Cp4.1LG01g25920 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g25920
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	zinc finger CCCH domain-containing protein 14-like
Location	Cp4.1LG01: 21023359 .. 21024336 (-)
RNA-Seq Expression	Cp4.1LG01g25920
Synteny	Cp4.1LG01g25920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGCCCGCCATTGCCCTCCACTCTTTCTTCAACCGCCGAAGCCTCTCCAAACTCGCCCCAACCGGAGAATCTCTGCAGCCTGCATTTCGTTTCAATGTACCACTCCATTTTCCCTCCATTGTTATCATCATCCTCTCTTTCATTCACGCCCTCCTCCTCCTCCTCCTCCTCCTCCGCTGACGACGACTTCAACAACCCCTGCACCGCCGCTCCCACTTCCACGACCGACGATCTCCTTTTCCAGGCCCGGCTTATATTGGAGCACCGTGAGCTTTGTCAACGCCATGATCTCTGCCTCCGCCGCCTCCGTCAAGTCACCGACGATGTAGATTGTCTTCGACGGGAGAATGCGCAGCTCCAATTGGCCAACGCCGAGCTCATTAAGATTCTTTCGTCGAAGACGGCGGTTGATGATCTCGTTGCGATTCCGAATTCCCATCTCCGATCTCTGATTGGAGAAGGGCAAAACGGGGAGGAAGTTGGTTATGAAATTATAAGTCCGACGAGTGTTATAAGAAAATACAACAACCAGTTGGAGGGAAGGAACAATCGCCGCCGGACCTCTCTTCCCAAAAGCATCTCCGTCCGCTCTGCAGCAGCCTCCGCCGCCGCCGCCGCTCCACTCAACATCCAATCGGTAGAATTTCTCAACTTTTATGTTTATTTGTTTGAAATTATGTATTATTTAAAAAACGTAATTAATAATAATAGTATCGGACAGCGGCGGGTGTGTGGTCCGGTGGAGTTGGAGGTGTACAAGCAGGGGATGGAGAAGACGGAGGTGTGCAAGAAATGGGAGGAGAGCGGGGGGTGCCCTTACGGGGAGCATTGCCGATTTGCCCACGGGGTTGAAGAGCTGCGGCCGGTCATAAGACACCCACGTTACAAGACACAGATTTGTCGGATGGTACTGAGCGGTGAGAAGTGTTGTTATGGTCACCGCTGCCATTTTCGCCACTCTCTCACCCACCAGTAG

mRNA sequence

ATGTGCCCGCCATTGCCCTCCACTCTTTCTTCAACCGCCGAAGCCTCTCCAAACTCGCCCCAACCGGAGAATCTCTGCAGCCTGCATTTCGTTTCAATGTACCACTCCATTTTCCCTCCATTGTTATCATCATCCTCTCTTTCATTCACGCCCTCCTCCTCCTCCTCCTCCTCCTCCGCTGACGACGACTTCAACAACCCCTGCACCGCCGCTCCCACTTCCACGACCGACGATCTCCTTTTCCAGGCCCGGCTTATATTGGAGCACCGTGAGCTTTGTCAACGCCATGATCTCTGCCTCCGCCGCCTCCGTCAAGTCACCGACGATGTAGATTGTCTTCGACGGGAGAATGCGCAGCTCCAATTGGCCAACGCCGAGCTCATTAAGATTCTTTCGTCGAAGACGGCGGTTGATGATCTCGTTGCGATTCCGAATTCCCATCTCCGATCTCTGATTGGAGAAGGGCAAAACGGGGAGGAAGTTGGTTATGAAATTATAAGTCCGACGAGTGTTATAAGAAAATACAACAACCAGTTGGAGGGAAGGAACAATCGCCGCCGGACCTCTCTTCCCAAAAGCATCTCCGTCCGCTCTGCAGCAGCCTCCGCCGCCGCCGCCGCTCCACTCAACATCCAATCGGTAGAATTTCTCAACTTTTATGTTTATTTGTTTGAAATTATGTATTATTTAAAAAACGTAATTAATAATAATAGTATCGGACAGCGGCGGGTGTGTGGTCCGGTGGAGTTGGAGGTGTACAAGCAGGGGATGGAGAAGACGGAGGTGTGCAAGAAATGGGAGGAGAGCGGGGGGTGCCCTTACGGGGAGCATTGCCGATTTGCCCACGGGGTTGAAGAGCTGCGGCCGGTCATAAGACACCCACGTTACAAGACACAGATTTGTCGGATGGTACTGAGCGGTGAGAAGTGTTGTTATGGTCACCGCTGCCATTTTCGCCACTCTCTCACCCACCAGTAG

Coding sequence (CDS)

ATGTGCCCGCCATTGCCCTCCACTCTTTCTTCAACCGCCGAAGCCTCTCCAAACTCGCCCCAACCGGAGAATCTCTGCAGCCTGCATTTCGTTTCAATGTACCACTCCATTTTCCCTCCATTGTTATCATCATCCTCTCTTTCATTCACGCCCTCCTCCTCCTCCTCCTCCTCCTCCGCTGACGACGACTTCAACAACCCCTGCACCGCCGCTCCCACTTCCACGACCGACGATCTCCTTTTCCAGGCCCGGCTTATATTGGAGCACCGTGAGCTTTGTCAACGCCATGATCTCTGCCTCCGCCGCCTCCGTCAAGTCACCGACGATGTAGATTGTCTTCGACGGGAGAATGCGCAGCTCCAATTGGCCAACGCCGAGCTCATTAAGATTCTTTCGTCGAAGACGGCGGTTGATGATCTCGTTGCGATTCCGAATTCCCATCTCCGATCTCTGATTGGAGAAGGGCAAAACGGGGAGGAAGTTGGTTATGAAATTATAAGTCCGACGAGTGTTATAAGAAAATACAACAACCAGTTGGAGGGAAGGAACAATCGCCGCCGGACCTCTCTTCCCAAAAGCATCTCCGTCCGCTCTGCAGCAGCCTCCGCCGCCGCCGCCGCTCCACTCAACATCCAATCGGTAGAATTTCTCAACTTTTATGTTTATTTGTTTGAAATTATGTATTATTTAAAAAACGTAATTAATAATAATAGTATCGGACAGCGGCGGGTGTGTGGTCCGGTGGAGTTGGAGGTGTACAAGCAGGGGATGGAGAAGACGGAGGTGTGCAAGAAATGGGAGGAGAGCGGGGGGTGCCCTTACGGGGAGCATTGCCGATTTGCCCACGGGGTTGAAGAGCTGCGGCCGGTCATAAGACACCCACGTTACAAGACACAGATTTGTCGGATGGTACTGAGCGGTGAGAAGTGTTGTTATGGTCACCGCTGCCATTTTCGCCACTCTCTCACCCACCAGTAG

Protein sequence

MCPPLPSTLSSTAEASPNSPQPENLCSLHFVSMYHSIFPPLLSSSSLSFTPSSSSSSSSADDDFNNPCTAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRRENAQLQLANAELIKILSSKTAVDDLVAIPNSHLRSLIGEGQNGEEVGYEIISPTSVIRKYNNQLEGRNNRRRTSLPKSISVRSAAASAAAAAPLNIQSVEFLNFYVYLFEIMYYLKNVINNNSIGQRRVCGPVELEVYKQGMEKTEVCKKWEESGGCPYGEHCRFAHGVEELRPVIRHPRYKTQICRMVLSGEKCCYGHRCHFRHSLTHQ

