Cp4.1LG02g00500 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG02g00500
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Descriptionheterogeneous nuclear ribonucleoprotein 1-like
LocationCp4.1LG02: 5323013 .. 5326138 (+)
RNA-Seq ExpressionCp4.1LG02g00500
SyntenyCp4.1LG02g00500
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGACCGTTAAAATTCATTACCCTCTTTCAATTCGGAATTCCACTGAAAACCTAAATCAACGATCTTTCATCTTCTTCTCCACGTCTTATCGATCTTCTTCGACAACGCATCCGCCAGCCAAATTCCTCATGGCGTCCAAATCGAAGAGCGAAAATCCTCACACCGGCGATGGCGCTAGCCCCGGGTTTGTTTCTTTTCCTTTCTCAATTTTTTATTTTCTTTCGGTGTTTCTCTGAGAAAGTTTGATGAGTTGGGGAAAAGGGCTTTCTTAAGCGCCAGATTCCATTACTATATGTCATCCCCCTCTCAGGCCTGTCAAACAGTTAATTTGTCTTGATTTTCTTTAGATCTCGATTTTGTGTTCTCACTTTTTTGCTATTTTTGTTTTCCCAGGAAGATTTTCATCGGAGGATTGGCGAAGGATACAACTTACAGTGAGTTTTTGTTTTACTTTAATCATGTATTAGGGACGAGTTTCTGTACCCATGTTTAATTCTGCTGAAATTACCTGTTATTCTTGATGGGTGTTCATATTTTGAATGGCTAGCTTAGCACCTCTTCTATTGCGGTTCATTGATAATTAAATAAATTCTTGATTTGCTAATTCTGTATATTGATTAAGTGCAATGTTAGCTTAGATTCGGCTGCAGCTGATGTTCTTTTTCATTGTGTTCTTGGAAAAATTAGCTCAATTCAACAAGCATTTTGGTGATTATGGAGAGATAACGGACTCGGTGATCATGAAGGATCGGTATACCGGACAACCAAGAGGTTTTGGGTTTATTACTTATGCTGATCCTTCTGTGGTTGACAAGGTTATCGAAGATACACACGTCATCAATGGAAAACAGGTACGTCATCTTAATTGTTTTGTTTTTCTTCTTCCTGCTAACTGGCTTACACTCTTTTTCAATTAAATCAATTAAATTATCGGTAGTAGTAGCGTTAGCGTGCCAAGCCCTACAATGGATTCATAGATTATGAAATCAATTAGACTATGATTTAAATACTTTTTTCTGATTCTTTTGTTTATTTTTTATTCTTTTTTGAAAAAAAAAAACCACATTATATTCTACTGGGTTGTTGAATGGCGTAAAATATTTTTGTTTCCCGTGGTCTTATGAGGTTAATTATTAGTCTTTTTCTGTATTTTATTGGATGGTTTATAATCATACAGTTGTAATATGATTGTTGTTGCATGAATTTATGCTTTATTTATTTTATTTCTGGGATTTACTTTGCTAAATGGAGATAGGTTGAAATCAAGAGAACCATCCCTAAAGGGCAAGGTCAATCAAAGGATTTTAAGACGAAGAAGATATTTGTTGGTGGGATTCCATCAACGGTTACTGAAGGTAAGGTTATTGAGTTATATGTTGAAGCGTGTTCTTTATTGGCAGGACCAGTGTTTGTTTCAGCCACTTTTTATTTGATCTTCTCATATTGATGTAGTTTCTATGTTGTGTTTTAATATGTTTATTACGTTATCTTGCTTGTAGATGAGTTAAAACATTTCTTTTCCAAGTTTGGGAAAGTTGTGGAACACCAAATTATACGTGACCATGAAACCAACCGTTCGCGAGGCTTTGGGTTTATAGTTTTTGACGAGGAAGAAGTTGTAGATGAAATTTTATCCAAAGGAAATATGATAGATATGTCTGGTACCCAGGTGAGCTTATATAAATGGACCGCAAGTGAGCAAAGTGTAAACCAAATTGTGTTTCCCATGGGTTTTGCACCATCGTATTTTCCAGTTTTAATAATAATGGACAATTTTCAACCCTTTCACTTTATACAATCGTATCTTTTAAGTATTATGCGATTAGCTGCTTCTTTTTGCTACTAATTTTAGGTTGAGGTTATACAGGTATAGGTCTTCTAAGGCAAGGGCTATCAGAATAGTTAAATTGCAGAAGATCTAGGTTAACTAAGTTACTTTGTTGTAGGTGGAGATCAAGAAAGCTGAACCAAAGAAATCCTCAAACCCACCACCTGCTCCTGCATATGGTAGCAATTCTAGGGCTCGTTCATTCAATGATGGCTTTGGTGGATATGGTGGTTCTTATGGGGACTTTGATGCAGGCTTTGGACCTGGTCCCTTTAGGACTGCAGGTGGTCTTGGTGGTAGGATTGGGGGTGGCTATGGTTATGGTAGTGGTGGTGACTTTGGTGGTGGTTATGGAGGTTTTGGAAGCAGTAGCTTAGGTGGCTACCGAGGTGAATCATCCCTCGGTTATTCTAGTCGATTTGGTCCTTACAGTGGTGGGTTTGGTGGGGGTTATGGCACAAGTGGCTTAGGAGGATATGGTCGAGGGGTTGATGGCTATGGGAGCTATGGAGGTTCAGGTTACAGTGGAGGTTATGACTCAGGTCCTGGTGCTAGTTACGGAGGAGCAGGTGGTTTGTATGGAAGGGGAGGCTATAGTGGGAGTAGTCGATACCATCCCTATGCAAGGTAGAATCGTTGCGTAGTCAGTACCGTCCATCTCCTTGGAAGCTAGAACAGAAGTCTCACTCGAACGCTGTCTCGCCTAAGAATTGCCATAGAGTTTTTCAAACACACAGGTTCCTTTAGTTTTGTGGCCCAGTGATAGGCAGTGTTCTCTCACAAACACTAGAGGTCCAAGGATGCTTTGGAAAAAGACGAGAAAGAGTGTATTAGACTTTTTATTGTATGGTTTTAGACACTATTATGTAGACTACACTACTGCAAGCTAGTTTATGCCTAATATGGTTGTCCCCATCTAGTACAATTTCAATGTAGTGTGCTGTGCTGCTCTGCTGTAGGCTTTAGCATACACTTATTTCTCGGTTATGTTTATTCGCCACGTTAGTTCGATAAACTAGATAGAGATATTAGATGTATGTTATTTCCTAACACGACCTAGTAGTCTTATACTCTTTATTTTAGTTTACAGAACGTGATAGACACAGGAAGAGTAAAATATAATCCTCCCAGTTCTTACTGATAGTTTTAGGGGAGCGAGCGGGACATGTAGGACGAGTCCCATCATGTTTATCGATATGTTGTTTAGATAGATAGAGGATTGTTGTTTTGATATTGAGATTAATTCATTATGTTCTTGGCCTTTTGAGTGATCTGCTGAAGCTCTACTGGTGGTTGCC

