Cp4.1LG02g01250 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG02g01250
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Basic helix-loop-helix transcription factor
Location	Cp4.1LG02: 4764593 .. 4767685 (+)
RNA-Seq Expression	Cp4.1LG02g01250
Synteny	Cp4.1LG02g01250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGCGTTAGGATGACGTGTCTCTCCCACTCAATCCCCCAATATGGCCGAACACCTACCAACAATAATACGCCCCCAATCCCCAATCTTCAACGAATTTTATCGTCCCCAAATTTTTCATCTCCTTCAATTGCCCTAACCCTAATTCTGGTCCTCTGATTTTGCTTTCAATTACCATTCTGATCGGATTAGTAACGCTTTTTGTTGTTGTTGTTGTTGTTGTTATTGTTTGAGAAAATGGTATCCCCTGAAAATTCCAATTGGTTGTTTGATTATGGTTTGATCGATGACATCCCCGTATCGGATGCGAATTTCCCAGTCACCAGTTCGAGCTTCTCGTGGGCTGTTCAACCCTTTGATGGCACCCATGATGTCGGGTAATCTTCAGATCTCTTTCGATTAAGCTCTTAAGCTTGTTTTTATTTTTTTCGTATCGAAAGCTAAATTAGGTTTTGTTTGCTTCGAATGGTGTTTTGTTTTTTGTGTTTCTTCCTGGGTTTTCGTGTACTTGCCGAATTATGGGAGGTGGAGTGGCCCTTTAATTGCCGTCCAGATTAATATTGGGGAAGATCTCAACCTGCTTTGGAACTTTTTGGATTGAGCTAGTAATGAGTTCGGACGTCCGAGTTTTATGACTGGAAAACTCTGAGGTTTTGAGGAAAATGGTTTATAGATACTACTGGTTCTGTTTGGTGAACTATTAGGTTGTTGACCGGATTGATTTAGTGTCCACAGGGGTGATTGGTGGGATTAACAAGACGTTGGGGGCGTGAATATACCAAGAACTATGTGTTGTTGTATTTTGGTTACAGTAAGATTGTAAGGATGATTGTGCGTCTTGGCTTTTAGGTTTATATGAATTTGAATAAATGGTAGTTTCTCCGTGAGGAAAGTTTCGTATGTTATGTTGAATTCCGGTGGCATGTAGAAAGATTTGTCTTTTACTTTTTTCGACATATTAATGTAAATTTTGTTGATGTTTAGTTCTTTTTCCTTGGACATGTTATTCTAGTGCGGAAATTGATGGGTCATCGGCAGATCTGGATGGTCGTCTAGAATCTGGCTCCAAGAAGAGGTACGAAACCTTTGTTATTACATTTTAATCTTGTCTGTTCAATAGAATCAGCCTTTTGACTCTTGGTAATATTTCTGCTTTGAAGTCTTTTCCATAACGATGATCTGGGAATCAATATCATTAGAAATATATTAGCTGTATTATTATTGCCACAAACAGCATGGTTTGATGGAGTCATAAGATCAGGATTTCTTGGGATTTTTTAATCGACTTTGTGCAAGCATTTTAGTTAGTCATTACTTGTACAGTGAGGTCTTTTCTAATTTAAAATTTCCAGAAATTTGTATCCAGTTTATGTTTTAATCGGCTCGAAACTAGGTTTACATTTTATCTTACCGCTGAAATTTAAGTCTATGTCATCTTTTACTCCGGTCACAGCACTTACGATGGTTACTCACTTGTCAGATATGTGTTAACTGAAGAGCATTCAGTTTTATGGCATGGATGGGAGGGAGTGATAAAGCTATGATTCTTCCTTTATTTGAACTCCAATGCAATTATATGTGAGAGTTCTAATAGGATTGTATGGAGATGATATGTAGGATATTAGTAATCGCATAGTAGTAATTAGATAGGGTGACTTAGTTATAAATAGAGGGAGATAGGGACTTTAGAGGGGAGATCATTTTAGTGGAATTGACCATTGTGGGACTCGAGAGCGAGTTTCCCATTCGAAAGGCTATAGTTATACTGTAATTTCCCTTTGATATTGCAATTTATTAGTATCTTGTGGTAAGTGTTTGGCATCTAATAAATTGTTTGTGGCTTTTTATTATAACTATATTACATCAAGCTGATTATTCGTATTGATATCGTATCTAGTGTCCTAATCAATGTGATTTAGTAAAAGGCTAAGGATCCATTTATTTATTTTACGTCCTTTTTCCGTTGTGAAATTTGGCTTACCATGTTAAGATGTTGAGTTGGTTTAACTAGGTGTAAATAGATATAGTAACAAATGAAACTAAAAGTGGGAAGGAAAATATGATATAGCATCAAATAAAGTACACTCGTTTTATGCTGCAGGGTCAGATCTGATTCATGTAGTGGATCAAGCTCCAAAGCATGTAGGGAAAAATTGCGGAGAGATAGGCTCAACGAGAAGTACTTCCTCGATCCCGAACCCCCCATTTATCTATGTTTATAACGATTTTCTGTTACCTCAACAAATCAAATTGTTATGTGCATCTCAAAACAGGTTTCTGACACTGGGCTCCATTTTGGAACCTGGAAGGACACCCAAAACCGACAAGGCTGCAATTTTAGTTGATGCTGTTCGAATGGTGAATCAGTTACGTAGCGAAGCCCAGAAACTAAAGGAATCAAATTCAAGTCTGCAGGATAAGATTAAAGAATTGAAGGTACGTCTATTTCGCTTTCTTGCCAAAGATGTGCCATTATATTAGCTCGCTTTGTTTGCTTTTGATGCATTTGAATGGAGAAGTCTGATAATAACATTTCATTTCTCGCAATCTTGTATAGGCCGAGAAGAACGAGCTTCGTGACGAGAAGCAGAGGCTGAAGGCCGACAAGGAGAAGCTAGAGCAGCAAGTGAAGTCCATGCATGCTCACCCTGCTGGCTTCTTACCTCCACCAATCCCCACATTTGCTGCTCAGAGTCAAGCTCCTGGCGGTAATAAGTTAGTTCCTTTCATTGGTTACCACCCAAGTGTAGCCATGTGGCAGTTCATGCCTCCTGCTGCAGTCGACACGTCACAGGACCACGTACTCCGGCCACCCGTCGCCTAACTCGGTGACCAGCTGAGGTTTCCTGTAAAATTCCACTGGCAGCATCTGGTTGCTTGGGAATTTATCCTTAACTTCAACATTTATTCTGTCATTGTCGAGCAATATATATTAGTATTGGTAGTTTGTAGGGTTGTCAATTGTTTTTGGGACTGACTATCTTATGTGTCATTGGATACTTGAAAGAAGAACAAGTAGTATTTTGTAATTGTAAATGTGATTTCAGTGATTTGCTAATGACTCTCTCCATTCCATGCCCTTTCCGCGTTCTCCGA