Homology

[Close]

BLAST of Cp4.1LG01g25920 vs. ExPASy Swiss-Prot
Match: Q9C9N3 (Zinc finger CCCH domain-containing protein 14 OS=Arabidopsis thaliana OX=3702 GN=At1g66810 PE=2 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 7.5e-50
Identity = 133/333 (39.94%), Postives = 187/333 (56.16%), Query Frame = 0


Query: 6   PSTLSSTAEASPNSPQPENLCSLHFVSMYHSIFPPLLSSSSLSFTPSSSSSSSSADDDFN 65
           P  LS  +E S N+   E   +  F S+Y+SIF P     SLS +P SSSS  S  D   
Sbjct: 22  PPPLSPISEQSFNNKHQEEFAA-SFASLYNSIFSP----ESLSPSPPSSSSPPSRVD--- 81

Query: 66  NPCTAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRRENAQLQLANA 125
                   +TT+  L QA+LILE+ EL + ++LCL RL+ +  ++D LR EN  L+  N+
Sbjct: 82  --------TTTEHRLLQAKLILEYDELNEHYELCLNRLQSLMTELDSLRHENDSLRFENS 141

Query: 126 ELIKIL----SSKTAVDDLVAIPNSHLRSLIGEGQNGEEVGYEIISPTSVIRKYNNQLEG 185
           +L+K++    SS ++V     I N   R  I + ++ +                      
Sbjct: 142 DLLKLIRISTSSSSSVSPPAPIHNRQFRHQISDSRSAK---------------------- 201

Query: 186 RNNRRRTSLPKSISVRSAAASAAAAAPLNIQSVEFLNFYVYLFEIMYYLKNVINNNSI-G 245
           RNN+ R SLPKSISVRS             Q    +N   + FE      + +++NS+  
Sbjct: 202 RNNQERNSLPKSISVRS-------------QGYLKIN---HGFEASDLQTSQLSSNSVSS 261

Query: 246 QRRVC--------GPVELEVYKQGMEKTEVCKKWEESGGCPYGEHCRFAHGVEELRPVIR 305
            ++VC          +ELEVY+QGM KTE+C KW+E+G C YG++C+FAHG++ELRPVIR
Sbjct: 262 SQKVCVVQTKGEREALELEVYRQGMMKTELCNKWQETGACCYGDNCQFAHGIDELRPVIR 300

Query: 306 HPRYKTQICRMVLSGEKCCYGHRCHFRHSLTHQ 326
           HPRYKT++CRM+++G  C YGHRCHFRHSLT Q
Sbjct: 322 HPRYKTEVCRMMVTGAMCPYGHRCHFRHSLTDQ 300

[Close]

BLAST of Cp4.1LG01g25920 vs. ExPASy Swiss-Prot
Match: A2ZVY5 (Zinc finger CCCH domain-containing protein 9 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0645000 PE=2 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.6e-39
Identity = 125/332 (37.65%), Postives = 168/332 (50.60%), Query Frame = 0


Query: 9   LSSTAEASPNSPQPENLCSLHFVSMYHSIFPPLLSSSSLSFTPSSSSSSSSADDDFNNPC 68
           L+S+    P+       CS  F   +    P  L ++S+S +PSSS+S     DD     
Sbjct: 25  LASSPRYLPSGDDALYRCSSPFSPSFGFSSPSPL-ATSVSLSPSSSASLVDDGDD----- 84

Query: 69  TAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRRENAQLQLANAEL- 128
             A    T   L  ARL L+++E+  R++LCL  L +  ++   LR ENA+L++ N++L 
Sbjct: 85  GGAAADATGQRLQLARLALQYQEVADRYELCLSHLAEAAEEAAALRLENAELRVTNSDLA 144

Query: 129 --IKILSSKTAVDDLVAIPNSHLRSLIGEGQNGEEVGYEIISPTSVIRKYNNQLEGRNNR 188
             + +LS K      VA+ +   R  +GE                  +K     + R   
Sbjct: 145 LRLALLSGKHTA--AVAVADEIRRLRLGE------------------QKVAAATKERTPE 204

Query: 189 RRTSLPKSISVRSA----------AASAAAAAPLNIQSVEFLNFYVYLFEIMYYLKNVIN 248
           +   LPKSISVRS           AA+A +AAP                +  Y      +
Sbjct: 205 KLAVLPKSISVRSTSYLKLNQQSQAATATSAAPNRKPRTSSNPTNPPNSQRAY------D 264

Query: 249 NNSIGQRRVCGP----VELEVYKQGMEKTEVCKKWEESGGCPYGEHCRFAHGVEELRPVI 308
               G  +   P     ELEVY QGM KTE+C KWEE+G CPYG+ C+FAHGV ELRPVI
Sbjct: 265 GGKKGDEQKAQPADSGAELEVYNQGMFKTELCNKWEETGDCPYGDQCQFAHGVTELRPVI 324

Query: 309 RHPRYKTQICRMVLSGEKCCYGHRCHFRHSLT 324
           RHPRYKT +CRMVL+G+ C YGHRCHFRHSLT
Sbjct: 325 RHPRYKTAVCRMVLAGDVCPYGHRCHFRHSLT 324

[Close]

BLAST of Cp4.1LG01g25920 vs. ExPASy Swiss-Prot
Match: Q6L5G1 (Zinc finger CCCH domain-containing protein 39 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0576300 PE=2 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 2.1e-39
Identity = 112/292 (38.36%), Postives = 153/292 (52.40%), Query Frame = 0


Query: 48  SFTPSSSSSSSSADDDFNNPCTAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVT 107
           SF+  SSSS S  DD       A   + T+  L  A L L+++E+  R +LCL  L    
Sbjct: 66  SFSHCSSSSDSVVDDGDG----AGAAAATEHRLHLAHLALQYQEMANRFELCLSHLADAA 125

Query: 108 DDVDCLRRENAQLQLANAEL-IKILSSKTAVDDLVAIPNSHLRSLIGEGQNGEEVGYEII 167
           D+   LR+ENA+L++AN +L  +I          +A+     R  + + Q    +     
Sbjct: 126 DEAAALRQENAELRVANNDLACRIAKFGGRQSSAIALAGDLRRLRLPKEQTVPALPPPPQ 185

Query: 168 SPTSVIRKYNNQLEGRNNRRRTSLPKSISVRSA-------AASAAAAAPLNIQSVEFLNF 227
           SP + +       E     ++  LPKSIS+RS              + P+N+ S      
Sbjct: 186 SPPAALMNPVAVPE-----KQAVLPKSISIRSTGYQKLNQGGKHRVSKPVNVGSQR---- 245

Query: 228 YVYLFEIMYYLKNVINNNSIGQRRV--------CGPVELEVYKQGMEKTEVCKKWEESGG 287
            V++          I+    G+ +V         G +E EVY QGM KTE+C KWEE+G 
Sbjct: 246 -VFV---------GIDGAEGGEHKVGVKKEEPPMGGLEFEVYNQGMFKTELCNKWEETGA 305

Query: 288 CPYGEHCRFAHGVEELRPVIRHPRYKTQICRMVLSGEKCCYGHRCHFRHSLT 324
           CPYG+ C+FAHGV ELRPVIRHPRYKTQ+CRMVL+G  C YGHRCHFRHS+T
Sbjct: 306 CPYGDQCQFAHGVAELRPVIRHPRYKTQVCRMVLAGGVCPYGHRCHFRHSIT 334

[Close]

BLAST of Cp4.1LG01g25920 vs. ExPASy Swiss-Prot
Match: Q9C9F5 (Zinc finger CCCH domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=At1g68200 PE=2 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 3.6e-36
Identity = 106/295 (35.93%), Postives = 159/295 (53.90%), Query Frame = 0


Query: 48  SFTPSSSSSSSSADDDFNNPCTAAPTSTTDDLLFQARLILEHR-ELCQRHDLCLRRLRQV 107
           S++ SS+ +SSS           + +  +D L    R I++ R ++  R  LC  RL + 
Sbjct: 9   SYSGSSAGNSSSGG-------VVSSSLYSDQLYKSTRNIMQQRQDMVNREALCYTRLHEA 68

Query: 108 TDDVDCLRRENAQLQLANAELIKILSS--KTAVDDLV--AIPNSHLRSLIGEGQNGEEVG 167
           + + + LR EN +L+  N  L   L+S  ++++ +      P   L +L   G + +EV 
Sbjct: 69  SLEAEALRLENTELRSMNLRLKNELNSLIRSSIQNRFDHRSPLRMLSNLSIGGNDADEVE 128

Query: 168 YE--IISPTSVIRKYNNQLEGRNNRRRTSLPKSISVRS----------AAASAAAAAPLN 227
            +   ++   V  K    +    +  R+SLPKSISVRS            A+A +  P  
Sbjct: 129 NQNRTVNRDDVNDKSPTSVMENEDLNRSSLPKSISVRSNGYSKASQGGGGAAAQSGKPRG 188

Query: 228 IQSVEFLNFYVYLFEIMYYLKNVINNNSIGQRRVCGPVELEVYKQGMEKTEVCKKWEESG 287
             +       V   + +Y        +   +      +E+EVY QGM KTE+C KW+E+G
Sbjct: 189 TVTKPGTCGQVSTTQKVYVRGGGKKEDQEEE------IEVEVYNQGMTKTELCNKWQETG 248

Query: 288 GCPYGEHCRFAHGVEELRPVIRHPRYKTQICRMVLSGEKCCYGHRCHFRHSLTHQ 326
            CPYG+HC+FAHG++ELRPVIRHPRYKT++CRMVL+G+ C YGHRCHFRHSL+ Q
Sbjct: 249 TCPYGDHCQFAHGIKELRPVIRHPRYKTEVCRMVLAGDNCPYGHRCHFRHSLSEQ 290

[Close]

BLAST of Cp4.1LG01g25920 vs. ExPASy Swiss-Prot
Match: Q10MN8 (Putative zinc finger CCCH domain-containing protein 21 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0301500 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 4.2e-24
Identity = 94/300 (31.33%), Postives = 136/300 (45.33%), Query Frame = 0


Query: 38  FPPLLSSSSLS--FTPSSSSSSSSADDDFNNPCTAAPTSTTDDLLFQARLILEHRELCQR 97
           FP L  +SSL    T  SS  S      +++P  A+     +  + +A ++L  R + +R
Sbjct: 181 FPSLPWASSLEKPLTSPSSCVSDGRSGGYSSPLGASAERERE--VREAEMLL--RAIAER 240

Query: 98  HDLCLRRLRQVTDDVDCLRRENAQLQLANAELIKILSSKTAVDDLVAIPNSHLRSLIGEG 157
           +D C  RLR    ++  L RE  +L                     A  N HL  L+ E 
Sbjct: 241 YDDCFLRLRDAAAELSDLHRERLRL---------------------AAENLHLSLLLEEL 300

Query: 158 QNGEEVGYEIISPTSVIRKYNNQLEGRNNRRRTSLPKSISVRSAA-----ASAAAAAPLN 217
           ++ +      ++P  +           +   +   PKSIS+RS            A P  
Sbjct: 301 ESEQRKQASAMAPPKL---------EEDEAAQGGAPKSISIRSPGYLSQKPPQGQARPQR 360

Query: 218 IQ-------SVEFLNFYVYLFEIMYYLKN--VINNNSIGQRRVCGPVELEVYKQGMEKTE 277
           ++        +   N  +++       K      +    + +  G VE+E Y+QG  KTE
Sbjct: 361 LRVRASQAMEISHPNCLIFVMGNQCSPKEAAAAGDEEDEEDKGGGEVEVEAYRQGAAKTE 420

Query: 278 VCKKWEESGGCPYGEHCRFAHGVEELRPVIRHPRYKTQICRMVLSGEKCCYGHRCHFRHS 322
           +C KWE  G CPYG  CRFAHG++ELRPVIRHPRYKT  C+M  +   C YGHRCHFRHS
Sbjct: 421 LCNKWER-GACPYGARCRFAHGLQELRPVIRHPRYKTLPCQMFAAASGCPYGHRCHFRHS 445

[Close]

BLAST of Cp4.1LG01g25920 vs. NCBI nr
Match: XP_023552705.1 (zinc finger CCCH domain-containing protein 14-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 572 bits (1473), Expect = 1.17e-204
Identity = 297/325 (91.38%), Postives = 297/325 (91.38%), Query Frame = 0


Query: 1   MCPPLPSTLSSTAEASPNSPQPENLCSLHFVSMYHSIFPPLLSSSSLSFTPSSSSSSSSA 60
           MCPPLPSTLSSTAEASPNSPQPENLCSLHFVSMYHSIFPPLLSSSSLSFTPSSSSSSSSA
Sbjct: 5   MCPPLPSTLSSTAEASPNSPQPENLCSLHFVSMYHSIFPPLLSSSSLSFTPSSSSSSSSA 64

Query: 61  DDDFNNPCTAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRRENAQL 120
           DDDFNNPCTAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRRENAQL
Sbjct: 65  DDDFNNPCTAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRRENAQL 124

Query: 121 QLANAELIKILSSKTAVDDLVAIPNSHLRSLIGEGQNGEEVGYEIISPTSVIRKYNNQLE 180
           QLANAELIKILSSKTAVDDLVAIPNSHLRSLIGEGQNGEEVGYEIISPTSVIRKYNNQLE
Sbjct: 125 QLANAELIKILSSKTAVDDLVAIPNSHLRSLIGEGQNGEEVGYEIISPTSVIRKYNNQLE 184

Query: 181 GRNNRRRTSLPKSISVRSAAASAAAAAPLNIQSVEFLNFYVYLFEIMYYLKNVINNNSIG 240
           GRNNRRRTSLPKSISVRSAAASAAAAAPLNIQS                           
Sbjct: 185 GRNNRRRTSLPKSISVRSAAASAAAAAPLNIQS--------------------------- 244

Query: 241 QRRVCGPVELEVYKQGMEKTEVCKKWEESGGCPYGEHCRFAHGVEELRPVIRHPRYKTQI 300
            RRVCGPVELEVYKQGMEKTEVCKKWEESGGCPYGEHCRFAHGVEELRPVIRHPRYKTQI
Sbjct: 245 -RRVCGPVELEVYKQGMEKTEVCKKWEESGGCPYGEHCRFAHGVEELRPVIRHPRYKTQI 301

Query: 301 CRMVLSGEKCCYGHRCHFRHSLTHQ 325
           CRMVLSGEKCCYGHRCHFRHSLTHQ
Sbjct: 305 CRMVLSGEKCCYGHRCHFRHSLTHQ 301

[Close]

BLAST of Cp4.1LG01g25920 vs. NCBI nr
Match: KAG7033379.1 (Zinc finger CCCH domain-containing protein 14, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 545 bits (1405), Expect = 2.41e-194
Identity = 285/324 (87.96%), Postives = 290/324 (89.51%), Query Frame = 0


Query: 1   MCPPLPSTLSSTAEASPNSPQPENLCSLHFVSMYHSIFPPLLSSSSLSFTPSSSSSSSSA 60
           MCPPLPS+LSSTAEASPNSP+PENLC+LHFVSMYHSIFPPLLSSSSLSFTPS SSSSS A
Sbjct: 5   MCPPLPSSLSSTAEASPNSPEPENLCTLHFVSMYHSIFPPLLSSSSLSFTPSPSSSSS-A 64

Query: 61  DDDFNNPCTAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRRENAQL 120
           DDDFNNPCTAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRRENAQL
Sbjct: 65  DDDFNNPCTAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRRENAQL 124

Query: 121 QLANAELIKILSSKTAVDDLVAIPNSHLRSLIGEGQNGEEVGYEIISPTSVIRKYNNQLE 180
           QLANAELIKILSSKTAVDDLVAIPNSHLRSLIG+GQNGEEVGYEIISPTSVIRKYNNQ E
Sbjct: 125 QLANAELIKILSSKTAVDDLVAIPNSHLRSLIGDGQNGEEVGYEIISPTSVIRKYNNQFE 184

Query: 181 GRNNRRRTSLPKSISVRSAAASAAAAAPLNIQSVEFLNFYVYLFEIMYYLKNVINNNSIG 240
           GRNNRRRTSLPKSISVRSAAASAA   PLNIQS                           
Sbjct: 185 GRNNRRRTSLPKSISVRSAAASAA---PLNIQS--------------------------- 244

Query: 241 QRRVCGPVELEVYKQGMEKTEVCKKWEESGGCPYGEHCRFAHGVEELRPVIRHPRYKTQI 300
            RRVCGPVELEVYKQGMEKTE+CKKWEESGGCPYGEHCRFAHGVEELRPVIRHPRYKTQI
Sbjct: 245 -RRVCGPVELEVYKQGMEKTELCKKWEESGGCPYGEHCRFAHGVEELRPVIRHPRYKTQI 296

Query: 301 CRMVLSGEKCCYGHRCHFRHSLTH 324
           CRMVLSGEKCCYGHRCHFRHSLTH
Sbjct: 305 CRMVLSGEKCCYGHRCHFRHSLTH 296

[Close]

BLAST of Cp4.1LG01g25920 vs. NCBI nr
Match: KAG6602692.1 (Zinc finger CCCH domain-containing protein 14, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 543 bits (1398), Expect = 3.02e-193
Identity = 284/324 (87.65%), Postives = 291/324 (89.81%), Query Frame = 0


Query: 1   MCPPLPSTLSSTAEASPNSPQPENLCSLHFVSMYHSIFPPLLSSSSLSFTPSSSSSSSSA 60
           MCPPLPS+LSSTAEASPNSP+PENLC+LHFVSMYHSIFPPLLSSSSLSFTPS SSSSS A
Sbjct: 5   MCPPLPSSLSSTAEASPNSPEPENLCTLHFVSMYHSIFPPLLSSSSLSFTPSPSSSSS-A 64

Query: 61  DDDFNNPCTAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRRENAQL 120
           DDDFNNPCTAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRRENAQL
Sbjct: 65  DDDFNNPCTAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRRENAQL 124

Query: 121 QLANAELIKILSSKTAVDDLVAIPNSHLRSLIGEGQNGEEVGYEIISPTSVIRKYNNQLE 180
           QLANA+LIKILSSKTAVDDLVAIPNSHLRSLI +GQNGEEVGYEIISPTSVIRKYNNQ +
Sbjct: 125 QLANAKLIKILSSKTAVDDLVAIPNSHLRSLIRDGQNGEEVGYEIISPTSVIRKYNNQFD 184

Query: 181 GRNNRRRTSLPKSISVRSAAASAAAAAPLNIQSVEFLNFYVYLFEIMYYLKNVINNNSIG 240
           GRNNRRRTSLPKSISVRSAAASAAAA PLNIQS                           
Sbjct: 185 GRNNRRRTSLPKSISVRSAAASAAAA-PLNIQS--------------------------- 244

Query: 241 QRRVCGPVELEVYKQGMEKTEVCKKWEESGGCPYGEHCRFAHGVEELRPVIRHPRYKTQI 300
            RRVCGPVELEVYKQGMEKTE+CKKWEESGGCPYGEHCRFAHGVEELRPVIRHPRYKTQI
Sbjct: 245 -RRVCGPVELEVYKQGMEKTELCKKWEESGGCPYGEHCRFAHGVEELRPVIRHPRYKTQI 298

Query: 301 CRMVLSGEKCCYGHRCHFRHSLTH 324
           CRMVLSGEKCCYGHRCHFRHSLTH
Sbjct: 305 CRMVLSGEKCCYGHRCHFRHSLTH 298

[Close]

BLAST of Cp4.1LG01g25920 vs. NCBI nr
Match: XP_022956786.1 (zinc finger CCCH domain-containing protein 14-like [Cucurbita moschata])

HSP 1 Score: 530 bits (1366), Expect = 1.82e-188
Identity = 276/324 (85.19%), Postives = 285/324 (87.96%), Query Frame = 0


Query: 1   MCPPLPSTLSSTAEASPNSPQPENLCSLHFVSMYHSIFPPLLSSSSLSFTPSSSSSSSSA 60
           MCPPLPS+LSS+AEASPNSP+PENLC+LHFVSMYHSIFPPLLSSSSLS TPS SSS   A
Sbjct: 5   MCPPLPSSLSSSAEASPNSPEPENLCTLHFVSMYHSIFPPLLSSSSLSLTPSPSSS---A 64

Query: 61  DDDFNNPCTAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRRENAQL 120
           DDDFNNPCTAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRRENAQL
Sbjct: 65  DDDFNNPCTAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRRENAQL 124

Query: 121 QLANAELIKILSSKTAVDDLVAIPNSHLRSLIGEGQNGEEVGYEIISPTSVIRKYNNQLE 180
           +LANAELI+ILSSKTAVDDLV IPNSHL+SLIGEGQNGEEVGYEIISPTSVIRKYNNQ +
Sbjct: 125 RLANAELIEILSSKTAVDDLVGIPNSHLQSLIGEGQNGEEVGYEIISPTSVIRKYNNQFD 184

Query: 181 GRNNRRRTSLPKSISVRSAAASAAAAAPLNIQSVEFLNFYVYLFEIMYYLKNVINNNSIG 240
           GRNNRRRTSLPKSISVRSAAA    AAPLNIQS                           
Sbjct: 185 GRNNRRRTSLPKSISVRSAAA----AAPLNIQS--------------------------- 244

Query: 241 QRRVCGPVELEVYKQGMEKTEVCKKWEESGGCPYGEHCRFAHGVEELRPVIRHPRYKTQI 300
            RRVCGPVELEVYKQGMEKTE+CKKWEESGGCPYGEHCRFAHGVEELRPVIRHPRYKTQI
Sbjct: 245 -RRVCGPVELEVYKQGMEKTELCKKWEESGGCPYGEHCRFAHGVEELRPVIRHPRYKTQI 293

Query: 301 CRMVLSGEKCCYGHRCHFRHSLTH 324
           CRMVLSGEKCCYGHRCHFRHSLTH
Sbjct: 305 CRMVLSGEKCCYGHRCHFRHSLTH 293

[Close]

BLAST of Cp4.1LG01g25920 vs. NCBI nr
Match: XP_022991105.1 (zinc finger CCCH domain-containing protein 14-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 518 bits (1335), Expect = 9.25e-184
Identity = 276/326 (84.66%), Postives = 284/326 (87.12%), Query Frame = 0


Query: 1   MCPPLPSTLSSTAEASPNSPQPENLCSLHFVSMYHSIFPPLLSSSSLSFTPS-SSSSSSS 60
           MCPPLPS+LSSTAEASPNSP+PENLCSLHFVSMYHSIFPPLLSSSSLSFTPS SSSSSSS
Sbjct: 5   MCPPLPSSLSSTAEASPNSPEPENLCSLHFVSMYHSIFPPLLSSSSLSFTPSPSSSSSSS 64

Query: 61  ADDDFNNPCTAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRRENAQ 120
           ADDDFNNPCTA PTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCL+RENAQ
Sbjct: 65  ADDDFNNPCTATPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLQRENAQ 124

Query: 121 LQLANAELIKILSSKTAVDDLVAIPNSHLRSLIGEGQNGEEVGYEIISPTSVIRKYNNQL 180
           L+LANAELIKILSSKTAVDDL        +SLIG GQNGEEVGYEIISPTSVIRKYN+Q 
Sbjct: 125 LRLANAELIKILSSKTAVDDL--------QSLIGGGQNGEEVGYEIISPTSVIRKYNSQF 184

Query: 181 EGRNNRRRTSLPKSISVRSAAASAAAAAPLNIQSVEFLNFYVYLFEIMYYLKNVINNNSI 240
           +GRNNRRRTSLPKSISVRSAAASAAAA PLNIQS                          
Sbjct: 185 DGRNNRRRTSLPKSISVRSAAASAAAA-PLNIQS-------------------------- 244

Query: 241 GQRRVCGPVELEVYKQGMEKTEVCKKWEESGGCPYGEHCRFAHGVEELRPVIRHPRYKTQ 300
             RRVCGPVELEVYKQGM KTE+CKKWEESGGCPYGEHCRFAHGVEELRPVIRHPRYKTQ
Sbjct: 245 --RRVCGPVELEVYKQGMAKTELCKKWEESGGCPYGEHCRFAHGVEELRPVIRHPRYKTQ 293

Query: 301 ICRMVLSGEKCCYGHRCHFRHSLTHQ 325
           ICRMVLSGEKCCYGHRCHFRHSLTHQ
Sbjct: 305 ICRMVLSGEKCCYGHRCHFRHSLTHQ 293

[Close]

BLAST of Cp4.1LG01g25920 vs. ExPASy TrEMBL
Match: A0A6J1GXH1 (zinc finger CCCH domain-containing protein 14-like OS=Cucurbita moschata OX=3662 GN=LOC111458383 PE=4 SV=1)

HSP 1 Score: 530 bits (1366), Expect = 8.80e-189
Identity = 276/324 (85.19%), Postives = 285/324 (87.96%), Query Frame = 0


Query: 1   MCPPLPSTLSSTAEASPNSPQPENLCSLHFVSMYHSIFPPLLSSSSLSFTPSSSSSSSSA 60
           MCPPLPS+LSS+AEASPNSP+PENLC+LHFVSMYHSIFPPLLSSSSLS TPS SSS   A
Sbjct: 5   MCPPLPSSLSSSAEASPNSPEPENLCTLHFVSMYHSIFPPLLSSSSLSLTPSPSSS---A 64

Query: 61  DDDFNNPCTAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRRENAQL 120
           DDDFNNPCTAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRRENAQL
Sbjct: 65  DDDFNNPCTAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRRENAQL 124

Query: 121 QLANAELIKILSSKTAVDDLVAIPNSHLRSLIGEGQNGEEVGYEIISPTSVIRKYNNQLE 180
           +LANAELI+ILSSKTAVDDLV IPNSHL+SLIGEGQNGEEVGYEIISPTSVIRKYNNQ +
Sbjct: 125 RLANAELIEILSSKTAVDDLVGIPNSHLQSLIGEGQNGEEVGYEIISPTSVIRKYNNQFD 184

Query: 181 GRNNRRRTSLPKSISVRSAAASAAAAAPLNIQSVEFLNFYVYLFEIMYYLKNVINNNSIG 240
           GRNNRRRTSLPKSISVRSAAA    AAPLNIQS                           
Sbjct: 185 GRNNRRRTSLPKSISVRSAAA----AAPLNIQS--------------------------- 244

Query: 241 QRRVCGPVELEVYKQGMEKTEVCKKWEESGGCPYGEHCRFAHGVEELRPVIRHPRYKTQI 300
            RRVCGPVELEVYKQGMEKTE+CKKWEESGGCPYGEHCRFAHGVEELRPVIRHPRYKTQI
Sbjct: 245 -RRVCGPVELEVYKQGMEKTELCKKWEESGGCPYGEHCRFAHGVEELRPVIRHPRYKTQI 293

Query: 301 CRMVLSGEKCCYGHRCHFRHSLTH 324
           CRMVLSGEKCCYGHRCHFRHSLTH
Sbjct: 305 CRMVLSGEKCCYGHRCHFRHSLTH 293

[Close]

BLAST of Cp4.1LG01g25920 vs. ExPASy TrEMBL
Match: A0A6J1JRY1 (zinc finger CCCH domain-containing protein 14-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487801 PE=4 SV=1)

HSP 1 Score: 518 bits (1335), Expect = 4.48e-184
Identity = 276/326 (84.66%), Postives = 284/326 (87.12%), Query Frame = 0


Query: 1   MCPPLPSTLSSTAEASPNSPQPENLCSLHFVSMYHSIFPPLLSSSSLSFTPS-SSSSSSS 60
           MCPPLPS+LSSTAEASPNSP+PENLCSLHFVSMYHSIFPPLLSSSSLSFTPS SSSSSSS
Sbjct: 5   MCPPLPSSLSSTAEASPNSPEPENLCSLHFVSMYHSIFPPLLSSSSLSFTPSPSSSSSSS 64

Query: 61  ADDDFNNPCTAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRRENAQ 120
           ADDDFNNPCTA PTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCL+RENAQ
Sbjct: 65  ADDDFNNPCTATPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLQRENAQ 124

Query: 121 LQLANAELIKILSSKTAVDDLVAIPNSHLRSLIGEGQNGEEVGYEIISPTSVIRKYNNQL 180
           L+LANAELIKILSSKTAVDDL        +SLIG GQNGEEVGYEIISPTSVIRKYN+Q 
Sbjct: 125 LRLANAELIKILSSKTAVDDL--------QSLIGGGQNGEEVGYEIISPTSVIRKYNSQF 184

Query: 181 EGRNNRRRTSLPKSISVRSAAASAAAAAPLNIQSVEFLNFYVYLFEIMYYLKNVINNNSI 240
           +GRNNRRRTSLPKSISVRSAAASAAAA PLNIQS                          
Sbjct: 185 DGRNNRRRTSLPKSISVRSAAASAAAA-PLNIQS-------------------------- 244

Query: 241 GQRRVCGPVELEVYKQGMEKTEVCKKWEESGGCPYGEHCRFAHGVEELRPVIRHPRYKTQ 300
             RRVCGPVELEVYKQGM KTE+CKKWEESGGCPYGEHCRFAHGVEELRPVIRHPRYKTQ
Sbjct: 245 --RRVCGPVELEVYKQGMAKTELCKKWEESGGCPYGEHCRFAHGVEELRPVIRHPRYKTQ 293

Query: 301 ICRMVLSGEKCCYGHRCHFRHSLTHQ 325
           ICRMVLSGEKCCYGHRCHFRHSLTHQ
Sbjct: 305 ICRMVLSGEKCCYGHRCHFRHSLTHQ 293

[Close]

BLAST of Cp4.1LG01g25920 vs. ExPASy TrEMBL
Match: A0A0A0LQS7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G404980 PE=4 SV=1)

HSP 1 Score: 379 bits (972), Expect = 4.05e-128
Identity = 217/333 (65.17%), Postives = 251/333 (75.38%), Query Frame = 0


Query: 1   MCPPL-PSTLSSTAEASPNSPQPENLCSLHFVSMYHSIFPPLLSSSSL----SFTPSSSS 60
           MCPPL PSTLS+T E S  + + E+    HF SMYHSIFPPLLSSSSL    SFTPS SS
Sbjct: 35  MCPPLLPSTLSTTTELS--AVEYEDF-GHHFASMYHSIFPPLLSSSSLPNSLSFTPSPSS 94

Query: 61  SSSSADDDFNNPCTA-APTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLR 120
               ADDD NN CT  A TSTTDDLLFQARLILE+R L  RHDLCLRRLRQV +D D LR
Sbjct: 95  ----ADDDHNNHCTTPAATSTTDDLLFQARLILENRHLHHRHDLCLRRLRQVAEDADYLR 154

Query: 121 RENAQLQLANAELIKILSSKTAVDDLVAIPNSHLRSLIGEGQNGEEVGYEIISPTSVIRK 180
           +ENAQL+LANAEL+K++SSKTAVDDLV+IPNSHLR+LIG GQ+G+E+GY++ISPTSVI K
Sbjct: 155 QENAQLRLANAELVKVISSKTAVDDLVSIPNSHLRTLIGGGQSGDEIGYDMISPTSVIGK 214

Query: 181 YNNQLEGRNNRRRTSLPKSISVRSAAASAAAAAPLNIQSVEFLNFYVYLFEIMYYLKNVI 240
           YN+Q +GRNN RR SLP+SISVRSAAA  A++  LNI+S                 +   
Sbjct: 215 YNDQFDGRNNLRRNSLPRSISVRSAAA--ASSVQLNIKS-----------------RGAS 274

Query: 241 NNNSIG--QRRVCGPVELEVYKQGMEKTEVCKKWEESGGCPYGEHCRFAHGVEELRPVIR 300
              S G  ++R     E EVY QG  KTE+C KW+E G CPYG HCRFAHG+EELRPV+R
Sbjct: 275 TPVSDGGSRKREEEATEFEVYNQGTTKTELCNKWQEIGDCPYGNHCRFAHGLEELRPVMR 334

Query: 301 HPRYKTQICRMVLSGEKCCYGHRCHFRHSLTHQ 325
           HPRYKTQ+CRMVL+GEKC YGHRCHFRHSL+ Q
Sbjct: 335 HPRYKTQMCRMVLAGEKCPYGHRCHFRHSLSEQ 341

[Close]

BLAST of Cp4.1LG01g25920 vs. ExPASy TrEMBL
Match: A0A1S3B3V9 (zinc finger CCCH domain-containing protein 14-like OS=Cucumis melo OX=3656 GN=LOC103485461 PE=4 SV=1)

HSP 1 Score: 377 bits (967), Expect = 8.86e-128
Identity = 219/334 (65.57%), Postives = 252/334 (75.45%), Query Frame = 0


Query: 1   MCPPL-PSTLSSTAEASPNSPQPENLCSLHFVSMYHSIFPPLLSSSSL----SFTPSSSS 60
           MCPPL PS+LSST E S    + E+  S HF SMYHSIFPPLLSSSSL    SFTPS SS
Sbjct: 5   MCPPLLPSSLSSTTELS--VAEFEDF-SQHFASMYHSIFPPLLSSSSLPNSLSFTPSPSS 64

Query: 61  SSSSADDDFNNPCTAAP-TSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLR 120
               ADDD NN CT A  TSTTDDLL QARLILE+R L  RHDLCLRRLRQV+DD D LR
Sbjct: 65  ----ADDDHNNHCTTATATSTTDDLLVQARLILENRHLRHRHDLCLRRLRQVSDDADYLR 124

Query: 121 RENAQLQLANAELIKILSSKTAVDDLVAIPNSHLRSLIGEGQNGEEVGY-EIISPTSVIR 180
           +ENAQL+LANAEL+K++SSKTA+DDLV+IPNSHLRSLIG GQ+G+E+GY +IISPTSVI 
Sbjct: 125 QENAQLRLANAELVKVISSKTAIDDLVSIPNSHLRSLIGGGQSGDEIGYNDIISPTSVIG 184

Query: 181 KYNNQLEGRNNRRRTSLPKSISVRSAAASAAAAAPLNIQSVEFLNFYVYLFEIMYYLKNV 240
           KYN+Q +GRNN  R SLPKSIS+RSAAA AA++AP NI+                 L+  
Sbjct: 185 KYNDQFDGRNNLHRISLPKSISIRSAAA-AASSAPPNIK-----------------LRGA 244

Query: 241 INNNSIG--QRRVCGPVELEVYKQGMEKTEVCKKWEESGGCPYGEHCRFAHGVEELRPVI 300
               S G  ++R     E EVY QG  KTE+C KW+E G CPYG HCRFAHG+EELRPV+
Sbjct: 245 CTPVSDGGSRKREEEATEFEVYNQGTTKTELCNKWQEIGDCPYGNHCRFAHGLEELRPVM 304

Query: 301 RHPRYKTQICRMVLSGEKCCYGHRCHFRHSLTHQ 325
           RHPRYKTQ+CRMVL+G+KC YGHRCHFRHSL+ Q
Sbjct: 305 RHPRYKTQMCRMVLAGQKCPYGHRCHFRHSLSEQ 313

