Cp4.1LG01g25400 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g25400
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	ras-related protein Rab2BV-like
Location	Cp4.1LG01: 20787930 .. 20790877 (+)
RNA-Seq Expression	Cp4.1LG01g25400
Synteny	Cp4.1LG01g25400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCTCCAAGAACAGTTGCTATTCCTCGACTATAAAACTGGCCTTTGGGAACCCATGTCTTCATCGCATTGAAGAACAAGCAGATAATGGAGTCTCTCAAGAAATACACTTCTCTCCTGCTGTTTCTAGCGCTGTTTCTGGTTACTGCAAGGTGTGATTATTATGGGCAACAAAGGGGCGAGTGTGCCCCGTCTAATCCCGAAAGAGAGGCCTTCAAAATGATGCCGTGTTTAGCTGCTTCCAAAGACCCTTACTATCCAGTTTCTCATAGATGCTGCGATCAAGTCAGGAAATTAGGCCAAAGCACCAGCTGTCTCTGTGCCGTTATGTTGTCCAACACAGCTGCAATGGTTGGAGCTAAGCCTGAAATTGCTATCACCATTCCAAAACGTTGCAACATTGCTGAACGCCCTGTTGGCTACAACTGCGGAGGTTTGTATATCTAGAACGAAACATTTCTTATATGAATCCTAGTAAAACGCTAATTACAATCTACTTTACATTTTGCAGGCTATGAACTACCTTGAAGCTGCATTCTCTGCTCCAACTATGTTGGAAGTTTAGGGGAGAAATCATATGTATTGTGCTTATTGTAAACCTATAGTGACTTACATCACTTGAGAAATAAATAAAAACATCGTGTTTGTCGTTAAAAAATTGTGTTCCGATGCATAATGGTAATTTTGTGCATCGTTGAGGGTTAAATGGTAATTTCGGTCAATATATAGTTTGACTTTTATAAAGTAAAAAAAAAAAAAAAAAAAAAAAAAANAAAAAAGGTAATTGGGAAGTTATTGGCAGTTTGCATTAAAAAAGAAAAAAAGGTTACATATTAATAATGTTTGTTTATGGAAAATAAAGGGGAGAAAATAGAAACGGCGATTATTTTAAATAATTTTCCATTTATGCCCATGCGGCGTTCTGTGCCACATGAAAGGCCGTCTTCAGTGCCTTTCCCTCCGTTTTTCCGTTTTCTTTTCGTTGGTTCTCTAAAATCCCTCGTCTTTCCTTAAAACTCGCTAATTAAATTTCTAAGAAGTTTCAAAAAATTCCTAATCCAATTTCCACTCTCCCTTCTTCCCAATCCATTCACCATTTTCTTTATGGTTAGTTCTTCCTTCTCTTTTAATCCTCCATCGATCGTGTTTTTTTTCTTTAAGCTGTTATTATGCACGCAAAATGCGATTGCTAATGCGTTTCTTTGTTCTGAATCGTATGTCGTTGGATCTGGCAGGTGTTAGGCTTGGAATTTGTTTAGGAATTTGATCAAATGGCTTACAAGGTGGATCACGAATACGATTATCTCTTCAAGATCGTTTTGATCGGTGATTCTGGCGTTGGAAAGTCCAACATTCTTTCCAGGTTTACGCGGAACGAGTTCTGTTTGGAGTCCAAATCCACAATTGGAGTTGAATTCGCTACGCGGACTTTGCAGGTTGGCTACGCTACCTCCTTTTTTTATTCCTCTTCCTCCTTCAATTTGAAGTCATATCCGTATTAGGTATTAACCTCGATGAAGATCGATGAATTACTTTCTATAGTTGATCGTAAATTTCCGTTACTTAATTAACAATTATAGAATTTTCGAGAATTTTTTATCAGGAGATTTCGGATCGATCACGACGAACTCGAATAAATTAGAAGAATAAATTAGAAGATCGCTATCATAATTGTATAAATAGGCTTGGTTTGGAAATCCTGTCCTCCTTTCCCCCAAGTATGAATCTGACTCGGAACAATGCATATTGATGCACATTTTTCGTCCATTTCAATTGTTTATGAACGGATTTGAAGCACAAGTGTTTAGAATTAGACTGTCTGGAGTAAGTCAAAGTGTTTTTCGTCCATTTCAATTGTTTCAATTGTGAATCTGACTCGGAACAATGCATAATGATGCACATTTTTCGTCCATTTCCATTGCTTATGAACGGATTTGAGGCAAAAGTGTTAAGAATTAGACTATGGAGTAAGTCAACAATGATCAACAATCGAGAATGACATTTGCTTTATCTTTTTGGATTGAGAAATTGATTCTGTATGATTAAAGTAAATGAATGTTTAGAATTGGTTTGAGACAGGTAGAGGGGAAGACAGTGAAGGCCCAAATATGGGACACAGCAGGGCAAGAGAGATACCGAGCCATTACGAGTGCATATTACAGGGGAGCAGTGGGTGCACTTCTGGTATATGATATTACCAAGAGACAAACCTTTGACAATGTCCAAAGATGGCTACGCGAACTGAGAGACCATGCTGATTCCAACATCGTGATCATGATGGCCGGAAACAAGGCTGATCTGAACCATCTCCGGGCAGTTTCCGCGGAAGATGCTCAGGTATTGGCAGAGAAAGAAGGGCTGTCATTTCTAGAGACCTCAGCCTTGGAGGCCTTGAATGTGGAGAAGGCTTTTCAGACCATTTTGCTCGACATTTACCACATCATTAGCAAGAAAGCTTTGGCCGCTCAGGAAGCCGCTTCCACCCCCGGCATCCCTCACGGCACCACCATCAACGTCGCTAATATCTCAGGCAATTACAACAAGAGAACTTGTTGCTCTAATTGATCCAGTGATGATGATGATGATGATGATGGTTTGAGGGAAACAAAACAAAGGGGGCTGGTGGTAGGAACTTAAAAGGAAGAGTTTTTTTCCCCCCTTTTCTTTTTGTTGTTGTAAAAGGCACCATGAATAGAGAGAGATACCCTTTCATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTATAGATGGAAAAAACTCAGACTGCTTCTTCAATTTCTATAGGAACTTCTGTTTGTTTCTGTGGAAAATGGGAGATTTTTCATCCAGGATGTAGCTTCTTCGATTATTATTGTTATGATTATGATTTTGATTATTATTGTCATTCTTTTTTTAAATAAATTCTT

mRNA sequence

TCCTCCAAGAACAGTTGCTATTCCTCGACTATAAAACTGGCCTTTGGGAACCCATGTCTTCATCGCATTGAAGAACAAGCAGATAATGGAGTCTCTCAAGAAATACACTTCTCTCCTGCTGTTTCTAGCGCTGTTTCTGGTTACTGCAAGGTGTGATTATTATGGGCAACAAAGGGGCGAGTGTGCCCCGTCTAATCCCGAAAGAGAGGCCTTCAAAATGATGCCGTGTTTAGCTGCTTCCAAAGACCCTTACTATCCAGTTTCTCATAGATGCTGCGATCAAGTCAGGAAATTAGGCCAAAGCACCAGCTGTCTCTGTGCCGTTATGTTGTCCAACACAGCTGCAATGGTTGGAGCTAAGCCTGAAATTGCTATCACCATTCCAAAACGTTGCAACATTGCTGAACGCCCTGTTGGCTACAACTGCGGAGGCTATGAACTACCTTGAAGCTGCATTCTCTGCTCCAACTATGTTGGAAGTTTAGGGGAGAAATCATATGTATTGTGCTTATTGTAAACCTATAGTGACTTACATCACTTGAGAAATAAATAAAAACATCGTGTTTGTCGTTAAAAAATTGTGTTCCGATGCATAATGGTAATTTTGTGCATCGTTGAGGGTTAAATGGTAATTTCGGTCAATATATAGTTTGACTTTTATAAAGTAAAAAAAAAAAAAAAAAAAAAAAAAANAAAAAAGGTAATTGGGAAGTTATTGGCAGTTTGCATTAAAAAAGAAAAAAAGGTTACATATTAATAATGTTTGTTTATGGAAAATAAAGGGGAGAAAATAGAAACGGCGATTATTTTAAATAATTTTCCATTTATGCCCATGCGGCGTTCTGTGCCACATGAAAGGCCGTCTTCAGTGCCTTTCCCTCCGTTTTTCCGTTTTCTTTTCGTTGGTTCTCTAAAATCCCTCGTCTTTCCTTAAAACTCGCTAATTAAATTTCTAAGAAGTTTCAAAAAATTCCTAATCCAATTTCCACTCTCCCTTCTTCCCAATCCATTCACCATTTTCTTTATGGTGTTAGGCTTGGAATTTGTTTAGGAATTTGATCAAATGGCTTACAAGGTGGATCACGAATACGATTATCTCTTCAAGATCGTTTTGATCGGTGATTCTGGCGTTGGAAAGTCCAACATTCTTTCCAGGTTTACGCGGAACGAGTTCTGTTTGGAGTCCAAATCCACAATTGGAGTTGAATTCGCTACGCGGACTTTGCAGGTAGAGGGGAAGACAGTGAAGGCCCAAATATGGGACACAGCAGGGCAAGAGAGATACCGAGCCATTACGAGTGCATATTACAGGGGAGCAGTGGGTGCACTTCTGGTATATGATATTACCAAGAGACAAACCTTTGACAATGTCCAAAGATGGCTACGCGAACTGAGAGACCATGCTGATTCCAACATCGTGATCATGATGGCCGGAAACAAGGCTGATCTGAACCATCTCCGGGCAGTTTCCGCGGAAGATGCTCAGGTATTGGCAGAGAAAGAAGGGCTGTCATTTCTAGAGACCTCAGCCTTGGAGGCCTTGAATGTGGAGAAGGCTTTTCAGACCATTTTGCTCGACATTTACCACATCATTAGCAAGAAAGCTTTGGCCGCTCAGGAAGCCGCTTCCACCCCCGGCATCCCTCACGGCACCACCATCAACGTCGCTAATATCTCAGGCAATTACAACAAGAGAACTTGTTGCTCTAATTGATCCAGTGATGATGATGATGATGATGATGGTTTGAGGGAAACAAAACAAAGGGGGCTGGTGGTAGGAACTTAAAAGGAAGAGTTTTTTTCCCCCCTTTTCTTTTTGTTGTTGTAAAAGGCACCATGAATAGAGAGAGATACCCTTTCATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTATAGATGGAAAAAACTCAGACTGCTTCTTCAATTTCTATAGGAACTTCTGTTTGTTTCTGTGGAAAATGGGAGATTTTTCATCCAGGATGTAGCTTCTTCGATTATTATTGTTATGATTATGATTTTGATTATTATTGTCATTCTTTTTTTAAATAAATTCTT

Coding sequence (CDS)

ATGGCTTACAAGGTGGATCACGAATACGATTATCTCTTCAAGATCGTTTTGATCGGTGATTCTGGCGTTGGAAAGTCCAACATTCTTTCCAGGTTTACGCGGAACGAGTTCTGTTTGGAGTCCAAATCCACAATTGGAGTTGAATTCGCTACGCGGACTTTGCAGGTAGAGGGGAAGACAGTGAAGGCCCAAATATGGGACACAGCAGGGCAAGAGAGATACCGAGCCATTACGAGTGCATATTACAGGGGAGCAGTGGGTGCACTTCTGGTATATGATATTACCAAGAGACAAACCTTTGACAATGTCCAAAGATGGCTACGCGAACTGAGAGACCATGCTGATTCCAACATCGTGATCATGATGGCCGGAAACAAGGCTGATCTGAACCATCTCCGGGCAGTTTCCGCGGAAGATGCTCAGGTATTGGCAGAGAAAGAAGGGCTGTCATTTCTAGAGACCTCAGCCTTGGAGGCCTTGAATGTGGAGAAGGCTTTTCAGACCATTTTGCTCGACATTTACCACATCATTAGCAAGAAAGCTTTGGCCGCTCAGGAAGCCGCTTCCACCCCCGGCATCCCTCACGGCACCACCATCAACGTCGCTAATATCTCAGGCAATTACAACAAGAGAACTTGTTGCTCTAATTGA

Protein sequence

MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASTPGIPHGTTINVANISGNYNKRTCCSN

Homology

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BLAST of Cp4.1LG01g25400 vs. ExPASy Swiss-Prot
Match: Q40193 (Ras-related protein Rab11C OS=Lotus japonicus OX=34305 GN=RAB11C PE=2 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 3.1e-100
Identity = 188/216 (87.04%), Postives = 200/216 (92.59%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           MA++VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1   MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           MMAGNK+DLNHLRAVS +D   L+EKEGLSFLETSALEA N+EKAFQTIL +IYHI+SKK
Sbjct: 121 MMAGNKSDLNHLRAVSEDDGGALSEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKK 180

Query: 181 ALAAQEAASTPGIP-HGTTINVANISGNYNKRTCCS 216
           ALAAQEA +   +P  GTTINVA+ SGN  K+ CCS
Sbjct: 181 ALAAQEATAGASVPGQGTTINVADTSGN-TKKGCCS 215

[Close]

BLAST of Cp4.1LG01g25400 vs. ExPASy Swiss-Prot
Match: Q39434 (Ras-related protein Rab2BV OS=Beta vulgaris OX=161934 GN=RAB2BV PE=2 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 3.1e-100
Identity = 192/216 (88.89%), Postives = 201/216 (93.06%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           MA +VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1   MANRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           MMAGNK+DL HLRAVS ED Q LAEKEGLSFLETSALEA+N+EKAFQTIL +IYHIISKK
Sbjct: 121 MMAGNKSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKK 180

Query: 181 ALAAQEAAST-PGIPHGTTINVANISGNYNKRTCCS 216
           ALAAQEA+S  PG   GTTINVA+ S N  +R+CCS
Sbjct: 181 ALAAQEASSNLPG--QGTTINVADASAN-QRRSCCS 213

[Close]

BLAST of Cp4.1LG01g25400 vs. ExPASy Swiss-Prot
Match: Q40523 (Ras-related protein Rab11A OS=Nicotiana tabacum OX=4097 GN=RAB11A PE=2 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 1.4e-97
Identity = 185/216 (85.65%), Postives = 198/216 (91.67%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           MA +VDHEYDYLFK+VLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1   MANRVDHEYDYLFKMVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALL YDITKRQTFDNVQRWLRELRDH DSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLFYDITKRQTFDNVQRWLRELRDHRDSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           ++AGNK+DL HLRAVS +D Q L +KEGLSFLETSALEALNV+KAFQTIL DIYHIISKK
Sbjct: 121 ILAGNKSDLKHLRAVSEQDDQALVKKEGLSFLETSALEALNVDKAFQTILTDIYHIISKK 180

Query: 181 ALAAQEAASTPGIP-HGTTINVANISGNYNKRTCCS 216
           ALAAQEAA++  +P  GTTINV++ S N  KR CCS
Sbjct: 181 ALAAQEAAASTALPGQGTTINVSDNSANV-KRGCCS 215

[Close]

BLAST of Cp4.1LG01g25400 vs. ExPASy Swiss-Prot
Match: Q9FIF9 (Ras-related protein RABA2d OS=Arabidopsis thaliana OX=3702 GN=RABA2D PE=2 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 2.7e-96
Identity = 186/217 (85.71%), Postives = 197/217 (90.78%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           MA++V+ +YDYLFKIVLIGDSGVGK+NILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1   MAHRVEQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNV RWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           MMAGNKADLNHLR+V+ ED Q LAE EGLSFLETSALEA NVEKAFQT+L +IYHIISKK
Sbjct: 121 MMAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKK 180

Query: 181 ALAAQE-AASTPGIP-HGTTINVANISGNYNKRTCCS 216
           ALAAQE AA+   IP  GTTINV + SG   KR CCS
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVEDTSG-AGKRGCCS 216

[Close]

BLAST of Cp4.1LG01g25400 vs. ExPASy Swiss-Prot
Match: Q96283 (Ras-related protein RABA2c OS=Arabidopsis thaliana OX=3702 GN=RABA2C PE=2 SV=4)

HSP 1 Score: 352.4 bits (903), Expect = 3.5e-96
Identity = 187/218 (85.78%), Postives = 197/218 (90.37%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           M ++VD EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRT QVEGKT
Sbjct: 1   MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           +KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNV RWLRELRDHADSNIVI
Sbjct: 61  IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           MMAGNK+DLNHLR+V+ ED Q LAEKEGLSFLETSALEA NVEKAFQTIL +IYHIISKK
Sbjct: 121 MMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKK 180

Query: 181 ALAAQE-AASTPGIP-HGTTINVANISGNYNKRTCCSN 217
           ALAAQE AA+   IP  GTTINV + SG   KR CCS+
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVDDTSGG-AKRACCSS 217

[Close]

BLAST of Cp4.1LG01g25400 vs. NCBI nr
Match: XP_022962630.1 (ras-related protein Rab2BV-like [Cucurbita moschata] >XP_023527214.1 ras-related protein Rab2BV-like [Cucurbita pepo subsp. pepo] >KAG6602642.1 Ras-related protein Rab2BV, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 425 bits (1093), Expect = 5.41e-150
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK
Sbjct: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180

Query: 181 ALAAQEAASTPGIPHGTTINVANISGNYNKRTCCSN 216
           ALAAQEAASTPGIPHGTTINVANISGNYNKRTCCSN
Sbjct: 181 ALAAQEAASTPGIPHGTTINVANISGNYNKRTCCSN 216

[Close]

BLAST of Cp4.1LG01g25400 vs. NCBI nr
Match: XP_022990563.1 (ras-related protein Rab2BV-like [Cucurbita maxima])

HSP 1 Score: 425 bits (1093), Expect = 8.64e-150
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 14  MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 73

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI
Sbjct: 74  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 133

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK
Sbjct: 134 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 193

Query: 181 ALAAQEAASTPGIPHGTTINVANISGNYNKRTCCSN 216
           ALAAQEAASTPGIPHGTTINVANISGNYNKRTCCSN
Sbjct: 194 ALAAQEAASTPGIPHGTTINVANISGNYNKRTCCSN 229

[Close]

BLAST of Cp4.1LG01g25400 vs. NCBI nr
Match: XP_022993834.1 (ras-related protein Rab2BV-like [Cucurbita maxima] >XP_022993835.1 ras-related protein Rab2BV-like [Cucurbita maxima])

HSP 1 Score: 424 bits (1089), Expect = 2.20e-149
Identity = 215/216 (99.54%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK
Sbjct: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180

Query: 181 ALAAQEAASTPGIPHGTTINVANISGNYNKRTCCSN 216
           ALAAQEAASTPGIPHGTTINVANISGNYNKR+CCSN
Sbjct: 181 ALAAQEAASTPGIPHGTTINVANISGNYNKRSCCSN 216

[Close]

BLAST of Cp4.1LG01g25400 vs. NCBI nr
Match: XP_022938534.1 (ras-related protein Rab2BV-like [Cucurbita moschata] >XP_022938535.1 ras-related protein Rab2BV-like [Cucurbita moschata] >XP_023549819.1 ras-related protein Rab2BV-like [Cucurbita pepo subsp. pepo] >XP_023549820.1 ras-related protein Rab2BV-like [Cucurbita pepo subsp. pepo] >KAG6578429.1 Ras-related protein Rab2BV, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015992.1 Ras-related protein Rab2BV [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 423 bits (1087), Expect = 4.45e-149
Identity = 214/216 (99.07%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK
Sbjct: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180

Query: 181 ALAAQEAASTPGIPHGTTINVANISGNYNKRTCCSN 216
           ALAAQEAASTPG+PHGTTINVANISGNYNKR+CCSN
Sbjct: 181 ALAAQEAASTPGLPHGTTINVANISGNYNKRSCCSN 216

[Close]

BLAST of Cp4.1LG01g25400 vs. NCBI nr
Match: XP_022134462.1 (ras-related protein Rab2BV-like [Momordica charantia] >XP_022134463.1 ras-related protein Rab2BV-like [Momordica charantia])

HSP 1 Score: 422 bits (1085), Expect = 8.97e-149
Identity = 213/216 (98.61%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK
Sbjct: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180

Query: 181 ALAAQEAASTPGIPHGTTINVANISGNYNKRTCCSN 216
           ALAAQEAASTPG+PHGTTINVAN+SGNYNKR+CCSN
Sbjct: 181 ALAAQEAASTPGLPHGTTINVANLSGNYNKRSCCSN 216

[Close]

BLAST of Cp4.1LG01g25400 vs. ExPASy TrEMBL
Match: A0A6J1HFM9 (ras-related protein Rab2BV-like OS=Cucurbita moschata OX=3662 GN=LOC111463036 PE=4 SV=1)

HSP 1 Score: 425 bits (1093), Expect = 2.62e-150
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK
Sbjct: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180

Query: 181 ALAAQEAASTPGIPHGTTINVANISGNYNKRTCCSN 216
           ALAAQEAASTPGIPHGTTINVANISGNYNKRTCCSN
Sbjct: 181 ALAAQEAASTPGIPHGTTINVANISGNYNKRTCCSN 216

[Close]

BLAST of Cp4.1LG01g25400 vs. ExPASy TrEMBL
Match: A0A6J1JTM8 (ras-related protein Rab2BV-like OS=Cucurbita maxima OX=3661 GN=LOC111487405 PE=4 SV=1)

HSP 1 Score: 425 bits (1093), Expect = 4.19e-150
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 14  MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 73

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI
Sbjct: 74  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 133

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK
Sbjct: 134 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 193

Query: 181 ALAAQEAASTPGIPHGTTINVANISGNYNKRTCCSN 216
           ALAAQEAASTPGIPHGTTINVANISGNYNKRTCCSN
Sbjct: 194 ALAAQEAASTPGIPHGTTINVANISGNYNKRTCCSN 229

[Close]

BLAST of Cp4.1LG01g25400 vs. ExPASy TrEMBL
Match: A0A6J1K193 (ras-related protein Rab2BV-like OS=Cucurbita maxima OX=3661 GN=LOC111489726 PE=4 SV=1)

HSP 1 Score: 424 bits (1089), Expect = 1.07e-149
Identity = 215/216 (99.54%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK
Sbjct: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180

Query: 181 ALAAQEAASTPGIPHGTTINVANISGNYNKRTCCSN 216
           ALAAQEAASTPGIPHGTTINVANISGNYNKR+CCSN
Sbjct: 181 ALAAQEAASTPGIPHGTTINVANISGNYNKRSCCSN 216

[Close]

BLAST of Cp4.1LG01g25400 vs. ExPASy TrEMBL
Match: A0A6J1FEC9 (ras-related protein Rab2BV-like OS=Cucurbita moschata OX=3662 GN=LOC111444743 PE=4 SV=1)

HSP 1 Score: 423 bits (1087), Expect = 2.15e-149
Identity = 214/216 (99.07%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK
Sbjct: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180

Query: 181 ALAAQEAASTPGIPHGTTINVANISGNYNKRTCCSN 216
           ALAAQEAASTPG+PHGTTINVANISGNYNKR+CCSN
Sbjct: 181 ALAAQEAASTPGLPHGTTINVANISGNYNKRSCCSN 216

[Close]

BLAST of Cp4.1LG01g25400 vs. ExPASy TrEMBL
Match: A0A6J1C222 (ras-related protein Rab2BV-like OS=Momordica charantia OX=3673 GN=LOC111006701 PE=4 SV=1)

HSP 1 Score: 422 bits (1085), Expect = 4.34e-149
Identity = 213/216 (98.61%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK
Sbjct: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180

Query: 181 ALAAQEAASTPGIPHGTTINVANISGNYNKRTCCSN 216
           ALAAQEAASTPG+PHGTTINVAN+SGNYNKR+CCSN
Sbjct: 181 ALAAQEAASTPGLPHGTTINVANLSGNYNKRSCCSN 216

[Close]

BLAST of Cp4.1LG01g25400 vs. TAIR 10
Match: AT5G59150.1 (RAB GTPase homolog A2D )

HSP 1 Score: 352.8 bits (904), Expect = 1.9e-97
Identity = 186/217 (85.71%), Postives = 197/217 (90.78%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           MA++V+ +YDYLFKIVLIGDSGVGK+NILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1   MAHRVEQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNV RWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           MMAGNKADLNHLR+V+ ED Q LAE EGLSFLETSALEA NVEKAFQT+L +IYHIISKK
Sbjct: 121 MMAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKK 180

Query: 181 ALAAQE-AASTPGIP-HGTTINVANISGNYNKRTCCS 216
           ALAAQE AA+   IP  GTTINV + SG   KR CCS
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVEDTSG-AGKRGCCS 216

[Close]

BLAST of Cp4.1LG01g25400 vs. TAIR 10
Match: AT3G46830.1 (RAB GTPase homolog A2C )

HSP 1 Score: 352.4 bits (903), Expect = 2.5e-97
Identity = 187/218 (85.78%), Postives = 197/218 (90.37%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           M ++VD EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRT QVEGKT
Sbjct: 1   MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           +KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNV RWLRELRDHADSNIVI
Sbjct: 61  IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           MMAGNK+DLNHLR+V+ ED Q LAEKEGLSFLETSALEA NVEKAFQTIL +IYHIISKK
Sbjct: 121 MMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKK 180

Query: 181 ALAAQE-AASTPGIP-HGTTINVANISGNYNKRTCCSN 217
           ALAAQE AA+   IP  GTTINV + SG   KR CCS+
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVDDTSGG-AKRACCSS 217

[Close]

BLAST of Cp4.1LG01g25400 vs. TAIR 10
Match: AT1G07410.1 (RAB GTPase homolog A2B )

HSP 1 Score: 350.9 bits (899), Expect = 7.3e-97
Identity = 183/216 (84.72%), Postives = 198/216 (91.67%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           MA ++DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1   MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTF+NV RWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           MMAGNK+DLNHLR+V+ ED + LAEKEGLSFLETSALEA N+EKAFQTIL +IYHIISKK
Sbjct: 121 MMAGNKSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKK 180

Query: 181 ALAAQEAA-STPGIPHGTTINVANISGNYNKRTCCS 216
           ALAAQEAA + PG   GT IN+++ S   N++ CCS
Sbjct: 181 ALAAQEAAGNLPG--QGTAINISDSSAT-NRKGCCS 213

[Close]

BLAST of Cp4.1LG01g25400 vs. TAIR 10
Match: AT1G09630.1 (RAB GTPase 11C )

HSP 1 Score: 327.8 bits (839), Expect = 6.6e-90
Identity = 164/216 (75.93%), Postives = 187/216 (86.57%), Query Frame = 0


Query: 1   MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
           MA + D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TF+NV RWL+ELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120

Query: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
           M+ GNK DL HLRAV+ EDAQ  AEKEGLSF+ETSALEALNVEKAFQTIL ++Y IISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKK 180

Query: 181 ALAAQEAASTPGIPHGTTINVANISGNYNKRTCCSN 217
           ++++ +  +   I  G TI+VA  S +  K+ CCS+
Sbjct: 181 SISSDQTTANANIKEGQTIDVAATSESNAKKPCCSS 216

[Close]

BLAST of Cp4.1LG01g25400 vs. TAIR 10
Match: AT5G60860.1 (RAB GTPase homolog A1F )

HSP 1 Score: 288.5 bits (737), Expect = 4.4e-78
Identity = 147/217 (67.74%), Postives = 171/217 (78.80%), Query Frame = 0


Query: 2   AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
           AY+ D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++ V+ K V
Sbjct: 3   AYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIV 62

Query: 62  KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIM 121
           KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+  TF+NV+RWL+ELRDH D+NIVIM
Sbjct: 63  KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIM 122

Query: 122 MAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
             GNKADL HLRAVS EDA+  AE+E   F+ETSALE++NVE AF  +L  IY ++S+KA
Sbjct: 123 FVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKA 182

Query: 182 LAAQEAASTPGIPHGTTINVANIS--GNYNKRTCCSN 217
           L   +      +P G TINV +        K  CCSN
Sbjct: 183 LDIGD--DPAALPKGQTINVGSKDDVSAVKKVGCCSN 217

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g25400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q40193	3.1e-100	87.04	Ras-related protein Rab11C OS=Lotus japonicus OX=34305 GN=RAB11C PE=2 SV=1	[more]
Q39434	3.1e-100	88.89	Ras-related protein Rab2BV OS=Beta vulgaris OX=161934 GN=RAB2BV PE=2 SV=1	[more]
Q40523	1.4e-97	85.65	Ras-related protein Rab11A OS=Nicotiana tabacum OX=4097 GN=RAB11A PE=2 SV=1	[more]
Q9FIF9	2.7e-96	85.71	Ras-related protein RABA2d OS=Arabidopsis thaliana OX=3702 GN=RABA2D PE=2 SV=1	[more]
Q96283	3.5e-96	85.78	Ras-related protein RABA2c OS=Arabidopsis thaliana OX=3702 GN=RABA2C PE=2 SV=4	[more]

BLAST of Cp4.1LG01g25400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022962630.1	5.41e-150	100.00	ras-related protein Rab2BV-like [Cucurbita moschata] >XP_023527214.1 ras-related...	[more]
XP_022990563.1	8.64e-150	100.00	ras-related protein Rab2BV-like [Cucurbita maxima]	[more]
XP_022993834.1	2.20e-149	99.54	ras-related protein Rab2BV-like [Cucurbita maxima] >XP_022993835.1 ras-related p...	[more]
XP_022938534.1	4.45e-149	99.07	ras-related protein Rab2BV-like [Cucurbita moschata] >XP_022938535.1 ras-related...	[more]
XP_022134462.1	8.97e-149	98.61	ras-related protein Rab2BV-like [Momordica charantia] >XP_022134463.1 ras-relate...	[more]

BLAST of Cp4.1LG01g25400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HFM9	2.62e-150	100.00	ras-related protein Rab2BV-like OS=Cucurbita moschata OX=3662 GN=LOC111463036 PE...	[more]
A0A6J1JTM8	4.19e-150	100.00	ras-related protein Rab2BV-like OS=Cucurbita maxima OX=3661 GN=LOC111487405 PE=4...	[more]
A0A6J1K193	1.07e-149	99.54	ras-related protein Rab2BV-like OS=Cucurbita maxima OX=3661 GN=LOC111489726 PE=4...	[more]
A0A6J1FEC9	2.15e-149	99.07	ras-related protein Rab2BV-like OS=Cucurbita moschata OX=3662 GN=LOC111444743 PE...	[more]
A0A6J1C222	4.34e-149	98.61	ras-related protein Rab2BV-like OS=Momordica charantia OX=3673 GN=LOC111006701 P...	[more]

BLAST of Cp4.1LG01g25400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59150.1	1.9e-97	85.71	RAB GTPase homolog A2D	[more]
AT3G46830.1	2.5e-97	85.78	RAB GTPase homolog A2C	[more]
AT1G07410.1	7.3e-97	84.72	RAB GTPase homolog A2B	[more]
AT1G09630.1	6.6e-90	75.93	RAB GTPase 11C	[more]
AT5G60860.1	4.4e-78	67.74	RAB GTPase homolog A1F	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 54..76 score: 53.54 coord: 13..34 score: 52.05 coord: 151..173 score: 42.31 coord: 36..52 score: 36.23 coord: 116..129 score: 44.56
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 1..185 e-value: 0.0071 score: -2.4
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 13..176 e-value: 1.1E-111 score: 387.0
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 18..213 e-value: 1.1E-8 score: 44.8
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 10..176 e-value: 1.4E-27 score: 107.6
None	No IPR available	PANTHER	PTHR47978:SF7	RAS-RELATED PROTEIN RAB11C-LIKE	coord: 1..216
None	No IPR available	PANTHER	PTHR47978	FAMILY NOT NAMED	coord: 1..216
None	No IPR available	PROSITE	PS51420	RHO	coord: 6..174 score: 8.925133
None	No IPR available	PROSITE	PS51419	RAB	coord: 8..214 score: 35.462921
None	No IPR available	CDD	cd01868	Rab11_like	coord: 10..174 e-value: 8.30195E-127 score: 353.018
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 15..172 e-value: 1.3E-10 score: 16.5
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 14..173 e-value: 1.2E-60 score: 203.8
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 1..202 score: 16.158184
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 11..169 e-value: 1.3E-39 score: 133.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 5..214 e-value: 3.0E-72 score: 244.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 8..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g25400.1	Cp4.1LG01g25400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005768	endosome
cellular_component	GO:0005794	Golgi apparatus
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding