Cp4.1LG01g25570 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g25570
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Mitochondrial glycoprotein
Location	Cp4.1LG01: 20811171 .. 20812404 (-)
RNA-Seq Expression	Cp4.1LG01g25570
Synteny	Cp4.1LG01g25570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAATGGCTATTGCGTCCATTATCAGAAAATCCGCCTCCTCTCTTTGCCCCTTGGCAGGTCGTCTCGTTCGCAGCCAACGAGTTTACAGTACTTCCATCTTCAATGCCTTGAACAATCACTCGAATTTCTATTGCCCGCCGCCGTTGGGTACCACGTTTAGCTCTTTCCGAGATTTTTCGTCATCAAAGCGCCCAAGTTCTGACGAGGCTCTCATACGAGTGATTGAGTCTGAGGTCAAATGCGCCTCGGAAACTGACGATCACGATCGGGTGAGTTTTGCTTTTTCTTCATCACCTAACCCAATTGGGTAATTATTGCTGAGATACATAGACAATTATACTTTCAATTAGTCTGAGAAAGAATCGCTCTGTTTACCAGTAGAATCAGTCGTAAAAATTACCTGCGATTACTCTGAAATATGAAGCTCCATGAGATATTACTGGCTTTTCATAGTGTCTGCACATTACTTGTCTGAGCACTGCTTCATCTGTAGTGGAAGTTGTATAATTTTCAACATGATTTGGAGGGGATTCCTTTCAGCGTGATTGATAAATGAGTCTGATAGGTCTGATTGTCAAACTGTAAGCATAAATCTATCGCTTCAGTAAATGGTGGTTATGATAATACATTCTTGATCTGATAGGTTGAGGAAGTGCCCAAAGGATTCCCATTTGAGATTCAAGATAACCCTGGCTTGCAAACTATTACTTTGAAGAGATCATATCAAGATGAAGTCATTAGTGTTGAAGTTCACATGCCTGATCTGGTTACTGGTCGAACTATTAACGCCAATGACGATGACGGTGACGATGATGGTGGTAATAAGGGAAATCAGTCTTGTATCCCATTGATGGTTAGTGTCTCAAAGAAGAATGGACCTTCCCTAGAGTTTAGTTGCAGCGCTTACCCTGATGACATTTCCATAGAGAGCTTGATAGTTAAACATCCAGAGCATTCTGAGGATCAAATTGCTTATGAAGGCCCTGATTTTCAGTAAGTATTTACATACATCTCAGTTCAGTTCTTCTAGCTTTGTTAGAATATGATGATCATATCTGCACTTTTTCTTTTCAGTGATCTGGACGAGAACCTTCAGAAGGCCTTCCACAAGTATCTGGAGATTAGAGGTATTAAACCGAGCACAACAATCTTCTTGCATGAGTACATGATCAACAAAGACAGCAAGGAGTTTCTGCTATGGCTGACGAAACTCAAGAACTTTGTTGAAGCA

mRNA sequence

AAAAAATGGCTATTGCGTCCATTATCAGAAAATCCGCCTCCTCTCTTTGCCCCTTGGCAGGTCGTCTCGTTCGCAGCCAACGAGTTTACAGTACTTCCATCTTCAATGCCTTGAACAATCACTCGAATTTCTATTGCCCGCCGCCGTTGGGTACCACGTTTAGCTCTTTCCGAGATTTTTCGTCATCAAAGCGCCCAAGTTCTGACGAGGCTCTCATACGAGTGATTGAGTCTGAGGTCAAATGCGCCTCGGAAACTGACGATCACGATCGGGTTGAGGAAGTGCCCAAAGGATTCCCATTTGAGATTCAAGATAACCCTGGCTTGCAAACTATTACTTTGAAGAGATCATATCAAGATGAAAGCTTGATAGTTAAACATCCAGAGCATTCTGAGGATCAAATTGCTTATGAAGGCCCTGATTTTCATGATCTGGACGAGAACCTTCAGAAGGCCTTCCACAAGTATCTGGAGATTAGAGGTATTAAACCGAGCACAACAATCTTCTTGCATGAGTACATGATCAACAAAGACAGCAAGGAGTTTCTGCTATGGCTGACGAAACTCAAGAACTTTGTTGAAGCA

Coding sequence (CDS)

ATGGCTATTGCGTCCATTATCAGAAAATCCGCCTCCTCTCTTTGCCCCTTGGCAGGTCGTCTCGTTCGCAGCCAACGAGTTTACAGTACTTCCATCTTCAATGCCTTGAACAATCACTCGAATTTCTATTGCCCGCCGCCGTTGGGTACCACGTTTAGCTCTTTCCGAGATTTTTCGTCATCAAAGCGCCCAAGTTCTGACGAGGCTCTCATACGAGTGATTGAGTCTGAGGTCAAATGCGCCTCGGAAACTGACGATCACGATCGGGTTGAGGAAGTGCCCAAAGGATTCCCATTTGAGATTCAAGATAACCCTGGCTTGCAAACTATTACTTTGAAGAGATCATATCAAGATGAAAGCTTGATAGTTAAACATCCAGAGCATTCTGAGGATCAAATTGCTTATGAAGGCCCTGATTTTCATGATCTGGACGAGAACCTTCAGAAGGCCTTCCACAAGTATCTGGAGATTAGAGGTATTAAACCGAGCACAACAATCTTCTTGCATGAGTACATGATCAACAAAGACAGCAAGGAGTTTCTGCTATGGCTGACGAAACTCAAGAACTTTGTTGAAGCA

