query: 66  AKANYGEQEWYFFSPRDRKYPNGARPNRATASGYWKATGTNKPVIASLEGNPKVGVKKAL 125
            KAN+GEQEWYFFSPRDRKYPNGARPNRA  SGYWKATGT+KP+++S     KVGVKKAL
Sbjct: 76  EKANFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPIMSSGSTREKVGVKKAL 135

Query: 126 IFYHGKSPKGIKTNWIMHEYRLVD 150
           +FY GK PKG+KTNWIMHEYRL D
Sbjct: 136 VFYRGKPPKGVKTNWIMHEYRLTD 159

[Close]

BLAST of Cp4.1LG02g01620 vs. ExPASy Swiss-Prot
Match: A0SPJ6 (NAC transcription factor NAM-B2 OS=Triticum turgidum subsp. durum OX=4567 GN=NAM-B2 PE=2 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 1.1e-62
Identity = 108/140 (77.14%), Postives = 116/140 (82.86%), Query Frame = 0


Query: 10  PEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLYKYDPWELPAKAN 69
           P      P LPPGFRFHPTDEELVVHYLKKKA   PLP  II +VDLYK+DPWELP KA 
Sbjct: 19  PPQQGSAPELPPGFRFHPTDEELVVHYLKKKAAKVPLPVTIITEVDLYKFDPWELPEKAT 78

Query: 70  YGEQEWYFFSPRDRKYPNGARPNRATASGYWKATGTNKPVIASLEGNPKVGVKKALIFYH 129
           +GEQEWYFFSPRDRKYPNGARPNRA  SGYWKATGT+KP++AS  G  KVGVKKAL+FY 
Sbjct: 79  FGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILASGCGREKVGVKKALVFYR 138

Query: 130 GKSPKGIKTNWIMHEYRLVD 150
           GK PKG+KTNWIMHEYRL D
Sbjct: 139 GKPPKGLKTNWIMHEYRLTD 158

[Close]

BLAST of Cp4.1LG02g01620 vs. NCBI nr
Match: XP_023523396.1 (NAC transcription factor 56-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 342 bits (876), Expect = 3.12e-117
Identity = 161/162 (99.38%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MNMEKLKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLYKYD 60
           MNMEKLKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLYKYD
Sbjct: 1   MNMEKLKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLYKYD 60

Query: 61  PWELPAKANYGEQEWYFFSPRDRKYPNGARPNRATASGYWKATGTNKPVIASLEGNPKVG 120
           PWELPAKANYGEQEWYFFSPRDRKYPNGARPNRATASGYWKATGTNKPVIASLEGNPKVG
Sbjct: 61  PWELPAKANYGEQEWYFFSPRDRKYPNGARPNRATASGYWKATGTNKPVIASLEGNPKVG 120

Query: 121 VKKALIFYHGKSPKGIKTNWIMHEYRLVDYKHDRGKKNSLRV 162
           VKKALIFYHGKSPKGIKTNWIMHEYRLVDYKHDRGKKNSLR+
Sbjct: 121 VKKALIFYHGKSPKGIKTNWIMHEYRLVDYKHDRGKKNSLRL 162

[Close]

BLAST of Cp4.1LG02g01620 vs. NCBI nr
Match: KAG7037393.1 (NAC transcription factor 56, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 327 bits (837), Expect = 2.20e-111
Identity = 153/160 (95.62%), Postives = 158/160 (98.75%), Query Frame = 0


Query: 3   MEKLKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLYKYDPW 62
           MEKLKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLYKYDPW
Sbjct: 1   MEKLKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLYKYDPW 60

Query: 63  ELPAKANYGEQEWYFFSPRDRKYPNGARPNRATASGYWKATGTNKPVIASLEGNPKVGVK 122
           ELPAKANYGEQEWYFFSPRDRKYPNGARPNRAT SGYWKATGT+KPVIASLEGN KVGVK
Sbjct: 61  ELPAKANYGEQEWYFFSPRDRKYPNGARPNRATVSGYWKATGTDKPVIASLEGNRKVGVK 120

Query: 123 KALIFYHGKSPKGIKTNWIMHEYRLVDYKHDRGKKNSLRV 162
           KAL+FYHGKSPKGIKTNWIMHEYRLVD+KH+RGKKNSLR+
Sbjct: 121 KALVFYHGKSPKGIKTNWIMHEYRLVDFKHNRGKKNSLRL 160