mRNA sequence

CGCGTTAGGATGACGTGTCTCTCCCACTCAATCCCCCAATATGGCCGAACACCTACCAACAATAATACGCCCCCAATCCCCAATCTTCAACGAATTTTATCGTCCCCAAATTTTTCATCTCCTTCAATTGCCCTAACCCTAATTCTGGTCCTCTGATTTTGCTTTCAATTACCATTCTGATCGGATTAGTAACGCTTTTTGTTGTTGTTGTTGTTGTTGTTATTGTTTGAGAAAATGGTATCCCCTGAAAATTCCAATTGGTTGTTTGATTATGGTTTGATCGATGACATCCCCGTATCGGATGCGAATTTCCCAGTCACCAGTTCGAGCTTCTCGTGGGCTGTTCAACCCTTTGATGGCACCCATGATGTCGGTGCGGAAATTGATGGGTCATCGGCAGATCTGGATGGTCGTCTAGAATCTGGCTCCAAGAAGAGGGTCAGATCTGATTCATGTAGTGGATCAAGCTCCAAAGCATGTAGGGAAAAATTGCGGAGAGATAGGCTCAACGAGAAGTTTCTGACACTGGGCTCCATTTTGGAACCTGGAAGGACACCCAAAACCGACAAGGCTGCAATTTTAGTTGATGCTGTTCGAATGGTGAATCAGTTACGTAGCGAAGCCCAGAAACTAAAGGAATCAAATTCAAGTCTGCAGGATAAGATTAAAGAATTGAAGGCCGAGAAGAACGAGCTTCGTGACGAGAAGCAGAGGCTGAAGGCCGACAAGGAGAAGCTAGAGCAGCAAGTGAAGTCCATGCATGCTCACCCTGCTGGCTTCTTACCTCCACCAATCCCCACATTTGCTGCTCAGAGTCAAGCTCCTGGCGGTAATAAGTTAGTTCCTTTCATTGGTTACCACCCAAGTGTAGCCATGTGGCAGTTCATGCCTCCTGCTGCAGTCGACACGTCACAGGACCACGTACTCCGGCCACCCGTCGCCTAACTCGGTGACCAGCTGAGGTTTCCTGTAAAATTCCACTGGCAGCATCTGGTTGCTTGGGAATTTATCCTTAACTTCAACATTTATTCTGTCATTGTCGAGCAATATATATTAGTATTGGTAGTTTGTAGGGTTGTCAATTGTTTTTGGGACTGACTATCTTATGTGTCATTGGATACTTGAAAGAAGAACAAGTAGTATTTTGTAATTGTAAATGTGATTTCAGTGATTTGCTAATGACTCTCTCCATTCCATGCCCTTTCCGCGTTCTCCGA

Coding sequence (CDS)

ATGGTATCCCCTGAAAATTCCAATTGGTTGTTTGATTATGGTTTGATCGATGACATCCCCGTATCGGATGCGAATTTCCCAGTCACCAGTTCGAGCTTCTCGTGGGCTGTTCAACCCTTTGATGGCACCCATGATGTCGGTGCGGAAATTGATGGGTCATCGGCAGATCTGGATGGTCGTCTAGAATCTGGCTCCAAGAAGAGGGTCAGATCTGATTCATGTAGTGGATCAAGCTCCAAAGCATGTAGGGAAAAATTGCGGAGAGATAGGCTCAACGAGAAGTTTCTGACACTGGGCTCCATTTTGGAACCTGGAAGGACACCCAAAACCGACAAGGCTGCAATTTTAGTTGATGCTGTTCGAATGGTGAATCAGTTACGTAGCGAAGCCCAGAAACTAAAGGAATCAAATTCAAGTCTGCAGGATAAGATTAAAGAATTGAAGGCCGAGAAGAACGAGCTTCGTGACGAGAAGCAGAGGCTGAAGGCCGACAAGGAGAAGCTAGAGCAGCAAGTGAAGTCCATGCATGCTCACCCTGCTGGCTTCTTACCTCCACCAATCCCCACATTTGCTGCTCAGAGTCAAGCTCCTGGCGGTAATAAGTTAGTTCCTTTCATTGGTTACCACCCAAGTGTAGCCATGTGGCAGTTCATGCCTCCTGCTGCAGTCGACACGTCACAGGACCACGTACTCCGGCCACCCGTCGCCTAA

Protein sequence

MVSPENSNWLFDYGLIDDIPVSDANFPVTSSSFSWAVQPFDGTHDVGAEIDGSSADLDGRLESGSKKRVRSDSCSGSSSKACREKLRRDRLNEKFLTLGSILEPGRTPKTDKAAILVDAVRMVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAGFLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA

Homology

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BLAST of Cp4.1LG02g01250 vs. ExPASy Swiss-Prot
Match: Q9FH37 (Transcription factor ILR3 OS=Arabidopsis thaliana OX=3702 GN=ILR3 PE=1 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 4.3e-71
Identity = 158/241 (65.56%), Postives = 182/241 (75.52%), Query Frame = 0


Query: 1   MVSPENSNWLFDYGLIDDIPVSDANFPVTSSSFSWAV-QPFDGTHDVGAEIDGSSADLDG 60
           MVSPEN+NW+ D  LID       +F +    FSW V QP   + +  A +DGS+ + + 
Sbjct: 1   MVSPENANWICD--LID---ADYGSFTIQGPGFSWPVQQPIGVSSNSSAGVDGSAGNSEA 60

