Cp4.1LG01g25900 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTCAAGGTGCAGATCAGCAAGACCCCTTGTGCCCCATGGAGAAGCTATGGCGAGCAGCAGAAACACGAAGCCAACGGGGACGTCGTTGAATGCATCGTCATGTTCGTGTCATGTTTCGTTTATGGTTCATCACCAAGAGAGGGCGAAGATGGCTTCGTCGAACCAAAGGGTTGTTCATGAGGCCATGAACGTTCACGAGGCTAAGTTTTGGAACGGTTATGGCGTTGTTGTCGACGAACATATCGATCGGAAGGCTGCTATGTACATATCGTCTGTGCAAGAACGGTTTAGACTTGAGGGGTTGATCAGCTGA ATGGATTCAAGGTGCAGATCAGCAAGACCCCTTGTGCCCCATGGAGAAGCTATGGCGAGCAGCAGAAACACGAAGCCAACGGGGACGTCGTTGAATGCATCGTCATGTTCGTGTCATGTTTCGTTTATGGTTCATCACCAAGAGAGGGCGAAGATGGCTTCGTCGAACCAAAGGGTTGTTCATGAGGCCATGAACGTTCACGAGGCTAAGTTTTGGAACGGTTATGGCGTTGTTGTCGACGAACATATCGATCGGAAGGCTGCTATGTACATATCGTCTGTGCAAGAACGGTTTAGACTTGAGGGGTTGATCAGCTGA ATGGATTCAAGGTGCAGATCAGCAAGACCCCTTGTGCCCCATGGAGAAGCTATGGCGAGCAGCAGAAACACGAAGCCAACGGGGACGTCGTTGAATGCATCGTCATGTTCGTGTCATGTTTCGTTTATGGTTCATCACCAAGAGAGGGCGAAGATGGCTTCGTCGAACCAAAGGGTTGTTCATGAGGCCATGAACGTTCACGAGGCTAAGTTTTGGAACGGTTATGGCGTTGTTGTCGACGAACATATCGATCGGAAGGCTGCTATGTACATATCGTCTGTGCAAGAACGGTTTAGACTTGAGGGGTTGATCAGCTGA MDSRCRSARPLVPHGEAMASSRNTKPTGTSLNASSCSCHVSFMVHHQERAKMASSNQRVVHEAMNVHEAKFWNGYGVVVDEHIDRKAAMYISSVQERFRLEGLIS Homology
BLAST of Cp4.1LG01g25900 vs. NCBI nr
Match: KAG6602687.1 (hypothetical protein SDJN03_07920, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 206 bits (523), Expect = 1.07e-66 Identity = 102/105 (97.14%), Postives = 102/105 (97.14%), Query Frame = 0
BLAST of Cp4.1LG01g25900 vs. NCBI nr
Match: KAA0056544.1 (hypothetical protein E6C27_scaffold288G00460 [Cucumis melo var. makuwa] >TYK02718.1 hypothetical protein E5676_scaffold1154G00160 [Cucumis melo var. makuwa]) HSP 1 Score: 125 bits (313), Expect = 1.32e-34 Identity = 77/114 (67.54%), Postives = 84/114 (73.68%), Query Frame = 0
BLAST of Cp4.1LG01g25900 vs. NCBI nr
Match: KAE8652260.1 (hypothetical protein Csa_022307 [Cucumis sativus]) HSP 1 Score: 122 bits (306), Expect = 3.85e-32 Identity = 68/94 (72.34%), Postives = 76/94 (80.85%), Query Frame = 0
BLAST of Cp4.1LG01g25900 vs. NCBI nr
Match: KAG6578363.1 (hypothetical protein SDJN03_22811, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 103 bits (257), Expect = 3.06e-26 Identity = 71/115 (61.74%), Postives = 74/115 (64.35%), Query Frame = 0
BLAST of Cp4.1LG01g25900 vs. NCBI nr
Match: EXC33380.1 (hypothetical protein L484_010790 [Morus notabilis]) HSP 1 Score: 50.1 bits (118), Expect = 4.60e-05 Identity = 42/103 (40.78%), Postives = 56/103 (54.37%), Query Frame = 0
BLAST of Cp4.1LG01g25900 vs. ExPASy TrEMBL
Match: A0A0A0LQT5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G406070 PE=4 SV=1) HSP 1 Score: 130 bits (326), Expect = 6.69e-37 Identity = 78/113 (69.03%), Postives = 86/113 (76.11%), Query Frame = 0
BLAST of Cp4.1LG01g25900 vs. ExPASy TrEMBL
Match: A0A5A7UMY1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1154G00160 PE=4 SV=1) HSP 1 Score: 125 bits (313), Expect = 6.37e-35 Identity = 77/114 (67.54%), Postives = 84/114 (73.68%), Query Frame = 0
BLAST of Cp4.1LG01g25900 vs. ExPASy TrEMBL
Match: W9SYV9 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_010790 PE=4 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 2.23e-05 Identity = 42/103 (40.78%), Postives = 56/103 (54.37%), Query Frame = 0
BLAST of Cp4.1LG01g25900 vs. ExPASy TrEMBL
Match: A0A059APA4 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_I01634 PE=4 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 1.95e-04 Identity = 35/91 (38.46%), Postives = 52/91 (57.14%), Query Frame = 0
BLAST of Cp4.1LG01g25900 vs. ExPASy TrEMBL
Match: A0A2P5FC89 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_089200 PE=4 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 5.57e-04 Identity = 23/33 (69.70%), Postives = 26/33 (78.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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