[Close]

BLAST of Cp4.1LG02g01620 vs. NCBI nr
Match: XP_022941398.1 (LOW QUALITY PROTEIN: NAC transcription factor 56-like [Cucurbita moschata])

HSP 1 Score: 327 bits (837), Expect = 2.53e-111
Identity = 153/160 (95.62%), Postives = 158/160 (98.75%), Query Frame = 0


Query: 3   MEKLKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLYKYDPW 62
           MEKLKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLYKYDPW
Sbjct: 1   MEKLKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLYKYDPW 60

Query: 63  ELPAKANYGEQEWYFFSPRDRKYPNGARPNRATASGYWKATGTNKPVIASLEGNPKVGVK 122
           ELPAKANYGEQEWYFFSPRDRKYPNGARPNRAT SGYWKATGT+KPVIASLEGN KVGVK
Sbjct: 61  ELPAKANYGEQEWYFFSPRDRKYPNGARPNRATVSGYWKATGTDKPVIASLEGNRKVGVK 120

Query: 123 KALIFYHGKSPKGIKTNWIMHEYRLVDYKHDRGKKNSLRV 162
           KAL+FYHGKSPKGIK+NWIMHEYRLVDYKH+RGKKNSLR+
Sbjct: 121 KALVFYHGKSPKGIKSNWIMHEYRLVDYKHNRGKKNSLRL 160

[Close]

BLAST of Cp4.1LG02g01620 vs. NCBI nr
Match: KAG6607863.1 (NAC transcription factor, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 293 bits (750), Expect = 9.87e-100
Identity = 138/143 (96.50%), Postives = 140/143 (97.90%), Query Frame = 0


Query: 3   MEKLKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLYKYDPW 62
           MEKLKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDL KYDPW
Sbjct: 1   MEKLKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLNKYDPW 60

Query: 63  ELPAKANYGEQEWYFFSPRDRKYPNGARPNRATASGYWKATGTNKPVIASLEGNPKVGVK 122
           ELPAKANYGEQEWYFFSPRDRKYPNGARPNRAT SGYWKATGT+KPVIASLEGN KVGVK
Sbjct: 61  ELPAKANYGEQEWYFFSPRDRKYPNGARPNRATVSGYWKATGTDKPVIASLEGNRKVGVK 120

Query: 123 KALIFYHGKSPKGIKTNWIMHEY 145
           KAL+FYHGKSPKGIKTNWIMHEY
Sbjct: 121 KALVFYHGKSPKGIKTNWIMHEY 143

[Close]

BLAST of Cp4.1LG02g01620 vs. NCBI nr
Match: XP_004147807.1 (NAC transcription factor 56 [Cucumis sativus] >KGN59897.1 hypothetical protein Csa_000751 [Cucumis sativus])

HSP 1 Score: 283 bits (724), Expect = 3.08e-93
Identity = 139/172 (80.81%), Postives = 144/172 (83.72%), Query Frame = 0


Query: 3   MEKLKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLYKYDPW 62
           ME LKSA E DSERPNLPPGFRFHPTDEELVVHYLKKKATS PLP AIIA+VDLYKYDPW
Sbjct: 1   MENLKSAQETDSERPNLPPGFRFHPTDEELVVHYLKKKATSLPLPVAIIAEVDLYKYDPW 60

Query: 63  ELPAKANYGEQEWYFFSPRDRKYPNGARPNRATASGYWKATGTNKPVIASLEGNPKVGVK 122
           ELPAKA+YGEQEWYFFSPRDRKYPNGARPNRA  SGYWKATGT+KPVIAS EGN KVGVK
Sbjct: 61  ELPAKASYGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVIASSEGNRKVGVK 120

Query: 123 KALIFYHGKSPKGIKTNWIMHEYRLVDYKHDRG------------KKNSLRV 162
           KAL+FY GK PKGIKTNWIMHEYRL D K   G            KKNSLR+
Sbjct: 121 KALVFYGGKPPKGIKTNWIMHEYRLADNKSGGGNNNKPPGFNIGGKKNSLRL 172

[Close]

BLAST of Cp4.1LG02g01620 vs. ExPASy TrEMBL
Match: A0A6J1FS04 (LOW QUALITY PROTEIN: NAC transcription factor 56-like OS=Cucurbita moschata OX=3662 GN=LOC111446701 PE=4 SV=1)

