Cp4.1LG01g25840 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACAATCGAGTTACGATTGGCGAAGCTTTGCCTCGAGAGGAACATTCCGTACCTAGGGATTTGCAGAGGATCGCAGGTCCTCAATGTCGCATGCGGAGGTACGCTTTATCAGGACGTTGATAGTGAGATTCGGAAGAAGTGTCCGGGAGGGGAAAAAGTGGTTCACATGGATTACGATAATTACGATGGGCATAGGCATAGGGTTAATGTTGTGGAGAATACGCCATTGCATAATTGGTTCAGAGATTCATTGGATGAAAAGAAGATGGAGATTATGGTGAACAGTTATCATCATCAAGGAGTTAAGGTGTTGGCTCAGAGATTTGTGCCCATGGCTTTTGCTCCTGATGGATTGATTGAAGGGTTTTATGATCCAGATGCCTATAATCCTGAAGAGGGAAAGTTCATTATGGGACTTCAATTTCATCCTGAAAGAATGAGACGCCCTGATTCTGACGAATTTGATTATCCTGGATGCCCTGCCGCTTATCAGGTACCTTTTCACTCACCTTTTAATCAACTATAACTCTGTTTCTGTGGTTTCAAATATTCATCCAACCAAACAGAGCTTATCTAAAAGTGTCCTGTATCTAAAGATAAGGATTTGAAGTTTAGAATCAAAATAAAAAGATCTTAATATTTTTGTTTAAGTATTAAGGTTTGAATAACTTTATCTGGATCAAAATAAAATAAACACTAAAATAAGATTCGATTCTTTTTTAAGTGATGAGATTTAAGTGTTGATTATATAGGTTTGAATGTTATTTTGATTCATATTTGTTCTTTATGAAGTTCATCAGGTGTCTTATCTATCAAGTTGTGTTGTTCTATTAGAGGTTGTTTCTTTTAGTTCTAAAACCTTCTGTAAGAACTGTTTTATTGACCCAAATCTCAGATCGGTTTCTTAGCTTCTGTACATGAACTATTTAATTAACATGAATCTTACGTGCGTTTAAAAACTCTGACTCCAGGCCCACCCTCTTTCCTTTGACCCCTAAAGCCTTCTGTAAGAACTATTTAATTAACATGAATCTTACGTCCGTTTAAAAAGTTCTAAAGCCTTCTGTAAGAACTGTTTTATTGACCCAAATTTTTGCATCTAATTTTAGGAAACGCTTATGATTTAGACAGGAACCAAAGCATTGGTACCGTATCAAGTTATGATGTTTCTACAGCTTTTGAAACAGAAATGAAGTCAGTTCTTATGTCAAGTATTTTATATTATGAGAATGTTGATAATGGTAACTGGAGGTTAGCTGAAGTTGTTCATTTGGGATTTGGTGCAGCAATTTGTGAAGGCAGTGGTTGCATACCAAAAGAAGTTAAACAGCAGCACATTATCGGCACCCAAAAAGGCTTTAAAGCTGGACAACGAAATGGAGAAGAAAAGGAAGATCATAGTCCGAAGCTTCTCCCTTGCCAAGAACTTATACACGACCGGCCGCGACGCCCAGCTGGAGCGAGAGGCTGAGCTCGAAGTAGGAGCAGAGTTCCTAGAGGTATAATCAGAATCAAGTGTCAAACCTCAAATGCAGAAGCCTTATTATTAGATCACAAAGCCAACTGTTTTGAACTGTTTTGTTTTGTTTTGCTTTGATTTGTTTTTGCAGTCGAACACTGCTCTGAGCGTGCAGCAAAAGAATAGGCTGAAGCAAATGGGTGCAACAGTGAGAAATGGAGGGTCGTACATAGAGAAGCTGAAGGTAAATGAAGAGAGAGAAAGAACAGCAAAGAATGTGATGGGGAAGATGACAATAGAGCAATTGTCTGATCTCATGTCATTCTACCATATGATGGGTCAGATCTGCTCAGAAATTTTGGAGAGAAAGTTGAACGATATTGTGAAGTAAAAGCCAGCAGTTTGGCCTTTTGATCTGTCATTTTCTAAATTATCTTTTGCTGTTGGGGACTCATCAATTTCATTAAGGATCCACCACAAATTTATGTATCTCTCTCTAATTTATATTTTCTCTCTCTACAAAAGGTGGGTAATGGATTGAGGACCTCCAAATTTGTAACCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCATTGCTAATGGGTTGGAAATCATTATGTGAATTATATTGCAATTGTAAAGTTTGGGAACCCATGTTTTACTTTTCTATGCTGTTGACTTGTAAATACTGTAATTGGAACAGAAATGGACCACCC ACAATCGAGTTACGATTGGCGAAGCTTTGCCTCGAGAGGAACATTCCGTACCTAGGGATTTGCAGAGGATCGCAGGTCCTCAATGTCGCATGCGGAGGTACGCTTTATCAGGACGTTGATAGTGAGATTCGGAAGAAGTGTCCGGGAGGGGAAAAAGTGGTTCACATGGATTACGATAATTACGATGGGCATAGGCATAGGGTTAATGTTGTGGAGAATACGCCATTGCATAATTGGTTCAGAGATTCATTGGATGAAAAGAAGATGGAGATTATGGTGAACAGTTATCATCATCAAGGAGTTAAGGTGTTGGCTCAGAGATTTGTGCCCATGGCTTTTGCTCCTGATGGATTGATTGAAGGGTTTTATGATCCAGATGCCTATAATCCTGAAGAGGGAAAGTTCATTATGGGACTTCAATTTCATCCTGAAAGAATGAGACGCCCTGATTCTGACGAATTTGATTATCCTGGATGCCCTGCCGCTTATCAGCAATTTGTGAAGGCAGTGGTTGCATACCAAAAGAAGTTAAACAGCAGCACATTATCGGCACCCAAAAAGGCTTTAAAGCTGGACAACGAAATGGAGAAGAAAAGGAAGATCATAGTCCGAAGCTTCTCCCTTGCCAAGAACTTATACACGACCGGCCGCGACGCCCAGCTGGAGCGAGAGGCTGAGCTCGAAGTAGGAGCAGAGTTCCTAGAGTCGAACACTGCTCTGAGCGTGCAGCAAAAGAATAGGCTGAAGCAAATGGGTGCAACAGTGAGAAATGGAGGGTCGTACATAGAGAAGCTGAAGGTAAATGAAGAGAGAGAAAGAACAGCAAAGAATGTGATGGGGAAGATGACAATAGAGCAATTGTCTGATCTCATGTCATTCTACCATATGATGGGTCAGATCTGCTCAGAAATTTTGGAGAGAAAGTTGAACGATATTGTGAAGTAAAAGCCAGCAGTTTGGCCTTTTGATCTGTCATTTTCTAAATTATCTTTTGCTGTTGGGGACTCATCAATTTCATTAAGGATCCACCACAAATTTATGTATCTCTCTCTAATTTATATTTTCTCTCTCTACAAAAGGTGGGTAATGGATTGAGGACCTCCAAATTTGTAACCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCATTGCTAATGGGTTGGAAATCATTATGTGAATTATATTGCAATTGTAAAGTTTGGGAACCCATGTTTTACTTTTCTATGCTGTTGACTTGTAAATACTGTAATTGGAACAGAAATGGACCACCC ATGGATTACGATAATTACGATGGGCATAGGCATAGGGTTAATGTTGTGGAGAATACGCCATTGCATAATTGGTTCAGAGATTCATTGGATGAAAAGAAGATGGAGATTATGGTGAACAGTTATCATCATCAAGGAGTTAAGGTGTTGGCTCAGAGATTTGTGCCCATGGCTTTTGCTCCTGATGGATTGATTGAAGGGTTTTATGATCCAGATGCCTATAATCCTGAAGAGGGAAAGTTCATTATGGGACTTCAATTTCATCCTGAAAGAATGAGACGCCCTGATTCTGACGAATTTGATTATCCTGGATGCCCTGCCGCTTATCAGCAATTTGTGAAGGCAGTGGTTGCATACCAAAAGAAGTTAAACAGCAGCACATTATCGGCACCCAAAAAGGCTTTAAAGCTGGACAACGAAATGGAGAAGAAAAGGAAGATCATAGTCCGAAGCTTCTCCCTTGCCAAGAACTTATACACGACCGGCCGCGACGCCCAGCTGGAGCGAGAGGCTGAGCTCGAAGTAGGAGCAGAGTTCCTAGAGTCGAACACTGCTCTGAGCGTGCAGCAAAAGAATAGGCTGAAGCAAATGGGTGCAACAGTGAGAAATGGAGGGTCGTACATAGAGAAGCTGAAGGTAAATGAAGAGAGAGAAAGAACAGCAAAGAATGTGATGGGGAAGATGACAATAGAGCAATTGTCTGATCTCATGTCATTCTACCATATGATGGGTCAGATCTGCTCAGAAATTTTGGAGAGAAAGTTGAACGATATTGTGAAGTAA MDYDNYDGHRHRVNVVENTPLHNWFRDSLDEKKMEIMVNSYHHQGVKVLAQRFVPMAFAPDGLIEGFYDPDAYNPEEGKFIMGLQFHPERMRRPDSDEFDYPGCPAAYQQFVKAVVAYQKKLNSSTLSAPKKALKLDNEMEKKRKIIVRSFSLAKNLYTTGRDAQLEREAELEVGAEFLESNTALSVQQKNRLKQMGATVRNGGSYIEKLKVNEERERTAKNVMGKMTIEQLSDLMSFYHMMGQICSEILERKLNDIVK Homology
BLAST of Cp4.1LG01g25840 vs. ExPASy Swiss-Prot
Match: Q8H0Z4 (Putative glutamine amidotransferase GAT1_2.1 OS=Arabidopsis thaliana OX=3702 GN=GAT1_2.1 PE=2 SV=1) HSP 1 Score: 273.5 bits (698), Expect = 2.5e-72 Identity = 142/254 (55.91%), Postives = 179/254 (70.47%), Query Frame = 0
BLAST of Cp4.1LG01g25840 vs. ExPASy Swiss-Prot
Match: P49865 (Protein NtpR OS=Enterococcus hirae (strain ATCC 9790 / DSM 20160 / JCM 8729 / LMG 6399 / NBRC 3181 / NCIMB 6459 / NCDO 1258 / NCTC 12367 / WDCM 00089 / R) OX=768486 GN=ntpR PE=4 SV=2) HSP 1 Score: 53.1 bits (126), Expect = 5.3e-06 Identity = 32/94 (34.04%), Postives = 48/94 (51.06%), Query Frame = 0
BLAST of Cp4.1LG01g25840 vs. ExPASy Swiss-Prot
Match: Q9ZDC7 (Putative glutamine amidotransferase-like protein RP404 OS=Rickettsia prowazekii (strain Madrid E) OX=272947 GN=RP404 PE=4 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 2.9e-04 Identity = 26/79 (32.91%), Postives = 40/79 (50.63%), Query Frame = 0
BLAST of Cp4.1LG01g25840 vs. NCBI nr
Match: XP_023546336.1 (putative glutamine amidotransferase GAT1_2.1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 520 bits (1338), Expect = 1.47e-184 Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0
BLAST of Cp4.1LG01g25840 vs. NCBI nr
Match: XP_022990892.1 (putative glutamine amidotransferase GAT1_2.1 [Cucurbita maxima]) HSP 1 Score: 520 bits (1338), Expect = 2.59e-183 Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0
BLAST of Cp4.1LG01g25840 vs. NCBI nr
Match: XP_022923090.1 (putative glutamine amidotransferase GAT1_2.1 [Cucurbita moschata] >KAG6602698.1 putative glutamine amidotransferase, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 520 bits (1338), Expect = 2.59e-183 Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0
BLAST of Cp4.1LG01g25840 vs. NCBI nr
Match: KAG7033385.1 (ntpR, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 520 bits (1338), Expect = 3.09e-183 Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0
BLAST of Cp4.1LG01g25840 vs. NCBI nr
Match: XP_038885594.1 (putative glutamine amidotransferase GAT1_2.1 [Benincasa hispida]) HSP 1 Score: 491 bits (1265), Expect = 3.31e-172 Identity = 242/259 (93.44%), Postives = 250/259 (96.53%), Query Frame = 0
BLAST of Cp4.1LG01g25840 vs. ExPASy TrEMBL
Match: A0A6J1JK54 (putative glutamine amidotransferase GAT1_2.1 OS=Cucurbita maxima OX=3661 GN=LOC111487645 PE=4 SV=1) HSP 1 Score: 520 bits (1338), Expect = 1.25e-183 Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0
BLAST of Cp4.1LG01g25840 vs. ExPASy TrEMBL
Match: A0A6J1EAP4 (putative glutamine amidotransferase GAT1_2.1 OS=Cucurbita moschata OX=3662 GN=LOC111430861 PE=4 SV=1) HSP 1 Score: 520 bits (1338), Expect = 1.25e-183 Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0
BLAST of Cp4.1LG01g25840 vs. ExPASy TrEMBL
Match: A0A6J1BY61 (uncharacterized protein LOC111006657 OS=Momordica charantia OX=3673 GN=LOC111006657 PE=4 SV=1) HSP 1 Score: 489 bits (1259), Expect = 1.31e-171 Identity = 239/259 (92.28%), Postives = 251/259 (96.91%), Query Frame = 0
BLAST of Cp4.1LG01g25840 vs. ExPASy TrEMBL
Match: A0A5D3C5X1 (Putative glutamine amidotransferase PB2B2.05 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold453G001780 PE=4 SV=1) HSP 1 Score: 488 bits (1257), Expect = 2.64e-171 Identity = 240/259 (92.66%), Postives = 250/259 (96.53%), Query Frame = 0
BLAST of Cp4.1LG01g25840 vs. ExPASy TrEMBL
Match: A0A1S3B3T0 (uncharacterized protein LOC103485446 OS=Cucumis melo OX=3656 GN=LOC103485446 PE=4 SV=1) HSP 1 Score: 488 bits (1257), Expect = 2.64e-171 Identity = 240/259 (92.66%), Postives = 250/259 (96.53%), Query Frame = 0
BLAST of Cp4.1LG01g25840 vs. TAIR 10
Match: AT5G38200.1 (Class I glutamine amidotransferase-like superfamily protein ) HSP 1 Score: 388.3 bits (996), Expect = 4.9e-108 Identity = 191/255 (74.90%), Postives = 225/255 (88.24%), Query Frame = 0
BLAST of Cp4.1LG01g25840 vs. TAIR 10
Match: AT1G66860.1 (Class I glutamine amidotransferase-like superfamily protein ) HSP 1 Score: 371.3 bits (952), Expect = 6.3e-103 Identity = 182/256 (71.09%), Postives = 224/256 (87.50%), Query Frame = 0
BLAST of Cp4.1LG01g25840 vs. TAIR 10
Match: AT1G15040.1 (Class I glutamine amidotransferase-like superfamily protein ) HSP 1 Score: 273.5 bits (698), Expect = 1.8e-73 Identity = 142/254 (55.91%), Postives = 179/254 (70.47%), Query Frame = 0
BLAST of Cp4.1LG01g25840 vs. TAIR 10
Match: AT1G15040.2 (Class I glutamine amidotransferase-like superfamily protein ) HSP 1 Score: 202.6 bits (514), Expect = 3.8e-52 Identity = 99/157 (63.06%), Postives = 119/157 (75.80%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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