Protein sequence

MAIASIIRKSASSLCPLAGRLVRSQRVYSTSIFNALNNHSNFYCPPPLGTTFSSFRDFSSSKRPSSDEALIRVIESEVKCASETDDHDRVEEVPKGFPFEIQDNPGLQTITLKRSYQDESLIVKHPEHSEDQIAYEGPDFHDLDENLQKAFHKYLEIRGIKPSTTIFLHEYMINKDSKEFLLWLTKLKNFVEA

Homology

[Close]

BLAST of Cp4.1LG01g25570 vs. ExPASy Swiss-Prot
Match: Q8W487 (Uncharacterized protein At2g39795, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g39795 PE=1 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.8e-27
Identity = 93/256 (36.33%), Postives = 124/256 (48.44%), Query Frame = 0


Query: 1   MAIA-SIIRKSASSLCPLAGRLVRSQRVYSTSIFNALNNHSNFYCPPPLGTTFSSFRDFS 60
           MA+A  ++R+SAS    + G  VR       SI    N  S    P  +    S   ++S
Sbjct: 1   MALAWCVVRRSASKFASVYGGRVR-------SISAVANRASLARNPSSIRPFVSRALNYS 60

Query: 61  SS-KRPSSDEALIRVIESEVKCASETDDHDRVEEV-PKGFPFEIQDNPGLQTITLKRSYQ 120
           ++  R SS++ LIRVI+SE+  A ++D+ D  EE+ P  FPF I+D PG Q +TL R Y 
Sbjct: 61  TAIDRISSEQTLIRVIDSEINSALQSDNIDSDEEMTPGSFPFRIEDKPGNQNVTLTRDYN 120

Query: 121 DE---------------------------------------------------------- 180
            E                                                          
Sbjct: 121 GEHIKVVVSMPSLVSDENDDDDDDDEGPSNESSIPLVVTVTKKSGLTLEFSCMAFPDEIA 180

Query: 181 --SLIVKHPEHS-EDQIAYEGPDFHDLDENLQKAFHKYLEIRGIKPSTTIFLHEYMINKD 193
             +L VKHP  S EDQ+A EGPDF DLDENL+K F+K+LEIRG+K STT FLHEYM  K 
Sbjct: 181 IDALSVKHPGDSLEDQLANEGPDFEDLDENLKKTFYKFLEIRGVKASTTNFLHEYMTRKV 240

[Close]

BLAST of Cp4.1LG01g25570 vs. ExPASy Swiss-Prot
Match: O22288 (Uncharacterized protein At2g39790, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g39790 PE=3 SV=2)

HSP 1 Score: 82.0 bits (201), Expect = 8.0e-15
Identity = 75/248 (30.24%), Postives = 109/248 (43.95%), Query Frame = 0


Query: 1   MAIASIIRKSASSLCPLAGRLVRSQRVYSTSIFNALNNHSNFYCPPPLGTTFS-SFRDFS 60
           MA A  +R+SAS L    G+        + SI   +N  S    P PL    S  F    
Sbjct: 1   MAFAWCVRRSASKLASACGQ--------ARSISAVVNRPSLALNPSPLSPFVSRGFLYTM 60

Query: 61  SSKRPSSDEALIRVIESEVKCASETDDHDRVEEV-PKGFPFEIQDNPGLQTITLKRSYQD 120
           +  + SS++ L  VI+SE+  A +TDD +  EE+ P  FP +I+D PG Q++TL   Y D
Sbjct: 61  AVDKLSSEQTLHLVIDSELNSALQTDDPNLNEEMAPGSFPLKIRDKPGDQSVTLTAYYND 120

Query: 121 ESLIVK--HPEHSEDQIAYEGPD------------------------------------- 180
           E + V    P   +D I   GP+                                     
Sbjct: 121 ERIHVDVGMPYLGDDVIDVFGPNNDELSFPLVVTVIKKNGVSIEFTCQAYADYIDLTDLT 180

Query: 181 ---------------FHDLDENLQKAFHKYLEIRGIKPSTTIFLHEYMINKDSKEFLLWL 193
                          F +LD+NL+KAFH+YL  R +  + T  LH+YM++K  +E+LLWL
Sbjct: 181 VHDYQYQMGETDWPRFKNLDDNLKKAFHRYLATR-LDANITKLLHKYMVSKIKREYLLWL 239

[Close]

BLAST of Cp4.1LG01g25570 vs. ExPASy Swiss-Prot
Match: P40513 (Mitochondrial acidic protein MAM33 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MAM33 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.0e-06
Identity = 23/59 (38.98%), Postives = 35/59 (59.32%), Query Frame = 0


Query: 132 QIAYEGPDFHDLDENLQKAFHKYLEIRGIKPSTTIFLHEYMINKDSKEFLLWLTKLKNF 191
           ++ Y GP F +LDE LQ++   YLE RG+      F+  Y   K++ E++ WL K+K F
Sbjct: 206 ELVYHGPPFSNLDEELQESLEAYLESRGVNEELASFISAYSEFKENNEYISWLEKMKKF 264

[Close]

BLAST of Cp4.1LG01g25570 vs. ExPASy Swiss-Prot
Match: O94675 (Mitochondrial acidic protein mam33 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC776.07 PE=3 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.5e-05
Identity = 23/58 (39.66%), Postives = 35/58 (60.34%), Query Frame = 0