HSP 1 Score: 327 bits (837), Expect = 1.23e-111
Identity = 153/160 (95.62%), Postives = 158/160 (98.75%), Query Frame = 0


Query: 3   MEKLKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLYKYDPW 62
           MEKLKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLYKYDPW
Sbjct: 1   MEKLKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLYKYDPW 60

Query: 63  ELPAKANYGEQEWYFFSPRDRKYPNGARPNRATASGYWKATGTNKPVIASLEGNPKVGVK 122
           ELPAKANYGEQEWYFFSPRDRKYPNGARPNRAT SGYWKATGT+KPVIASLEGN KVGVK
Sbjct: 61  ELPAKANYGEQEWYFFSPRDRKYPNGARPNRATVSGYWKATGTDKPVIASLEGNRKVGVK 120

Query: 123 KALIFYHGKSPKGIKTNWIMHEYRLVDYKHDRGKKNSLRV 162
           KAL+FYHGKSPKGIK+NWIMHEYRLVDYKH+RGKKNSLR+
Sbjct: 121 KALVFYHGKSPKGIKSNWIMHEYRLVDYKHNRGKKNSLRL 160

[Close]

BLAST of Cp4.1LG02g01620 vs. ExPASy TrEMBL
Match: A0A0A0LGE3 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G852460 PE=4 SV=1)

HSP 1 Score: 283 bits (724), Expect = 1.49e-93
Identity = 139/172 (80.81%), Postives = 144/172 (83.72%), Query Frame = 0


Query: 3   MEKLKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLYKYDPW 62
           ME LKSA E DSERPNLPPGFRFHPTDEELVVHYLKKKATS PLP AIIA+VDLYKYDPW
Sbjct: 1   MENLKSAQETDSERPNLPPGFRFHPTDEELVVHYLKKKATSLPLPVAIIAEVDLYKYDPW 60

Query: 63  ELPAKANYGEQEWYFFSPRDRKYPNGARPNRATASGYWKATGTNKPVIASLEGNPKVGVK 122
           ELPAKA+YGEQEWYFFSPRDRKYPNGARPNRA  SGYWKATGT+KPVIAS EGN KVGVK
Sbjct: 61  ELPAKASYGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVIASSEGNRKVGVK 120

Query: 123 KALIFYHGKSPKGIKTNWIMHEYRLVDYKHDRG------------KKNSLRV 162
           KAL+FY GK PKGIKTNWIMHEYRL D K   G            KKNSLR+
Sbjct: 121 KALVFYGGKPPKGIKTNWIMHEYRLADNKSGGGNNNKPPGFNIGGKKNSLRL 172

[Close]

BLAST of Cp4.1LG02g01620 vs. ExPASy TrEMBL
Match: A0A345BTH2 (NAC8 OS=Cucurbita pepo OX=3663 PE=2 SV=1)

HSP 1 Score: 275 bits (703), Expect = 1.65e-92
Identity = 136/171 (79.53%), Postives = 143/171 (83.63%), Query Frame = 0


Query: 3   MEKLKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLYKYDPW 62
           ME  KSAPE DS+RPNLPPGFRFHPTDEELVVHYLKKKATS PLP AIIA+VDLYKYDPW
Sbjct: 1   MESSKSAPEIDSDRPNLPPGFRFHPTDEELVVHYLKKKATSLPLPVAIIAEVDLYKYDPW 60

Query: 63  ELPAKANYGEQEWYFFSPRDRKYPNGARPNRATASGYWKATGTNKPVIASLEGNPKVGVK 122
           ELPAKA YGE+EWYFFSPRDRKYPNGARPNRA  SGYWKATGT+KPVIA  EGN KVGVK
Sbjct: 61  ELPAKACYGEEEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVIALSEGNRKVGVK 120

Query: 123 KALIFYHGKSPKGIKTNWIMHEYRLVDYKHDRG-----------KKNSLRV 162
           KAL+FY GK PKGIKTNWIMHEYRL D K D G           KK+S+RV
Sbjct: 121 KALVFYGGKPPKGIKTNWIMHEYRLAD-KPDSGNNKPPEFYIGSKKSSMRV 170

[Close]

BLAST of Cp4.1LG02g01620 vs. ExPASy TrEMBL
Match: B3SGL4 (NAC domain-containing protein 18-like OS=Cucumis melo OX=3656 GN=JA PE=2 SV=1)

HSP 1 Score: 280 bits (715), Expect = 3.46e-92
Identity = 138/172 (80.23%), Postives = 143/172 (83.14%), Query Frame = 0


Query: 3   MEKLKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLYKYDPW 62
           ME  KSA E DSERPNLPPGFRFHPTDEELVVHYLKKKATS PLP AIIA+VDLYKYDPW
Sbjct: 1   MENPKSALETDSERPNLPPGFRFHPTDEELVVHYLKKKATSLPLPVAIIAEVDLYKYDPW 60

Query: 63  ELPAKANYGEQEWYFFSPRDRKYPNGARPNRATASGYWKATGTNKPVIASLEGNPKVGVK 122
           ELPAKA+YGEQEWYFFSPRDRKYPNGARPNRA  SGYWKATGT+KPVIAS EGN KVGVK
Sbjct: 61  ELPAKASYGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVIASSEGNRKVGVK 120

Query: 123 KALIFYHGKSPKGIKTNWIMHEYRLVDYKHDRG------------KKNSLRV 162
           KAL+FY GK PKGIKTNWIMHEYRL D K   G            KKNSLR+
Sbjct: 121 KALVFYGGKPPKGIKTNWIMHEYRLADNKSGGGNNNKPPGFIIGGKKNSLRL 172

[Close]

BLAST of Cp4.1LG02g01620 vs. ExPASy TrEMBL
Match: A0A5D3BCC0 (NAC domain-containing protein 18-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G002580 PE=4 SV=1)

HSP 1 Score: 280 bits (715), Expect = 3.46e-92
Identity = 138/172 (80.23%), Postives = 143/172 (83.14%), Query Frame = 0


Query: 3   MEKLKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLYKYDPW 62
           ME  KSA E DSERPNLPPGFRFHPTDEELVVHYLKKKATS PLP AIIA+VDLYKYDPW
Sbjct: 1   MENPKSALETDSERPNLPPGFRFHPTDEELVVHYLKKKATSLPLPVAIIAEVDLYKYDPW 60

Query: 63  ELPAKANYGEQEWYFFSPRDRKYPNGARPNRATASGYWKATGTNKPVIASLEGNPKVGVK 122
           ELPAKA+YGEQEWYFFSPRDRKYPNGARPNRA  SGYWKATGT+KPVIAS EGN KVGVK
Sbjct: 61  ELPAKASYGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVIASSEGNRKVGVK 120

Query: 123 KALIFYHGKSPKGIKTNWIMHEYRLVDYKHDRG------------KKNSLRV 162
           KAL+FY GK PKGIKTNWIMHEYRL D K   G            KKNSLR+
Sbjct: 121 KALVFYGGKPPKGIKTNWIMHEYRLADNKSGGGNNNKPPGFIIGGKKNSLRL 172

[Close]

BLAST of Cp4.1LG02g01620 vs. TAIR 10
Match: AT3G15510.1 (NAC domain containing protein 2 )

HSP 1 Score: 252.7 bits (644), Expect = 2.0e-67
Identity = 120/168 (71.43%), Postives = 138/168 (82.14%), Query Frame = 0


Query: 3   MEKLKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLYKYDPW 62
           ME   S+      +PNLPPGFRFHPTDEELVVHYLK+KA S PLP AIIA+VDLYK+DPW
Sbjct: 1   MESTDSSGGPPPPQPNLPPGFRFHPTDEELVVHYLKRKAASAPLPVAIIAEVDLYKFDPW 60

Query: 63  ELPAKANYGEQEWYFFSPRDRKYPNGARPNRATASGYWKATGTNKPVIASLEGNPKVGVK 122
           ELPAKA++GEQEWYFFSPRDRKYPNGARPNRA  SGYWKATGT+KPV+AS +GN KVGVK
Sbjct: 61  ELPAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLAS-DGNQKVGVK 120

Query: 123 KALIFYHGKSPKGIKTNWIMHEYRLVDYKHDR--------GKKNSLRV 163
           KAL+FY GK PKG+K++WIMHEYRL++ K +          KKNSLR+
Sbjct: 121 KALVFYSGKPPKGVKSDWIMHEYRLIENKPNNRPPGCDFGNKKNSLRL 167

[Close]

BLAST of Cp4.1LG02g01620 vs. TAIR 10
Match: AT1G52880.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein )

HSP 1 Score: 247.3 bits (630), Expect = 8.5e-66
Identity = 119/166 (71.69%), Postives = 135/166 (81.33%), Query Frame = 0


Query: 3   MEKLKSAPEADSERPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLYKYDPW 62
           ME   S+      +PNLPPGFRFHPTDEELV+HYLK+KA S PLP AIIADVDLYK+DPW
Sbjct: 1   MESTDSSGGPPPPQPNLPPGFRFHPTDEELVIHYLKRKADSVPLPVAIIADVDLYKFDPW 60

Query: 63  ELPAKANYGEQEWYFFSPRDRKYPNGARPNRATASGYWKATGTNKPVIAS-LEGNPKVGV 122
           ELPAKA++GEQEWYFFSPRDRKYPNGARPNRA  SGYWKATGT+KPVI++   G+ KVGV
Sbjct: 61  ELPAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVISTGGGGSKKVGV 120

Query: 123 KKALIFYHGKSPKGIKTNWIMHEYRLVDYKHDR-----GKKNSLRV 163
           KKAL+FY GK PKG+K++WIMHEYRL D K         KKNSLR+
Sbjct: 121 KKALVFYSGKPPKGVKSDWIMHEYRLTDNKPTHICDFGNKKNSLRL 166

[Close]

BLAST of Cp4.1LG02g01620 vs. TAIR 10
Match: AT1G61110.1 (NAC domain containing protein 25 )

HSP 1 Score: 229.6 bits (584), Expect = 1.8e-60
Identity = 103/133 (77.44%), Postives = 116/133 (87.22%), Query Frame = 0


Query: 17  PNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLYKYDPWELPAKANYGEQEWY 76
           P+LPPGFRFHPTDEELVVHYLKKKA S PLP +IIA++DLYK+DPWELP+KA++GE EWY
Sbjct: 14  PHLPPGFRFHPTDEELVVHYLKKKADSVPLPVSIIAEIDLYKFDPWELPSKASFGEHEWY 73

Query: 77  FFSPRDRKYPNGARPNRATASGYWKATGTNKPVIASLEGNPKVGVKKALIFYHGKSPKGI 136
           FFSPRDRKYPNG RPNRA  SGYWKATGT+KP+      + KVGVKKAL+FY GK PKGI
Sbjct: 74  FFSPRDRKYPNGVRPNRAATSGYWKATGTDKPIFTC--NSHKVGVKKALVFYGGKPPKGI 133

Query: 137 KTNWIMHEYRLVD 150
           KT+WIMHEYRL D
Sbjct: 134 KTDWIMHEYRLTD 144

[Close]

BLAST of Cp4.1LG02g01620 vs. TAIR 10
Match: AT3G04070.1 (NAC domain containing protein 47 )

HSP 1 Score: 222.2 bits (565), Expect = 2.9e-58
Identity = 99/136 (72.79%), Postives = 119/136 (87.50%), Query Frame = 0


Query: 16  RPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLYKYDPWELPAKANYGEQEW 75
           R +LPPGFRFHPTDEEL++HYL+KK +S P+P +IIADVD+YK DPW+LPAKA +GE+EW
Sbjct: 7   RSSLPPGFRFHPTDEELILHYLRKKVSSSPVPLSIIADVDIYKSDPWDLPAKAPFGEKEW 66

Query: 76  YFFSPRDRKYPNGARPNRATASGYWKATGTNKPV-IASLEG-NPKVGVKKALIFYHGKSP 135
           YFFSPRDRKYPNGARPNRA ASGYWKATGT+K + + + EG +  +G+KKAL+FY GK P
Sbjct: 67  YFFSPRDRKYPNGARPNRAAASGYWKATGTDKLIAVPNGEGFHENIGIKKALVFYRGKPP 126

Query: 136 KGIKTNWIMHEYRLVD 150
           KG+KTNWIMHEYRL D
Sbjct: 127 KGVKTNWIMHEYRLAD 142

[Close]

BLAST of Cp4.1LG02g01620 vs. TAIR 10
Match: AT3G04070.2 (NAC domain containing protein 47 )

HSP 1 Score: 222.2 bits (565), Expect = 2.9e-58
Identity = 99/136 (72.79%), Postives = 119/136 (87.50%), Query Frame = 0