Query: 61  RLESGSKKRVRSDSCSGSSSKACREKLRRDRLNEKFLTLGSILEPGRTPKTDKAAILVDA 120
             E GSKKR R +S S +SSKACREK RRDRLN+KF+ LG+ILEPG  PKTDKAAILVDA
Sbjct: 61  SKEPGSKKRGRCESSSATSSKACREKQRRDRLNDKFMELGAILEPGNPPKTDKAAILVDA 120

Query: 121 VRMVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHP 180
           VRMV QLR EAQKLK+SNSSLQDKIKELK EKNELRDEKQRLK +KEKLEQQ+K+M+A  
Sbjct: 121 VRMVTQLRGEAQKLKDSNSSLQDKIKELKTEKNELRDEKQRLKTEKEKLEQQLKAMNAPQ 180

Query: 181 AGFLPPP--IPT--FAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPV 237
             F P P  +PT   +AQ QAP GNK+VP I Y P VAMWQFMPPA+VDTSQDHVLRPPV
Sbjct: 181 PSFFPAPPMMPTAFASAQGQAP-GNKMVPIISY-PGVAMWQFMPPASVDTSQDHVLRPPV 234

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BLAST of Cp4.1LG02g01250 vs. ExPASy Swiss-Prot
Match: Q9C682 (Transcription factor bHLH115 OS=Arabidopsis thaliana OX=3702 GN=BHLH115 PE=1 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 1.4e-66
Identity = 147/239 (61.51%), Postives = 177/239 (74.06%), Query Frame = 0


Query: 1   MVSPENSNWLFDYGLIDDIPVSDANFPVTSSSFSWAVQPFDGTHDVGAEIDGSSADLDGR 60
           MVSPEN+NWL DY LI+    SD N      +F W +   DG+  V  E+DG   D D  
Sbjct: 1   MVSPENTNWLSDYPLIEG-AFSDQN-----PTFPWQI---DGSATVSVEVDGFLCDADVI 60

Query: 61  LESGSKKRVRSDSCSGSSSKACREKLRRDRLNEKFLTLGSILEPGRTPKTDKAAILVDAV 120
            E  S+KR++++SC+GS+SKACREK RRDRLN+KF  L S+LEPGRTPKTDK AI+ DA+
Sbjct: 61  KEPSSRKRIKTESCTGSNSKACREKQRRDRLNDKFTELSSVLEPGRTPKTDKVAIINDAI 120

Query: 121 RMVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPA 180
           RMVNQ R EAQKLK+ NSSLQ+KIKELK EKNELRDEKQ+LK +KE+++QQ+K++   P 
Sbjct: 121 RMVNQARDEAQKLKDLNSSLQEKIKELKDEKNELRDEKQKLKVEKERIDQQLKAIKTQPQ 180

Query: 181 G---FLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA 237
               FLP   P   +Q+QAP G+KLVPF  Y P  AMWQFMPPAAVDTSQDHVLRPPVA
Sbjct: 181 PQPCFLPN--PQTLSQAQAP-GSKLVPFTTY-PGFAMWQFMPPAAVDTSQDHVLRPPVA 226

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BLAST of Cp4.1LG02g01250 vs. ExPASy Swiss-Prot
Match: Q8L467 (Transcription factor bHLH104 OS=Arabidopsis thaliana OX=3702 GN=BHLH104 PE=1 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 4.6e-41
Identity = 99/173 (57.23%), Postives = 123/173 (71.10%), Query Frame = 0


Query: 65  SKKRVRSDSCS-GSSSKACREKLRRDRLNEKFLTLGSILEPGRTPKTDKAAILVDAVRMV 124
           S+KR R+ SCS G  +KACRE+LRR++LNE+F+ L S+LEPGRTPKTDK AIL DA+R++
Sbjct: 119 SRKRARTGSCSRGGGTKACRERLRREKLNERFMDLSSVLEPGRTPKTDKPAILDDAIRIL 178

Query: 125 NQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAGFL 184
           NQLR EA KL+E+N  L ++IK LKAEKNELR+EK  LKADKEK EQQ+KSM A  +GF+
Sbjct: 179 NQLRDEALKLEETNQKLLEEIKSLKAEKNELREEKLVLKADKEKTEQQLKSMTAPSSGFI 238

Query: 185 PPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA 237
           P     F     A     + P  GY P   MW +MP +  DTS+D  LRPP A
Sbjct: 239 PHIPAAFNHNKMA-----VYPSYGYMP---MWHYMPQSVRDTSRDQELRPPAA 283

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BLAST of Cp4.1LG02g01250 vs. ExPASy Swiss-Prot
Match: Q9LTC7 (Transcription factor bHLH34 OS=Arabidopsis thaliana OX=3702 GN=BHLH34 PE=2 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 3.3e-39
Identity = 97/176 (55.11%), Postives = 124/176 (70.45%), Query Frame = 0


Query: 62  ESGSKKRVRSDSCSGSSSKACREKLRRDRLNEKFLTLGSILEPGRTPKTDKAAILVDAVR 121
           E  S KR R+ SCS   +KACREKLRR++LN+KF+ L S+LEPGRTPKTDK+AIL DA+R
Sbjct: 149 EECSGKRRRTGSCSKPGTKACREKLRREKLNDKFMDLSSVLEPGRTPKTDKSAILDDAIR 208

Query: 122 MVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAG 181
           +VNQLR EA +L+E+N  L ++IK LKA+KNELR+EK  LKA+KEK+EQQ+KSM     G
Sbjct: 209 VVNQLRGEAHELQETNQKLLEEIKSLKADKNELREEKLVLKAEKEKMEQQLKSMVVPSPG 268

Query: 182 FLPPPIP-TFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA 237
           F+P   P  F +   A       P+  Y P++ MW  +PPA  DTS+D    PPVA
Sbjct: 269 FMPSQHPAAFHSHKMAVA----YPYGYYPPNMPMWSPLPPADRDTSRDLKNLPPVA 320

[Close]

BLAST of Cp4.1LG02g01250 vs. ExPASy Swiss-Prot
Match: Q9LT23 (Transcription factor bHLH121 OS=Arabidopsis thaliana OX=3702 GN=BHLH121 PE=1 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 4.7e-17
Identity = 63/156 (40.38%), Postives = 90/156 (57.69%), Query Frame = 0