Query: 135 YEGPDFHDLDENLQKAFHKYLEIRGIKPSTTIFLHEYMINKDSKEFLLWLTKLKNFVE 193
           Y GP F +LD  LQ  FH YLE R I  S + F+  + + K+ KE++ WL  ++ F++
Sbjct: 212 YLGPSFKELDPELQDLFHSYLEERKIDESLSSFIVSFGLTKELKEYINWLESVRQFLK 269

[Close]

BLAST of Cp4.1LG01g25570 vs. NCBI nr
Match: XP_023518233.1 (uncharacterized protein At2g39795, mitochondrial-like [Cucurbita pepo subsp. pepo] >XP_023518241.1 uncharacterized protein At2g39795, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 357 bits (917), Expect = 6.30e-123
Identity = 193/258 (74.81%), Postives = 193/258 (74.81%), Query Frame = 0


Query: 1   MAIASIIRKSASSLCPLAGRLVRSQRVYSTSIFNALNNHSNFYCPPPLGTTFSSFRDFSS 60
           MAIASIIRKSASSLCPLAGRLVRSQRVYSTSIFNALNNHSNFYCPPPLGTTFSSFRDFSS
Sbjct: 1   MAIASIIRKSASSLCPLAGRLVRSQRVYSTSIFNALNNHSNFYCPPPLGTTFSSFRDFSS 60

Query: 61  SKRPSSDEALIRVIESEVKCASETDDHDRVEEVPKGFPFEIQDNPGLQTITLKRSYQDE- 120
           SKRPSSDEALIRVIESEVKCASETDDHDRVEEVPKGFPFEIQDNPGLQTITLKRSYQDE 
Sbjct: 61  SKRPSSDEALIRVIESEVKCASETDDHDRVEEVPKGFPFEIQDNPGLQTITLKRSYQDEV 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 ISVEVHMPDLVTGRTINANDDDGDDDGGNKGNQSCIPLMVSVSKKNGPSLEFSCSAYPDD 180

Query: 181 ----SLIVKHPEHSEDQIAYEGPDFHDLDENLQKAFHKYLEIRGIKPSTTIFLHEYMINK 193
               SLIVKHPEHSEDQIAYEGPDFHDLDENLQKAFHKYLEIRGIKPSTTIFLHEYMINK
Sbjct: 181 ISIESLIVKHPEHSEDQIAYEGPDFHDLDENLQKAFHKYLEIRGIKPSTTIFLHEYMINK 240

[Close]

BLAST of Cp4.1LG01g25570 vs. NCBI nr
Match: XP_022990917.1 (uncharacterized protein At2g39795, mitochondrial-like [Cucurbita maxima] >XP_022990918.1 uncharacterized protein At2g39795, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 354 bits (909), Expect = 1.04e-121
Identity = 192/258 (74.42%), Postives = 192/258 (74.42%), Query Frame = 0


Query: 1   MAIASIIRKSASSLCPLAGRLVRSQRVYSTSIFNALNNHSNFYCPPPLGTTFSSFRDFSS 60
           MAIASIIRKSASSLCPLAGRLVRSQRVYSTSIFNALNNHSNFYCPPPLGTT SSFRDFSS
Sbjct: 1   MAIASIIRKSASSLCPLAGRLVRSQRVYSTSIFNALNNHSNFYCPPPLGTTCSSFRDFSS 60

Query: 61  SKRPSSDEALIRVIESEVKCASETDDHDRVEEVPKGFPFEIQDNPGLQTITLKRSYQDE- 120
           SKRPSSDEALIRVIESEVKCASETDDHDRVEEVPKGFPFEIQDNPGLQTITLKRSYQDE 
Sbjct: 61  SKRPSSDEALIRVIESEVKCASETDDHDRVEEVPKGFPFEIQDNPGLQTITLKRSYQDEV 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 INVEVHMPDLVTGRTINANDDDGDDDGGNKGNQSCIPLIVSVSKKNGPSLEFSCSAYPDE 180

Query: 181 ----SLIVKHPEHSEDQIAYEGPDFHDLDENLQKAFHKYLEIRGIKPSTTIFLHEYMINK 193
               SLIVKHPEHSEDQIAYEGPDFHDLDENLQKAFHKYLEIRGIKPSTTIFLHEYMINK
Sbjct: 181 ISIESLIVKHPEHSEDQIAYEGPDFHDLDENLQKAFHKYLEIRGIKPSTTIFLHEYMINK 240

[Close]

BLAST of Cp4.1LG01g25570 vs. NCBI nr
Match: XP_022954962.1 (uncharacterized protein At2g39795, mitochondrial-like [Cucurbita moschata] >XP_022954971.1 uncharacterized protein At2g39795, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 353 bits (907), Expect = 2.10e-121
Identity = 190/258 (73.64%), Postives = 191/258 (74.03%), Query Frame = 0


Query: 1   MAIASIIRKSASSLCPLAGRLVRSQRVYSTSIFNALNNHSNFYCPPPLGTTFSSFRDFSS 60
           MAIASIIRKSASSLCPLAGRL R QRVYSTS+FNALNNHSNFYCPPPLGTTFSSFRDFSS
Sbjct: 1   MAIASIIRKSASSLCPLAGRLFRGQRVYSTSVFNALNNHSNFYCPPPLGTTFSSFRDFSS 60

Query: 61  SKRPSSDEALIRVIESEVKCASETDDHDRVEEVPKGFPFEIQDNPGLQTITLKRSYQDE- 120
           SKRPSSDEALIRVIESEVKCASETDDHDRVEEVPKGFPFEIQDNPGLQTITLKRSYQDE 
Sbjct: 61  SKRPSSDEALIRVIESEVKCASETDDHDRVEEVPKGFPFEIQDNPGLQTITLKRSYQDEV 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 INVEVHMPDLVTGRTINANDVDGDDDGGNKGNQSCIPLMVSVSKKNGPSLEFSCSAYPDD 180

Query: 181 ----SLIVKHPEHSEDQIAYEGPDFHDLDENLQKAFHKYLEIRGIKPSTTIFLHEYMINK 193
               SLIVKHPEHSEDQIAYEGPDFHDLDENLQKAFHKYLEIRGIKPSTTIFLHEYMINK
Sbjct: 181 ISIESLIVKHPEHSEDQIAYEGPDFHDLDENLQKAFHKYLEIRGIKPSTTIFLHEYMINK 240

[Close]

BLAST of Cp4.1LG01g25570 vs. NCBI nr
Match: KAG7033332.1 (putative protein, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 348 bits (893), Expect = 2.84e-119
Identity = 189/258 (73.26%), Postives = 189/258 (73.26%), Query Frame = 0


Query: 1   MAIASIIRKSASSLCPLAGRLVRSQRVYSTSIFNALNNHSNFYCPPPLGTTFSSFRDFSS 60
           MAIASIIRKSASSLCPLAGRL R QRVYSTSIFNALNNHSNFYCP PLGTT SSFRDFSS
Sbjct: 1   MAIASIIRKSASSLCPLAGRLFRGQRVYSTSIFNALNNHSNFYCPRPLGTTLSSFRDFSS 60

Query: 61  SKRPSSDEALIRVIESEVKCASETDDHDRVEEVPKGFPFEIQDNPGLQTITLKRSYQDE- 120
           SKRPSSDEALIRVIESEVKCASETDDHDRVEEVPKGFPFEIQDNPGLQTITLKRSYQDE 
Sbjct: 61  SKRPSSDEALIRVIESEVKCASETDDHDRVEEVPKGFPFEIQDNPGLQTITLKRSYQDEV 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 ITVEVHMPDLVTGRTINANDDDGDDDGGNKGNQSCIPLIVSVSKKNGPSLEFSCSAYPEE 180

Query: 181 ----SLIVKHPEHSEDQIAYEGPDFHDLDENLQKAFHKYLEIRGIKPSTTIFLHEYMINK 193
               SLIVKHPEHSEDQIAYEGPDFHDLDENLQKAFHKYLEIRGIKPSTTIFLHEYMINK
Sbjct: 181 ISIESLIVKHPEHSEDQIAYEGPDFHDLDENLQKAFHKYLEIRGIKPSTTIFLHEYMINK 240

[Close]

BLAST of Cp4.1LG01g25570 vs. NCBI nr
Match: KAG6602646.1 (putative protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 345 bits (885), Expect = 4.70e-118
Identity = 188/258 (72.87%), Postives = 188/258 (72.87%), Query Frame = 0


Query: 1   MAIASIIRKSASSLCPLAGRLVRSQRVYSTSIFNALNNHSNFYCPPPLGTTFSSFRDFSS 60
           MAIASIIRKSASSLCPLAGRL R QRVYSTSIFNALNNHSNFYC  PLGTT SSFRDFSS
Sbjct: 1   MAIASIIRKSASSLCPLAGRLFRGQRVYSTSIFNALNNHSNFYCSRPLGTTLSSFRDFSS 60

Query: 61  SKRPSSDEALIRVIESEVKCASETDDHDRVEEVPKGFPFEIQDNPGLQTITLKRSYQDE- 120
           SKRPSSDEALIRVIESEVKCASETDDHDRVEEVPKGFPFEIQDNPGLQTITLKRSYQDE 
Sbjct: 61  SKRPSSDEALIRVIESEVKCASETDDHDRVEEVPKGFPFEIQDNPGLQTITLKRSYQDEV 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 ITVEVHMPDLVTGRTINANDDDGDDDGGNKGNQSCIPLIVSVSKKNGPSLEFSCSAYPEE 180

Query: 181 ----SLIVKHPEHSEDQIAYEGPDFHDLDENLQKAFHKYLEIRGIKPSTTIFLHEYMINK 193
               SLIVKHPEHSEDQIAYEGPDFHDLDENLQKAFHKYLEIRGIKPSTTIFLHEYMINK
Sbjct: 181 ISIESLIVKHPEHSEDQIAYEGPDFHDLDENLQKAFHKYLEIRGIKPSTTIFLHEYMINK 240

[Close]

BLAST of Cp4.1LG01g25570 vs. ExPASy TrEMBL
Match: A0A6J1JK83 (uncharacterized protein At2g39795, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111487665 PE=4 SV=1)

HSP 1 Score: 354 bits (909), Expect = 5.04e-122
Identity = 192/258 (74.42%), Postives = 192/258 (74.42%), Query Frame = 0


Query: 1   MAIASIIRKSASSLCPLAGRLVRSQRVYSTSIFNALNNHSNFYCPPPLGTTFSSFRDFSS 60
           MAIASIIRKSASSLCPLAGRLVRSQRVYSTSIFNALNNHSNFYCPPPLGTT SSFRDFSS
Sbjct: 1   MAIASIIRKSASSLCPLAGRLVRSQRVYSTSIFNALNNHSNFYCPPPLGTTCSSFRDFSS 60

Query: 61  SKRPSSDEALIRVIESEVKCASETDDHDRVEEVPKGFPFEIQDNPGLQTITLKRSYQDE- 120
           SKRPSSDEALIRVIESEVKCASETDDHDRVEEVPKGFPFEIQDNPGLQTITLKRSYQDE 
Sbjct: 61  SKRPSSDEALIRVIESEVKCASETDDHDRVEEVPKGFPFEIQDNPGLQTITLKRSYQDEV 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 INVEVHMPDLVTGRTINANDDDGDDDGGNKGNQSCIPLIVSVSKKNGPSLEFSCSAYPDE 180

Query: 181 ----SLIVKHPEHSEDQIAYEGPDFHDLDENLQKAFHKYLEIRGIKPSTTIFLHEYMINK 193
               SLIVKHPEHSEDQIAYEGPDFHDLDENLQKAFHKYLEIRGIKPSTTIFLHEYMINK
Sbjct: 181 ISIESLIVKHPEHSEDQIAYEGPDFHDLDENLQKAFHKYLEIRGIKPSTTIFLHEYMINK 240

[Close]

BLAST of Cp4.1LG01g25570 vs. ExPASy TrEMBL
Match: A0A6J1GSE9 (uncharacterized protein At2g39795, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111457063 PE=4 SV=1)

HSP 1 Score: 353 bits (907), Expect = 1.02e-121
Identity = 190/258 (73.64%), Postives = 191/258 (74.03%), Query Frame = 0


Query: 1   MAIASIIRKSASSLCPLAGRLVRSQRVYSTSIFNALNNHSNFYCPPPLGTTFSSFRDFSS 60
           MAIASIIRKSASSLCPLAGRL R QRVYSTS+FNALNNHSNFYCPPPLGTTFSSFRDFSS
Sbjct: 1   MAIASIIRKSASSLCPLAGRLFRGQRVYSTSVFNALNNHSNFYCPPPLGTTFSSFRDFSS 60

Query: 61  SKRPSSDEALIRVIESEVKCASETDDHDRVEEVPKGFPFEIQDNPGLQTITLKRSYQDE- 120
           SKRPSSDEALIRVIESEVKCASETDDHDRVEEVPKGFPFEIQDNPGLQTITLKRSYQDE 
Sbjct: 61  SKRPSSDEALIRVIESEVKCASETDDHDRVEEVPKGFPFEIQDNPGLQTITLKRSYQDEV 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 INVEVHMPDLVTGRTINANDVDGDDDGGNKGNQSCIPLMVSVSKKNGPSLEFSCSAYPDD 180

Query: 181 ----SLIVKHPEHSEDQIAYEGPDFHDLDENLQKAFHKYLEIRGIKPSTTIFLHEYMINK 193
               SLIVKHPEHSEDQIAYEGPDFHDLDENLQKAFHKYLEIRGIKPSTTIFLHEYMINK
Sbjct: 181 ISIESLIVKHPEHSEDQIAYEGPDFHDLDENLQKAFHKYLEIRGIKPSTTIFLHEYMINK 240

[Close]

BLAST of Cp4.1LG01g25570 vs. ExPASy TrEMBL
Match: A0A6J1BZH6 (uncharacterized protein At2g39795, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111006664 PE=4 SV=1)

HSP 1 Score: 295 bits (755), Expect = 1.38e-98
Identity = 161/258 (62.40%), Postives = 177/258 (68.60%), Query Frame = 0


Query: 1   MAIASIIRKSASSLCPLAGRLVRSQRVYSTSIFNALNNHSNFYCPPPLGTTFSSFRDFSS 60
           MA+ SIIR+S+SSL PLA RL   QR++  SIFNALNNHSNF   P LG + +SFR FS+
Sbjct: 1   MALTSIIRRSSSSLRPLAARLFPVQRIHRPSIFNALNNHSNFSSRPLLGPSVTSFRHFSA 60

Query: 61  SKRPSSDEALIRVIESEVKCASETDDHDRVEEVPKGFPFEIQDNPGLQTITLKRSYQDE- 120
           SKRPSSDE+LIRVIESE+KCASETDDHDRVE+VP+GFPFEIQDNPGLQTITLKR+YQDE 
Sbjct: 61  SKRPSSDESLIRVIESEIKCASETDDHDRVEDVPQGFPFEIQDNPGLQTITLKRTYQDEV 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 ISVEVHMPDLVTGQNINDDDDDDNDDGGSKANQSSIPLVVSVSKKNGPSLEFSCSAYPDE 180

Query: 181 ----SLIVKHPEHSEDQIAYEGPDFHDLDENLQKAFHKYLEIRGIKPSTTIFLHEYMINK 193
               SLIVKHPEHSEDQI+YEGPDFHDLDENLQKAFHKYLEIRGIKPSTT FLHEYMINK
Sbjct: 181 ISLESLIVKHPEHSEDQISYEGPDFHDLDENLQKAFHKYLEIRGIKPSTTNFLHEYMINK 240

[Close]

BLAST of Cp4.1LG01g25570 vs. ExPASy TrEMBL
Match: A0A5A7TIG8 (Mitochondrial glycoprotein family protein, putative isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold6G00270 PE=4 SV=1)

HSP 1 Score: 279 bits (714), Expect = 1.94e-92
Identity = 151/257 (58.75%), Postives = 175/257 (68.09%), Query Frame = 0


Query: 1   MAIASIIRKSASSLCPLAGRLVRSQRVYSTSIFNALNNHSNFYCPPPLGTTFSSFRDFSS 60
           MA+ASIIRKSASSLCPLAGRL R QR+Y+TSIFN+ N H   + P     + +SFRDFSS
Sbjct: 1   MALASIIRKSASSLCPLAGRLFRGQRLYATSIFNSFNTHRPLFRP-----SVTSFRDFSS 60

Query: 61  SKRPSSDEALIRVIESEVKCASETDDHDRVEEVPKGFPFEIQDNPGLQTITLKRSYQDE- 120
           S R SSDE+L+RVI+SE++CA+ETDDHDRVEEVP+GFPFEIQD+PGLQT+TLKR+YQDE 
Sbjct: 61  SNRSSSDESLLRVIDSEIQCATETDDHDRVEEVPEGFPFEIQDHPGLQTVTLKRTYQDEV 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 IVVEVHMPDLVTGQNANDNDEDDEEDDSKANQSCIPLVVSVSKKTGPSLEFSCSAYPDEI 180

Query: 181 ---SLIVKHPEHSEDQIAYEGPDFHDLDENLQKAFHKYLEIRGIKPSTTIFLHEYMINKD 193
              SL+VK+PEHS+DQIAYEGPDFHDLDENLQKAFH+YLEIRGIKPSTT FLHEYMINKD
Sbjct: 181 SIDSLVVKNPEHSDDQIAYEGPDFHDLDENLQKAFHRYLEIRGIKPSTTNFLHEYMINKD 240

[Close]

BLAST of Cp4.1LG01g25570 vs. ExPASy TrEMBL
Match: A0A1S3B437 (uncharacterized protein At2g39795, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103485528 PE=4 SV=1)

HSP 1 Score: 279 bits (714), Expect = 1.94e-92
Identity = 151/257 (58.75%), Postives = 175/257 (68.09%), Query Frame = 0


Query: 1   MAIASIIRKSASSLCPLAGRLVRSQRVYSTSIFNALNNHSNFYCPPPLGTTFSSFRDFSS 60
           MA+ASIIRKSASSLCPLAGRL R QR+Y+TSIFN+ N H   + P     + +SFRDFSS
Sbjct: 1   MALASIIRKSASSLCPLAGRLFRGQRLYATSIFNSFNTHRPLFRP-----SVTSFRDFSS 60

Query: 61  SKRPSSDEALIRVIESEVKCASETDDHDRVEEVPKGFPFEIQDNPGLQTITLKRSYQDE- 120
           S R SSDE+L+RVI+SE++CA+ETDDHDRVEEVP+GFPFEIQD+PGLQT+TLKR+YQDE 
Sbjct: 61  SNRSSSDESLLRVIDSEIQCATETDDHDRVEEVPEGFPFEIQDHPGLQTVTLKRTYQDEV 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 IVVEVHMPDLVTGQNANDNDEDDEEDDSKANQSCIPLVVSVSKKTGPSLEFSCSAYPDEI 180

Query: 181 ---SLIVKHPEHSEDQIAYEGPDFHDLDENLQKAFHKYLEIRGIKPSTTIFLHEYMINKD 193
              SL+VK+PEHS+DQIAYEGPDFHDLDENLQKAFH+YLEIRGIKPSTT FLHEYMINKD
Sbjct: 181 SIDSLVVKNPEHSDDQIAYEGPDFHDLDENLQKAFHRYLEIRGIKPSTTNFLHEYMINKD 240

[Close]

BLAST of Cp4.1LG01g25570 vs. TAIR 10
Match: AT3G55605.1 (Mitochondrial glycoprotein family protein )

HSP 1 Score: 139.0 bits (349), Expect = 3.9e-33
Identity = 94/263 (35.74%), Postives = 131/263 (49.81%), Query Frame = 0


Query: 1   MAIASIIRKSASSLCPLAGRLVRSQRVYSTSIFNALNNHSNFYCPPPLGTTFSS--FRDF 60
           M  A  IR+SAS+L  + GR+ R+Q V      +A+ N S+    P L   F S  F   
Sbjct: 1   MGFALCIRRSASTLASVCGRVARAQAV------SAIVNRSSLVPKPSLLRPFVSRGFPYS 60

Query: 61  SSSKRPSSDEALIRVIESEVKCASETDDHDRVEEV--PKGFPFEIQDNPGLQTITLKRSY 120
           ++++   SD+ LI+VI+SE+K + E DDHD  EE      FPF+I+DNPG +T+TL R Y
Sbjct: 61  TATEPLKSDQTLIQVIDSEIKDSFEADDHDADEETIDSSDFPFKIEDNPGHRTVTLTREY 120

Query: 121 QDESLIV----------------------------------------------------- 180
             E + V                                                     
Sbjct: 121 NGEQIKVEVSMPGLAMDENEDDVDDDEDGDGRHEKSNESSIPLVVTVTKKSGLSLEFSCT 180

Query: 181 --------------KHPEHSEDQIAYEGPDFHDLDENLQKAFHKYLEIRGIKPSTTIFLH 193
                         +  + SE+Q+ Y+GPDF +LDEN++K+FHK+LE RGIK S T FL+
Sbjct: 181 AFPDEIVIDGLSVNRPDDSSEEQLTYDGPDFQELDENMRKSFHKFLETRGIKASATDFLY 240

[Close]

BLAST of Cp4.1LG01g25570 vs. TAIR 10
Match: AT5G02050.1 (Mitochondrial glycoprotein family protein )

HSP 1 Score: 138.7 bits (348), Expect = 5.1e-33
Identity = 93/266 (34.96%), Postives = 132/266 (49.62%), Query Frame = 0


Query: 1   MAIASIIRKSASSLCPLAGRLVRSQ---RVYSTSIFNALNNHSNFYCPPPLGTTFSSFRD 60
           MA++++ R+++S++  LA R  RS    R  + S+   +              + SSF  
Sbjct: 1   MALSTVFRRASSTVANLAFRAGRSPVSFRSGAVSVERLIRGSHQIRRGSVSSFSVSSFST 60

Query: 61  FSSSKRPSSDEALIRVIESEVKCASETD---DHDRVEEVPKGFPFEIQDNPGLQTITLKR 120
            S+  + ++DE L+ VIESE++CA   +   D D +E+ P+GFPFEI DN G +T+ L R
Sbjct: 61  ESAISKTTADENLVSVIESEIECAVAEEAPHDTDFLEDKPEGFPFEIIDNSGERTVLLTR 120

Query: 121 SYQDE------------------------------------------------------- 180
            ++DE                                                       
Sbjct: 121 KFEDETIQVEVDSVASYDDEDEEEEAEPNNEEDDEDQESSGKVRVPMVVSVQKGDGVCLE 180

Query: 181 -------------SLIVKHPEHSEDQIAYEGPDFHDLDENLQKAFHKYLEIRGIKPSTTI 193
                        SL +K P+ S++ +AYEGPDF DLDENLQKAFH+YLEIRGIKPS T 
Sbjct: 181 FGVSAYPDEIVIDSLSIKQPQGSDNDLAYEGPDFDDLDENLQKAFHRYLEIRGIKPSFTT 240

[Close]

BLAST of Cp4.1LG01g25570 vs. TAIR 10
Match: AT5G05990.1 (Mitochondrial glycoprotein family protein )

HSP 1 Score: 129.4 bits (324), Expect = 3.1e-30
Identity = 77/208 (37.02%), Postives = 101/208 (48.56%), Query Frame = 0


Query: 59  SSSKRPSSDEALIRVIESEVKCASETDDHDRVEEVPKGFPFEIQDNPGLQTITLKRSYQD 118
           S+ KR S  + L+R+IE E+  A + DD+ RVEE P GFPFE++D PG + +TL R Y+ 
Sbjct: 51  STKKRASPTDPLLRIIEEEIGYAEKADDYHRVEETPSGFPFEMEDKPGGKIVTLTREYEG 110

Query: 119 ESLIVK------------------------------------------------------ 178
           E++ V+                                                      
Sbjct: 111 ETVKVEVHMTNLVTGDKEDDEDDEEEAENEEDEDEDKPLKPKQSNVPLLVTLSKKTGPSL 170

Query: 179 --------------------HPEHSEDQIAYEGPDFHDLDENLQKAFHKYLEIRGIKPST 193
                                 + S+D++AYEGP F  LDE L+KAFH+Y+EIRGIKPS 
Sbjct: 171 EFRCTAFPDRIAIKDMWVTFPDDPSKDELAYEGPSFRVLDEKLRKAFHRYIEIRGIKPSM 230

[Close]

BLAST of Cp4.1LG01g25570 vs. TAIR 10
Match: AT2G39795.1 (Mitochondrial glycoprotein family protein )

HSP 1 Score: 124.0 bits (310), Expect = 1.3e-28
Identity = 93/256 (36.33%), Postives = 124/256 (48.44%), Query Frame = 0


Query: 1   MAIA-SIIRKSASSLCPLAGRLVRSQRVYSTSIFNALNNHSNFYCPPPLGTTFSSFRDFS 60
           MA+A  ++R+SAS    + G  VR       SI    N  S    P  +    S   ++S
Sbjct: 1   MALAWCVVRRSASKFASVYGGRVR-------SISAVANRASLARNPSSIRPFVSRALNYS 60

Query: 61  SS-KRPSSDEALIRVIESEVKCASETDDHDRVEEV-PKGFPFEIQDNPGLQTITLKRSYQ 120
           ++  R SS++ LIRVI+SE+  A ++D+ D  EE+ P  FPF I+D PG Q +TL R Y 
Sbjct: 61  TAIDRISSEQTLIRVIDSEINSALQSDNIDSDEEMTPGSFPFRIEDKPGNQNVTLTRDYN 120

Query: 121 DE---------------------------------------------------------- 180
            E                                                          
Sbjct: 121 GEHIKVVVSMPSLVSDENDDDDDDDEGPSNESSIPLVVTVTKKSGLTLEFSCMAFPDEIA 180

Query: 181 --SLIVKHPEHS-EDQIAYEGPDFHDLDENLQKAFHKYLEIRGIKPSTTIFLHEYMINKD 193
             +L VKHP  S EDQ+A EGPDF DLDENL+K F+K+LEIRG+K STT FLHEYM  K 
Sbjct: 181 IDALSVKHPGDSLEDQLANEGPDFEDLDENLKKTFYKFLEIRGVKASTTNFLHEYMTRKV 240

[Close]

BLAST of Cp4.1LG01g25570 vs. TAIR 10
Match: AT2G39790.1 (Mitochondrial glycoprotein family protein )

HSP 1 Score: 82.0 bits (201), Expect = 5.6e-16
Identity = 75/248 (30.24%), Postives = 109/248 (43.95%), Query Frame = 0


Query: 1   MAIASIIRKSASSLCPLAGRLVRSQRVYSTSIFNALNNHSNFYCPPPLGTTFS-SFRDFS 60
           MA A  +R+SAS L    G+        + SI   +N  S    P PL    S  F    
Sbjct: 1   MAFAWCVRRSASKLASACGQ--------ARSISAVVNRPSLALNPSPLSPFVSRGFLYTM 60

Query: 61  SSKRPSSDEALIRVIESEVKCASETDDHDRVEEV-PKGFPFEIQDNPGLQTITLKRSYQD 120
           +  + SS++ L  VI+SE+  A +TDD +  EE+ P  FP +I+D PG Q++TL   Y D
Sbjct: 61  AVDKLSSEQTLHLVIDSELNSALQTDDPNLNEEMAPGSFPLKIRDKPGDQSVTLTAYYND 120

Query: 121 ESLIVK--HPEHSEDQIAYEGPD------------------------------------- 180
           E + V    P   +D I   GP+                                     
Sbjct: 121 ERIHVDVGMPYLGDDVIDVFGPNNDELSFPLVVTVIKKNGVSIEFTCQAYADYIDLTDLT 180

Query: 181 ---------------FHDLDENLQKAFHKYLEIRGIKPSTTIFLHEYMINKDSKEFLLWL 193
                          F +LD+NL+KAFH+YL  R +  + T  LH+YM++K  +E+LLWL
Sbjct: 181 VHDYQYQMGETDWPRFKNLDDNLKKAFHRYLATR-LDANITKLLHKYMVSKIKREYLLWL 239

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g25570 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W487	1.8e-27	36.33	Uncharacterized protein At2g39795, mitochondrial OS=Arabidopsis thaliana OX=3702...	[more]
O22288	8.0e-15	30.24	Uncharacterized protein At2g39790, mitochondrial OS=Arabidopsis thaliana OX=3702...	[more]
P40513	1.0e-06	38.98	Mitochondrial acidic protein MAM33 OS=Saccharomyces cerevisiae (strain ATCC 2045...	[more]
O94675	1.5e-05	39.66	Mitochondrial acidic protein mam33 OS=Schizosaccharomyces pombe (strain 972 / AT...	[more]

BLAST of Cp4.1LG01g25570 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023518233.1	6.30e-123	74.81	uncharacterized protein At2g39795, mitochondrial-like [Cucurbita pepo subsp. pep...	[more]
XP_022990917.1	1.04e-121	74.42	uncharacterized protein At2g39795, mitochondrial-like [Cucurbita maxima] >XP_022...	[more]
XP_022954962.1	2.10e-121	73.64	uncharacterized protein At2g39795, mitochondrial-like [Cucurbita moschata] >XP_0...	[more]
KAG7033332.1	2.84e-119	73.26	putative protein, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6602646.1	4.70e-118	72.87	putative protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Cp4.1LG01g25570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JK83	5.04e-122	74.42	uncharacterized protein At2g39795, mitochondrial-like OS=Cucurbita maxima OX=366...	[more]
A0A6J1GSE9	1.02e-121	73.64	uncharacterized protein At2g39795, mitochondrial-like OS=Cucurbita moschata OX=3...	[more]
A0A6J1BZH6	1.38e-98	62.40	uncharacterized protein At2g39795, mitochondrial-like OS=Momordica charantia OX=...	[more]
A0A5A7TIG8	1.94e-92	58.75	Mitochondrial glycoprotein family protein, putative isoform 1 OS=Cucumis melo va...	[more]
A0A1S3B437	1.94e-92	58.75	uncharacterized protein At2g39795, mitochondrial-like OS=Cucumis melo OX=3656 GN...	[more]

BLAST of Cp4.1LG01g25570 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G55605.1	3.9e-33	35.74	Mitochondrial glycoprotein family protein	[more]
AT5G02050.1	5.1e-33	34.96	Mitochondrial glycoprotein family protein	[more]
AT5G05990.1	3.1e-30	37.02	Mitochondrial glycoprotein family protein	[more]
AT2G39795.1	1.3e-28	36.33	Mitochondrial glycoprotein family protein	[more]
AT2G39790.1	5.6e-16	30.24	Mitochondrial glycoprotein family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036561	Mitochondrial glycoprotein superfamily	GENE3D	3.10.280.10	Mitochondrial glycoprotein	coord: 125..191 e-value: 9.3E-24 score: 86.3
IPR036561	Mitochondrial glycoprotein superfamily	GENE3D	3.10.280.10	Mitochondrial glycoprotein	coord: 59..124 e-value: 1.9E-10 score: 42.9
IPR036561	Mitochondrial glycoprotein superfamily	SUPERFAMILY	54529	Mitochondrial glycoprotein MAM33-like	coord: 63..192
IPR003428	Mitochondrial glycoprotein	PFAM	PF02330	MAM33	coord: 75..123 e-value: 8.9E-7 score: 29.1 coord: 129..191 e-value: 1.1E-22 score: 81.1
IPR003428	Mitochondrial glycoprotein	PANTHER	PTHR10826	COMPLEMENT COMPONENT 1	coord: 1..121
IPR003428	Mitochondrial glycoprotein	PANTHER	PTHR10826	COMPLEMENT COMPONENT 1	coord: 120..192
None	No IPR available	PANTHER	PTHR10826:SF30	ACIDIC PROTEIN MAM33, MITOCHONDRIAL, PUTATIVE-RELATED	coord: 120..192 coord: 1..121

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g25570.1	Cp4.1LG01g25570.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005759	mitochondrial matrix