Query: 16  RPNLPPGFRFHPTDEELVVHYLKKKATSQPLPAAIIADVDLYKYDPWELPAKANYGEQEW 75
           R +LPPGFRFHPTDEEL++HYL+KK +S P+P +IIADVD+YK DPW+LPAKA +GE+EW
Sbjct: 7   RSSLPPGFRFHPTDEELILHYLRKKVSSSPVPLSIIADVDIYKSDPWDLPAKAPFGEKEW 66

Query: 76  YFFSPRDRKYPNGARPNRATASGYWKATGTNKPV-IASLEG-NPKVGVKKALIFYHGKSP 135
           YFFSPRDRKYPNGARPNRA ASGYWKATGT+K + + + EG +  +G+KKAL+FY GK P
Sbjct: 67  YFFSPRDRKYPNGARPNRAAASGYWKATGTDKLIAVPNGEGFHENIGIKKALVFYRGKPP 126

Query: 136 KGIKTNWIMHEYRLVD 150
           KG+KTNWIMHEYRL D
Sbjct: 127 KGVKTNWIMHEYRLAD 142

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g01620 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LD44	2.9e-66	71.43	NAC transcription factor 56 OS=Arabidopsis thaliana OX=3702 GN=NAC056 PE=2 SV=1	[more]
Q9ZNU2	1.2e-64	71.69	NAC domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=NAC018 PE=2 ...	[more]
A2YMR0	1.3e-63	76.39	NAC transcription factor ONAC010 OS=Oryza sativa subsp. indica OX=39946 GN=ONAC0...	[more]
Q8H4S4	6.6e-63	75.00	NAC domain-containing protein 10 OS=Oryza sativa subsp. japonica OX=39947 GN=NAC...	[more]
A0SPJ6	1.1e-62	77.14	NAC transcription factor NAM-B2 OS=Triticum turgidum subsp. durum OX=4567 GN=NAM...	[more]

BLAST of Cp4.1LG02g01620 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023523396.1	3.12e-117	99.38	NAC transcription factor 56-like [Cucurbita pepo subsp. pepo]	[more]
KAG7037393.1	2.20e-111	95.63	NAC transcription factor 56, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]
XP_022941398.1	2.53e-111	95.63	LOW QUALITY PROTEIN: NAC transcription factor 56-like [Cucurbita moschata]	[more]
KAG6607863.1	9.87e-100	96.50	NAC transcription factor, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_004147807.1	3.08e-93	80.81	NAC transcription factor 56 [Cucumis sativus] >KGN59897.1 hypothetical protein C...	[more]

BLAST of Cp4.1LG02g01620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FS04	1.23e-111	95.63	LOW QUALITY PROTEIN: NAC transcription factor 56-like OS=Cucurbita moschata OX=3...	[more]
A0A0A0LGE3	1.49e-93	80.81	NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G852460 PE=4 SV...	[more]
A0A345BTH2	1.65e-92	79.53	NAC8 OS=Cucurbita pepo OX=3663 PE=2 SV=1	[more]
B3SGL4	3.46e-92	80.23	NAC domain-containing protein 18-like OS=Cucumis melo OX=3656 GN=JA PE=2 SV=1	[more]
A0A5D3BCC0	3.46e-92	80.23	NAC domain-containing protein 18-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]

BLAST of Cp4.1LG02g01620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15510.1	2.0e-67	71.43	NAC domain containing protein 2	[more]
AT1G52880.1	8.5e-66	71.69	NAC (No Apical Meristem) domain transcriptional regulator superfamily protein	[more]
AT1G61110.1	1.8e-60	77.44	NAC domain containing protein 25	[more]
AT3G04070.1	2.9e-58	72.79	NAC domain containing protein 47	[more]
AT3G04070.2	2.9e-58	72.79	NAC domain containing protein 47	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 20..147 e-value: 1.6E-40 score: 139.0
IPR003441	NAC domain	PROSITE	PS51005	NAC	coord: 19..162 score: 57.046024
IPR036093	NAC domain superfamily	GENE3D	2.170.150.80	NAC domain	coord: 28..161 e-value: 2.1E-54 score: 185.5
IPR036093	NAC domain superfamily	SUPERFAMILY	101941	NAC domain	coord: 15..152
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	PANTHER	PTHR31719	NAC TRANSCRIPTION FACTOR 56	coord: 3..154
None	No IPR available	PANTHER	PTHR31719:SF148	NAC TRANSCRIPTION FACTOR 56-LIKE	coord: 3..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG02g01620.1	Cp4.1LG02g01620.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0048731	system development
molecular_function	GO:0003677	DNA binding