Query: 72  DSCSGSSSKACREKLRRDRLNEKFLTLGSILEPGRTPKTDKAAILVDAVRMVNQLRSEAQ 131
           D  +  S KA REKLRR++LNE F+ LG++L+P R PK DKA IL D V+++ +L SE  
Sbjct: 55  DVSARKSQKAGREKLRREKLNEHFVELGNVLDPER-PKNDKATILTDTVQLLKELTSEVN 114

Query: 132 KLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKL----EQQVKSMHA------HPAG 191
           KLK   ++L D+ +EL  EKN+LR+EK  LK+D E L    +Q+++SM        H   
Sbjct: 115 KLKSEYTALTDESRELTQEKNDLREEKTSLKSDIENLNLQYQQRLRSMSPWGAAMDHTVM 174

Query: 192 FLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQF 218
             PPP   +      P G+     I  HPS+  + +
Sbjct: 175 MAPPPSFPYPMPIAMPPGS-----IPMHPSMPSYTY 204

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BLAST of Cp4.1LG02g01250 vs. NCBI nr
Match: XP_022940189.1 (transcription factor ILR3-like [Cucurbita moschata] >XP_023525507.1 transcription factor ILR3-like [Cucurbita pepo subsp. pepo] >KAG6607821.1 Transcription factor ILR3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 454 bits (1169), Expect = 6.50e-161
Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0


Query: 1   MVSPENSNWLFDYGLIDDIPVSDANFPVTSSSFSWAVQPFDGTHDVGAEIDGSSADLDGR 60
           MVSPENSNWLFDYGLIDDIPVSDANFPVTSSSFSWAVQPFDGTHDVGAEIDGSSADLDGR
Sbjct: 1   MVSPENSNWLFDYGLIDDIPVSDANFPVTSSSFSWAVQPFDGTHDVGAEIDGSSADLDGR 60

Query: 61  LESGSKKRVRSDSCSGSSSKACREKLRRDRLNEKFLTLGSILEPGRTPKTDKAAILVDAV 120
           LESGSKKRVRSDSCSGSSSKACREKLRRDRLNEKFLTLGSILEPGRTPKTDKAAILVDAV
Sbjct: 61  LESGSKKRVRSDSCSGSSSKACREKLRRDRLNEKFLTLGSILEPGRTPKTDKAAILVDAV 120

Query: 121 RMVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPA 180
           RMVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPA
Sbjct: 121 RMVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPA 180

Query: 181 GFLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA 236
           GFLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA
Sbjct: 181 GFLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA 236

[Close]

BLAST of Cp4.1LG02g01250 vs. NCBI nr
Match: XP_022981592.1 (transcription factor ILR3-like [Cucurbita maxima])

HSP 1 Score: 448 bits (1152), Expect = 2.54e-158
Identity = 232/236 (98.31%), Postives = 233/236 (98.73%), Query Frame = 0


Query: 1   MVSPENSNWLFDYGLIDDIPVSDANFPVTSSSFSWAVQPFDGTHDVGAEIDGSSADLDGR 60
           MVSPENSNWLFDYGLIDDIPVSDANFPVTSSSFSWAVQPFDGTHDVG EIDGSSADLDGR
Sbjct: 1   MVSPENSNWLFDYGLIDDIPVSDANFPVTSSSFSWAVQPFDGTHDVGVEIDGSSADLDGR 60

Query: 61  LESGSKKRVRSDSCSGSSSKACREKLRRDRLNEKFLTLGSILEPGRTPKTDKAAILVDAV 120
           LESGSKKRVRSDSCSGSSSKACREKLRRDRLNEKFL LGSIL+PGRTPKTDKAAILVDA 
Sbjct: 61  LESGSKKRVRSDSCSGSSSKACREKLRRDRLNEKFLILGSILDPGRTPKTDKAAILVDAA 120

Query: 121 RMVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPA 180
           RMVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPA
Sbjct: 121 RMVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPA 180

Query: 181 GFLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA 236
           GFLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA
Sbjct: 181 GFLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA 236

[Close]

BLAST of Cp4.1LG02g01250 vs. NCBI nr
Match: XP_038900262.1 (transcription factor ILR3-like [Benincasa hispida])

HSP 1 Score: 398 bits (1023), Expect = 1.12e-138
Identity = 210/236 (88.98%), Postives = 219/236 (92.80%), Query Frame = 0


Query: 1   MVSPENSNWLFDYGLIDDIPVSDANFPVTSSSFSWAVQPFDGTHDVGAEIDGSSADLDGR 60
           MVSPEN NWLFDYGLIDDIPV DANFPVTSSSFSW++QPF+GT D G EIDGS ADLDGR
Sbjct: 1   MVSPENPNWLFDYGLIDDIPVPDANFPVTSSSFSWSIQPFNGTPDPGVEIDGSLADLDGR 60

Query: 61  LESGSKKRVRSDSCSGSSSKACREKLRRDRLNEKFLTLGSILEPGRTPKTDKAAILVDAV 120
           LESGSKKRVRSDSCS SSSKACREKLRRDRLN+KFL L SIL+PGR PKTDKAAILVDAV
Sbjct: 61  LESGSKKRVRSDSCSASSSKACREKLRRDRLNDKFLELNSILDPGRPPKTDKAAILVDAV 120

Query: 121 RMVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPA 180
           RMVNQLRSE QKLKESNSSLQ+KIKELKAEKNELRDEKQRLKADKE+LEQQVKSM A   
Sbjct: 121 RMVNQLRSETQKLKESNSSLQEKIKELKAEKNELRDEKQRLKADKERLEQQVKSMPAQQP 180

Query: 181 GFLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA 236
           GFLPPPIPTFAAQ QAPG +KLVPFIGYHPSVAMWQFMPPAAVDTSQDH+LRPPVA
Sbjct: 181 GFLPPPIPTFAAQCQAPG-SKLVPFIGYHPSVAMWQFMPPAAVDTSQDHILRPPVA 235

[Close]

BLAST of Cp4.1LG02g01250 vs. NCBI nr
Match: XP_008454561.1 (PREDICTED: transcription factor ILR3-like [Cucumis melo] >KAA0046455.1 transcription factor ILR3-like [Cucumis melo var. makuwa] >TYJ97758.1 transcription factor ILR3-like [Cucumis melo var. makuwa])

HSP 1 Score: 397 bits (1019), Expect = 4.56e-138
Identity = 208/236 (88.14%), Postives = 216/236 (91.53%), Query Frame = 0


Query: 1   MVSPENSNWLFDYGLIDDIPVSDANFPVTSSSFSWAVQPFDGTHDVGAEIDGSSADLDGR 60
           MVSPEN NWLFDYGLI+DIPV D NFPVTSSSFSWA+Q F+G HD G EIDGS ADLDGR
Sbjct: 1   MVSPENPNWLFDYGLIEDIPVPDGNFPVTSSSFSWAIQTFNGAHDTGVEIDGSLADLDGR 60

Query: 61  LESGSKKRVRSDSCSGSSSKACREKLRRDRLNEKFLTLGSILEPGRTPKTDKAAILVDAV 120
           LESGSKKRVRSDSCS SSSKACREKLRRDRLN+KFL LGSIL+PGR PKTDKAAILVDAV
Sbjct: 61  LESGSKKRVRSDSCSASSSKACREKLRRDRLNDKFLELGSILDPGRPPKTDKAAILVDAV 120

Query: 121 RMVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPA 180
           RMVNQLRSE QKLKESNSSLQ+KIKELKAEKNELRDEKQRLKADKE+LEQQVKSM A   
Sbjct: 121 RMVNQLRSETQKLKESNSSLQEKIKELKAEKNELRDEKQRLKADKERLEQQVKSMPAQQP 180

Query: 181 GFLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA 236
           GFLPPPIPTF AQ QAPG NKL PFIGYHPSVAMWQFMPPAAVDTSQDH+LRPPVA
Sbjct: 181 GFLPPPIPTFPAQGQAPG-NKLFPFIGYHPSVAMWQFMPPAAVDTSQDHILRPPVA 235

[Close]

BLAST of Cp4.1LG02g01250 vs. NCBI nr
Match: XP_004151962.3 (transcription factor ILR3 [Cucumis sativus] >KAE8650684.1 hypothetical protein Csa_011799 [Cucumis sativus])

HSP 1 Score: 393 bits (1010), Expect = 1.07e-136
Identity = 206/236 (87.29%), Postives = 215/236 (91.10%), Query Frame = 0


Query: 1   MVSPENSNWLFDYGLIDDIPVSDANFPVTSSSFSWAVQPFDGTHDVGAEIDGSSADLDGR 60
           MVSPEN NWLFDYGLI+DIPV D NFPVTSSSFSW +QPF+G+HD G EIDGS ADLDG 
Sbjct: 1   MVSPENPNWLFDYGLIEDIPVPDGNFPVTSSSFSWPIQPFNGSHDSGVEIDGSLADLDGH 60

Query: 61  LESGSKKRVRSDSCSGSSSKACREKLRRDRLNEKFLTLGSILEPGRTPKTDKAAILVDAV 120
           LESGSKKRVRSDSCS SSSKACREKLRRDRLN+KFL LGSIL+PGR PKTDKAAILVDAV
Sbjct: 61  LESGSKKRVRSDSCSASSSKACREKLRRDRLNDKFLELGSILDPGRPPKTDKAAILVDAV 120

Query: 121 RMVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPA 180
           RMVNQLR E +KLKESNSSLQ+KIKELKAEKNELRDEKQRLKADKE+LEQQVKSM A   
Sbjct: 121 RMVNQLRGETEKLKESNSSLQEKIKELKAEKNELRDEKQRLKADKERLEQQVKSMPAQQP 180

Query: 181 GFLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA 236
           GFLPPPIPTF AQ QAPG NKL PFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA
Sbjct: 181 GFLPPPIPTFPAQGQAPG-NKLFPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA 235

[Close]

BLAST of Cp4.1LG02g01250 vs. ExPASy TrEMBL
Match: A0A6J1FJB6 (transcription factor ILR3-like OS=Cucurbita moschata OX=3662 GN=LOC111445891 PE=4 SV=1)

HSP 1 Score: 454 bits (1169), Expect = 3.15e-161
Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0


Query: 1   MVSPENSNWLFDYGLIDDIPVSDANFPVTSSSFSWAVQPFDGTHDVGAEIDGSSADLDGR 60
           MVSPENSNWLFDYGLIDDIPVSDANFPVTSSSFSWAVQPFDGTHDVGAEIDGSSADLDGR
Sbjct: 1   MVSPENSNWLFDYGLIDDIPVSDANFPVTSSSFSWAVQPFDGTHDVGAEIDGSSADLDGR 60

Query: 61  LESGSKKRVRSDSCSGSSSKACREKLRRDRLNEKFLTLGSILEPGRTPKTDKAAILVDAV 120
           LESGSKKRVRSDSCSGSSSKACREKLRRDRLNEKFLTLGSILEPGRTPKTDKAAILVDAV
Sbjct: 61  LESGSKKRVRSDSCSGSSSKACREKLRRDRLNEKFLTLGSILEPGRTPKTDKAAILVDAV 120

Query: 121 RMVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPA 180
           RMVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPA
Sbjct: 121 RMVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPA 180

Query: 181 GFLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA 236
           GFLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA
Sbjct: 181 GFLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA 236

[Close]

BLAST of Cp4.1LG02g01250 vs. ExPASy TrEMBL
Match: A0A6J1IUE4 (transcription factor ILR3-like OS=Cucurbita maxima OX=3661 GN=LOC111480664 PE=4 SV=1)

HSP 1 Score: 448 bits (1152), Expect = 1.23e-158
Identity = 232/236 (98.31%), Postives = 233/236 (98.73%), Query Frame = 0


Query: 1   MVSPENSNWLFDYGLIDDIPVSDANFPVTSSSFSWAVQPFDGTHDVGAEIDGSSADLDGR 60
           MVSPENSNWLFDYGLIDDIPVSDANFPVTSSSFSWAVQPFDGTHDVG EIDGSSADLDGR
Sbjct: 1   MVSPENSNWLFDYGLIDDIPVSDANFPVTSSSFSWAVQPFDGTHDVGVEIDGSSADLDGR 60

Query: 61  LESGSKKRVRSDSCSGSSSKACREKLRRDRLNEKFLTLGSILEPGRTPKTDKAAILVDAV 120
           LESGSKKRVRSDSCSGSSSKACREKLRRDRLNEKFL LGSIL+PGRTPKTDKAAILVDA 
Sbjct: 61  LESGSKKRVRSDSCSGSSSKACREKLRRDRLNEKFLILGSILDPGRTPKTDKAAILVDAA 120

Query: 121 RMVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPA 180
           RMVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPA
Sbjct: 121 RMVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPA 180

Query: 181 GFLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA 236
           GFLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA
Sbjct: 181 GFLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA 236

[Close]

BLAST of Cp4.1LG02g01250 vs. ExPASy TrEMBL
Match: A0A5D3BHU4 (Transcription factor ILR3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G00660 PE=4 SV=1)

HSP 1 Score: 397 bits (1019), Expect = 2.21e-138
Identity = 208/236 (88.14%), Postives = 216/236 (91.53%), Query Frame = 0


Query: 1   MVSPENSNWLFDYGLIDDIPVSDANFPVTSSSFSWAVQPFDGTHDVGAEIDGSSADLDGR 60
           MVSPEN NWLFDYGLI+DIPV D NFPVTSSSFSWA+Q F+G HD G EIDGS ADLDGR
Sbjct: 1   MVSPENPNWLFDYGLIEDIPVPDGNFPVTSSSFSWAIQTFNGAHDTGVEIDGSLADLDGR 60

Query: 61  LESGSKKRVRSDSCSGSSSKACREKLRRDRLNEKFLTLGSILEPGRTPKTDKAAILVDAV 120
           LESGSKKRVRSDSCS SSSKACREKLRRDRLN+KFL LGSIL+PGR PKTDKAAILVDAV
Sbjct: 61  LESGSKKRVRSDSCSASSSKACREKLRRDRLNDKFLELGSILDPGRPPKTDKAAILVDAV 120

Query: 121 RMVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPA 180
           RMVNQLRSE QKLKESNSSLQ+KIKELKAEKNELRDEKQRLKADKE+LEQQVKSM A   
Sbjct: 121 RMVNQLRSETQKLKESNSSLQEKIKELKAEKNELRDEKQRLKADKERLEQQVKSMPAQQP 180

Query: 181 GFLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA 236
           GFLPPPIPTF AQ QAPG NKL PFIGYHPSVAMWQFMPPAAVDTSQDH+LRPPVA
Sbjct: 181 GFLPPPIPTFPAQGQAPG-NKLFPFIGYHPSVAMWQFMPPAAVDTSQDHILRPPVA 235

[Close]

BLAST of Cp4.1LG02g01250 vs. ExPASy TrEMBL
Match: A0A1S3BYW4 (transcription factor ILR3-like OS=Cucumis melo OX=3656 GN=LOC103494952 PE=4 SV=1)

HSP 1 Score: 397 bits (1019), Expect = 2.21e-138
Identity = 208/236 (88.14%), Postives = 216/236 (91.53%), Query Frame = 0


Query: 1   MVSPENSNWLFDYGLIDDIPVSDANFPVTSSSFSWAVQPFDGTHDVGAEIDGSSADLDGR 60
           MVSPEN NWLFDYGLI+DIPV D NFPVTSSSFSWA+Q F+G HD G EIDGS ADLDGR
Sbjct: 1   MVSPENPNWLFDYGLIEDIPVPDGNFPVTSSSFSWAIQTFNGAHDTGVEIDGSLADLDGR 60

Query: 61  LESGSKKRVRSDSCSGSSSKACREKLRRDRLNEKFLTLGSILEPGRTPKTDKAAILVDAV 120
           LESGSKKRVRSDSCS SSSKACREKLRRDRLN+KFL LGSIL+PGR PKTDKAAILVDAV
Sbjct: 61  LESGSKKRVRSDSCSASSSKACREKLRRDRLNDKFLELGSILDPGRPPKTDKAAILVDAV 120

Query: 121 RMVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPA 180
           RMVNQLRSE QKLKESNSSLQ+KIKELKAEKNELRDEKQRLKADKE+LEQQVKSM A   
Sbjct: 121 RMVNQLRSETQKLKESNSSLQEKIKELKAEKNELRDEKQRLKADKERLEQQVKSMPAQQP 180

Query: 181 GFLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA 236
           GFLPPPIPTF AQ QAPG NKL PFIGYHPSVAMWQFMPPAAVDTSQDH+LRPPVA
Sbjct: 181 GFLPPPIPTFPAQGQAPG-NKLFPFIGYHPSVAMWQFMPPAAVDTSQDHILRPPVA 235

[Close]

BLAST of Cp4.1LG02g01250 vs. ExPASy TrEMBL
Match: A0A0A0L7N8 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G415100 PE=4 SV=1)

HSP 1 Score: 396 bits (1017), Expect = 4.45e-138
Identity = 208/236 (88.14%), Postives = 216/236 (91.53%), Query Frame = 0


Query: 1   MVSPENSNWLFDYGLIDDIPVSDANFPVTSSSFSWAVQPFDGTHDVGAEIDGSSADLDGR 60
           MVSPEN NWLFDYGLI+DIPV D NFPVTSSSFSW +QPF+G+HD G EIDGS ADLDG 
Sbjct: 1   MVSPENPNWLFDYGLIEDIPVPDGNFPVTSSSFSWPIQPFNGSHDSGVEIDGSLADLDGH 60

Query: 61  LESGSKKRVRSDSCSGSSSKACREKLRRDRLNEKFLTLGSILEPGRTPKTDKAAILVDAV 120
           LESGSKKRVRSDSCS SSSKACREKLRRDRLN+KFL LGSIL+PGR PKTDKAAILVDAV
Sbjct: 61  LESGSKKRVRSDSCSASSSKACREKLRRDRLNDKFLELGSILDPGRPPKTDKAAILVDAV 120

Query: 121 RMVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPA 180
           RMVNQLRSE QKLKESNSSLQ+KIKELKAEKNELRDEKQRLKADKE+LEQQVKSM A   
Sbjct: 121 RMVNQLRSETQKLKESNSSLQEKIKELKAEKNELRDEKQRLKADKERLEQQVKSMPAQQP 180

Query: 181 GFLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA 236
           GFLPPPIPTF AQ QAPG NKL PFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA
Sbjct: 181 GFLPPPIPTFPAQGQAPG-NKLFPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA 235

[Close]

BLAST of Cp4.1LG02g01250 vs. TAIR 10
Match: AT5G54680.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 269.2 bits (687), Expect = 3.1e-72
Identity = 158/241 (65.56%), Postives = 182/241 (75.52%), Query Frame = 0


Query: 1   MVSPENSNWLFDYGLIDDIPVSDANFPVTSSSFSWAV-QPFDGTHDVGAEIDGSSADLDG 60
           MVSPEN+NW+ D  LID       +F +    FSW V QP   + +  A +DGS+ + + 
Sbjct: 1   MVSPENANWICD--LID---ADYGSFTIQGPGFSWPVQQPIGVSSNSSAGVDGSAGNSEA 60

Query: 61  RLESGSKKRVRSDSCSGSSSKACREKLRRDRLNEKFLTLGSILEPGRTPKTDKAAILVDA 120
             E GSKKR R +S S +SSKACREK RRDRLN+KF+ LG+ILEPG  PKTDKAAILVDA
Sbjct: 61  SKEPGSKKRGRCESSSATSSKACREKQRRDRLNDKFMELGAILEPGNPPKTDKAAILVDA 120

Query: 121 VRMVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHP 180
           VRMV QLR EAQKLK+SNSSLQDKIKELK EKNELRDEKQRLK +KEKLEQQ+K+M+A  
Sbjct: 121 VRMVTQLRGEAQKLKDSNSSLQDKIKELKTEKNELRDEKQRLKTEKEKLEQQLKAMNAPQ 180

Query: 181 AGFLPPP--IPT--FAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPV 237
             F P P  +PT   +AQ QAP GNK+VP I Y P VAMWQFMPPA+VDTSQDHVLRPPV
Sbjct: 181 PSFFPAPPMMPTAFASAQGQAP-GNKMVPIISY-PGVAMWQFMPPASVDTSQDHVLRPPV 234

[Close]

BLAST of Cp4.1LG02g01250 vs. TAIR 10
Match: AT1G51070.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 254.2 bits (648), Expect = 1.0e-67
Identity = 147/239 (61.51%), Postives = 177/239 (74.06%), Query Frame = 0


Query: 1   MVSPENSNWLFDYGLIDDIPVSDANFPVTSSSFSWAVQPFDGTHDVGAEIDGSSADLDGR 60
           MVSPEN+NWL DY LI+    SD N      +F W +   DG+  V  E+DG   D D  
Sbjct: 1   MVSPENTNWLSDYPLIEG-AFSDQN-----PTFPWQI---DGSATVSVEVDGFLCDADVI 60

Query: 61  LESGSKKRVRSDSCSGSSSKACREKLRRDRLNEKFLTLGSILEPGRTPKTDKAAILVDAV 120
            E  S+KR++++SC+GS+SKACREK RRDRLN+KF  L S+LEPGRTPKTDK AI+ DA+
Sbjct: 61  KEPSSRKRIKTESCTGSNSKACREKQRRDRLNDKFTELSSVLEPGRTPKTDKVAIINDAI 120

Query: 121 RMVNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPA 180
           RMVNQ R EAQKLK+ NSSLQ+KIKELK EKNELRDEKQ+LK +KE+++QQ+K++   P 
Sbjct: 121 RMVNQARDEAQKLKDLNSSLQEKIKELKDEKNELRDEKQKLKVEKERIDQQLKAIKTQPQ 180

Query: 181 G---FLPPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA 237
               FLP   P   +Q+QAP G+KLVPF  Y P  AMWQFMPPAAVDTSQDHVLRPPVA
Sbjct: 181 PQPCFLPN--PQTLSQAQAP-GSKLVPFTTY-PGFAMWQFMPPAAVDTSQDHVLRPPVA 226

[Close]

BLAST of Cp4.1LG02g01250 vs. TAIR 10
Match: AT1G51070.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 226.9 bits (577), Expect = 1.7e-59
Identity = 150/297 (50.51%), Postives = 180/297 (60.61%), Query Frame = 0


Query: 1   MVSPENSNWLFDYGLIDDIPVSDAN--FP--------VTSSSFSW--------------- 60
           MVSPEN+NWL DY LI+    SD N  FP        V   S+ W               
Sbjct: 1   MVSPENTNWLSDYPLIEG-AFSDQNPTFPWQIDGSATVRIGSYIWRSCYGCVITQLVFRC 60

Query: 61  -----------------------AVQPF-----DGTHDV-----GAEIDGSSADLDGRLE 120
                                  A  P      D +  +       E+DG   D D   E
Sbjct: 61  SCCDRDIGLLHKSILCFFFCLRFAYVPLFPKEVDESRSLPIAKGSVEVDGFLCDADVIKE 120

Query: 121 SGSKKRVRSDSCSGSSSKACREKLRRDRLNEKFLTLGSILEPGRTPKTDKAAILVDAVRM 180
             S+KR++++SC+GS+SKACREK RRDRLN+KF  L S+LEPGRTPKTDK AI+ DA+RM
Sbjct: 121 PSSRKRIKTESCTGSNSKACREKQRRDRLNDKFTELSSVLEPGRTPKTDKVAIINDAIRM 180

Query: 181 VNQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAG- 237
           VNQ R EAQKLK+ NSSLQ+KIKELK EKNELRDEKQ+LK +KE+++QQ+K++   P   
Sbjct: 181 VNQARDEAQKLKDLNSSLQEKIKELKDEKNELRDEKQKLKVEKERIDQQLKAIKTQPQPQ 240

[Close]

BLAST of Cp4.1LG02g01250 vs. TAIR 10
Match: AT4G14410.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 169.5 bits (428), Expect = 3.3e-42
Identity = 99/173 (57.23%), Postives = 123/173 (71.10%), Query Frame = 0


Query: 65  SKKRVRSDSCS-GSSSKACREKLRRDRLNEKFLTLGSILEPGRTPKTDKAAILVDAVRMV 124
           S+KR R+ SCS G  +KACRE+LRR++LNE+F+ L S+LEPGRTPKTDK AIL DA+R++
Sbjct: 119 SRKRARTGSCSRGGGTKACRERLRREKLNERFMDLSSVLEPGRTPKTDKPAILDDAIRIL 178

Query: 125 NQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAGFL 184
           NQLR EA KL+E+N  L ++IK LKAEKNELR+EK  LKADKEK EQQ+KSM A  +GF+
Sbjct: 179 NQLRDEALKLEETNQKLLEEIKSLKAEKNELREEKLVLKADKEKTEQQLKSMTAPSSGFI 238

Query: 185 PPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA 237
           P     F     A     + P  GY P   MW +MP +  DTS+D  LRPP A
Sbjct: 239 PHIPAAFNHNKMA-----VYPSYGYMP---MWHYMPQSVRDTSRDQELRPPAA 283

[Close]

BLAST of Cp4.1LG02g01250 vs. TAIR 10
Match: AT4G14410.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 169.5 bits (428), Expect = 3.3e-42
Identity = 99/173 (57.23%), Postives = 123/173 (71.10%), Query Frame = 0


Query: 65  SKKRVRSDSCS-GSSSKACREKLRRDRLNEKFLTLGSILEPGRTPKTDKAAILVDAVRMV 124
           S+KR R+ SCS G  +KACRE+LRR++LNE+F+ L S+LEPGRTPKTDK AIL DA+R++
Sbjct: 113 SRKRARTGSCSRGGGTKACRERLRREKLNERFMDLSSVLEPGRTPKTDKPAILDDAIRIL 172

Query: 125 NQLRSEAQKLKESNSSLQDKIKELKAEKNELRDEKQRLKADKEKLEQQVKSMHAHPAGFL 184
           NQLR EA KL+E+N  L ++IK LKAEKNELR+EK  LKADKEK EQQ+KSM A  +GF+
Sbjct: 173 NQLRDEALKLEETNQKLLEEIKSLKAEKNELREEKLVLKADKEKTEQQLKSMTAPSSGFI 232

Query: 185 PPPIPTFAAQSQAPGGNKLVPFIGYHPSVAMWQFMPPAAVDTSQDHVLRPPVA 237
           P     F     A     + P  GY P   MW +MP +  DTS+D  LRPP A
Sbjct: 233 PHIPAAFNHNKMA-----VYPSYGYMP---MWHYMPQSVRDTSRDQELRPPAA 277

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g01250 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FH37	4.3e-71	65.56	Transcription factor ILR3 OS=Arabidopsis thaliana OX=3702 GN=ILR3 PE=1 SV=1	[more]
Q9C682	1.4e-66	61.51	Transcription factor bHLH115 OS=Arabidopsis thaliana OX=3702 GN=BHLH115 PE=1 SV=...	[more]
Q8L467	4.6e-41	57.23	Transcription factor bHLH104 OS=Arabidopsis thaliana OX=3702 GN=BHLH104 PE=1 SV=...	[more]
Q9LTC7	3.3e-39	55.11	Transcription factor bHLH34 OS=Arabidopsis thaliana OX=3702 GN=BHLH34 PE=2 SV=1	[more]
Q9LT23	4.7e-17	40.38	Transcription factor bHLH121 OS=Arabidopsis thaliana OX=3702 GN=BHLH121 PE=1 SV=...	[more]

BLAST of Cp4.1LG02g01250 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022940189.1	6.50e-161	100.00	transcription factor ILR3-like [Cucurbita moschata] >XP_023525507.1 transcriptio...	[more]
XP_022981592.1	2.54e-158	98.31	transcription factor ILR3-like [Cucurbita maxima]	[more]
XP_038900262.1	1.12e-138	88.98	transcription factor ILR3-like [Benincasa hispida]	[more]
XP_008454561.1	4.56e-138	88.14	PREDICTED: transcription factor ILR3-like [Cucumis melo] >KAA0046455.1 transcrip...	[more]
XP_004151962.3	1.07e-136	87.29	transcription factor ILR3 [Cucumis sativus] >KAE8650684.1 hypothetical protein C...	[more]

BLAST of Cp4.1LG02g01250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FJB6	3.15e-161	100.00	transcription factor ILR3-like OS=Cucurbita moschata OX=3662 GN=LOC111445891 PE=...	[more]
A0A6J1IUE4	1.23e-158	98.31	transcription factor ILR3-like OS=Cucurbita maxima OX=3661 GN=LOC111480664 PE=4 ...	[more]
A0A5D3BHU4	2.21e-138	88.14	Transcription factor ILR3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3BYW4	2.21e-138	88.14	transcription factor ILR3-like OS=Cucumis melo OX=3656 GN=LOC103494952 PE=4 SV=1	[more]
A0A0A0L7N8	4.45e-138	88.14	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G415100 PE=4 S...	[more]

BLAST of Cp4.1LG02g01250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54680.1	3.1e-72	65.56	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G51070.1	1.0e-67	61.51	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G51070.2	1.7e-59	50.51	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G14410.1	3.3e-42	57.23	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G14410.2	3.3e-42	57.23	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 116..178
None	No IPR available	GENE3D	1.20.5.1000	arf6 gtpase in complex with a specific effector, jip4	coord: 125..178 e-value: 1.0E-5 score: 27.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..81
None	No IPR available	PANTHER	PTHR46133:SF1	TRANSCRIPTION FACTOR ILR3	coord: 1..236
None	No IPR available	CDD	cd11446	bHLH_AtILR3_like	coord: 80..155 e-value: 2.45543E-44 score: 141.702
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 81..132 e-value: 3.8E-9 score: 46.4
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 79..126 e-value: 6.3E-9 score: 35.7
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 75..126 score: 12.874469
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 66..124 e-value: 2.5E-8 score: 35.6
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 80..150
IPR044818	Transcription factor ILR3-like	PANTHER	PTHR46133	BHLH TRANSCRIPTION FACTOR	coord: 1..236

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG02g01250.1	Cp4.1LG02g01250.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055072	iron ion homeostasis
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity