
Cp4.1LG01g25590 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCACGTCACAGATTCAGATTCTAAGGTATTCTCTTTGGTTACCCGGGTAAGCACCAAACTTCTGTGCCTCCACCGTCACCCACAGATTTTATACCCCTCTCTCCCCATGTTTTAATTCTAATATTTACTTAAAAATTTTAAGTTAATTTAAACTAATAGGAAGATTTAATGTGAATATTTAGGAAAAGAAAAAGGGGGAGTGTGGGAATTGGATTAAAGGTGATTAATTGATAGGACAGATTAAGATATGGTAATGATTTATGTGAGAGACATTTAAAGGGATGATTAAAGCCGAAGCCTAAGAGTGAGATTAAGAACACAAAAAGTATAATTTGTCTCCTTAATTCTCTACTTAACCAATGTTACTTCCCTTCCTTGACACAGGTTCATGCTGTTGGAATGAAGCTGACGCAACGGCGGTGGTAAATATGGTAATAAAAGTAAGGCACACAGTTAAGAAAGGTCGCATTTGGTTAGGTTTGTAACATATGGCATAAGGGTTGCACTGAAGGACAAGTGTCTCCAGCTACTGCCGCCTCCCTTTCCAGTTGTCTTCACATCTTCGACAGTTTCATCTCTCTCTCTTGATTTTGAACTGTCTCCCAAATCCACAATAACCCTCGATAAAGCTCAAGCTTCTCCTTAACATTCCCCCCTCACCCTCCTCCTTCTCTTCCTTCCCACCCTTCACTCTGTCCCTTTTTCCTTTGTAGGGTCCCCCGTCAACCCCCACTCCCACCGGTCTCTCTTCCCCTCATTATTAATCTTCCTCTCCCACCCTCTTCGTTTCCTCAACTATCGCCTCCATTCCCTCTCTCTCTGTCTCTTCCTCTCGCTTCCTCTCGCATGGCTGAGTCTCTAGCTGCTTCTGATTTGTGGCTTCCCTCTGGGAAAGAGAGTCTGAGTAAGACAGCTTCCTTCGAACCTCCTTGTTTGAGCTTCCCCTCTGAGTTTCCTTACGAGTTTGACTCGTTTGGTTCTAACTCTGACCTCAACTCGCCAGTGGAATCGGTTGTGAGCTCTACGGACTCAACTGGCGGTAGTAGTGACGACGATGAGTTTTTTGTGGGGTTGGCTCAGCAATTTGCATGGACGTCTCTCTGTGAAACTGAGAAATCCACATTTCCCTGCTTTAATCCCAACAAAATTGAGGTACCCTTTTCACCTAATGTTCTTCTCTTTCATTTTTTAGGTGTTTGGTTTAGTTTCTGACATGGGTTTTGCTTGTTTTTTTGGGGGGATTAGAAGAAGCATGTGAAAGCTGGTTCTCCTCAGTCGACTTTGAGTGGCATAGACGCCTGGTTTCGCCCTGAAGGTCCTTCGTCTCTGCTAAAATCGCCTCCCATGGCGGTTTTTGGGGCTGATAACGATGCTAGAGTCCTCATACATGCAGCTTCAAGGGAGGCTGCGAGGTTAAAGATGTACGGCCAAACGACCCCATATCATAACAATGGATTTATGGGCGCTCGATCTTCCATTCCGGTTAAATCCACGAGTAATGTGGAGTATGGGCTGTTCTCGACTCAGAACTGTGCTAGGAATCTGGCATTTTCCGCGCAGGTCAGTTATTTAAAATTTCCGAACTCTTAAGTTGAGTCTTTGAGAACAGAGTATTTTAGTAGTTAGGTTCTCAGTTATTCTTATGGCCTGCCTTACATATCGGAGATTATTGGGATTTCTGGTTCCACAGGTTCAGAAAGTGGGACAGGATCTAGTACTACAGGCTCTTCGTGCCTCTGCTTGGGAAAGACAAGCCAAAGTCGGTTGGTCAGCCCAGCCTCACCGGAAGCCGGAGATTCAAAACAGAGAGAGAAACATCGTTGATGTTACCAGCCGGTGCAGTGGAGGCACCGGCAGTTTGTACCACTCTGCATGGATTCCGCCGCATCAAAATCAGCATCCACCACCCAATGCCTCCGCCATGCGTTGTATTCATCCCGCTGGCGGATCTGCCATCAAAAGGGCTTCCTCTGGAACCGGCGTTTTCCTTCCTCGCAGACATGTAAACCCTTCCGACTGCCGCCATAAACAAGGTATTTTGACATAAAACCATCTCAAAACGTCCCTTTGTCTAAAAGACACAAGGATTATCTTTCTCTAACCTTCGTCGTTTATGATTAATTAGGTAGCCCAGCCATTAATTTTACAGAGGAAATGAAAAGCTCCATCCAAGCCCCATTTAACGGCTGGCTGTCATCCAGCTTCGGTAAGCAAGTTTCTCCAACAATTACCCCCTAATTTGTCATCGTTTTAAAGCAGTTCTTTAAATGGGAGTTTCACAAATTACAGATTCCAGAAAGAATCCCCTTCTGCCACAGCCAAGGACAATCAGAGCAGAGGGAGCCGTAAAACATGAACTTCACCTACCTCAAGAATGGACATACTGATGAAGAACGAAGCCAGAGAACACTGAATCCATTTGTATTTGCAGGTGTTGGATAAAGAATCCATTAAAGTAGCCAGAACAGTATTGATTTATGCAAAGGGTGTTCTTAGTTAGATTGAAAATGGCAGAGCATAGGTTTAGAATAAAGAAGGAAGGGTAGCAGTGGGTGAAGGAAGAAGAAGAAGATGAAGATGAAGAGGTTGAGTAGAAAAGGACAGTACAGAGATATGTTGTGTGTCCTACTAAAATATCTGTAATTTTGTGCCATAGTCATTTTAGATATATGTTTTTTTTGGGTGAGGGCAAAATTATAAAAAATCCCTCTCTGCCTTGTAATTTTGTTCAATTATTAATCATATGCTTTAATAAATAATAACATATATTTGATGTGTTTAATTTTCATTTTCAGTATGAAAAAAATTCAAA CCACGTCACAGATTCAGATTCTAAGGTATTCTCTTTGGTTACCCGGGTTCATGCTGTTGGAATGAAGCTGACGCAACGGCGGTGGTAAATATGGTAATAAAAGTAAGGCACACAGTTAAGAAAGGTCGCATTTGGTTAGGTTTGTAACATATGGCATAAGGGTTGCACTGAAGGACAAGTGTCTCCAGCTACTGCCGCCTCCCTTTCCAGTTGTCTTCACATCTTCGACAGTTTCATCTCTCTCTCTTGATTTTGAACTGTCTCCCAAATCCACAATAACCCTCGATAAAGCTCAAGCTTCTCCTTAACATTCCCCCCTCACCCTCCTCCTTCTCTTCCTTCCCACCCTTCACTCTGTCCCTTTTTCCTTTGTAGGGTCCCCCGTCAACCCCCACTCCCACCGGTCTCTCTTCCCCTCATTATTAATCTTCCTCTCCCACCCTCTTCGTTTCCTCAACTATCGCCTCCATTCCCTCTCTCTCTGTCTCTTCCTCTCGCTTCCTCTCGCATGGCTGAGTCTCTAGCTGCTTCTGATTTGTGGCTTCCCTCTGGGAAAGAGAGTCTGAGTAAGACAGCTTCCTTCGAACCTCCTTGTTTGAGCTTCCCCTCTGAGTTTCCTTACGAGTTTGACTCGTTTGGTTCTAACTCTGACCTCAACTCGCCAGTGGAATCGGTTGTGAGCTCTACGGACTCAACTGGCGGTAGTAGTGACGACGATGAGTTTTTTGTGGGGTTGGCTCAGCAATTTGCATGGACGTCTCTCTGTGAAACTGAGAAATCCACATTTCCCTGCTTTAATCCCAACAAAATTGAGAAGAAGCATGTGAAAGCTGGTTCTCCTCAGTCGACTTTGAGTGGCATAGACGCCTGGTTTCGCCCTGAAGGTCCTTCGTCTCTGCTAAAATCGCCTCCCATGGCGGTTTTTGGGGCTGATAACGATGCTAGAGTCCTCATACATGCAGCTTCAAGGGAGGCTGCGAGGTTAAAGATGTACGGCCAAACGACCCCATATCATAACAATGGATTTATGGGCGCTCGATCTTCCATTCCGGTTAAATCCACGAGTAATGTGGAGTATGGGCTGTTCTCGACTCAGAACTGTGCTAGGAATCTGGCATTTTCCGCGCAGGTTCAGAAAGTGGGACAGGATCTAGTACTACAGGCTCTTCGTGCCTCTGCTTGGGAAAGACAAGCCAAAGTCGGTTGGTCAGCCCAGCCTCACCGGAAGCCGGAGATTCAAAACAGAGAGAGAAACATCGTTGATGTTACCAGCCGGTGCAGTGGAGGCACCGGCAGTTTGTACCACTCTGCATGGATTCCGCCGCATCAAAATCAGCATCCACCACCCAATGCCTCCGCCATGCGTTGTATTCATCCCGCTGGCGGATCTGCCATCAAAAGGGCTTCCTCTGGAACCGGCGTTTTCCTTCCTCGCAGACATGTAAACCCTTCCGACTGCCGCCATAAACAAGGTAGCCCAGCCATTAATTTTACAGAGGAAATGAAAAGCTCCATCCAAGCCCCATTTAACGGCTGGCTGTCATCCAGCTTCGATTCCAGAAAGAATCCCCTTCTGCCACAGCCAAGGACAATCAGAGCAGAGGGAGCCGTAAAACATGAACTTCACCTACCTCAAGAATGGACATACTGATGAAGAACGAAGCCAGAGAACACTGAATCCATTTGTATTTGCAGGTGTTGGATAAAGAATCCATTAAAGTAGCCAGAACAGTATTGATTTATGCAAAGGGTGTTCTTAGTTAGATTGAAAATGGCAGAGCATAGGTTTAGAATAAAGAAGGAAGGGTAGCAGTGGGTGAAGGAAGAAGAAGAAGATGAAGATGAAGAGGTTGAGTAGAAAAGGACAGTACAGAGATATGTTGTGTGTCCTACTAAAATATCTGTAATTTTGTGCCATAGTCATTTTAGATATATGTTTTTTTTGGGTGAGGGCAAAATTATAAAAAATCCCTCTCTGCCTTGTAATTTTGTTCAATTATTAATCATATGCTTTAATAAATAATAACATATATTTGATGTGTTTAATTTTCATTTTCAGTATGAAAAAAATTCAAA ATGGCTGAGTCTCTAGCTGCTTCTGATTTGTGGCTTCCCTCTGGGAAAGAGAGTCTGAGTAAGACAGCTTCCTTCGAACCTCCTTGTTTGAGCTTCCCCTCTGAGTTTCCTTACGAGTTTGACTCGTTTGGTTCTAACTCTGACCTCAACTCGCCAGTGGAATCGGTTGTGAGCTCTACGGACTCAACTGGCGGTAGTAGTGACGACGATGAGTTTTTTGTGGGGTTGGCTCAGCAATTTGCATGGACGTCTCTCTGTGAAACTGAGAAATCCACATTTCCCTGCTTTAATCCCAACAAAATTGAGAAGAAGCATGTGAAAGCTGGTTCTCCTCAGTCGACTTTGAGTGGCATAGACGCCTGGTTTCGCCCTGAAGGTCCTTCGTCTCTGCTAAAATCGCCTCCCATGGCGGTTTTTGGGGCTGATAACGATGCTAGAGTCCTCATACATGCAGCTTCAAGGGAGGCTGCGAGGTTAAAGATGTACGGCCAAACGACCCCATATCATAACAATGGATTTATGGGCGCTCGATCTTCCATTCCGGTTAAATCCACGAGTAATGTGGAGTATGGGCTGTTCTCGACTCAGAACTGTGCTAGGAATCTGGCATTTTCCGCGCAGGTTCAGAAAGTGGGACAGGATCTAGTACTACAGGCTCTTCGTGCCTCTGCTTGGGAAAGACAAGCCAAAGTCGGTTGGTCAGCCCAGCCTCACCGGAAGCCGGAGATTCAAAACAGAGAGAGAAACATCGTTGATGTTACCAGCCGGTGCAGTGGAGGCACCGGCAGTTTGTACCACTCTGCATGGATTCCGCCGCATCAAAATCAGCATCCACCACCCAATGCCTCCGCCATGCGTTGTATTCATCCCGCTGGCGGATCTGCCATCAAAAGGGCTTCCTCTGGAACCGGCGTTTTCCTTCCTCGCAGACATGTAAACCCTTCCGACTGCCGCCATAAACAAGGTAGCCCAGCCATTAATTTTACAGAGGAAATGAAAAGCTCCATCCAAGCCCCATTTAACGGCTGGCTGTCATCCAGCTTCGATTCCAGAAAGAATCCCCTTCTGCCACAGCCAAGGACAATCAGAGCAGAGGGAGCCGTAAAACATGAACTTCACCTACCTCAAGAATGGACATACTGA MAESLAASDLWLPSGKESLSKTASFEPPCLSFPSEFPYEFDSFGSNSDLNSPVESVVSSTDSTGGSSDDDEFFVGLAQQFAWTSLCETEKSTFPCFNPNKIEKKHVKAGSPQSTLSGIDAWFRPEGPSSLLKSPPMAVFGADNDARVLIHAASREAARLKMYGQTTPYHNNGFMGARSSIPVKSTSNVEYGLFSTQNCARNLAFSAQVQKVGQDLVLQALRASAWERQAKVGWSAQPHRKPEIQNRERNIVDVTSRCSGGTGSLYHSAWIPPHQNQHPPPNASAMRCIHPAGGSAIKRASSGTGVFLPRRHVNPSDCRHKQGSPAINFTEEMKSSIQAPFNGWLSSSFDSRKNPLLPQPRTIRAEGAVKHELHLPQEWTY Homology
BLAST of Cp4.1LG01g25590 vs. NCBI nr
Match: XP_023515357.1 (uncharacterized protein LOC111779387 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 780 bits (2013), Expect = 1.02e-284 Identity = 380/380 (100.00%), Postives = 380/380 (100.00%), Query Frame = 0
BLAST of Cp4.1LG01g25590 vs. NCBI nr
Match: XP_022957513.1 (uncharacterized protein LOC111458886 [Cucurbita moschata]) HSP 1 Score: 743 bits (1918), Expect = 3.08e-270 Identity = 363/380 (95.53%), Postives = 369/380 (97.11%), Query Frame = 0
BLAST of Cp4.1LG01g25590 vs. NCBI nr
Match: KAG6602637.1 (hypothetical protein SDJN03_07870, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 741 bits (1913), Expect = 1.85e-269 Identity = 364/381 (95.54%), Postives = 369/381 (96.85%), Query Frame = 0
BLAST of Cp4.1LG01g25590 vs. NCBI nr
Match: XP_022990001.1 (uncharacterized protein LOC111487028 isoform X1 [Cucurbita maxima]) HSP 1 Score: 721 bits (1860), Expect = 2.30e-261 Identity = 358/382 (93.72%), Postives = 364/382 (95.29%), Query Frame = 0
BLAST of Cp4.1LG01g25590 vs. NCBI nr
Match: XP_022990003.1 (uncharacterized protein LOC111487028 isoform X2 [Cucurbita maxima]) HSP 1 Score: 714 bits (1843), Expect = 8.64e-259 Identity = 357/382 (93.46%), Postives = 363/382 (95.03%), Query Frame = 0
BLAST of Cp4.1LG01g25590 vs. ExPASy TrEMBL
Match: A0A6J1H0F4 (uncharacterized protein LOC111458886 OS=Cucurbita moschata OX=3662 GN=LOC111458886 PE=4 SV=1) HSP 1 Score: 743 bits (1918), Expect = 1.49e-270 Identity = 363/380 (95.53%), Postives = 369/380 (97.11%), Query Frame = 0
BLAST of Cp4.1LG01g25590 vs. ExPASy TrEMBL
Match: A0A6J1JLQ9 (uncharacterized protein LOC111487028 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487028 PE=4 SV=1) HSP 1 Score: 721 bits (1860), Expect = 1.11e-261 Identity = 358/382 (93.72%), Postives = 364/382 (95.29%), Query Frame = 0
BLAST of Cp4.1LG01g25590 vs. ExPASy TrEMBL
Match: A0A6J1JS02 (uncharacterized protein LOC111487028 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487028 PE=4 SV=1) HSP 1 Score: 714 bits (1843), Expect = 4.18e-259 Identity = 357/382 (93.46%), Postives = 363/382 (95.03%), Query Frame = 0
BLAST of Cp4.1LG01g25590 vs. ExPASy TrEMBL
Match: A0A6J1BYQ6 (uncharacterized protein LOC111006679 OS=Momordica charantia OX=3673 GN=LOC111006679 PE=4 SV=1) HSP 1 Score: 539 bits (1388), Expect = 6.52e-190 Identity = 277/389 (71.21%), Postives = 312/389 (80.21%), Query Frame = 0
BLAST of Cp4.1LG01g25590 vs. ExPASy TrEMBL
Match: A0A5A7TJ83 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G001390 PE=4 SV=1) HSP 1 Score: 484 bits (1247), Expect = 1.02e-168 Identity = 254/366 (69.40%), Postives = 285/366 (77.87%), Query Frame = 0
BLAST of Cp4.1LG01g25590 vs. TAIR 10
Match: AT2G39870.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55690.1); Has 73 Blast hits to 71 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 69; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 91.3 bits (225), Expect = 1.8e-18 Identity = 94/305 (30.82%), Postives = 136/305 (44.59%), Query Frame = 0
BLAST of Cp4.1LG01g25590 vs. TAIR 10
Match: AT3G55690.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G39870.1); Has 76 Blast hits to 69 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 3; Plants - 69; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 73.2 bits (178), Expect = 5.2e-13 Identity = 103/387 (26.61%), Postives = 154/387 (39.79%), Query Frame = 0
BLAST of Cp4.1LG01g25590 vs. TAIR 10
Match: AT3G54000.1 (CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP022260 (InterPro:IPR016802); Has 94 Blast hits to 94 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 47.8 bits (112), Expect = 2.3e-05 Identity = 97/377 (25.73%), Postives = 143/377 (37.93%), Query Frame = 0
BLAST of Cp4.1LG01g25590 vs. TAIR 10
Match: AT5G59050.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G54000.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 45.4 bits (106), Expect = 1.2e-04 Identity = 53/173 (30.64%), Postives = 66/173 (38.15%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|