Cp4.1LG01g25550 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACTCCATGGATCGCTCTCGAGCTTTCCTTCGGGATGTCAAGCGCCTGGTTGTCAAGGTACCTCTCATTTCAACCACATTTTCATGTTTCCCGATGTTCTTTTTTTATTCCTTTATTTTTTTTTTGTGGTTTTCATTCTGTTTGAGCTTTATATTCTTCGTTCTCATCAATGTTTGCCGATTTGGATTCCCTCTGTGTGTTGCAACTTCTCCTCAGTTCATCCTACTGGAAAACCACGTGCAGATTATCTCAATTTTGGATCATCAAACCGTTGATAATATAATTTACTTACCTGTTATTGGATGTTGTGCTTTTCTTATTGAAGGTTGGGACGGCGGTGGTAACGCGAAGTGATGGAAGATTAGCCTTAGGCAGACTAGGAGCATTGTGTGAGCAGGTATTTACCTTGCACGCTCAAGTTCAATCTTTTGATAGTGATAGGACTTTTTTTTTTTTTTTTTTTTAATATTAAGATTACAATCTGGAATGCAGATCAAGGAACTTAACTCCCAAGAATACGAGGTTATTTTGGTTTCATCCGGTGCTGTTGGCATTGGTCGTCAAAGGCTCCGATACAGGAAGCTCGTTAATAGCAGGTTATTTTGTGCGGGATAA ATGGACTCCATGGATCGCTCTCGAGCTTTCCTTCGGGATGTCAAGCGCCTGGTTGTCAAGGTTGGGACGGCGGTGGTAACGCGAAGTGATGGAAGATTAGCCTTAGGCAGACTAGGAGCATTGTGTGAGCAGATCAAGGAACTTAACTCCCAAGAATACGAGGTTATTTTGGTTTCATCCGGTGCTGTTGGCATTGGTCGTCAAAGGCTCCGATACAGGAAGCTCGTTAATAGCAGGTTATTTTGTGCGGGATAA ATGGACTCCATGGATCGCTCTCGAGCTTTCCTTCGGGATGTCAAGCGCCTGGTTGTCAAGGTTGGGACGGCGGTGGTAACGCGAAGTGATGGAAGATTAGCCTTAGGCAGACTAGGAGCATTGTGTGAGCAGATCAAGGAACTTAACTCCCAAGAATACGAGGTTATTTTGGTTTCATCCGGTGCTGTTGGCATTGGTCGTCAAAGGCTCCGATACAGGAAGCTCGTTAATAGCAGGTTATTTTGTGCGGGATAA MDSMDRSRAFLRDVKRLVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQEYEVILVSSGAVGIGRQRLRYRKLVNSRLFCAG Homology
BLAST of Cp4.1LG01g25550 vs. ExPASy Swiss-Prot
Match: Q96480 (Delta-1-pyrroline-5-carboxylate synthase OS=Solanum lycopersicum OX=4081 GN=PRO2 PE=2 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 2.5e-29 Identity = 62/78 (79.49%), Postives = 76/78 (97.44%), Query Frame = 0
BLAST of Cp4.1LG01g25550 vs. ExPASy Swiss-Prot
Match: O04015 (Delta-1-pyrroline-5-carboxylate synthase OS=Actinidia deliciosa OX=3627 PE=2 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 5.5e-29 Identity = 62/78 (79.49%), Postives = 74/78 (94.87%), Query Frame = 0
BLAST of Cp4.1LG01g25550 vs. ExPASy Swiss-Prot
Match: O04226 (Delta-1-pyrroline-5-carboxylate synthase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=P5CS1 PE=2 SV=2) HSP 1 Score: 127.1 bits (318), Expect = 9.4e-29 Identity = 62/78 (79.49%), Postives = 73/78 (93.59%), Query Frame = 0
BLAST of Cp4.1LG01g25550 vs. ExPASy Swiss-Prot
Match: P54887 (Delta-1-pyrroline-5-carboxylate synthase A OS=Arabidopsis thaliana OX=3702 GN=P5CSA PE=1 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 4.7e-28 Identity = 63/78 (80.77%), Postives = 70/78 (89.74%), Query Frame = 0
BLAST of Cp4.1LG01g25550 vs. ExPASy Swiss-Prot
Match: O65361 (Delta-1-pyrroline-5-carboxylate synthase OS=Mesembryanthemum crystallinum OX=3544 GN=P5CS PE=2 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 7.9e-28 Identity = 62/75 (82.67%), Postives = 70/75 (93.33%), Query Frame = 0
BLAST of Cp4.1LG01g25550 vs. NCBI nr
Match: KAG7033331.1 (hypothetical protein SDJN02_07386 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 150 bits (378), Expect = 5.51e-40 Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0
BLAST of Cp4.1LG01g25550 vs. NCBI nr
Match: XP_023546433.1 (delta-1-pyrroline-5-carboxylate synthase [Cucurbita pepo subsp. pepo]) HSP 1 Score: 150 bits (378), Expect = 5.82e-40 Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0
BLAST of Cp4.1LG01g25550 vs. NCBI nr
Match: KAG6602645.1 (hypothetical protein SDJN03_07878, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 150 bits (378), Expect = 5.82e-40 Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0
BLAST of Cp4.1LG01g25550 vs. NCBI nr
Match: XP_022954931.1 (delta-1-pyrroline-5-carboxylate synthase [Cucurbita moschata]) HSP 1 Score: 150 bits (378), Expect = 5.82e-40 Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0
BLAST of Cp4.1LG01g25550 vs. NCBI nr
Match: KAA0041452.1 (delta-1-pyrroline-5-carboxylate synthase [Cucumis melo var. makuwa] >TYK24326.1 delta-1-pyrroline-5-carboxylate synthase [Cucumis melo var. makuwa]) HSP 1 Score: 149 bits (377), Expect = 7.51e-40 Identity = 77/78 (98.72%), Postives = 78/78 (100.00%), Query Frame = 0
BLAST of Cp4.1LG01g25550 vs. ExPASy TrEMBL
Match: A0A6J1GSB0 (Delta-1-pyrroline-5-carboxylate synthase OS=Cucurbita moschata OX=3662 GN=LOC111457038 PE=3 SV=1) HSP 1 Score: 150 bits (378), Expect = 2.82e-40 Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0
BLAST of Cp4.1LG01g25550 vs. ExPASy TrEMBL
Match: A0A5A7TDE9 (Delta-1-pyrroline-5-carboxylate synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G001000 PE=3 SV=1) HSP 1 Score: 149 bits (377), Expect = 3.64e-40 Identity = 77/78 (98.72%), Postives = 78/78 (100.00%), Query Frame = 0
BLAST of Cp4.1LG01g25550 vs. ExPASy TrEMBL
Match: A0A1S3B2W5 (Delta-1-pyrroline-5-carboxylate synthase OS=Cucumis melo OX=3656 GN=LOC103485529 PE=3 SV=1) HSP 1 Score: 149 bits (377), Expect = 3.81e-40 Identity = 77/78 (98.72%), Postives = 78/78 (100.00%), Query Frame = 0
BLAST of Cp4.1LG01g25550 vs. ExPASy TrEMBL
Match: A0A0A0KBH3 (Delta-1-pyrroline-5-carboxylate synthase OS=Cucumis sativus OX=3659 GN=Csa_6G008780 PE=3 SV=1) HSP 1 Score: 148 bits (373), Expect = 1.37e-39 Identity = 76/78 (97.44%), Postives = 77/78 (98.72%), Query Frame = 0
BLAST of Cp4.1LG01g25550 vs. ExPASy TrEMBL
Match: A0A6J1JTQ8 (Delta-1-pyrroline-5-carboxylate synthase OS=Cucurbita maxima OX=3661 GN=LOC111489663 PE=3 SV=1) HSP 1 Score: 147 bits (370), Expect = 3.61e-39 Identity = 76/78 (97.44%), Postives = 78/78 (100.00%), Query Frame = 0
BLAST of Cp4.1LG01g25550 vs. TAIR 10
Match: AT2G39800.1 (delta1-pyrroline-5-carboxylate synthase 1 ) HSP 1 Score: 124.8 bits (312), Expect = 3.3e-29 Identity = 63/78 (80.77%), Postives = 70/78 (89.74%), Query Frame = 0
BLAST of Cp4.1LG01g25550 vs. TAIR 10
Match: AT2G39800.4 (delta1-pyrroline-5-carboxylate synthase 1 ) HSP 1 Score: 124.8 bits (312), Expect = 3.3e-29 Identity = 63/78 (80.77%), Postives = 70/78 (89.74%), Query Frame = 0
BLAST of Cp4.1LG01g25550 vs. TAIR 10
Match: AT2G39800.3 (delta1-pyrroline-5-carboxylate synthase 1 ) HSP 1 Score: 124.8 bits (312), Expect = 3.3e-29 Identity = 63/78 (80.77%), Postives = 70/78 (89.74%), Query Frame = 0
BLAST of Cp4.1LG01g25550 vs. TAIR 10
Match: AT3G55610.1 (delta 1-pyrroline-5-carboxylate synthase 2 ) HSP 1 Score: 121.3 bits (303), Expect = 3.7e-28 Identity = 61/78 (78.21%), Postives = 69/78 (88.46%), Query Frame = 0
BLAST of Cp4.1LG01g25550 vs. TAIR 10
Match: AT3G55610.2 (delta 1-pyrroline-5-carboxylate synthase 2 ) HSP 1 Score: 121.3 bits (303), Expect = 3.7e-28 Identity = 61/78 (78.21%), Postives = 69/78 (88.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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