[Close]

BLAST of Cp4.1LG01g25920 vs. ExPASy TrEMBL
Match: A0A5D3BUE0 (Zinc finger CCCH domain-containing protein 14-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1154G00430 PE=4 SV=1)

HSP 1 Score: 377 bits (967), Expect = 8.86e-128
Identity = 219/334 (65.57%), Postives = 252/334 (75.45%), Query Frame = 0


Query: 1   MCPPL-PSTLSSTAEASPNSPQPENLCSLHFVSMYHSIFPPLLSSSSL----SFTPSSSS 60
           MCPPL PS+LSST E S    + E+  S HF SMYHSIFPPLLSSSSL    SFTPS SS
Sbjct: 5   MCPPLLPSSLSSTTELS--VAEFEDF-SQHFASMYHSIFPPLLSSSSLPNSLSFTPSPSS 64

Query: 61  SSSSADDDFNNPCTAAP-TSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLR 120
               ADDD NN CT A  TSTTDDLL QARLILE+R L  RHDLCLRRLRQV+DD D LR
Sbjct: 65  ----ADDDHNNHCTTATATSTTDDLLVQARLILENRHLRHRHDLCLRRLRQVSDDADYLR 124

Query: 121 RENAQLQLANAELIKILSSKTAVDDLVAIPNSHLRSLIGEGQNGEEVGY-EIISPTSVIR 180
           +ENAQL+LANAEL+K++SSKTA+DDLV+IPNSHLRSLIG GQ+G+E+GY +IISPTSVI 
Sbjct: 125 QENAQLRLANAELVKVISSKTAIDDLVSIPNSHLRSLIGGGQSGDEIGYNDIISPTSVIG 184

Query: 181 KYNNQLEGRNNRRRTSLPKSISVRSAAASAAAAAPLNIQSVEFLNFYVYLFEIMYYLKNV 240
           KYN+Q +GRNN  R SLPKSIS+RSAAA AA++AP NI+                 L+  
Sbjct: 185 KYNDQFDGRNNLHRISLPKSISIRSAAA-AASSAPPNIK-----------------LRGA 244

Query: 241 INNNSIG--QRRVCGPVELEVYKQGMEKTEVCKKWEESGGCPYGEHCRFAHGVEELRPVI 300
               S G  ++R     E EVY QG  KTE+C KW+E G CPYG HCRFAHG+EELRPV+
Sbjct: 245 CTPVSDGGSRKREEEATEFEVYNQGTTKTELCNKWQEIGDCPYGNHCRFAHGLEELRPVM 304

Query: 301 RHPRYKTQICRMVLSGEKCCYGHRCHFRHSLTHQ 325
           RHPRYKTQ+CRMVL+G+KC YGHRCHFRHSL+ Q
Sbjct: 305 RHPRYKTQMCRMVLAGQKCPYGHRCHFRHSLSEQ 313

[Close]

BLAST of Cp4.1LG01g25920 vs. TAIR 10
Match: AT1G66810.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 199.1 bits (505), Expect = 5.3e-51
Identity = 133/333 (39.94%), Postives = 187/333 (56.16%), Query Frame = 0


Query: 6   PSTLSSTAEASPNSPQPENLCSLHFVSMYHSIFPPLLSSSSLSFTPSSSSSSSSADDDFN 65
           P  LS  +E S N+   E   +  F S+Y+SIF P     SLS +P SSSS  S  D   
Sbjct: 22  PPPLSPISEQSFNNKHQEEFAA-SFASLYNSIFSP----ESLSPSPPSSSSPPSRVD--- 81

Query: 66  NPCTAAPTSTTDDLLFQARLILEHRELCQRHDLCLRRLRQVTDDVDCLRRENAQLQLANA 125
                   +TT+  L QA+LILE+ EL + ++LCL RL+ +  ++D LR EN  L+  N+
Sbjct: 82  --------TTTEHRLLQAKLILEYDELNEHYELCLNRLQSLMTELDSLRHENDSLRFENS 141

Query: 126 ELIKIL----SSKTAVDDLVAIPNSHLRSLIGEGQNGEEVGYEIISPTSVIRKYNNQLEG 185
           +L+K++    SS ++V     I N   R  I + ++ +                      
Sbjct: 142 DLLKLIRISTSSSSSVSPPAPIHNRQFRHQISDSRSAK---------------------- 201

Query: 186 RNNRRRTSLPKSISVRSAAASAAAAAPLNIQSVEFLNFYVYLFEIMYYLKNVINNNSI-G 245
           RNN+ R SLPKSISVRS             Q    +N   + FE      + +++NS+  
Sbjct: 202 RNNQERNSLPKSISVRS-------------QGYLKIN---HGFEASDLQTSQLSSNSVSS 261

Query: 246 QRRVC--------GPVELEVYKQGMEKTEVCKKWEESGGCPYGEHCRFAHGVEELRPVIR 305
            ++VC          +ELEVY+QGM KTE+C KW+E+G C YG++C+FAHG++ELRPVIR
Sbjct: 262 SQKVCVVQTKGEREALELEVYRQGMMKTELCNKWQETGACCYGDNCQFAHGIDELRPVIR 300

Query: 306 HPRYKTQICRMVLSGEKCCYGHRCHFRHSLTHQ 326
           HPRYKT++CRM+++G  C YGHRCHFRHSLT Q
Sbjct: 322 HPRYKTEVCRMMVTGAMCPYGHRCHFRHSLTDQ 300

[Close]

BLAST of Cp4.1LG01g25920 vs. TAIR 10
Match: AT1G68200.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 153.7 bits (387), Expect = 2.6e-37
Identity = 106/295 (35.93%), Postives = 159/295 (53.90%), Query Frame = 0


Query: 48  SFTPSSSSSSSSADDDFNNPCTAAPTSTTDDLLFQARLILEHR-ELCQRHDLCLRRLRQV 107
           S++ SS+ +SSS           + +  +D L    R I++ R ++  R  LC  RL + 
Sbjct: 9   SYSGSSAGNSSSGG-------VVSSSLYSDQLYKSTRNIMQQRQDMVNREALCYTRLHEA 68

Query: 108 TDDVDCLRRENAQLQLANAELIKILSS--KTAVDDLV--AIPNSHLRSLIGEGQNGEEVG 167
           + + + LR EN +L+  N  L   L+S  ++++ +      P   L +L   G + +EV 
Sbjct: 69  SLEAEALRLENTELRSMNLRLKNELNSLIRSSIQNRFDHRSPLRMLSNLSIGGNDADEVE 128

Query: 168 YE--IISPTSVIRKYNNQLEGRNNRRRTSLPKSISVRS----------AAASAAAAAPLN 227
            +   ++   V  K    +    +  R+SLPKSISVRS            A+A +  P  
Sbjct: 129 NQNRTVNRDDVNDKSPTSVMENEDLNRSSLPKSISVRSNGYSKASQGGGGAAAQSGKPRG 188

Query: 228 IQSVEFLNFYVYLFEIMYYLKNVINNNSIGQRRVCGPVELEVYKQGMEKTEVCKKWEESG 287
             +       V   + +Y        +   +      +E+EVY QGM KTE+C KW+E+G
Sbjct: 189 TVTKPGTCGQVSTTQKVYVRGGGKKEDQEEE------IEVEVYNQGMTKTELCNKWQETG 248

Query: 288 GCPYGEHCRFAHGVEELRPVIRHPRYKTQICRMVLSGEKCCYGHRCHFRHSLTHQ 326
            CPYG+HC+FAHG++ELRPVIRHPRYKT++CRMVL+G+ C YGHRCHFRHSL+ Q
Sbjct: 249 TCPYGDHCQFAHGIKELRPVIRHPRYKTEVCRMVLAGDNCPYGHRCHFRHSLSEQ 290

[Close]

BLAST of Cp4.1LG01g25920 vs. TAIR 10
Match: AT1G68200.2 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 153.3 bits (386), Expect = 3.4e-37
Identity = 106/293 (36.18%), Postives = 158/293 (53.92%), Query Frame = 0


Query: 48  SFTPSSSSSSSSADDDFNNPCTAAPTSTTDDLLFQARLILEHR-ELCQRHDLCLRRLRQV 107
           S++ SS+ +SSS           + +  +D L    R I++ R ++  R  LC  RL + 
Sbjct: 9   SYSGSSAGNSSSGG-------VVSSSLYSDQLYKSTRNIMQQRQDMVNREALCYTRLHEA 68

Query: 108 TDDVDCLRRENAQLQLANAELIKILSS--KTAVDDLV--AIPNSHLRSLIGEGQNGEEVG 167
           + + + LR EN +L+  N  L   L+S  ++++ +      P   L +L   G + +EV 
Sbjct: 69  SLEAEALRLENTELRSMNLRLKNELNSLIRSSIQNRFDHRSPLRMLSNLSIGGNDADEVE 128

Query: 168 YE--IISPTSVIRKYNNQLEGRNNRRRTSLPKSISVRS--------AAASAAAAAPLNIQ 227
            +   ++   V  K    +    +  R+SLPKSISVRS            AAA +     
Sbjct: 129 NQNRTVNRDDVNDKSPTSVMENEDLNRSSLPKSISVRSNGYSKASQGGGGAAAQSGKPRG 188

Query: 228 SVEFLNFYVYLFEIMYYLKNVINNNSIGQRRVCGPVELEVYKQGMEKTEVCKKWEESGGC 287
           +V        +     Y++         +      +E+EVY QGM KTE+C KW+E+G C
Sbjct: 189 TVTKPGTCGQVSTTKVYVRGGGKKEDQEEE-----IEVEVYNQGMTKTELCNKWQETGTC 248

Query: 288 PYGEHCRFAHGVEELRPVIRHPRYKTQICRMVLSGEKCCYGHRCHFRHSLTHQ 326
           PYG+HC+FAHG++ELRPVIRHPRYKT++CRMVL+G+ C YGHRCHFRHSL+ Q
Sbjct: 249 PYGDHCQFAHGIKELRPVIRHPRYKTEVCRMVLAGDNCPYGHRCHFRHSLSEQ 289

[Close]

BLAST of Cp4.1LG01g25920 vs. TAIR 10
Match: AT2G35430.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 49.7 bits (117), Expect = 5.2e-06
Identity = 17/29 (58.62%), Postives = 21/29 (72.41%), Query Frame = 0


Query: 259 KTEVCKKWEESGGCPYGEHCRFAHGVEEL 288
           KT +C KW+ +G CP+G HC FAHG  EL
Sbjct: 145 KTRICNKWQTTGYCPFGSHCHFAHGPSEL 173

[Close]

BLAST of Cp4.1LG01g25920 vs. TAIR 10
Match: AT1G32360.1 (Zinc finger (CCCH-type) family protein )

HSP 1 Score: 48.9 bits (115), Expect = 8.9e-06
Identity = 18/38 (47.37%), Postives = 24/38 (63.16%), Query Frame = 0


Query: 250 LEVYKQGMEKTEVCKKWEESGGCPYGEHCRFAHGVEEL 288
           +++ K    KT +C KWE +G CP+G  C FAHG  EL
Sbjct: 253 IQILKPSNWKTRICNKWEITGYCPFGAKCHFAHGAAEL 290

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g25920 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C9N3	7.5e-50	39.94	Zinc finger CCCH domain-containing protein 14 OS=Arabidopsis thaliana OX=3702 GN...	[more]
A2ZVY5	1.6e-39	37.65	Zinc finger CCCH domain-containing protein 9 OS=Oryza sativa subsp. japonica OX=...	[more]
Q6L5G1	2.1e-39	38.36	Zinc finger CCCH domain-containing protein 39 OS=Oryza sativa subsp. japonica OX...	[more]
Q9C9F5	3.6e-36	35.93	Zinc finger CCCH domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q10MN8	4.2e-24	31.33	Putative zinc finger CCCH domain-containing protein 21 OS=Oryza sativa subsp. ja...	[more]

BLAST of Cp4.1LG01g25920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023552705.1	1.17e-204	91.38	zinc finger CCCH domain-containing protein 14-like [Cucurbita pepo subsp. pepo]	[more]
KAG7033379.1	2.41e-194	87.96	Zinc finger CCCH domain-containing protein 14, partial [Cucurbita argyrosperma s...	[more]
KAG6602692.1	3.02e-193	87.65	Zinc finger CCCH domain-containing protein 14, partial [Cucurbita argyrosperma s...	[more]
XP_022956786.1	1.82e-188	85.19	zinc finger CCCH domain-containing protein 14-like [Cucurbita moschata]	[more]
XP_022991105.1	9.25e-184	84.66	zinc finger CCCH domain-containing protein 14-like isoform X1 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG01g25920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GXH1	8.80e-189	85.19	zinc finger CCCH domain-containing protein 14-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1JRY1	4.48e-184	84.66	zinc finger CCCH domain-containing protein 14-like isoform X1 OS=Cucurbita maxim...	[more]
A0A0A0LQS7	4.05e-128	65.17	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G404980 PE=4 SV=1	[more]
A0A1S3B3V9	8.86e-128	65.57	zinc finger CCCH domain-containing protein 14-like OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A5D3BUE0	8.86e-128	65.57	Zinc finger CCCH domain-containing protein 14-like OS=Cucumis melo var. makuwa O...	[more]

BLAST of Cp4.1LG01g25920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G66810.1	5.3e-51	39.94	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT1G68200.1	2.6e-37	35.93	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT1G68200.2	3.4e-37	36.18	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT2G35430.1	5.2e-06	58.62	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT1G32360.1	8.9e-06	47.37	Zinc finger (CCCH-type) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 103..130
None	No IPR available	GENE3D	4.10.1000.10		coord: 291..324 e-value: 1.1E-7 score: 33.0 coord: 253..290 e-value: 9.1E-16 score: 58.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR12547:SF139	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 14	coord: 50..325
None	No IPR available	PANTHER	PTHR12547	CCCH ZINC FINGER/TIS11-RELATED	coord: 50..325
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 257..284 e-value: 2.0E-8 score: 44.0 coord: 295..322 e-value: 0.047 score: 22.8
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 259..283 e-value: 5.1E-10 score: 39.0
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 295..323 score: 12.61482
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 257..285 score: 15.760169
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 255..289
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 291..322

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g25920.1	Cp4.1LG01g25920.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding