Cp4.1LG02g01040 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG02g01040
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Tryptophan synthase
Location	Cp4.1LG02: 4850779 .. 4854419 (-)
RNA-Seq Expression	Cp4.1LG02g01040
Synteny	Cp4.1LG02g01040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGCCTCTGTGGAGCTTAGCTGCAAAATCCTCACCATTCCGCCGTCATCTTCTCATTCAAATTCCAAGATTTCTTCTTCTTTCTCTCGATTTCCGGTTCATTTCCGGCGATTTTTGCCCAATTCATCTCCGGTTTTCCGGTCGTGTGCCGTCACCTGCACTTTGACTAGGGAGACGTCTCTAGCAATGGAGGATAATAAAACCCAGAATCTGGGGCAGAGACCCGATTCCTTTGGGCGTTTTGGGCGTTTTGGGGGGAAGTATGTGCCCGAGACCCTAATGCATGCTCTTGCCGAGCTCGAAACCGCTTTCCATTCTCTTTCTGGAGACCAAGAATTTCAGGTTTTGGGGAATTTTGTTTTGATTTGATTTGTGAACCGTATTCTTTTTTAAGATTATTTGTTTTACTTGTTGTGATGGGTGAAGTCTTGTTTAGTGAATCTCATTTGGTTTTACTTAACCAATTGATTGTTGTTTGAGGATTTTGAATCTCATGAATGCTTATTTGATGAATAGGTTTAAGTGATAATGATTTCATAATTGATTGCTTTTTCTGGGATGGAATTCATTGGACTCTATTTGTTGCTTGAGGGATAATTGATGAAATGGAGTTTATTCGTCTGAGGATTGAGAATCTTGTGAGTGCTTGTTGTTTGAGTTTAGTTGTATTCTTGTTTGGTAGATTTGAATGAAAATGATTCTTCAATTAACTAATATTTTCTGGGAATGAAGTGTATTTATTGACAAACAGGAGGTTGTTTCTATGTAGTGTGGGTTTTAGAATCAATGTGGATTTTGACAAGGAAAAAGGGAACAATGTGCTCGAAGATTAGCATGATTCTTTCTTAACTATTGTGTTGATTTATGTTTAACTCTTTGATAAACTTAAAGAATTGAAACTTTTCTTTGTGAAGAACTTTTTTCATGTAAAATCATCACGTATGTGGATATTATTTTGGAAGAGAAGGCTTAGAGATAGTTATTAATTCCATGTTTAGAAATTCAGTAGTTTTTTTTAATAGGATGTCTAACAAAAGATTGTTTATTCTTTTTTTACCTTCTCTTTTTTATCATCAGAAAGAGCTGGATGGTATTTTGAGAGACTACGTCGGGAGAGCGAGCCCTCTATACTTTGCAGAGAGGTTGACTGAGCACTACAGACGTCCCAATGGTGAGGGGCCTCATATTTTCTTGAAGAGAGAAGATCTTAACCACACAGGGGCTCACAAGATTAATAACGCTGTTGCTCAAGCTTTGCTTGCTAAGCGTTTGGGAAAGAAACGGATTATAGCTGAAACAGGTGCAGGTCAGCATGGTGTTGCAACTGCTACTGTTTGTGCTAGGTTTGGACTAGAATGTATCATCTACATGGGCGCCCAAGACATGGAAAGACAAGCTCTCAATGTGTTCAGAATGCGGCTTCTTGGGGCCGAGGTTTGTCCGTTACAATTTTTGTTGTTTTTCTCCATTATTAATTTGCAGCCTTTGATTTGGAGGACTCTAATTTCATCATCCAAACTGTTATGATCAATTTGCACCTTCAAAACTGTGAATATCTTATTTCTGTTGAAGAATTAAGGTCCTCGAGACATCTGTGTCCCGTGCCTATTTAGGATCCCTCTAGTTTTTCTCTGATTTCATTGCTAGTTATCACTCCCTTAACCAATGAATCAAACTTTCCCTGACTCGCATCCTTAGTATGAATTTGATTTGAAGTGCATCTTATTTAGTCGAGGAAGCTGTGCGGCATGTACTGTTATTTGTTACCTAAGCTTTCCATCATTGTTGGTAGAGAAAGTTTTGCAACATGGTGACAATGTTTATATTTTTTCCAAGAATTTTCATGACGTTAAGCATTAAAAGGTCTATCCTAACAACGAATCCACAGTTGGAACCCATCCAAGGTGCCTGATGATGCCTCGTATTCTTGTAGTACTGCCTTATATGGTTTAAATAACTTCTCTTTCTTGTTTGGTCGATAGTCCTTGGCTATTTACATCTGAAAATGATCAATCAAATTATATATTATGCTTCCCTTGCAGGTTAGGCCAGTTCATTCTGGTACTGCCACACTGAAAGATGCTACTTCAGAAGCTATAAGGGATTGGGTGACTAATGTAGAGACTACCCATTATATCTTGGGATCTGTTGCTGGGCCCCATCCATATCCCATGATGGTTAGAGATTTTCATGCAGTGATTGGTAAAGAAACAAGACAACAGGCCTTGGAGAAGTGGGGAGGGAAGCCTGATGTTCTAGTGGCCTGTGTTGGAGGAGGTTCGAACGCTATGGGACTATTTCATGAGTTTGTTAATGACAAAGATGTTAGGTTGGTTGGTGTCGAGGCTGCAGGTTTTGGCGTGGATAGTGGTAAGCATGCAGCAACTCTGACCAAAGGGGAAATCGGAGTTCTACATGGAGCCATGAGTTATTTACTACAGGATGACGATGGTCAAATAATTGAACCTCATTCGATCAGTGCAGGGTAGGGGATATACGCAATCTTCTTGCTATGAGGAGGTTAGCCTTTTGTTCCAGCTTGCTCCTTTCTAGTTTAATGCATGTTTTCTTCTTTGTCGTCTGCAGTTTGGATTACCCTGGGGTTGGACCAGAGCATAGTTATTTGAAGGATGCAGGTCGTGCCGAGTACTACAGTGTCACTGATGACGAAGCACTGGAAGGTACTGGATTGCCATTATTCGTTTCTGGGTATTTTTTTGTTAGATATGTCACCCATATATTGTAAAGTTCTCTTTTTATTCTTGAAACTACACTATTCATTTAGGTAAACGTATCGATAGTCATCAATTACAATCACTTTTCTCTGCTCTGTTCAATATGTTTCTTTCTTTCTTTTCGGGCTCAGTTTTGTGAACCGTGGTTCGGCATATGCTCAAAACCAAATATCTTGGTTCGTTTTAAGGTTTTTCTGATGAGAAATTATCTGTTCTTTCATGAAATTTCCAATAACATTTGTGCCAATATATCGACGGTTGTCAATCTCGCCTTCGTCTATTGTTCTCCTGATCATTAGAGATATTAAATTCACAATCTGGCTTGTGACTGCAGCTTTCAAGAGATTGTCACGGTTGGAGGGCATAATCCCAGCTCTGGAGACATCTCATGCTCTGGCTTATCTCGAGAAGCTGTGCCCGACCCTAGCGGACGGAACAAAGGTCGTGCTTAACTGCAGTGGCAGAGGTGATAAGGATGTTCACACAGCGATCAAGCATTTGCAAGTTTGATATATAACAATGTTGCTGCCAGTAGTAGCAAGACTAAAGGTTATCCATCATCTTCCTTCCTTGGTAGAAGCTTAAGTCTTAATTGAGTTGCTTTCCAATATGAGATCTGAGCTTGAAGACAATAAAGCATACCTTAAATGCCGTAGTTTCCATACAAGTTTGGATTTAGATACACAGATTCTGGCAAAAGAAAAAAAAAATCTAAGAGCTCTTGTGAGGATATATATATATAGATTTTACTATTTCTGGATCTTATTAGACACTTGCGTATGCAGTTTTAATAAATACTAGTCTGTGTTTGTGTTTGGATCACTATGCTGTATAAAGATTGTGCTTTGTTATGATCCTCATCTACACTGACATGTTTGATCTCTTGATGTTTGAACTTGGTTT

mRNA sequence

ATGGTTGCCTCTGTGGAGCTTAGCTGCAAAATCCTCACCATTCCGCCGTCATCTTCTCATTCAAATTCCAAGATTTCTTCTTCTTTCTCTCGATTTCCGGTTCATTTCCGGCGATTTTTGCCCAATTCATCTCCGAAAGAGCTGGATGGTATTTTGAGAGACTACGTCGGGAGAGCGAGCCCTCTATACTTTGCAGAGAGGTTGACTGAGCACTACAGACGTCCCAATGGTGAGGGGCCTCATATTTTCTTGAAGAGAGAAGATCTTAACCACACAGGGGCTCACAAGATTAATAACGCTGTTGCTCAAGCTTTGCTTGCTAAGCGTTTGGGAAAGAAACGGATTATAGCTGAAACAGGTGCAGGTCAGCATGGTGTTGCAACTGCTACTGTTTGTGCTAGGTTTGGACTAGAATGTATCATCTACATGGGCGCCCAAGACATGGAAAGACAAGCTCTCAATGTGTTCAGAATGCGGCTTCTTGGGGCCGAGGTTAGGCCAGTTCATTCTGGTACTGCCACACTGAAAGATGCTACTTCAGAAGCTATAAGGGATTGGGTGACTAATGTAGAGACTACCCATTATATCTTGGGATCTGTTGCTGGGCCCCATCCATATCCCATGATGGTTAGAGATTTTCATGCAGTGATTGGTAAAGAAACAAGACAACAGGCCTTGGAGAAGTGGGGAGGGAAGCCTGATGTTCTAGTGGCCTGTGTTGGAGGAGGTTCGAACGCTATGGGACTATTTCATGAGTTTGTTAATGACAAAGATGTTAGGTTGGTTGGTGTCGAGGCTGCAGGTTTTGGCGTGGATAGTGGTAAGCATGCAGCAACTCTGACCAAAGGGGAAATCGGAGTTCTACATGGAGCCATGAGTTATTTACTACAGGATGACGATGGTCAAATAATTGAACCTCATTCGATCAGTGCAGGTTTGGATTACCCTGGGGTTGGACCAGAGCATAGTTATTTGAAGGATGCAGGTCGTGCCGAGTACTACAGTGTCACTGATGACGAAGCACTGGAAGCTTTCAAGAGATTGTCACGGTTGGAGGGCATAATCCCAGCTCTGGAGACATCTCATGCTCTGGCTTATCTCGAGAAGCTGTGCCCGACCCTAGCGGACGGAACAAAGGTCGTGCTTAACTGCAGTGGCAGAGGTGATAAGGATGTTCACACAGCGATCAAGCATTTGCAAGTTTGATATATAACAATGTTGCTGCCAGTAGTAGCAAGACTAAAGGTTATCCATCATCTTCCTTCCTTGGTAGAAGCTTAAGTCTTAATTGAGTTGCTTTCCAATATGAGATCTGAGCTTGAAGACAATAAAGCATACCTTAAATGCCGTAGTTTCCATACAAGTTTGGATTTAGATACACAGATTCTGGCAAAAGAAAAAAAAAATCTAAGAGCTCTTGTGAGGATATATATATATAGATTTTACTATTTCTGGATCTTATTAGACACTTGCGTATGCAGTTTTAATAAATACTAGTCTGTGTTTGTGTTTGGATCACTATGCTGTATAAAGATTGTGCTTTGTTATGATCCTCATCTACACTGACATGTTTGATCTCTTGATGTTTGAACTTGGTTT

Coding sequence (CDS)

ATGGTTGCCTCTGTGGAGCTTAGCTGCAAAATCCTCACCATTCCGCCGTCATCTTCTCATTCAAATTCCAAGATTTCTTCTTCTTTCTCTCGATTTCCGGTTCATTTCCGGCGATTTTTGCCCAATTCATCTCCGAAAGAGCTGGATGGTATTTTGAGAGACTACGTCGGGAGAGCGAGCCCTCTATACTTTGCAGAGAGGTTGACTGAGCACTACAGACGTCCCAATGGTGAGGGGCCTCATATTTTCTTGAAGAGAGAAGATCTTAACCACACAGGGGCTCACAAGATTAATAACGCTGTTGCTCAAGCTTTGCTTGCTAAGCGTTTGGGAAAGAAACGGATTATAGCTGAAACAGGTGCAGGTCAGCATGGTGTTGCAACTGCTACTGTTTGTGCTAGGTTTGGACTAGAATGTATCATCTACATGGGCGCCCAAGACATGGAAAGACAAGCTCTCAATGTGTTCAGAATGCGGCTTCTTGGGGCCGAGGTTAGGCCAGTTCATTCTGGTACTGCCACACTGAAAGATGCTACTTCAGAAGCTATAAGGGATTGGGTGACTAATGTAGAGACTACCCATTATATCTTGGGATCTGTTGCTGGGCCCCATCCATATCCCATGATGGTTAGAGATTTTCATGCAGTGATTGGTAAAGAAACAAGACAACAGGCCTTGGAGAAGTGGGGAGGGAAGCCTGATGTTCTAGTGGCCTGTGTTGGAGGAGGTTCGAACGCTATGGGACTATTTCATGAGTTTGTTAATGACAAAGATGTTAGGTTGGTTGGTGTCGAGGCTGCAGGTTTTGGCGTGGATAGTGGTAAGCATGCAGCAACTCTGACCAAAGGGGAAATCGGAGTTCTACATGGAGCCATGAGTTATTTACTACAGGATGACGATGGTCAAATAATTGAACCTCATTCGATCAGTGCAGGTTTGGATTACCCTGGGGTTGGACCAGAGCATAGTTATTTGAAGGATGCAGGTCGTGCCGAGTACTACAGTGTCACTGATGACGAAGCACTGGAAGCTTTCAAGAGATTGTCACGGTTGGAGGGCATAATCCCAGCTCTGGAGACATCTCATGCTCTGGCTTATCTCGAGAAGCTGTGCCCGACCCTAGCGGACGGAACAAAGGTCGTGCTTAACTGCAGTGGCAGAGGTGATAAGGATGTTCACACAGCGATCAAGCATTTGCAAGTTTGA

Protein sequence

MVASVELSCKILTIPPSSSHSNSKISSSFSRFPVHFRRFLPNSSPKELDGILRDYVGRASPLYFAERLTEHYRRPNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAEVRPVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRQQALEKWGGKPDVLVACVGGGSNAMGLFHEFVNDKDVRLVGVEAAGFGVDSGKHAATLTKGEIGVLHGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDAGRAEYYSVTDDEALEAFKRLSRLEGIIPALETSHALAYLEKLCPTLADGTKVVLNCSGRGDKDVHTAIKHLQV

Homology

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BLAST of Cp4.1LG02g01040 vs. ExPASy Swiss-Prot
Match: O50046 (Tryptophan synthase beta chain 2, chloroplastic OS=Camptotheca acuminata OX=16922 GN=TSB PE=2 SV=1)

HSP 1 Score: 686.8 bits (1771), Expect = 1.5e-196
Identity = 331/356 (92.98%), Postives = 348/356 (97.75%), Query Frame = 0


Query: 46  KELDGILRDYVGRASPLYFAERLTEHYRRPNGEGPHIFLKREDLNHTGAHKINNAVAQAL 105
           KELDGIL+DYVGR SPLYFAERLT HY+RPNGEGP I+LKREDLNHTGAHKINNAVAQAL
Sbjct: 111 KELDGILKDYVGRESPLYFAERLTLHYKRPNGEGPEIYLKREDLNHTGAHKINNAVAQAL 170

Query: 106 LAKRLGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAEV 165
           LAKRLGKKRIIAETGAGQHGVATATVCARFGL+C+IYMGAQDMERQALNVFRMRLLGAEV
Sbjct: 171 LAKRLGKKRIIAETGAGQHGVATATVCARFGLQCVIYMGAQDMERQALNVFRMRLLGAEV 230

Query: 166 RPVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRQQA 225
           R VHSGTATLKDATSEAIRDWVTNVE+THYILGSVAGPHPYPMMVR+FHAVIGKETR+QA
Sbjct: 231 RAVHSGTATLKDATSEAIRDWVTNVESTHYILGSVAGPHPYPMMVREFHAVIGKETRKQA 290

Query: 226 LEKWGGKPDVLVACVGGGSNAMGLFHEFVNDKDVRLVGVEAAGFGVDSGKHAATLTKGEI 285
           LEKWGGKPDVLVACVGGGSNAMGLFHEFV+DKDVR++GVEAAGFG+DSGKHAATLTKGE+
Sbjct: 291 LEKWGGKPDVLVACVGGGSNAMGLFHEFVDDKDVRMIGVEAAGFGLDSGKHAATLTKGEV 350

Query: 286 GVLHGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDAGRAEYYSVTDDEALEAF 345
           GVLHGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHS+LKD GRAEYY  TD+EALEAF
Sbjct: 351 GVLHGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSFLKDIGRAEYYCCTDEEALEAF 410

Query: 346 KRLSRLEGIIPALETSHALAYLEKLCPTLADGTKVVLNCSGRGDKDVHTAIKHLQV 402
           KRLSRLEGIIPALETSHALA+LEKLCPTL +GTKVVLNCSGRGDKDVHTAIKHLQV
Sbjct: 411 KRLSRLEGIIPALETSHALAFLEKLCPTLPNGTKVVLNCSGRGDKDVHTAIKHLQV 466

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BLAST of Cp4.1LG02g01040 vs. ExPASy Swiss-Prot
Match: P14671 (Tryptophan synthase beta chain 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TSB1 PE=2 SV=1)

HSP 1 Score: 673.7 bits (1737), Expect = 1.3e-192
Identity = 331/388 (85.31%), Postives = 356/388 (91.75%), Query Frame = 0


Query: 14  IPPSSSHSNSKISSSFSRFPVHFRRFLPNSSPKELDGILRDYVGRASPLYFAERLTEHYR 73
           +P +  H+ S++ S+F      +     +   +EL GIL+DYVGR SPLYFAERLTEHYR
Sbjct: 89  VPETLMHALSELESAF------YALATDDDFQRELAGILKDYVGRESPLYFAERLTEHYR 148

Query: 74  RPNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCA 133
           R NGEGP I+LKREDLNHTGAHKINNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCA
Sbjct: 149 RENGEGPLIYLKREDLNHTGAHKINNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCA 208

Query: 134 RFGLECIIYMGAQDMERQALNVFRMRLLGAEVRPVHSGTATLKDATSEAIRDWVTNVETT 193
           RFGLECIIYMGAQDMERQALNVFRMRLLGAEVR VHSGTATLKDATSEAIRDWVTNVETT
Sbjct: 209 RFGLECIIYMGAQDMERQALNVFRMRLLGAEVRGVHSGTATLKDATSEAIRDWVTNVETT 268

Query: 194 HYILGSVAGPHPYPMMVRDFHAVIGKETRQQALEKWGGKPDVLVACVGGGSNAMGLFHEF 253
           HYILGSVAGPHPYPMMVRDFHAVIGKETR+QALEKWGGKPDVLVACVGGGSNAMGLFHEF
Sbjct: 269 HYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKWGGKPDVLVACVGGGSNAMGLFHEF 328

Query: 254 VNDKDVRLVGVEAAGFGVDSGKHAATLTKGEIGVLHGAMSYLLQDDDGQIIEPHSISAGL 313
           VND +VR++GVEAAGFG+DSGKHAATLTKG++GVLHGAMSYLLQDDDGQIIEPHSISAGL
Sbjct: 329 VNDTEVRMIGVEAAGFGLDSGKHAATLTKGDVGVLHGAMSYLLQDDDGQIIEPHSISAGL 388

Query: 314 DYPGVGPEHSYLKDAGRAEYYSVTDDEALEAFKRLSRLEGIIPALETSHALAYLEKLCPT 373
           DYPGVGPEHS+ KD GRAEYYS+TD+EALEAFKR+SRLEGIIPALETSHALAYLEKLCPT
Sbjct: 389 DYPGVGPEHSFFKDMGRAEYYSITDEEALEAFKRVSRLEGIIPALETSHALAYLEKLCPT 448

Query: 374 LADGTKVVLNCSGRGDKDVHTAIKHLQV 402
           L+DGT+VVLN SGRGDKDV T  K+L V
Sbjct: 449 LSDGTRVVLNFSGRGDKDVQTVAKYLDV 470

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BLAST of Cp4.1LG02g01040 vs. ExPASy Swiss-Prot
Match: P25269 (Tryptophan synthase beta chain 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TSB2 PE=1 SV=2)

HSP 1 Score: 665.6 bits (1716), Expect = 3.5e-190
Identity = 327/388 (84.28%), Postives = 356/388 (91.75%), Query Frame = 0


Query: 14  IPPSSSHSNSKISSSFSRFPVHFRRFLPNSSPKELDGILRDYVGRASPLYFAERLTEHYR 73
           +P +  H+ S++ ++F      +         +EL  IL+DYVGR SPLYFAERLTEHYR
Sbjct: 94  VPETLMHALSELETAF------YSLATDEDFQRELAEILKDYVGRESPLYFAERLTEHYR 153

Query: 74  RPNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCA 133
           R NGEGP I+LKREDLNHTGAHKINNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCA
Sbjct: 154 RENGEGPLIYLKREDLNHTGAHKINNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCA 213

Query: 134 RFGLECIIYMGAQDMERQALNVFRMRLLGAEVRPVHSGTATLKDATSEAIRDWVTNVETT 193
           RFGL+CIIYMGAQDMERQALNVFRMRLLGAEVR VHSGTATLKDATSEAIRDWVTNVETT
Sbjct: 214 RFGLQCIIYMGAQDMERQALNVFRMRLLGAEVRGVHSGTATLKDATSEAIRDWVTNVETT 273

Query: 194 HYILGSVAGPHPYPMMVRDFHAVIGKETRQQALEKWGGKPDVLVACVGGGSNAMGLFHEF 253
           HYILGSVAGPHPYPMMVRDFHAVIGKETR+QA+EKWGGKPDVLVACVGGGSNAMGLFHEF
Sbjct: 274 HYILGSVAGPHPYPMMVRDFHAVIGKETRKQAMEKWGGKPDVLVACVGGGSNAMGLFHEF 333

Query: 254 VNDKDVRLVGVEAAGFGVDSGKHAATLTKGEIGVLHGAMSYLLQDDDGQIIEPHSISAGL 313
           V+D +VR++GVEAAGFG+DSGKHAATLTKG++GVLHGAMSYLLQDDDGQIIEPHSISAGL
Sbjct: 334 VDDTEVRMIGVEAAGFGLDSGKHAATLTKGDVGVLHGAMSYLLQDDDGQIIEPHSISAGL 393

Query: 314 DYPGVGPEHSYLKDAGRAEYYSVTDDEALEAFKRLSRLEGIIPALETSHALAYLEKLCPT 373
           DYPGVGPEHS+LKD GRAEY+SVTD+EALEAFKR+SRLEGIIPALETSHALA+LEKLCPT
Sbjct: 394 DYPGVGPEHSFLKDVGRAEYFSVTDEEALEAFKRVSRLEGIIPALETSHALAHLEKLCPT 453

Query: 374 LADGTKVVLNCSGRGDKDVHTAIKHLQV 402
           L DG +VVLN SGRGDKDV TAIK+L+V
Sbjct: 454 LPDGARVVLNFSGRGDKDVQTAIKYLEV 475

[Close]

BLAST of Cp4.1LG02g01040 vs. ExPASy Swiss-Prot
Match: P43284 (Tryptophan synthase beta chain 2, chloroplastic (Fragment) OS=Zea mays OX=4577 GN=TSB2 PE=2 SV=1)

HSP 1 Score: 657.5 bits (1695), Expect = 9.5e-188
Identity = 321/388 (82.73%), Postives = 352/388 (90.72%), Query Frame = 0


Query: 14  IPPSSSHSNSKISSSFSRFPVHFRRFLPNSSPKELDGILRDYVGRASPLYFAERLTEHYR 73
           +P +  H+ +++ S+F            +   KELDGIL+DYVGR SPLYFAERLTEHY+
Sbjct: 62  VPETLMHALTELESAFHALAT------DDEFQKELDGILKDYVGRESPLYFAERLTEHYK 121

Query: 74  RPNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCA 133
           R +G GP I+LKREDLNHTGAHKINNAVAQALLAKRLGK+RIIAETGAGQHGVATATVC 
Sbjct: 122 RADGTGPLIYLKREDLNHTGAHKINNAVAQALLAKRLGKQRIIAETGAGQHGVATATVCR 181

Query: 134 RFGLECIIYMGAQDMERQALNVFRMRLLGAEVRPVHSGTATLKDATSEAIRDWVTNVETT 193
           RFGL+CIIYMGAQDMERQALNVFRMRLLGAEVR VHSGTATLKDATSEAIRDWVTNVETT
Sbjct: 182 RFGLQCIIYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAIRDWVTNVETT 241

Query: 194 HYILGSVAGPHPYPMMVRDFHAVIGKETRQQALEKWGGKPDVLVACVGGGSNAMGLFHEF 253
           HYILGSVAGPHPYPMMVR+FH VIGKETR+QA++KWGGKPDVLVACVGGGSNAMGLFHEF
Sbjct: 242 HYILGSVAGPHPYPMMVREFHKVIGKETRRQAMDKWGGKPDVLVACVGGGSNAMGLFHEF 301

Query: 254 VNDKDVRLVGVEAAGFGVDSGKHAATLTKGEIGVLHGAMSYLLQDDDGQIIEPHSISAGL 313
           V D+DVRLVG+EAAG GVD+ KHAATLTKG++GVLHG+MSYLLQDDDGQ+IEPHSISAGL
Sbjct: 302 VEDQDVRLVGLEAAGHGVDTDKHAATLTKGQVGVLHGSMSYLLQDDDGQVIEPHSISAGL 361

Query: 314 DYPGVGPEHSYLKDAGRAEYYSVTDDEALEAFKRLSRLEGIIPALETSHALAYLEKLCPT 373
           DYPGVGPEHS+LKD GRAEY SVTD EAL+AFKR+SRLEGIIPALETSHALAYLEKLCPT
Sbjct: 362 DYPGVGPEHSFLKDIGRAEYDSVTDQEALDAFKRVSRLEGIIPALETSHALAYLEKLCPT 421

Query: 374 LADGTKVVLNCSGRGDKDVHTAIKHLQV 402
           LADG +VV+NCSGRGDKDVHTA K+L V
Sbjct: 422 LADGVRVVVNCSGRGDKDVHTASKYLDV 443

[Close]

BLAST of Cp4.1LG02g01040 vs. ExPASy Swiss-Prot
Match: P43283 (Tryptophan synthase beta chain 1 (Fragment) OS=Zea mays OX=4577 GN=TSB1 PE=2 SV=1)

HSP 1 Score: 654.1 bits (1686), Expect = 1.1e-186
Identity = 319/388 (82.22%), Postives = 350/388 (90.21%), Query Frame = 0


Query: 14  IPPSSSHSNSKISSSFSRFPVHFRRFLPNSSPKELDGILRDYVGRASPLYFAERLTEHYR 73
           +P +  H+ +++ ++F            +   KELDGIL+DYVGR SPLYFAERLTEHY+
Sbjct: 8   VPETLMHALTELENAFHALAT------DDEFQKELDGILKDYVGRESPLYFAERLTEHYK 67

Query: 74  RPNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCA 133
           R +G GP I+LKREDLNH GAHKINNAVAQALLAKRLGK+RIIAETGAGQHGVATATVCA
Sbjct: 68  RADGTGPLIYLKREDLNHRGAHKINNAVAQALLAKRLGKQRIIAETGAGQHGVATATVCA 127

Query: 134 RFGLECIIYMGAQDMERQALNVFRMRLLGAEVRPVHSGTATLKDATSEAIRDWVTNVETT 193
           RFGL+CIIYMGAQDMERQALNVFRM+LLGAEVR VHSGTATLKDATSEAIRDWVTNVETT
Sbjct: 128 RFGLQCIIYMGAQDMERQALNVFRMKLLGAEVRAVHSGTATLKDATSEAIRDWVTNVETT 187

Query: 194 HYILGSVAGPHPYPMMVRDFHAVIGKETRQQALEKWGGKPDVLVACVGGGSNAMGLFHEF 253
           HYILGSVAGPHPYPMMVR+FH VIGKETR+QA+ KWGGKPDVLVACVGGGSNAMGLFHEF
Sbjct: 188 HYILGSVAGPHPYPMMVREFHKVIGKETRRQAMHKWGGKPDVLVACVGGGSNAMGLFHEF 247

Query: 254 VNDKDVRLVGVEAAGFGVDSGKHAATLTKGEIGVLHGAMSYLLQDDDGQIIEPHSISAGL 313
           V D+DVRL+GVEAAG GVD+ KHAATLTKG++GVLHG+MSYLLQDDDGQ+IEPHSISAGL
Sbjct: 248 VEDQDVRLIGVEAAGHGVDTDKHAATLTKGQVGVLHGSMSYLLQDDDGQVIEPHSISAGL 307

Query: 314 DYPGVGPEHSYLKDAGRAEYYSVTDDEALEAFKRLSRLEGIIPALETSHALAYLEKLCPT 373
           DYPGVGPEHS+LKD GRAEY SVTD EAL+AFKR+SRLEGIIPALETSHALAYLEKLCPT
Sbjct: 308 DYPGVGPEHSFLKDIGRAEYDSVTDQEALDAFKRVSRLEGIIPALETSHALAYLEKLCPT 367

Query: 374 LADGTKVVLNCSGRGDKDVHTAIKHLQV 402
           L DG +VVLNCSGRGDKDVHTA K+L V
Sbjct: 368 LPDGVRVVLNCSGRGDKDVHTASKYLDV 389

[Close]

BLAST of Cp4.1LG02g01040 vs. NCBI nr
Match: XP_023525089.1 (tryptophan synthase beta chain 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 775 bits (2000), Expect = 7.01e-281
Identity = 401/471 (85.14%), Postives = 401/471 (85.14%), Query Frame = 0


Query: 1   MVASVELSCKILTIPPSSSHSNSKISSSFSRFPVHFRRFLPNSSP--------------- 60
           MVASVELSCKILTIPPSSSHSNSKISSSFSRFPVHFRRFLPNSSP               
Sbjct: 1   MVASVELSCKILTIPPSSSHSNSKISSSFSRFPVHFRRFLPNSSPVFRSCAVTCTLTRET 60

Query: 61  -------------------------------------------------------KELDG 120
                                                                  KELDG
Sbjct: 61  SLAMEDNKTQNLGQRPDSFGRFGRFGGKYVPETLMHALAELETAFHSLSGDQEFQKELDG 120

Query: 121 ILRDYVGRASPLYFAERLTEHYRRPNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKRL 180
           ILRDYVGRASPLYFAERLTEHYRRPNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKRL
Sbjct: 121 ILRDYVGRASPLYFAERLTEHYRRPNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKRL 180

Query: 181 GKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAEVRPVHS 240
           GKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAEVRPVHS
Sbjct: 181 GKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAEVRPVHS 240

Query: 241 GTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRQQALEKWG 300
           GTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRQQALEKWG
Sbjct: 241 GTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRQQALEKWG 300

Query: 301 GKPDVLVACVGGGSNAMGLFHEFVNDKDVRLVGVEAAGFGVDSGKHAATLTKGEIGVLHG 360
           GKPDVLVACVGGGSNAMGLFHEFVNDKDVRLVGVEAAGFGVDSGKHAATLTKGEIGVLHG
Sbjct: 301 GKPDVLVACVGGGSNAMGLFHEFVNDKDVRLVGVEAAGFGVDSGKHAATLTKGEIGVLHG 360

Query: 361 AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDAGRAEYYSVTDDEALEAFKRLSR 401
           AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDAGRAEYYSVTDDEALEAFKRLSR
Sbjct: 361 AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDAGRAEYYSVTDDEALEAFKRLSR 420

[Close]

BLAST of Cp4.1LG02g01040 vs. NCBI nr
Match: KAG7015208.1 (Tryptophan synthase beta chain 2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 766 bits (1978), Expect = 1.57e-277
Identity = 397/471 (84.29%), Postives = 400/471 (84.93%), Query Frame = 0


Query: 1   MVASVELSCKILTIPPSSSHSNSKISSSFSRFPVHFRRFLPNSSP--------------- 60
           MVASVELSCKILTIPPSSSHSNSKISSSFSRFPVH RRFLPNSSP               
Sbjct: 1   MVASVELSCKILTIPPSSSHSNSKISSSFSRFPVHSRRFLPNSSPVFRSCAVTCTLTRET 60

Query: 61  -------------------------------------------------------KELDG 120
                                                                  KELDG
Sbjct: 61  SLAMEDNKTQNLGQRPDSFGRFGRFGGKYVPETLMHALSELETAFHSLSGDQEFQKELDG 120

Query: 121 ILRDYVGRASPLYFAERLTEHYRRPNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKRL 180
           ILRDYVGRASPLYFAERLTEHYRRPNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKRL
Sbjct: 121 ILRDYVGRASPLYFAERLTEHYRRPNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKRL 180

Query: 181 GKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAEVRPVHS 240
           GKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAEVRPVHS
Sbjct: 181 GKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAEVRPVHS 240

Query: 241 GTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRQQALEKWG 300
           GTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETR+QALEKWG
Sbjct: 241 GTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKWG 300

Query: 301 GKPDVLVACVGGGSNAMGLFHEFVNDKDVRLVGVEAAGFGVDSGKHAATLTKGEIGVLHG 360
           GKPDVLVACVGGGSNAMGLFHEFVND+DVRLVGVEAAGFGVDSGKHAATLTKGEIGVLHG
Sbjct: 301 GKPDVLVACVGGGSNAMGLFHEFVNDEDVRLVGVEAAGFGVDSGKHAATLTKGEIGVLHG 360

Query: 361 AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDAGRAEYYSVTDDEALEAFKRLSR 401
           AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDAGRAEYYSVTDDEALEAFKRLSR
Sbjct: 361 AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDAGRAEYYSVTDDEALEAFKRLSR 420

[Close]

BLAST of Cp4.1LG02g01040 vs. NCBI nr
Match: XP_022940976.1 (tryptophan synthase beta chain 1 [Cucurbita moschata])

HSP 1 Score: 762 bits (1968), Expect = 5.25e-276
Identity = 396/471 (84.08%), Postives = 399/471 (84.71%), Query Frame = 0


Query: 1   MVASVELSCKILTIPPSSSHSNSKISSSFSRFPVHFRRFLPNSSP--------------- 60
           MVASVELSCKILTIPPSSSHSNSKISSSFSRFPVH RRFL NSSP               
Sbjct: 1   MVASVELSCKILTIPPSSSHSNSKISSSFSRFPVHSRRFLLNSSPVFRSCAVTCTLTRET 60

Query: 61  -------------------------------------------------------KELDG 120
                                                                  KELDG
Sbjct: 61  SLAMEDNKTQSLGQRPDSFGRFGRFGGKYVPETLMHALSELETAFHSLSGDQEFQKELDG 120

Query: 121 ILRDYVGRASPLYFAERLTEHYRRPNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKRL 180
           ILRDYVGRASPLYFAERLTEHYRRPNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKRL
Sbjct: 121 ILRDYVGRASPLYFAERLTEHYRRPNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKRL 180

Query: 181 GKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAEVRPVHS 240
           GKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAEVRPVHS
Sbjct: 181 GKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAEVRPVHS 240

Query: 241 GTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRQQALEKWG 300
           GTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETR+QALEKWG
Sbjct: 241 GTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKWG 300

Query: 301 GKPDVLVACVGGGSNAMGLFHEFVNDKDVRLVGVEAAGFGVDSGKHAATLTKGEIGVLHG 360
           GKPDVLVACVGGGSNAMGLFHEFVND+DVRLVGVEAAGFGVDSGKHAATLTKGEIGVLHG
Sbjct: 301 GKPDVLVACVGGGSNAMGLFHEFVNDEDVRLVGVEAAGFGVDSGKHAATLTKGEIGVLHG 360

Query: 361 AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDAGRAEYYSVTDDEALEAFKRLSR 401
           AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDAGRAEYYSVTDDEALEAFKRLSR
Sbjct: 361 AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDAGRAEYYSVTDDEALEAFKRLSR 420

[Close]

BLAST of Cp4.1LG02g01040 vs. NCBI nr
Match: XP_022981463.1 (tryptophan synthase beta chain 1 [Cucurbita maxima])

HSP 1 Score: 761 bits (1965), Expect = 1.50e-275
Identity = 395/471 (83.86%), Postives = 398/471 (84.50%), Query Frame = 0


Query: 1   MVASVELSCKILTIPPSSSHSNSKISSSFSRFPVHFRRFLPNSSP--------------- 60
           MVASVELSCKILTIPPSSSHSNSKISSSFSRFPVH RRFL N SP               
Sbjct: 1   MVASVELSCKILTIPPSSSHSNSKISSSFSRFPVHSRRFLQNPSPVFRSCAVTCTLTRET 60

Query: 61  -------------------------------------------------------KELDG 120
                                                                  KELDG
Sbjct: 61  SLAMEDNKTQNLGQRPDSFGRFGRFGGKYVPETLMHALAELETAFHSLSGDQEFQKELDG 120

Query: 121 ILRDYVGRASPLYFAERLTEHYRRPNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKRL 180
           ILRDYVGRASPLYFAERLTEHYRRPNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKRL
Sbjct: 121 ILRDYVGRASPLYFAERLTEHYRRPNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKRL 180

Query: 181 GKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAEVRPVHS 240
           GKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAEVRPVHS
Sbjct: 181 GKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAEVRPVHS 240

Query: 241 GTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRQQALEKWG 300
           GTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETR+QALEKWG
Sbjct: 241 GTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKWG 300

Query: 301 GKPDVLVACVGGGSNAMGLFHEFVNDKDVRLVGVEAAGFGVDSGKHAATLTKGEIGVLHG 360
           GKPDVLVACVGGGSNAMGLFHEFVND+DVRLVGVEAAGFGVDSGKHAATLTKGEIGVLHG
Sbjct: 301 GKPDVLVACVGGGSNAMGLFHEFVNDEDVRLVGVEAAGFGVDSGKHAATLTKGEIGVLHG 360

Query: 361 AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDAGRAEYYSVTDDEALEAFKRLSR 401
           AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDAGRAEYYSVTDDEALEAFKRLSR
Sbjct: 361 AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDAGRAEYYSVTDDEALEAFKRLSR 420

[Close]

BLAST of Cp4.1LG02g01040 vs. NCBI nr
Match: XP_038899607.1 (tryptophan synthase beta chain 1 [Benincasa hispida])

HSP 1 Score: 728 bits (1879), Expect = 1.96e-262
Identity = 378/472 (80.08%), Postives = 387/472 (81.99%), Query Frame = 0


Query: 1   MVASVELSCKILTIPPSSSHSNSKISSSFSRFPVHFRRFLPNSSP--------------- 60
           MVAS  L+CKI TI PSSSHSN+KISSS SRFPVHFRR L N SP               
Sbjct: 1   MVASTALNCKIPTISPSSSHSNTKISSSNSRFPVHFRRVLSNPSPVFRSNAISCTLTREP 60

Query: 61  --------------------------------------------------------KELD 120
                                                                   KELD
Sbjct: 61  SLAMEDKLHDLNLEQRPDSFGHFGRFGGKYVPETLMHALTELETAFHSLAGDQEFQKELD 120

Query: 121 GILRDYVGRASPLYFAERLTEHYRRPNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKR 180
           GILRDYVGR SPLYFAERLTEHYRRPNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKR
Sbjct: 121 GILRDYVGRESPLYFAERLTEHYRRPNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKR 180

Query: 181 LGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAEVRPVH 240
           LGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDM+RQALNVFRMRLLGAEVRPVH
Sbjct: 181 LGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMDRQALNVFRMRLLGAEVRPVH 240

Query: 241 SGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRQQALEKW 300
           SGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETR+QALEKW
Sbjct: 241 SGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKW 300

Query: 301 GGKPDVLVACVGGGSNAMGLFHEFVNDKDVRLVGVEAAGFGVDSGKHAATLTKGEIGVLH 360
           GG PDVLVACVGGGSNAMGLFHEFVND+DVRLVGVEAAGFG+DSGKHAATLTKGE+GVLH
Sbjct: 301 GGTPDVLVACVGGGSNAMGLFHEFVNDEDVRLVGVEAAGFGLDSGKHAATLTKGEVGVLH 360

Query: 361 GAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDAGRAEYYSVTDDEALEAFKRLS 401
           GAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKD GRAEY+SVTDDEALEAFKRLS
Sbjct: 361 GAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDLGRAEYHSVTDDEALEAFKRLS 420

[Close]

BLAST of Cp4.1LG02g01040 vs. ExPASy TrEMBL
Match: A0A6J1FJV9 (Tryptophan synthase OS=Cucurbita moschata OX=3662 GN=LOC111446398 PE=3 SV=1)

HSP 1 Score: 762 bits (1968), Expect = 2.54e-276
Identity = 396/471 (84.08%), Postives = 399/471 (84.71%), Query Frame = 0


Query: 1   MVASVELSCKILTIPPSSSHSNSKISSSFSRFPVHFRRFLPNSSP--------------- 60
           MVASVELSCKILTIPPSSSHSNSKISSSFSRFPVH RRFL NSSP               
Sbjct: 1   MVASVELSCKILTIPPSSSHSNSKISSSFSRFPVHSRRFLLNSSPVFRSCAVTCTLTRET 60

Query: 61  -------------------------------------------------------KELDG 120
                                                                  KELDG
Sbjct: 61  SLAMEDNKTQSLGQRPDSFGRFGRFGGKYVPETLMHALSELETAFHSLSGDQEFQKELDG 120

Query: 121 ILRDYVGRASPLYFAERLTEHYRRPNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKRL 180
           ILRDYVGRASPLYFAERLTEHYRRPNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKRL
Sbjct: 121 ILRDYVGRASPLYFAERLTEHYRRPNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKRL 180

Query: 181 GKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAEVRPVHS 240
           GKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAEVRPVHS
Sbjct: 181 GKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAEVRPVHS 240

Query: 241 GTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRQQALEKWG 300
           GTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETR+QALEKWG
Sbjct: 241 GTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKWG 300

Query: 301 GKPDVLVACVGGGSNAMGLFHEFVNDKDVRLVGVEAAGFGVDSGKHAATLTKGEIGVLHG 360
           GKPDVLVACVGGGSNAMGLFHEFVND+DVRLVGVEAAGFGVDSGKHAATLTKGEIGVLHG
Sbjct: 301 GKPDVLVACVGGGSNAMGLFHEFVNDEDVRLVGVEAAGFGVDSGKHAATLTKGEIGVLHG 360

Query: 361 AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDAGRAEYYSVTDDEALEAFKRLSR 401
           AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDAGRAEYYSVTDDEALEAFKRLSR
Sbjct: 361 AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDAGRAEYYSVTDDEALEAFKRLSR 420

[Close]

BLAST of Cp4.1LG02g01040 vs. ExPASy TrEMBL
Match: A0A6J1J261 (Tryptophan synthase OS=Cucurbita maxima OX=3661 GN=LOC111480575 PE=3 SV=1)

HSP 1 Score: 761 bits (1965), Expect = 7.28e-276
Identity = 395/471 (83.86%), Postives = 398/471 (84.50%), Query Frame = 0


Query: 1   MVASVELSCKILTIPPSSSHSNSKISSSFSRFPVHFRRFLPNSSP--------------- 60
           MVASVELSCKILTIPPSSSHSNSKISSSFSRFPVH RRFL N SP               
Sbjct: 1   MVASVELSCKILTIPPSSSHSNSKISSSFSRFPVHSRRFLQNPSPVFRSCAVTCTLTRET 60

Query: 61  -------------------------------------------------------KELDG 120
                                                                  KELDG
Sbjct: 61  SLAMEDNKTQNLGQRPDSFGRFGRFGGKYVPETLMHALAELETAFHSLSGDQEFQKELDG 120

Query: 121 ILRDYVGRASPLYFAERLTEHYRRPNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKRL 180
           ILRDYVGRASPLYFAERLTEHYRRPNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKRL
Sbjct: 121 ILRDYVGRASPLYFAERLTEHYRRPNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKRL 180

Query: 181 GKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAEVRPVHS 240
           GKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAEVRPVHS
Sbjct: 181 GKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAEVRPVHS 240

Query: 241 GTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRQQALEKWG 300
           GTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETR+QALEKWG
Sbjct: 241 GTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKWG 300

Query: 301 GKPDVLVACVGGGSNAMGLFHEFVNDKDVRLVGVEAAGFGVDSGKHAATLTKGEIGVLHG 360
           GKPDVLVACVGGGSNAMGLFHEFVND+DVRLVGVEAAGFGVDSGKHAATLTKGEIGVLHG
Sbjct: 301 GKPDVLVACVGGGSNAMGLFHEFVNDEDVRLVGVEAAGFGVDSGKHAATLTKGEIGVLHG 360

Query: 361 AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDAGRAEYYSVTDDEALEAFKRLSR 401
           AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDAGRAEYYSVTDDEALEAFKRLSR
Sbjct: 361 AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDAGRAEYYSVTDDEALEAFKRLSR 420

[Close]

BLAST of Cp4.1LG02g01040 vs. ExPASy TrEMBL
Match: A0A6J1CDB2 (Tryptophan synthase OS=Momordica charantia OX=3673 GN=LOC111010430 PE=3 SV=1)

HSP 1 Score: 727 bits (1876), Expect = 2.34e-262
Identity = 377/468 (80.56%), Postives = 385/468 (82.26%), Query Frame = 0


Query: 1   MVASVELSCKILTIPPSSSHSNSKISSSFSRFPVHFRRFLPNSSP--------------- 60
           MVA   L+CKI T+ PSSSHSNS+ISSSFSR P+ FRR     SP               
Sbjct: 1   MVAFTALNCKIPTVSPSSSHSNSEISSSFSRLPLRFRRAASYPSPAARRCGVSCTLTTQP 60

Query: 61  ----------------------------------------------------KELDGILR 120
                                                               KELDGILR
Sbjct: 61  SLAMEDKTQTQRPDSFGRFGRFGGKYVPETLMHALTQLEAAFHSLAGDQEFQKELDGILR 120

Query: 121 DYVGRASPLYFAERLTEHYRRPNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKRLGKK 180
           DYVGR SPLYFAERLTEHYRRPNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKRLGKK
Sbjct: 121 DYVGRESPLYFAERLTEHYRRPNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKRLGKK 180

Query: 181 RIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAEVRPVHSGTA 240
           RIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAEV+PVHSGTA
Sbjct: 181 RIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAEVKPVHSGTA 240

Query: 241 TLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRQQALEKWGGKP 300
           TLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETR+QALEKWGGKP
Sbjct: 241 TLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKWGGKP 300

Query: 301 DVLVACVGGGSNAMGLFHEFVNDKDVRLVGVEAAGFGVDSGKHAATLTKGEIGVLHGAMS 360
           DVLVACVGGGSNAMGLFHEFV DKDVRLVGVEAAGFG+DSGKHAATLTKGEIGVLHGAMS
Sbjct: 301 DVLVACVGGGSNAMGLFHEFVGDKDVRLVGVEAAGFGLDSGKHAATLTKGEIGVLHGAMS 360

Query: 361 YLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDAGRAEYYSVTDDEALEAFKRLSRLEG 401
           YLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKD GRAEYYSVTDDEALEAFKRLSRLEG
Sbjct: 361 YLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDLGRAEYYSVTDDEALEAFKRLSRLEG 420

[Close]

BLAST of Cp4.1LG02g01040 vs. ExPASy TrEMBL
Match: A0A0A0M065 (Tryptophan synthase OS=Cucumis sativus OX=3659 GN=Csa_1G660140 PE=3 SV=1)

HSP 1 Score: 721 bits (1860), Expect = 7.42e-260
Identity = 375/472 (79.45%), Postives = 384/472 (81.36%), Query Frame = 0


Query: 1   MVASVELSCKILTIPPSSSHSNSKISSSFSRFPVHFRRFLPNSSP--------------- 60
           MVAS  L+CKI T  PSSSHSN+KISSS S FPV FRR   N SP               
Sbjct: 1   MVASTALNCKIPTFSPSSSHSNNKISSSTSHFPVRFRRVSSNPSPVFRSNAVSCTLTREP 60

Query: 61  --------------------------------------------------------KELD 120
                                                                   KELD
Sbjct: 61  SLAMEDKVHDSSLQQRPDSFGRFGRFGGKYVPETLMHALTELETAFYSLAGDQDFQKELD 120

Query: 121 GILRDYVGRASPLYFAERLTEHYRRPNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKR 180
           GILRDYVGR SPLYFAERLTEHYRR NGEGPHIFLKREDLNHTGAHKINNAVAQALLAKR
Sbjct: 121 GILRDYVGRESPLYFAERLTEHYRRSNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKR 180

Query: 181 LGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAEVRPVH 240
           LGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRM+LLGAEVRPVH
Sbjct: 181 LGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMQLLGAEVRPVH 240

Query: 241 SGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRQQALEKW 300
           SGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETR+QALEKW
Sbjct: 241 SGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKW 300

Query: 301 GGKPDVLVACVGGGSNAMGLFHEFVNDKDVRLVGVEAAGFGVDSGKHAATLTKGEIGVLH 360
           GGKPDVLVACVGGGSNAMGLFHEFVNDKDVRLVGVEAAGFG+DSGKHAATLTKGE+GVLH
Sbjct: 301 GGKPDVLVACVGGGSNAMGLFHEFVNDKDVRLVGVEAAGFGLDSGKHAATLTKGEVGVLH 360

Query: 361 GAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDAGRAEYYSVTDDEALEAFKRLS 401
           GAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKD GRAEY+SVTDDEALEAFKRL+
Sbjct: 361 GAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDLGRAEYHSVTDDEALEAFKRLA 420

[Close]

BLAST of Cp4.1LG02g01040 vs. ExPASy TrEMBL
Match: A0A1S3C016 (Tryptophan synthase OS=Cucumis melo OX=3656 GN=LOC103494920 PE=3 SV=1)

HSP 1 Score: 720 bits (1859), Expect = 1.05e-259
Identity = 375/472 (79.45%), Postives = 383/472 (81.14%), Query Frame = 0


Query: 1   MVASVELSCKILTIPPSSSHSNSKISSSFSRFPVHFRRFLPNSSP--------------- 60
           MVAS  L+CKI TI PS SHSN+KISSS   FPV FRR   N SP               
Sbjct: 1   MVASTALNCKIPTISPSPSHSNNKISSSIPHFPVRFRRVSSNPSPLLRSNAVSCTLTREP 60

Query: 61  --------------------------------------------------------KELD 120
                                                                   KELD
Sbjct: 61  SLAMEDKLHTLSLQQRPDSFGRFGRFGGKYVPETLMHALTELEAAFYSLAGDQDFQKELD 120

Query: 121 GILRDYVGRASPLYFAERLTEHYRRPNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKR 180
           GILRDYVGR SPLYFAERLTEHYRR NGEGPHIFLKREDLNHTGAHKINNAVAQALLAKR
Sbjct: 121 GILRDYVGRESPLYFAERLTEHYRRSNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKR 180

Query: 181 LGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAEVRPVH 240
           LGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAEVRPVH
Sbjct: 181 LGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAEVRPVH 240

Query: 241 SGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRQQALEKW 300
           SGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETR+QALEKW
Sbjct: 241 SGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKW 300

Query: 301 GGKPDVLVACVGGGSNAMGLFHEFVNDKDVRLVGVEAAGFGVDSGKHAATLTKGEIGVLH 360
           GGKPDVLVACVGGGSNAMGLFHEFVND+DVRLVGVEAAGFG+DSGKHAATLTKGE+GVLH
Sbjct: 301 GGKPDVLVACVGGGSNAMGLFHEFVNDEDVRLVGVEAAGFGLDSGKHAATLTKGEVGVLH 360

Query: 361 GAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDAGRAEYYSVTDDEALEAFKRLS 401
           GAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKD GRAEY+SVTDDEALEAFKRLS
Sbjct: 361 GAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDLGRAEYHSVTDDEALEAFKRLS 420

[Close]

BLAST of Cp4.1LG02g01040 vs. TAIR 10
Match: AT5G54810.1 (tryptophan synthase beta-subunit 1 )

HSP 1 Score: 673.7 bits (1737), Expect = 9.1e-194
Identity = 331/388 (85.31%), Postives = 356/388 (91.75%), Query Frame = 0


Query: 14  IPPSSSHSNSKISSSFSRFPVHFRRFLPNSSPKELDGILRDYVGRASPLYFAERLTEHYR 73
           +P +  H+ S++ S+F      +     +   +EL GIL+DYVGR SPLYFAERLTEHYR
Sbjct: 89  VPETLMHALSELESAF------YALATDDDFQRELAGILKDYVGRESPLYFAERLTEHYR 148

Query: 74  RPNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCA 133
           R NGEGP I+LKREDLNHTGAHKINNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCA
Sbjct: 149 RENGEGPLIYLKREDLNHTGAHKINNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCA 208

Query: 134 RFGLECIIYMGAQDMERQALNVFRMRLLGAEVRPVHSGTATLKDATSEAIRDWVTNVETT 193
           RFGLECIIYMGAQDMERQALNVFRMRLLGAEVR VHSGTATLKDATSEAIRDWVTNVETT
Sbjct: 209 RFGLECIIYMGAQDMERQALNVFRMRLLGAEVRGVHSGTATLKDATSEAIRDWVTNVETT 268

Query: 194 HYILGSVAGPHPYPMMVRDFHAVIGKETRQQALEKWGGKPDVLVACVGGGSNAMGLFHEF 253
           HYILGSVAGPHPYPMMVRDFHAVIGKETR+QALEKWGGKPDVLVACVGGGSNAMGLFHEF
Sbjct: 269 HYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKWGGKPDVLVACVGGGSNAMGLFHEF 328

Query: 254 VNDKDVRLVGVEAAGFGVDSGKHAATLTKGEIGVLHGAMSYLLQDDDGQIIEPHSISAGL 313
           VND +VR++GVEAAGFG+DSGKHAATLTKG++GVLHGAMSYLLQDDDGQIIEPHSISAGL
Sbjct: 329 VNDTEVRMIGVEAAGFGLDSGKHAATLTKGDVGVLHGAMSYLLQDDDGQIIEPHSISAGL 388

Query: 314 DYPGVGPEHSYLKDAGRAEYYSVTDDEALEAFKRLSRLEGIIPALETSHALAYLEKLCPT 373
           DYPGVGPEHS+ KD GRAEYYS+TD+EALEAFKR+SRLEGIIPALETSHALAYLEKLCPT
Sbjct: 389 DYPGVGPEHSFFKDMGRAEYYSITDEEALEAFKRVSRLEGIIPALETSHALAYLEKLCPT 448

Query: 374 LADGTKVVLNCSGRGDKDVHTAIKHLQV 402
           L+DGT+VVLN SGRGDKDV T  K+L V
Sbjct: 449 LSDGTRVVLNFSGRGDKDVQTVAKYLDV 470

[Close]

BLAST of Cp4.1LG02g01040 vs. TAIR 10
Match: AT4G27070.1 (tryptophan synthase beta-subunit 2 )

HSP 1 Score: 665.6 bits (1716), Expect = 2.5e-191
Identity = 327/388 (84.28%), Postives = 356/388 (91.75%), Query Frame = 0


Query: 14  IPPSSSHSNSKISSSFSRFPVHFRRFLPNSSPKELDGILRDYVGRASPLYFAERLTEHYR 73
           +P +  H+ S++ ++F      +         +EL  IL+DYVGR SPLYFAERLTEHYR
Sbjct: 94  VPETLMHALSELETAF------YSLATDEDFQRELAEILKDYVGRESPLYFAERLTEHYR 153

Query: 74  RPNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCA 133
           R NGEGP I+LKREDLNHTGAHKINNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCA
Sbjct: 154 RENGEGPLIYLKREDLNHTGAHKINNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCA 213

Query: 134 RFGLECIIYMGAQDMERQALNVFRMRLLGAEVRPVHSGTATLKDATSEAIRDWVTNVETT 193
           RFGL+CIIYMGAQDMERQALNVFRMRLLGAEVR VHSGTATLKDATSEAIRDWVTNVETT
Sbjct: 214 RFGLQCIIYMGAQDMERQALNVFRMRLLGAEVRGVHSGTATLKDATSEAIRDWVTNVETT 273

Query: 194 HYILGSVAGPHPYPMMVRDFHAVIGKETRQQALEKWGGKPDVLVACVGGGSNAMGLFHEF 253
           HYILGSVAGPHPYPMMVRDFHAVIGKETR+QA+EKWGGKPDVLVACVGGGSNAMGLFHEF
Sbjct: 274 HYILGSVAGPHPYPMMVRDFHAVIGKETRKQAMEKWGGKPDVLVACVGGGSNAMGLFHEF 333

Query: 254 VNDKDVRLVGVEAAGFGVDSGKHAATLTKGEIGVLHGAMSYLLQDDDGQIIEPHSISAGL 313
           V+D +VR++GVEAAGFG+DSGKHAATLTKG++GVLHGAMSYLLQDDDGQIIEPHSISAGL
Sbjct: 334 VDDTEVRMIGVEAAGFGLDSGKHAATLTKGDVGVLHGAMSYLLQDDDGQIIEPHSISAGL 393

Query: 314 DYPGVGPEHSYLKDAGRAEYYSVTDDEALEAFKRLSRLEGIIPALETSHALAYLEKLCPT 373
           DYPGVGPEHS+LKD GRAEY+SVTD+EALEAFKR+SRLEGIIPALETSHALA+LEKLCPT
Sbjct: 394 DYPGVGPEHSFLKDVGRAEYFSVTDEEALEAFKRVSRLEGIIPALETSHALAHLEKLCPT 453

Query: 374 LADGTKVVLNCSGRGDKDVHTAIKHLQV 402
           L DG +VVLN SGRGDKDV TAIK+L+V
Sbjct: 454 LPDGARVVLNFSGRGDKDVQTAIKYLEV 475

[Close]

BLAST of Cp4.1LG02g01040 vs. TAIR 10
Match: AT5G28237.1 (Pyridoxal-5'-phosphate-dependent enzyme family protein )

HSP 1 Score: 499.6 bits (1285), Expect = 2.4e-141
Identity = 238/355 (67.04%), Postives = 295/355 (83.10%), Query Frame = 0


Query: 46  KELDGILRDYVGRASPLYFAERLTEHYRR--PNGE-GPHIFLKREDLNHTGAHKINNAVA 105
           +EL   LRDYVGR +PLYFAERLTEHY+   P  E GP I+LKREDL+H G+HKINNA+A
Sbjct: 106 EELTTALRDYVGRETPLYFAERLTEHYKNIVPTIEGGPEIYLKREDLSHCGSHKINNALA 165

Query: 106 QALLAKRLGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLG 165
           QA++++RLG  R++A TGAGQHGVATA  CA+  LEC ++MGA D+E+Q+ NV  M+LLG
Sbjct: 166 QAMISRRLGCSRVVAATGAGQHGVATAAACAKLSLECTVFMGAADIEKQSFNVLSMKLLG 225

Query: 166 AEVRPVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETR 225
           A+V  V     T KDA+SEAIR+WV N+ TT+Y+ G+V GPHP P++VR+F +VIGKETR
Sbjct: 226 AQVISVE---GTFKDASSEAIRNWVENLYTTYYLSGTVVGPHPCPIIVREFQSVIGKETR 285

Query: 226 QQALEKWGGKPDVLVACVGGGSNAMGLFHEFVNDKDVRLVGVEAAGFGVDSGKHAATLTK 285
           +QA + WGGKPDVLVACVG GSNA+GLFHEFV D+DVRLVGVEAAG G+DSGKH+ATL  
Sbjct: 286 RQAKQLWGGKPDVLVACVGSGSNALGLFHEFVGDEDVRLVGVEAAGLGLDSGKHSATLAF 345

Query: 286 GEIGVLHGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDAGRAEYYSVTDDEAL 345
           G++GV HG+MSYLLQDD GQI++PHS+  GL+YPGVGPE S++K+ GRAE+Y+ TD+EA+
Sbjct: 346 GDVGVYHGSMSYLLQDDQGQILKPHSVGVGLEYPGVGPEISFMKETGRAEFYTATDEEAI 405

Query: 346 EAFKRLSRLEGIIPALETSHALAYLEKLCPTLADGTKVVLNCSGRGDKDVHTAIK 398
           +A  RLSRLEGIIPALE SHALA+L+KL PTL DG KVV+NCSGRGDKD+ T I+
Sbjct: 406 QACMRLSRLEGIIPALEASHALAFLDKLVPTLRDGAKVVVNCSGRGDKDLDTLIQ 457

[Close]

BLAST of Cp4.1LG02g01040 vs. TAIR 10
Match: AT5G38530.1 (tryptophan synthase beta type 2 )

HSP 1 Score: 130.6 bits (327), Expect = 2.9e-30
Identity = 111/366 (30.33%), Postives = 162/366 (44.26%), Query Frame = 0


Query: 58  RASPLYFAERLTEHYRRPNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKRLGKKRIIA 117
           R +PL  A+RL +  + P      I+ K E  +  G+HK N AV QA    + G K ++ 
Sbjct: 132 RPTPLIRAKRLEKLLQTP----ARIYFKYEGGSPAGSHKPNTAVPQAYYNAKEGVKNVVT 191

Query: 118 ETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAEVRPV--------- 177
           ETGAGQ G + A   + FGL+C ++  A     +      M+  GA+V P          
Sbjct: 192 ETGAGQWGSSLAFASSLFGLDCEVWQVANSYHTKPYRRLMMQTWGAKVHPSPSDLTEAGR 251

Query: 178 ------HSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETR 237
                  S   +L  A SEA+     N E T Y LGSV         V     +IG+E  
Sbjct: 252 RILESDPSSPGSLGIAISEAVEVAARN-EDTKYCLGSVLN------HVLLHQTIIGEECI 311

Query: 238 QQALEKWGGKPDVLVACVGGGSNAMGLFHEFVNDKDVRLVGVEAAGFGVDSGKHAATLTK 297
           QQ +E +G  PD+++ C GGGSN  GL   F+ +K   L G               +LTK
Sbjct: 312 QQ-MENFGETPDLIIGCTGGGSNFAGLSFPFIREK---LKGKINPVIRAVEPSACPSLTK 371

Query: 298 G----EIGVLHGAMSYLLQDDDGQIIEPHSISA-GLDYPGVGPEHSYLKDAGRAEYYSVT 357
           G    + G   G    +     G    P  I A GL Y G+ P  S++ + G  E  S+ 
Sbjct: 372 GVYAYDFGDTAGLTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLISHVYEQGFMEAISIP 431

Query: 358 DDEALEAFKRLSRLEGIIPALETSHALAYLEK---LCPTLADGTKVVLNCSGRGDKDVHT 401
             E  +   + +R EGIIPA E +HA+A   +    C    +   +++   G G  D+ +
Sbjct: 432 QIECFQGAIQFARTEGIIPAPEPTHAIAATIREALRCKETGEAKVILMAMCGHGHFDLTS 482

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g01040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O50046	1.5e-196	92.98	Tryptophan synthase beta chain 2, chloroplastic OS=Camptotheca acuminata OX=1692...	[more]
P14671	1.3e-192	85.31	Tryptophan synthase beta chain 1, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
P25269	3.5e-190	84.28	Tryptophan synthase beta chain 2, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
P43284	9.5e-188	82.73	Tryptophan synthase beta chain 2, chloroplastic (Fragment) OS=Zea mays OX=4577 G...	[more]
P43283	1.1e-186	82.22	Tryptophan synthase beta chain 1 (Fragment) OS=Zea mays OX=4577 GN=TSB1 PE=2 SV=...	[more]

BLAST of Cp4.1LG02g01040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023525089.1	7.01e-281	85.14	tryptophan synthase beta chain 1 [Cucurbita pepo subsp. pepo]	[more]
KAG7015208.1	1.57e-277	84.29	Tryptophan synthase beta chain 2, chloroplastic [Cucurbita argyrosperma subsp. a...	[more]
XP_022940976.1	5.25e-276	84.08	tryptophan synthase beta chain 1 [Cucurbita moschata]	[more]
XP_022981463.1	1.50e-275	83.86	tryptophan synthase beta chain 1 [Cucurbita maxima]	[more]
XP_038899607.1	1.96e-262	80.08	tryptophan synthase beta chain 1 [Benincasa hispida]	[more]

BLAST of Cp4.1LG02g01040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FJV9	2.54e-276	84.08	Tryptophan synthase OS=Cucurbita moschata OX=3662 GN=LOC111446398 PE=3 SV=1	[more]
A0A6J1J261	7.28e-276	83.86	Tryptophan synthase OS=Cucurbita maxima OX=3661 GN=LOC111480575 PE=3 SV=1	[more]
A0A6J1CDB2	2.34e-262	80.56	Tryptophan synthase OS=Momordica charantia OX=3673 GN=LOC111010430 PE=3 SV=1	[more]
A0A0A0M065	7.42e-260	79.45	Tryptophan synthase OS=Cucumis sativus OX=3659 GN=Csa_1G660140 PE=3 SV=1	[more]
A0A1S3C016	1.05e-259	79.45	Tryptophan synthase OS=Cucumis melo OX=3656 GN=LOC103494920 PE=3 SV=1	[more]

BLAST of Cp4.1LG02g01040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54810.1	9.1e-194	85.31	tryptophan synthase beta-subunit 1	[more]
AT4G27070.1	2.5e-191	84.28	tryptophan synthase beta-subunit 2	[more]
AT5G28237.1	2.4e-141	67.04	Pyridoxal-5'-phosphate-dependent enzyme family protein	[more]
AT5G38530.1	2.9e-30	30.33	tryptophan synthase beta type 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036052	Tryptophan synthase beta subunit-like PLP-dependent enzyme	GENE3D	3.40.50.1100		coord: 57..392 e-value: 1.3E-182 score: 608.7
IPR036052	Tryptophan synthase beta subunit-like PLP-dependent enzyme	GENE3D	3.40.50.1100		coord: 46..214 e-value: 1.3E-182 score: 608.7
IPR036052	Tryptophan synthase beta subunit-like PLP-dependent enzyme	SUPERFAMILY	53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes	coord: 44..398
IPR006654	Tryptophan synthase, beta chain	TIGRFAM	TIGR00263	TIGR00263	coord: 46..398 e-value: 4.1E-172 score: 570.5
IPR006654	Tryptophan synthase, beta chain	CDD	cd06446	Trp-synth_B	coord: 45..394 e-value: 0.0 score: 661.538
IPR001926	Pyridoxal-phosphate dependent enzyme	PFAM	PF00291	PALP	coord: 57..386 e-value: 5.1E-49 score: 167.3
IPR023026	Tryptophan synthase beta chain/beta chain-like	PIRSF	PIRSF001413	Trp_syn_beta	coord: 16..401 e-value: 3.3E-155 score: 515.2
IPR023026	Tryptophan synthase beta chain/beta chain-like	HAMAP	MF_00133	Trp_synth_beta	coord: 4..399 score: 49.076519
None	No IPR available	PIRSR	PIRSR006278-2	PIRSR006278-2	coord: 80..266 e-value: 8.6E-10 score: 36.4
None	No IPR available	PANTHER	PTHR48077:SF8	TRYPTOPHAN SYNTHASE BETA CHAIN 1, CHLOROPLASTIC-RELATED	coord: 45..401
None	No IPR available	PANTHER	PTHR48077	TRYPTOPHAN SYNTHASE-RELATED	coord: 45..401
IPR006653	Tryptophan synthase, beta chain, conserved site	PROSITE	PS00168	TRP_SYNTHASE_BETA	coord: 89..103

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG02g01040.1	Cp4.1LG02g01040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000162	tryptophan biosynthetic process
biological_process	GO:0006568	tryptophan metabolic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0004834	tryptophan synthase activity