mRNA sequence

GGACCGTTAAAATTCATTACCCTCTTTCAATTCGGAATTCCACTGAAAACCTAAATCAACGATCTTTCATCTTCTTCTCCACGTCTTATCGATCTTCTTCGACAACGCATCCGCCAGCCAAATTCCTCATGGCGTCCAAATCGAAGAGCGAAAATCCTCACACCGGCGATGGCGCTAGCCCCGGGAAGATTTTCATCGGAGGATTGGCGAAGGATACAACTTACACTCAATTCAACAAGCATTTTGGTGATTATGGAGAGATAACGGACTCGGTGATCATGAAGGATCGGTATACCGGACAACCAAGAGGTTTTGGGTTTATTACTTATGCTGATCCTTCTGTGGTTGACAAGGTTATCGAAGATACACACGTCATCAATGGAAAACAGGTTGAAATCAAGAGAACCATCCCTAAAGGGCAAGGTCAATCAAAGGATTTTAAGACGAAGAAGATATTTGTTGGTGGGATTCCATCAACGGTTACTGAAGATGAGTTAAAACATTTCTTTTCCAAGTTTGGGAAAGTTGTGGAACACCAAATTATACGTGACCATGAAACCAACCGTTCGCGAGGCTTTGGGTTTATAGTTTTTGACGAGGAAGAAGTTGTAGATGAAATTTTATCCAAAGGAAATATGATAGATATGTCTGGTACCCAGGTGGAGATCAAGAAAGCTGAACCAAAGAAATCCTCAAACCCACCACCTGCTCCTGCATATGGTAGCAATTCTAGGGCTCGTTCATTCAATGATGGCTTTGGTGGATATGGTGGTTCTTATGGGGACTTTGATGCAGGCTTTGGACCTGGTCCCTTTAGGACTGCAGGTGGTCTTGGTGGTAGGATTGGGGGTGGCTATGGTTATGGTAGTGGTGGTGACTTTGGTGGTGGTTATGGAGGTTTTGGAAGCAGTAGCTTAGGTGGCTACCGAGGTGAATCATCCCTCGGTTATTCTAGTCGATTTGGTCCTTACAGTGGTGGGTTTGGTGGGGGTTATGGCACAAGTGGCTTAGGAGGATATGGTCGAGGGGTTGATGGCTATGGGAGCTATGGAGGTTCAGGTTACAGTGGAGGTTATGACTCAGGTCCTGGTGCTAGTTACGGAGGAGCAGGTGGTTTGTATGGAAGGGGAGGCTATAGTGGGAGTAGTCGATACCATCCCTATGCAAGGTAGAATCGTTGCGTAGTCAGTACCGTCCATCTCCTTGGAAGCTAGAACAGAAGTCTCACTCGAACGCTGTCTCGCCTAAGAATTGCCATAGAGTTTTTCAAACACACAGGTTCCTTTAGTTTTGTGGCCCAGTGATAGGCAGTGTTCTCTCACAAACACTAGAGGTCCAAGGATGCTTTGGAAAAAGACGAGAAAGAGTGTATTAGACTTTTTATTGTATGGTTTTAGACACTATTATGTAGACTACACTACTGCAAGCTAGTTTATGCCTAATATGGTTGTCCCCATCTAGTACAATTTCAATGTAGTGTGCTGTGCTGCTCTGCTGTAGGCTTTAGCATACACTTATTTCTCGGTTATGTTTATTCGCCACGTTAGTTCGATAAACTAGATAGAGATATTAGATGTATGTTATTTCCTAACACGACCTAGTAGTCTTATACTCTTTATTTTAGTTTACAGAACGTGATAGACACAGGAAGAGTAAAATATAATCCTCCCAGTTCTTACTGATAGTTTTAGGGGAGCGAGCGGGACATGTAGGACGAGTCCCATCATGTTTATCGATATGTTGTTTAGATAGATAGAGGATTGTTGTTTTGATATTGAGATTAATTCATTATGTTCTTGGCCTTTTGAGTGATCTGCTGAAGCTCTACTGGTGGTTGCC

Coding sequence (CDS)

ATGGCGTCCAAATCGAAGAGCGAAAATCCTCACACCGGCGATGGCGCTAGCCCCGGGAAGATTTTCATCGGAGGATTGGCGAAGGATACAACTTACACTCAATTCAACAAGCATTTTGGTGATTATGGAGAGATAACGGACTCGGTGATCATGAAGGATCGGTATACCGGACAACCAAGAGGTTTTGGGTTTATTACTTATGCTGATCCTTCTGTGGTTGACAAGGTTATCGAAGATACACACGTCATCAATGGAAAACAGGTTGAAATCAAGAGAACCATCCCTAAAGGGCAAGGTCAATCAAAGGATTTTAAGACGAAGAAGATATTTGTTGGTGGGATTCCATCAACGGTTACTGAAGATGAGTTAAAACATTTCTTTTCCAAGTTTGGGAAAGTTGTGGAACACCAAATTATACGTGACCATGAAACCAACCGTTCGCGAGGCTTTGGGTTTATAGTTTTTGACGAGGAAGAAGTTGTAGATGAAATTTTATCCAAAGGAAATATGATAGATATGTCTGGTACCCAGGTGGAGATCAAGAAAGCTGAACCAAAGAAATCCTCAAACCCACCACCTGCTCCTGCATATGGTAGCAATTCTAGGGCTCGTTCATTCAATGATGGCTTTGGTGGATATGGTGGTTCTTATGGGGACTTTGATGCAGGCTTTGGACCTGGTCCCTTTAGGACTGCAGGTGGTCTTGGTGGTAGGATTGGGGGTGGCTATGGTTATGGTAGTGGTGGTGACTTTGGTGGTGGTTATGGAGGTTTTGGAAGCAGTAGCTTAGGTGGCTACCGAGGTGAATCATCCCTCGGTTATTCTAGTCGATTTGGTCCTTACAGTGGTGGGTTTGGTGGGGGTTATGGCACAAGTGGCTTAGGAGGATATGGTCGAGGGGTTGATGGCTATGGGAGCTATGGAGGTTCAGGTTACAGTGGAGGTTATGACTCAGGTCCTGGTGCTAGTTACGGAGGAGCAGGTGGTTTGTATGGAAGGGGAGGCTATAGTGGGAGTAGTCGATACCATCCCTATGCAAGGTAG

Protein sequence

MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTEDELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEIKKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLGGRIGGGYGYGSGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRGVDGYGSYGGSGYSGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR
Homology
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BLAST of Cp4.1LG02g00500 vs. ExPASy Swiss-Prot
Match: Q8W034 (Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP1 PE=1 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 3.7e-39
Identity = 135/396 (34.09%), Postives = 202/396 (51.01%), Query Frame = 0 

Query: 19  GKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIE 78
           GK+F+GG++ +T   +  +HF +YGE++ +++M+D+ TG+PRGFGF+ ++DPSV+D+V++
Sbjct: 6   GKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRVLQ 65

Query: 79  DTHVINGKQVEIKRTI----------------PKGQGQSKDFKTKKIFVGGIPSTVTEDE 138
           + H I+ ++V++KR +                 +  G     KTKKIFVGG+P T+T++E
Sbjct: 66  EKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPTLTDEE 125

Query: 139 LKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEIKK 198
            + +F  +G V +  I+ D  TNR RGFGF+ FD E+ VD +L K    D+SG QVE+K+
Sbjct: 126 FRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHK-TFHDLSGKQVEVKR 185

Query: 199 AEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLG------ 258
           A PK ++     P  G  S     + G+ GYGG+   +D       F     +G      
Sbjct: 186 ALPKDAN-----PGGGGRSMGGGGSGGYQGYGGNESSYDGRMDSNRFLQHQSVGNGLPSY 245

Query: 259 GRIGGGYGYGSGGDFGGGYGGFG--SSSLGGYRGESSLGYSSR------FG--------- 318
           G  G G GYG+G + G GYG +G  + S GGY   ++ GY +       +G         
Sbjct: 246 GSSGYGAGYGNGSN-GAGYGAYGGYTGSAGGYGAGATAGYGATNIPGAGYGSSTGVAPRN 305

Query: 319 ----PYSGGFGG-GYGTS--------------------------GLGGYGRGVDGYGSYG 345
               P S G+G  GYG+                           G GGY     GYG+  
Sbjct: 306 SWDTPASSGYGNPGYGSGAAHSGYGVPGAAPPTQSPSGYSNQGYGYGGYSGSDSGYGNQA 365

[Close]
BLAST of Cp4.1LG02g00500 vs. ExPASy Swiss-Prot
Match: P21522 (Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog OS=Schistocerca americana OX=7009 GN=HNRNP PE=2 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 5.2e-33
Identity = 142/351 (40.46%), Postives = 187/351 (53.28%), Query Frame = 0 

Query: 8   ENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPRGFGFITY 67
           EN H G+     K+FIGGL   TT     +HF  +GEI D V+MKD  T + RGFGFITY
Sbjct: 7   ENDH-GEPEHVRKLFIGGLDYRTTDESLKQHFEQWGEIVDVVVMKDPKTKRSRGFGFITY 66

Query: 68  ADPSVVDKVIE-DTHVINGKQVEIKRTIPKGQ-GQSKDFKT-KKIFVGGIPSTVTEDELK 127
           +   +VD       H ++G+ VE KR +P+ + G+ +   T KK+FVGGI   + E++L+
Sbjct: 67  SRAHMVDDAQNARPHKVDGRVVEPKRAVPRTEIGRPEAGATVKKLFVGGIKEEMEENDLR 126

Query: 128 HFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEI-LSKGNMIDMSGTQVEIKKA 187
            +F ++G VV   I+ D ET + RGF F+ FD+ + VD+I LS+ + I   G  +++KKA
Sbjct: 127 DYFKQYGTVVSAAIVVDKETRKKRGFAFVEFDDYDPVDKICLSRNHQI--RGKHIDVKKA 186

Query: 188 EPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPG---------PFRTA-- 247
            PK  +        G   R        GG+GG  GD+    G G         P+     
Sbjct: 187 LPKGDA----PGGRGGGGRGGVGGGAGGGWGGGRGDWGGSAGGGGGGGWGGADPWENGRG 246

Query: 248 ------GGLGGRIGGGYGYGSGGDFGGG--YGGFGSSSLGGYRGESSLGYSSRFGPYSGG 307
                 GG GG +GGG  +G GG  GGG  YGG G  S GG+   S+ GY+S  GP S G
Sbjct: 247 GGGDRWGGGGGGMGGGDRWGGGGGMGGGDRYGGGGGRS-GGW---SNDGYNS--GPQSDG 306

Query: 308 FGGGYGTSGLGGYGRGVDGYGSYGGSGYSGGYDSGPGASYGGAGGLYGRGG 336
           FGGGY  S  GG  RG  GYG    + YS   D G   S GG GG YG GG
Sbjct: 307 FGGGYKQSYGGGAVRGSSGYGGSRSAPYS---DRG---SRGGGGGGYGSGG 338

[Close]
BLAST of Cp4.1LG02g00500 vs. ExPASy Swiss-Prot
Match: Q8BG05 (Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=1 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 4.9e-31
Identity = 125/334 (37.43%), Postives = 172/334 (51.50%), Query Frame = 0 

Query: 20  KIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVI-E 79
           K+FIGGL+ +TT     +HF  +G +TD V+M+D  T + RGFGF+TY+    VD  +  
Sbjct: 36  KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95

Query: 80  DTHVINGKQVEIKRTIPKGQG--QSKDFKTKKIFVGGIPSTVTEDELKHFFSKFGKVVEH 139
             H ++G+ VE KR + +            KKIFVGGI     E  L+ +F K+GK+   
Sbjct: 96  RPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETI 155

Query: 140 QIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEIKKAEPKKSSNPPPAPA 199
           +++ D ++ + RGF F+ FD+ + VD+I+ +     ++G   E+KKA  K+        +
Sbjct: 156 EVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQ-KYHTINGHNCEVKKALSKQEMQ-----S 215

Query: 200 YGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLGGRIGGGYG-YGSGGDFG--G 259
            GS            G GG  G+F             G GG  GGG G +G GG+FG  G
Sbjct: 216 AGSQR----------GRGGGSGNF------------MGRGGNFGGGGGNFGRGGNFGGRG 275

Query: 260 GYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRGVDGYGSYGGSGYS 319
           GYGG G  S G Y G    GY+  FG   G +GGG G S  GGYG G  GYG+ GG GY 
Sbjct: 276 GYGGGGGGSRGSYGGGDG-GYNG-FGGDGGNYGGGPGYSSRGGYGGGGPGYGNQGG-GYG 333

Query: 320 GGYDSGPGASYGG--AGGLYGRGGYSGSSRYHPY 346
           GG     G  Y G   GG +G G Y G   Y+ +
Sbjct: 336 GG-----GGGYDGYNEGGNFGGGNYGGGGNYNDF 333

[Close]
BLAST of Cp4.1LG02g00500 vs. ExPASy Swiss-Prot
Match: Q6URK4 (Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 4.9e-31
Identity = 125/334 (37.43%), Postives = 172/334 (51.50%), Query Frame = 0 

Query: 20  KIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVI-E 79
           K+FIGGL+ +TT     +HF  +G +TD V+M+D  T + RGFGF+TY+    VD  +  
Sbjct: 36  KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95

Query: 80  DTHVINGKQVEIKRTIPKGQG--QSKDFKTKKIFVGGIPSTVTEDELKHFFSKFGKVVEH 139
             H ++G+ VE KR + +            KKIFVGGI     E  L+ +F K+GK+   
Sbjct: 96  RPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETI 155

Query: 140 QIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEIKKAEPKKSSNPPPAPA 199
           +++ D ++ + RGF F+ FD+ + VD+I+ +     ++G   E+KKA  K+        +
Sbjct: 156 EVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQ-KYHTINGHNCEVKKALSKQEMQ-----S 215

Query: 200 YGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLGGRIGGGYG-YGSGGDFG--G 259
            GS            G GG  G+F             G GG  GGG G +G GG+FG  G
Sbjct: 216 AGSQR----------GRGGGSGNF------------MGRGGNFGGGGGNFGRGGNFGGRG 275

Query: 260 GYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRGVDGYGSYGGSGYS 319
           GYGG G  S G Y G    GY+  FG   G +GGG G S  GGYG G  GYG+ GG GY 
Sbjct: 276 GYGGGGGGSRGSYGGGDG-GYNG-FGGDGGNYGGGPGYSSRGGYGGGGPGYGNQGG-GYG 333

Query: 320 GGYDSGPGASYGG--AGGLYGRGGYSGSSRYHPY 346
           GG     G  Y G   GG +G G Y G   Y+ +
Sbjct: 336 GG-----GGGYDGYNEGGNFGGGNYGGGGNYNDF 333

[Close]
BLAST of Cp4.1LG02g00500 vs. ExPASy Swiss-Prot
Match: P51991 (Heterogeneous nuclear ribonucleoprotein A3 OS=Homo sapiens OX=9606 GN=HNRNPA3 PE=1 SV=2)

HSP 1 Score: 136.0 bits (341), Expect = 8.3e-31
Identity = 128/340 (37.65%), Postives = 174/340 (51.18%), Query Frame = 0 

Query: 20  KIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVI-E 79
           K+FIGGL+ +TT     +HF  +G +TD V+M+D  T + RGFGF+TY+    VD  +  
Sbjct: 36  KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95

Query: 80  DTHVINGKQVEIKRTIPKGQG--QSKDFKTKKIFVGGIPSTVTEDELKHFFSKFGKVVEH 139
             H ++G+ VE KR + +            KKIFVGGI     E  L+ +F K+GK+   
Sbjct: 96  RPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETI 155

Query: 140 QIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEIKKAEPKKSSNPPPAPA 199
           +++ D ++ + RGF F+ FD+ + VD+I+ +     ++G   E+KKA  K+        +
Sbjct: 156 EVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQ-KYHTINGHNCEVKKALSKQEMQ-----S 215

Query: 200 YGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLGGRIGGGYG-YGSGGDFG--G 259
            GS            G GG  G+F             G GG  GGG G +G GG+FG  G
Sbjct: 216 AGSQR----------GRGGGSGNF------------MGRGGNFGGGGGNFGRGGNFGGRG 275

Query: 260 GYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRGVDGYGS----YGG 319
           GYGG G  S G Y G    GY+  FG   G +GGG G S  GGYG G  GYG+    YGG
Sbjct: 276 GYGGGGGGSRGSYGGGDG-GYNG-FGGDGGNYGGGPGYSSRGGYGGGGPGYGNQGGGYGG 335

Query: 320 SGYSGGYDSG---PGASYGGAGGLYGRGGYSG--SSRYHP 345
            G   GY+ G    G +YGG G     G YSG   S Y P
Sbjct: 336 GGGYDGYNEGGNFGGGNYGGGGNYNDFGNYSGQQQSNYGP 345

[Close]
BLAST of Cp4.1LG02g00500 vs. NCBI nr
Match: XP_023525200.1 (heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 665 bits (1716), Expect = 1.45e-240
Identity = 347/347 (100.00%), Postives = 347/347 (100.00%), Query Frame = 0 

Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR 60
           MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR
Sbjct: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120
           GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE
Sbjct: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120

Query: 121 DELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEI 180
           DELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEI
Sbjct: 121 DELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEI 180

Query: 181 KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLGGRIG 240
           KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLGGRIG
Sbjct: 181 KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLGGRIG 240

Query: 241 GGYGYGSGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300
           GGYGYGSGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG
Sbjct: 241 GGYGYGSGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300

Query: 301 VDGYGSYGGSGYSGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347
           VDGYGSYGGSGYSGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR
Sbjct: 301 VDGYGSYGGSGYSGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347

[Close]
BLAST of Cp4.1LG02g00500 vs. NCBI nr
Match: XP_022941092.1 (heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita moschata] >XP_022981531.1 heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita maxima] >KAG6607739.1 Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 664 bits (1712), Expect = 5.90e-240
Identity = 346/347 (99.71%), Postives = 346/347 (99.71%), Query Frame = 0 

Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR 60
           MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR
Sbjct: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120
           GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE
Sbjct: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120

Query: 121 DELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEI 180
           DELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEI
Sbjct: 121 DELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEI 180

Query: 181 KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLGGRIG 240
           KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLGGRIG
Sbjct: 181 KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLGGRIG 240

Query: 241 GGYGYGSGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300
           GGYGYGSGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG
Sbjct: 241 GGYGYGSGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300

Query: 301 VDGYGSYGGSGYSGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347
           VDGYGSYGGSGY GGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR
Sbjct: 301 VDGYGSYGGSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347

[Close]
BLAST of Cp4.1LG02g00500 vs. NCBI nr
Match: KAG7037314.1 (Heterogeneous nuclear ribonucleoprotein 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 657 bits (1696), Expect = 1.95e-237
Identity = 346/352 (98.30%), Postives = 346/352 (98.30%), Query Frame = 0 

Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR 60
           MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR
Sbjct: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120
           GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE
Sbjct: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120

Query: 121 DELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVE- 180
           DELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVE 
Sbjct: 121 DELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEV 180

Query: 181 ----IKKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGL 240
               IKKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGL
Sbjct: 181 IQVEIKKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGL 240

Query: 241 GGRIGGGYGYGSGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLG 300
           GGRIGGGYGYGSGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLG
Sbjct: 241 GGRIGGGYGYGSGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLG 300

Query: 301 GYGRGVDGYGSYGGSGYSGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347
           GYGRGVDGYGSYGGSGY GGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR
Sbjct: 301 GYGRGVDGYGSYGGSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 352

[Close]
BLAST of Cp4.1LG02g00500 vs. NCBI nr
Match: XP_008463022.1 (PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Cucumis melo] >KAA0048257.1 heterogeneous nuclear ribonucleoprotein 1 [Cucumis melo var. makuwa] >TYK08000.1 heterogeneous nuclear ribonucleoprotein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 640 bits (1651), Expect = 1.17e-230
Identity = 332/347 (95.68%), Postives = 339/347 (97.69%), Query Frame = 0 

Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR 60
           MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFG+YGEITDSVIMKDRYTGQPR
Sbjct: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120
           GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE
Sbjct: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120

Query: 121 DELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEI 180
           DE KHFFSK+GK+VEHQIIRDHETNRSRGFGFIVF+EEEVVDEILSKGNMIDMSGTQVEI
Sbjct: 121 DEFKHFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI 180

Query: 181 KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLGGRIG 240
           KKAEPKKSSNP PAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFR  GG+GGRIG
Sbjct: 181 KKAEPKKSSNPLPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRNPGGIGGRIG 240

Query: 241 GGYGYGSGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300
            GYGYGSGGDFGGGYGGFG +SLGGYRG+SSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG
Sbjct: 241 SGYGYGSGGDFGGGYGGFGGNSLGGYRGDSSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300

Query: 301 VDGYGSYGGSGYSGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347
           VDGYGSYG SGY GGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR
Sbjct: 301 VDGYGSYGSSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347

[Close]
BLAST of Cp4.1LG02g00500 vs. NCBI nr
Match: XP_004149406.1 (heterogeneous nuclear ribonucleoprotein 1 [Cucumis sativus] >KGN44390.1 hypothetical protein Csa_015841 [Cucumis sativus])

HSP 1 Score: 639 bits (1648), Expect = 3.35e-230
Identity = 331/347 (95.39%), Postives = 339/347 (97.69%), Query Frame = 0 

Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR 60
           MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFG+YGEITDSVIMKDRYTGQPR
Sbjct: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120
           GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE
Sbjct: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120

Query: 121 DELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEI 180
           DE KHFFSK+GK+VEHQIIRDHETNRSRGFGFIVF+EEEVVDEILSKGNMIDMSGTQVEI
Sbjct: 121 DEFKHFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI 180

Query: 181 KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLGGRIG 240
           KKAEPKKSSNP PAPAYGSNSRAR+FNDGFGGYGGSYGDFDAGFGPGPFR  GG+GGRIG
Sbjct: 181 KKAEPKKSSNPLPAPAYGSNSRARTFNDGFGGYGGSYGDFDAGFGPGPFRNPGGIGGRIG 240

Query: 241 GGYGYGSGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300
            GYGYGSGGDFGGGYGGFG +SLGGYRG+SSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG
Sbjct: 241 SGYGYGSGGDFGGGYGGFGGNSLGGYRGDSSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300

Query: 301 VDGYGSYGGSGYSGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347
           VDGYGSYG SGY GGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR
Sbjct: 301 VDGYGSYGSSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347

[Close]
BLAST of Cp4.1LG02g00500 vs. ExPASy TrEMBL
Match: A0A6J1IWT7 (heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111480620 PE=4 SV=1)

HSP 1 Score: 664 bits (1712), Expect = 2.86e-240
Identity = 346/347 (99.71%), Postives = 346/347 (99.71%), Query Frame = 0 

Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR 60
           MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR
Sbjct: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120
           GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE
Sbjct: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120

Query: 121 DELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEI 180
           DELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEI
Sbjct: 121 DELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEI 180

Query: 181 KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLGGRIG 240
           KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLGGRIG
Sbjct: 181 KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLGGRIG 240

Query: 241 GGYGYGSGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300
           GGYGYGSGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG
Sbjct: 241 GGYGYGSGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300

Query: 301 VDGYGSYGGSGYSGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347
           VDGYGSYGGSGY GGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR
Sbjct: 301 VDGYGSYGGSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347

[Close]
BLAST of Cp4.1LG02g00500 vs. ExPASy TrEMBL
Match: A0A6J1FLG0 (heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111446490 PE=4 SV=1)

HSP 1 Score: 664 bits (1712), Expect = 2.86e-240
Identity = 346/347 (99.71%), Postives = 346/347 (99.71%), Query Frame = 0 

Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR 60
           MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR
Sbjct: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120
           GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE
Sbjct: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120

Query: 121 DELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEI 180
           DELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEI
Sbjct: 121 DELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEI 180

Query: 181 KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLGGRIG 240
           KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLGGRIG
Sbjct: 181 KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLGGRIG 240

Query: 241 GGYGYGSGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300
           GGYGYGSGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG
Sbjct: 241 GGYGYGSGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300

Query: 301 VDGYGSYGGSGYSGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347
           VDGYGSYGGSGY GGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR
Sbjct: 301 VDGYGSYGGSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347

[Close]
BLAST of Cp4.1LG02g00500 vs. ExPASy TrEMBL
Match: A0A5A7U1Z1 (Heterogeneous nuclear ribonucleoprotein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G001410 PE=4 SV=1)

HSP 1 Score: 640 bits (1651), Expect = 5.66e-231
Identity = 332/347 (95.68%), Postives = 339/347 (97.69%), Query Frame = 0 

Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR 60
           MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFG+YGEITDSVIMKDRYTGQPR
Sbjct: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120
           GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE
Sbjct: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120

Query: 121 DELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEI 180
           DE KHFFSK+GK+VEHQIIRDHETNRSRGFGFIVF+EEEVVDEILSKGNMIDMSGTQVEI
Sbjct: 121 DEFKHFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI 180

Query: 181 KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLGGRIG 240
           KKAEPKKSSNP PAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFR  GG+GGRIG
Sbjct: 181 KKAEPKKSSNPLPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRNPGGIGGRIG 240

Query: 241 GGYGYGSGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300
            GYGYGSGGDFGGGYGGFG +SLGGYRG+SSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG
Sbjct: 241 SGYGYGSGGDFGGGYGGFGGNSLGGYRGDSSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300

Query: 301 VDGYGSYGGSGYSGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347
           VDGYGSYG SGY GGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR
Sbjct: 301 VDGYGSYGSSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347

[Close]
BLAST of Cp4.1LG02g00500 vs. ExPASy TrEMBL
Match: A0A1S3CI79 (heterogeneous nuclear ribonucleoprotein 1 OS=Cucumis melo OX=3656 GN=LOC103501266 PE=4 SV=1)

HSP 1 Score: 640 bits (1651), Expect = 5.66e-231
Identity = 332/347 (95.68%), Postives = 339/347 (97.69%), Query Frame = 0 

Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR 60
           MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFG+YGEITDSVIMKDRYTGQPR
Sbjct: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120
           GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE
Sbjct: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120

Query: 121 DELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEI 180
           DE KHFFSK+GK+VEHQIIRDHETNRSRGFGFIVF+EEEVVDEILSKGNMIDMSGTQVEI
Sbjct: 121 DEFKHFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI 180

Query: 181 KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLGGRIG 240
           KKAEPKKSSNP PAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFR  GG+GGRIG
Sbjct: 181 KKAEPKKSSNPLPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRNPGGIGGRIG 240

Query: 241 GGYGYGSGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300
            GYGYGSGGDFGGGYGGFG +SLGGYRG+SSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG
Sbjct: 241 SGYGYGSGGDFGGGYGGFGGNSLGGYRGDSSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300

Query: 301 VDGYGSYGGSGYSGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347
           VDGYGSYG SGY GGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR
Sbjct: 301 VDGYGSYGSSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347

[Close]
BLAST of Cp4.1LG02g00500 vs. ExPASy TrEMBL
Match: A0A0A0K3W8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G278740 PE=4 SV=1)

HSP 1 Score: 639 bits (1648), Expect = 1.62e-230
Identity = 331/347 (95.39%), Postives = 339/347 (97.69%), Query Frame = 0 

Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR 60
           MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFG+YGEITDSVIMKDRYTGQPR
Sbjct: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120
           GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE
Sbjct: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120

Query: 121 DELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEI 180
           DE KHFFSK+GK+VEHQIIRDHETNRSRGFGFIVF+EEEVVDEILSKGNMIDMSGTQVEI
Sbjct: 121 DEFKHFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI 180

Query: 181 KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLGGRIG 240
           KKAEPKKSSNP PAPAYGSNSRAR+FNDGFGGYGGSYGDFDAGFGPGPFR  GG+GGRIG
Sbjct: 181 KKAEPKKSSNPLPAPAYGSNSRARTFNDGFGGYGGSYGDFDAGFGPGPFRNPGGIGGRIG 240

Query: 241 GGYGYGSGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300
            GYGYGSGGDFGGGYGGFG +SLGGYRG+SSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG
Sbjct: 241 SGYGYGSGGDFGGGYGGFGGNSLGGYRGDSSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300

Query: 301 VDGYGSYGGSGYSGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347
           VDGYGSYG SGY GGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR
Sbjct: 301 VDGYGSYGSSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347

[Close]
BLAST of Cp4.1LG02g00500 vs. TAIR 10
Match: AT3G13224.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 458.0 bits (1177), Expect = 6.8e-129
Identity = 265/360 (73.61%), Postives = 289/360 (80.28%), Query Frame = 0 

Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR 60
           M S+S+++N  +GDGASPGKIFIGGL KDTT T FNKHFG YGEITDSVIM+DR+TGQPR
Sbjct: 1   MGSRSRNDNFQSGDGASPGKIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQG--QSKDFKTKKIFVGGIPSTV 120
           GFGFIT+ADPSVVDKVIEDTHVINGKQVEIKRTIPKG G  QSKD KTKKIFVGGIPSTV
Sbjct: 61  GFGFITFADPSVVDKVIEDTHVINGKQVEIKRTIPKGAGGNQSKDIKTKKIFVGGIPSTV 120

Query: 121 TEDELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQV 180
           TEDELK FF+K+G VVEHQ+IRDHETNRSRGFGF++FD EEVVDE+LSKGNMIDM+ TQV
Sbjct: 121 TEDELKDFFAKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLSKGNMIDMADTQV 180

Query: 181 EIKKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFG--PGPFRTAGGLG 240
           EIKKAEPKKS N  P P+YGS+ R RS ND +  YGG YG FD G+G  PGP R+ GG  
Sbjct: 181 EIKKAEPKKSLNRSP-PSYGSHPRGRSSNDSYASYGGPYGGFDGGYGHPPGPIRSHGGPA 240

Query: 241 GRIGGGYGYGSGG---DFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGG-GYGTS 300
            R  GGYGYG G    +FGGGY  +G  SLGGYR E  LGYSSRFGPY  GFGG GYG  
Sbjct: 241 SRYAGGYGYGRGSVGPEFGGGYNNYGGGSLGGYRNEPPLGYSSRFGPYGSGFGGEGYGRG 300

Query: 301 GLG---GYGR-GVDGYGSYGGSGYSGGYDS-GPGASYGGAGGLYGRGGYSGSSRYHPYAR 348
           G G   GY R G +GYG YGG GY G Y+S GPG SY GAGG YGR GYS SSRYHPYAR
Sbjct: 301 GEGAYLGYPRGGGEGYGGYGGPGYGGAYESGGPGGSYEGAGGPYGR-GYSSSSRYHPYAR 358

[Close]
BLAST of Cp4.1LG02g00500 vs. TAIR 10
Match: AT5G40490.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 322.4 bits (825), Expect = 4.5e-88
Identity = 213/396 (53.79%), Postives = 260/396 (65.66%), Query Frame = 0 

Query: 10  PHTGDGA-SPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPRGFGFITYA 69
           PH+G G  S GKIF+GGLA++TT  +F KHFG YGEITDSVIMKDR TGQPRGFGF+TYA
Sbjct: 32  PHSGGGVDSAGKIFVGGLARETTSAEFLKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYA 91

Query: 70  DPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTEDELKHFFS 129
           D SVVDKVI+D H+I GKQVEIKRTIP+G   S DFKTKKIFVGGIPS+V +DE K FF 
Sbjct: 92  DSSVVDKVIQDNHIIIGKQVEIKRTIPRGSMSSNDFKTKKIFVGGIPSSVDDDEFKEFFM 151

Query: 130 KFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEIKKAEPKK- 189
           +FG++ EHQI+RDH T RSRGFGF+ ++ E++VD +L+KGN I++SGTQVEIKKAEPKK 
Sbjct: 152 QFGELKEHQIMRDHSTGRSRGFGFVTYESEDMVDHLLAKGNRIELSGTQVEIKKAEPKKP 211

Query: 190 SSNPPPAPAYGSNSRARSFNDGFG-GYGGSYGDFDAGFGPGPFRTAGGLGGRIGGGYGYG 249
           +S   P+  +G +SR+ +F  G+G GYGG +G    G G GP+++ GG GG   GGYG G
Sbjct: 212 NSVTTPSKRFG-DSRS-NFGGGYGDGYGGGHGGGYGGPG-GPYKSGGGYGGGRSGGYG-G 271

Query: 250 SGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGG---------------------- 309
            GG+FGG  GG     +G YRGE +LGYS R+G   GG                      
Sbjct: 272 YGGEFGGYGGGGYGGGVGPYRGEPALGYSGRYGGGGGGYNRGGYSMGGGGGYGGGPGDMY 331

Query: 310 -----------------FGGGYGTSGLGGYGRGVDGYGSYG------------GSGYSGG 348
                            +GGGYG+SG+GGYG G+ G G  G            G G +GG
Sbjct: 332 GGSYGEPGGGYGGPSGSYGGGYGSSGIGGYGGGMGGAGGGGYRGGGGYDMGGVGGGGAGG 391

[Close]
BLAST of Cp4.1LG02g00500 vs. TAIR 10
Match: AT3G13224.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 310.1 bits (793), Expect = 2.3e-84
Identity = 151/184 (82.07%), Postives = 167/184 (90.76%), Query Frame = 0 

Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR 60
           M S+S+++N  +GDGASPGKIFIGGL KDTT T FNKHFG YGEITDSVIM+DR+TGQPR
Sbjct: 1   MGSRSRNDNFQSGDGASPGKIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQG--QSKDFKTKKIFVGGIPSTV 120
           GFGFIT+ADPSVVDKVIEDTHVINGKQVEIKRTIPKG G  QSKD KTKKIFVGGIPSTV
Sbjct: 61  GFGFITFADPSVVDKVIEDTHVINGKQVEIKRTIPKGAGGNQSKDIKTKKIFVGGIPSTV 120

Query: 121 TEDELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQV 180
           TEDELK FF+K+G VVEHQ+IRDHETNRSRGFGF++FD EEVVDE+LSKGNMIDM+ TQV
Sbjct: 121 TEDELKDFFAKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLSKGNMIDMADTQV 180

Query: 181 EIKK 183
            + K
Sbjct: 181 SLYK 184

[Close]
BLAST of Cp4.1LG02g00500 vs. TAIR 10
Match: AT1G17640.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 194.9 bits (494), Expect = 1.1e-49
Identity = 138/343 (40.23%), Postives = 193/343 (56.27%), Query Frame = 0 

Query: 16  ASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDK 75
           +SPGK+F+GG++ +TT   F  +FG +GE+ DSVIM DR TG PRGFGF+T+AD +V +K
Sbjct: 63  SSPGKLFVGGVSWETTAETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEK 122

Query: 76  VIEDTHVINGKQVEIKRTIPKGQGQS---KDFKTKKIFVGGIPSTVTEDELKHFFSKFGK 135
           V+E+ HVI+ ++V++KRT+P+G   +      KT+KIFVGG+P  + EDELK++F  +G 
Sbjct: 123 VLEEDHVIDDRKVDLKRTLPRGDKDTDIKAVSKTRKIFVGGLPPLLEEDELKNYFCVYGD 182

Query: 136 VVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEIKKAEPKKSSNPP 195
           ++EHQI+ DH T RSRGFGF+ F  E+ VD + S G + ++   QVEIK+AEPK++    
Sbjct: 183 IIEHQIMYDHHTGRSRGFGFVTFQTEDSVDRLFSDGKVHELGDKQVEIKRAEPKRTGR-- 242

Query: 196 PAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLGGRIGGGYGYGSGGDFG 255
                         ++ F  YG S          G +       G+    Y   SG    
Sbjct: 243 --------------DNSFRSYGAS----------GKYDQEDSYSGKANEDYSMYSG---Y 302

Query: 256 GGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTS--------GLGGYGRGVDGY 315
           GGYGG+G+     Y G S +  +  +G Y GG+G GYG          G GGY     GY
Sbjct: 303 GGYGGYGA-----YAGNSMVNPAGFYG-YGGGYGYGYGYGGQMFNMGYGAGGYSHMGSGY 362

Query: 316 GSYGGSGYSGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 348
           G    + Y GG   G G +   +G   G  G SG  RYHPY +
Sbjct: 363 GVAAAAAYGGGKSHGNGNNGSSSGKGNGTNG-SGPDRYHPYQK 369

[Close]
BLAST of Cp4.1LG02g00500 vs. TAIR 10
Match: AT4G14300.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 163.7 bits (413), Expect = 2.7e-40
Identity = 135/396 (34.09%), Postives = 202/396 (51.01%), Query Frame = 0 

Query: 19  GKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIE 78
           GK+F+GG++ +T   +  +HF +YGE++ +++M+D+ TG+PRGFGF+ ++DPSV+D+V++
Sbjct: 6   GKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRVLQ 65

Query: 79  DTHVINGKQVEIKRTI----------------PKGQGQSKDFKTKKIFVGGIPSTVTEDE 138
           + H I+ ++V++KR +                 +  G     KTKKIFVGG+P T+T++E
Sbjct: 66  EKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPTLTDEE 125

Query: 139 LKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEIKK 198
            + +F  +G V +  I+ D  TNR RGFGF+ FD E+ VD +L K    D+SG QVE+K+
Sbjct: 126 FRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHK-TFHDLSGKQVEVKR 185

Query: 199 AEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLG------ 258
           A PK ++     P  G  S     + G+ GYGG+   +D       F     +G      
Sbjct: 186 ALPKDAN-----PGGGGRSMGGGGSGGYQGYGGNESSYDGRMDSNRFLQHQSVGNGLPSY 245

Query: 259 GRIGGGYGYGSGGDFGGGYGGFG--SSSLGGYRGESSLGYSSR------FG--------- 318
           G  G G GYG+G + G GYG +G  + S GGY   ++ GY +       +G         
Sbjct: 246 GSSGYGAGYGNGSN-GAGYGAYGGYTGSAGGYGAGATAGYGATNIPGAGYGSSTGVAPRN 305

Query: 319 ----PYSGGFGG-GYGTS--------------------------GLGGYGRGVDGYGSYG 345
               P S G+G  GYG+                           G GGY     GYG+  
Sbjct: 306 SWDTPASSGYGNPGYGSGAAHSGYGVPGAAPPTQSPSGYSNQGYGYGGYSGSDSGYGNQA 365

The following BLAST results are available for this feature:
BLAST of Cp4.1LG02g00500 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8W0343.7e-3934.09Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP... [more]
P215225.2e-3340.46Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog OS=Schistocerca americ... [more]
Q8BG054.9e-3137.43Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus OX=10090 GN=Hnrnpa3 P... [more]
Q6URK44.9e-3137.43Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrn... [more]
P519918.3e-3137.65Heterogeneous nuclear ribonucleoprotein A3 OS=Homo sapiens OX=9606 GN=HNRNPA3 PE... [more]
BLAST of Cp4.1LG02g00500 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023525200.11.45e-240100.00heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita pepo subsp. pepo][more]
XP_022941092.15.90e-24099.71heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita moschata] >XP_02298153... [more]
KAG7037314.11.95e-23798.30Heterogeneous nuclear ribonucleoprotein 1 [Cucurbita argyrosperma subsp. argyros... [more]
XP_008463022.11.17e-23095.68PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Cucumis melo] >KAA0048257.... [more]
XP_004149406.13.35e-23095.39heterogeneous nuclear ribonucleoprotein 1 [Cucumis sativus] >KGN44390.1 hypothet... [more]
BLAST of Cp4.1LG02g00500 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1IWT72.86e-24099.71heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita maxima OX=3661 GN=LO... [more]
A0A6J1FLG02.86e-24099.71heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita moschata OX=3662 GN=... [more]
A0A5A7U1Z15.66e-23195.68Heterogeneous nuclear ribonucleoprotein 1 OS=Cucumis melo var. makuwa OX=1194695... [more]
A0A1S3CI795.66e-23195.68heterogeneous nuclear ribonucleoprotein 1 OS=Cucumis melo OX=3656 GN=LOC10350126... [more]
A0A0A0K3W81.62e-23095.39Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G278740 PE=4 SV=1[more]
BLAST of Cp4.1LG02g00500 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G13224.26.8e-12973.61RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT5G40490.14.5e-8853.79RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT3G13224.12.3e-8482.07RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT1G17640.11.1e-4940.23RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT4G14300.12.7e-4034.09RNA-binding (RRM/RBD/RNP motifs) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 20..91
e-value: 1.1E-19
score: 81.4
coord: 108..181
e-value: 7.2E-21
score: 85.3
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 21..88
e-value: 3.4E-14
score: 52.4
coord: 109..175
e-value: 1.3E-17
score: 63.4
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 107..185
score: 18.853777
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 19..95
score: 15.32331
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 98..219
e-value: 1.3E-25
score: 91.9
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 19..97
e-value: 3.2E-23
score: 83.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 179..201
NoneNo IPR availablePANTHERPTHR48033RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEINcoord: 1..347
NoneNo IPR availablePANTHERPTHR48033:SF6RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEINcoord: 1..347
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 15..100
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 104..215

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG02g00500.1Cp4.1LG02g00500.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010468 regulation of gene expression
cellular_component GO:0005654 nucleoplasm
molecular_function GO:0003723 RNA binding
molecular_function GO:0003676 nucleic acid binding