Cp4.1LG01g25280 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g25280
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	WUSCHEL-related homeobox 5-like
Location	Cp4.1LG01: 20715580 .. 20716017 (+)
RNA-Seq Expression	Cp4.1LG01g25280
Synteny	Cp4.1LG01g25280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGAAGGGATTTCTTCAAGATTTTATGTAAAACCGGCAGGAGGCGGCGGAGACGGTGGTGGAGTGGCCGGAAAAGGGAGTATGAGCAGTAAATGTGGGAGATGGAATCCAACAGCAGAGCAAGTAAAAGTGCTGACAGAGTTGTTCAGGTCAGGGCTTAGAACTCCGAGTAGCGATCAGATTCAGAAAATATCTCATCAGCTCAGCTTTTACGGCAAGATCGAGAGCAAAAATGTGTTCTACTGGTTTCAGAATCATAAAGCTCGGGAAAGACAAAAACGTCGCAAAGTTTCTATTTCTCTTGATCACACTCATCATCATCATCATCGTCAACAACAACAACAACAACAACACTTCATTCTTCCACCTTGTTCTAACTGTATGTTCCTTGTTTCTCATTTCCTTTTATCAATTTCTGCCTCTAAAATAACATAA

mRNA sequence

ATGGACGAAGGGATTTCTTCAAGATTTTATGTAAAACCGGCAGGAGGCGGCGGAGACGGTGGTGGAGTGGCCGGAAAAGGGAGTATGAGCAGTAAATGTGGGAGATGGAATCCAACAGCAGAGCAAGTAAAAGTGCTGACAGAGTTGTTCAGGTCAGGGCTTAGAACTCCGAGTAGCGATCAGATTCAGAAAATATCTCATCAGCTCAGCTTTTACGGCAAGATCGAGAGCAAAAATGTGTTCTACTGGTTTCAGAATCATAAAGCTCGGGAAAGACAAAAACGTCGCAAAGTTTCTATTTCTCTTGATCACACTCATCATCATCATCATCGTCAACAACAACAACAACAACAACACTTCATTCTTCCACCTTGTTCTAACTGTATGTTCCTTGTTTCTCATTTCCTTTTATCAATTTCTGCCTCTAAAATAACATAA

Coding sequence (CDS)

ATGGACGAAGGGATTTCTTCAAGATTTTATGTAAAACCGGCAGGAGGCGGCGGAGACGGTGGTGGAGTGGCCGGAAAAGGGAGTATGAGCAGTAAATGTGGGAGATGGAATCCAACAGCAGAGCAAGTAAAAGTGCTGACAGAGTTGTTCAGGTCAGGGCTTAGAACTCCGAGTAGCGATCAGATTCAGAAAATATCTCATCAGCTCAGCTTTTACGGCAAGATCGAGAGCAAAAATGTGTTCTACTGGTTTCAGAATCATAAAGCTCGGGAAAGACAAAAACGTCGCAAAGTTTCTATTTCTCTTGATCACACTCATCATCATCATCATCGTCAACAACAACAACAACAACAACACTTCATTCTTCCACCTTGTTCTAACTGTATGTTCCTTGTTTCTCATTTCCTTTTATCAATTTCTGCCTCTAAAATAACATAA

Protein sequence

MDEGISSRFYVKPAGGGGDGGGVAGKGSMSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSISLDHTHHHHHRQQQQQQQHFILPPCSNCMFLVSHFLLSISASKIT

Homology

[Close]

BLAST of Cp4.1LG01g25280 vs. ExPASy Swiss-Prot
Match: Q8H1D2 (WUSCHEL-related homeobox 5 OS=Arabidopsis thaliana OX=3702 GN=WOX5 PE=2 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.4e-32
Identity = 64/81 (79.01%), Postives = 73/81 (90.12%), Query Frame = 0


Query: 27  GSMSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHQLSFYGKIESKNVFYWFQN 86
           G   +KCGRWNPT EQ+K+LT+LFR+GLRTP++DQIQKIS +LSFYGKIESKNVFYWFQN
Sbjct: 16  GGTGTKCGRWNPTVEQLKILTDLFRAGLRTPTTDQIQKISTELSFYGKIESKNVFYWFQN 75

Query: 87  HKARERQKRRKVSISLDHTHH 108
           HKARERQKRRK+SI  DH HH
Sbjct: 76  HKARERQKRRKISIDFDHHHH 96

[Close]

BLAST of Cp4.1LG01g25280 vs. ExPASy Swiss-Prot
Match: Q9FFK0 (WUSCHEL-related homeobox 7 OS=Arabidopsis thaliana OX=3702 GN=WOX7 PE=2 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.2e-28
Identity = 69/102 (67.65%), Postives = 81/102 (79.41%), Query Frame = 0


Query: 5   ISSR-FYVKPAGGGGDGGGVAGKGSMSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQ 64
           +SSR F +K  G   +  G  G G   +KCGRWNPT EQVK+LT+LF++GLRTPS+DQIQ
Sbjct: 1   MSSRGFNIKARGLCNNNNGGGGTG---AKCGRWNPTVEQVKLLTDLFKAGLRTPSTDQIQ 60

Query: 65  KISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVS-ISLDH 105
           KIS +LSFYGKIESKNVFYWFQNHKARERQK RK+S +  DH
Sbjct: 61  KISMELSFYGKIESKNVFYWFQNHKARERQKCRKISTVKFDH 99

[Close]

BLAST of Cp4.1LG01g25280 vs. ExPASy Swiss-Prot
Match: Q8W0F1 (WUSCHEL-related homeobox 9 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX9 PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.2e-25
Identity = 58/80 (72.50%), Postives = 68/80 (85.00%), Query Frame = 0


Query: 27  GSMSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHQLSFYGKIESKNVFYWFQN 86
           G +  KCGRWNPTAEQVKVLTELFR+GLRTPS++QIQ+IS  LS +GK+ESKNVFYWFQN
Sbjct: 6   GRVGVKCGRWNPTAEQVKVLTELFRAGLRTPSTEQIQRISTHLSAFGKVESKNVFYWFQN 65

Query: 87  HKARER---QKRRKVSISLD 104
           HKARER   +KRR+ + S D
Sbjct: 66  HKARERHHHKKRRRGASSPD 85

[Close]

BLAST of Cp4.1LG01g25280 vs. ExPASy Swiss-Prot
Match: A2XZR3 (Putative WUSCHEL-related homeobox 2 OS=Oryza sativa subsp. indica OX=39946 GN=WOX2 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.1e-19
Identity = 56/101 (55.45%), Postives = 72/101 (71.29%), Query Frame = 0


Query: 14  AGGGGDGGGVAGKGSMSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHQLSFYG 73
           +GGGG   G A  GS +    RW PT EQ+ +L E++R GLRTP++ QIQ+I+  LS YG
Sbjct: 10  SGGGGGSTGAAAVGSTT----RWCPTPEQLMMLEEMYRGGLRTPNAAQIQQITAHLSTYG 69

Query: 74  KIESKNVFYWFQNHKARERQK-RRKVSIS---LDHTHHHHH 111
           +IE KNVFYWFQNHKAR+RQK RR++ IS   L   H++HH
Sbjct: 70  RIEGKNVFYWFQNHKARDRQKLRRRLCISHHLLSCAHYYHH 106

[Close]

BLAST of Cp4.1LG01g25280 vs. ExPASy Swiss-Prot
Match: Q5W7C3 (Putative WUSCHEL-related homeobox 2 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX2 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.1e-19
Identity = 56/101 (55.45%), Postives = 72/101 (71.29%), Query Frame = 0


Query: 14  AGGGGDGGGVAGKGSMSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHQLSFYG 73
           +GGGG   G A  GS +    RW PT EQ+ +L E++R GLRTP++ QIQ+I+  LS YG
Sbjct: 10  SGGGGGSTGAAAVGSTT----RWCPTPEQLMMLEEMYRGGLRTPNAAQIQQITAHLSTYG 69

Query: 74  KIESKNVFYWFQNHKARERQK-RRKVSIS---LDHTHHHHH 111
           +IE KNVFYWFQNHKAR+RQK RR++ IS   L   H++HH
Sbjct: 70  RIEGKNVFYWFQNHKARDRQKLRRRLCISHHLLSCAHYYHH 106

[Close]

BLAST of Cp4.1LG01g25280 vs. NCBI nr
Match: XP_023545185.1 (WUSCHEL-related homeobox 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 257 bits (656), Expect = 9.91e-85
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 1   MDEGISSRFYVKPAGGGGDGGGVAGKGSMSSKCGRWNPTAEQVKVLTELFRSGLRTPSSD 60
           MDEGISSRFYVKPAGGGGDGGGVAGKGSMSSKCGRWNPTAEQVKVLTELFRSGLRTPSSD
Sbjct: 7   MDEGISSRFYVKPAGGGGDGGGVAGKGSMSSKCGRWNPTAEQVKVLTELFRSGLRTPSSD 66

Query: 61  QIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSISLDHTHHHHHRQQQQQQQHF 120
           QIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSISLDHTHHHHHRQQQQQQQHF
Sbjct: 67  QIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSISLDHTHHHHHRQQQQQQQHF 126

Query: 121 ILPPCSN 127
           ILPPCSN
Sbjct: 127 ILPPCSN 133

[Close]

BLAST of Cp4.1LG01g25280 vs. NCBI nr
Match: KAG6602625.1 (WUSCHEL-related homeobox 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 246 bits (627), Expect = 2.41e-80
Identity = 123/127 (96.85%), Postives = 124/127 (97.64%), Query Frame = 0


Query: 1   MDEGISSRFYVKPAGGGGDGGGVAGKGSMSSKCGRWNPTAEQVKVLTELFRSGLRTPSSD 60
           MDEGISSRFYVKPAGGGGDGGG+AGKGSMSSKCGRWNPTAEQVKVLTELFRSGLRTPSSD
Sbjct: 7   MDEGISSRFYVKPAGGGGDGGGMAGKGSMSSKCGRWNPTAEQVKVLTELFRSGLRTPSSD 66

Query: 61  QIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSISLDHTHHHHHRQQQQQQQHF 120
           QIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSISLDHTHHHHH QQQ  QQHF
Sbjct: 67  QIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSISLDHTHHHHHHQQQ--QQHF 126

Query: 121 ILPPCSN 127
           ILPPCSN
Sbjct: 127 ILPPCSN 131

[Close]

BLAST of Cp4.1LG01g25280 vs. NCBI nr
Match: XP_022953411.1 (WUSCHEL-related homeobox 5-like [Cucurbita moschata])

HSP 1 Score: 245 bits (625), Expect = 4.69e-80
Identity = 123/127 (96.85%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 1   MDEGISSRFYVKPAGGGGDGGGVAGKGSMSSKCGRWNPTAEQVKVLTELFRSGLRTPSSD 60
           MDEGISSRFYVKPAGGGGDGGGVAGKGSMSSKCGRWNPTAEQVKVLTELFRSGLRTPSSD
Sbjct: 7   MDEGISSRFYVKPAGGGGDGGGVAGKGSMSSKCGRWNPTAEQVKVLTELFRSGLRTPSSD 66

Query: 61  QIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSISLDHTHHHHHRQQQQQQQHF 120
           QIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSISLDHTHHHHH QQ   QQHF
Sbjct: 67  QIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSISLDHTHHHHHHQQ---QQHF 126

Query: 121 ILPPCSN 127
           ILPPCSN
Sbjct: 127 ILPPCSN 130

[Close]

BLAST of Cp4.1LG01g25280 vs. NCBI nr
Match: KAG7033309.1 (WUSCHEL-related homeobox 5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 242 bits (617), Expect = 5.74e-79
Identity = 121/127 (95.28%), Postives = 122/127 (96.06%), Query Frame = 0


Query: 1   MDEGISSRFYVKPAGGGGDGGGVAGKGSMSSKCGRWNPTAEQVKVLTELFRSGLRTPSSD 60
           MDEGISSRFYVKPAGGGGDGGG+AGKGSMSSKCGRWNPTAEQVKVLTELFRSGLRTPSSD
Sbjct: 1   MDEGISSRFYVKPAGGGGDGGGMAGKGSMSSKCGRWNPTAEQVKVLTELFRSGLRTPSSD 60

Query: 61  QIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSISLDHTHHHHHRQQQQQQQHF 120
           QIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSISLDHTHHHHH  Q   QQHF
Sbjct: 61  QIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSISLDHTHHHHHHHQ---QQHF 120

Query: 121 ILPPCSN 127
           ILPPCSN
Sbjct: 121 ILPPCSN 124

[Close]

BLAST of Cp4.1LG01g25280 vs. NCBI nr
Match: XP_022990545.1 (WUSCHEL-related homeobox 5-like [Cucurbita maxima])

HSP 1 Score: 241 bits (614), Expect = 2.14e-78
Identity = 121/127 (95.28%), Postives = 121/127 (95.28%), Query Frame = 0


Query: 1   MDEGISSRFYVKPAGGGGDGGGVAGKGSMSSKCGRWNPTAEQVKVLTELFRSGLRTPSSD 60
           MDEGISSRFYVKPAGGGGDGGGVAGKGSMSSKCGRWNPTAEQVKVLTELF SGLRTPSSD
Sbjct: 7   MDEGISSRFYVKPAGGGGDGGGVAGKGSMSSKCGRWNPTAEQVKVLTELFMSGLRTPSSD 66

Query: 61  QIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSISLDHTHHHHHRQQQQQQQHF 120
           QIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVS SLDHTHHHHH    QQQQHF
Sbjct: 67  QIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSTSLDHTHHHHH----QQQQHF 126

Query: 121 ILPPCSN 127
           ILPPCSN
Sbjct: 127 ILPPCSN 129

[Close]

BLAST of Cp4.1LG01g25280 vs. ExPASy TrEMBL
Match: A0A6J1GMY2 (WUSCHEL-related homeobox 5-like OS=Cucurbita moschata OX=3662 GN=LOC111455970 PE=3 SV=1)

HSP 1 Score: 245 bits (625), Expect = 2.27e-80
Identity = 123/127 (96.85%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 1   MDEGISSRFYVKPAGGGGDGGGVAGKGSMSSKCGRWNPTAEQVKVLTELFRSGLRTPSSD 60
           MDEGISSRFYVKPAGGGGDGGGVAGKGSMSSKCGRWNPTAEQVKVLTELFRSGLRTPSSD
Sbjct: 7   MDEGISSRFYVKPAGGGGDGGGVAGKGSMSSKCGRWNPTAEQVKVLTELFRSGLRTPSSD 66

Query: 61  QIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSISLDHTHHHHHRQQQQQQQHF 120
           QIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSISLDHTHHHHH QQ   QQHF
Sbjct: 67  QIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSISLDHTHHHHHHQQ---QQHF 126

Query: 121 ILPPCSN 127
           ILPPCSN
Sbjct: 127 ILPPCSN 130

[Close]

BLAST of Cp4.1LG01g25280 vs. ExPASy TrEMBL
Match: A0A6J1JQD8 (WUSCHEL-related homeobox 5-like OS=Cucurbita maxima OX=3661 GN=LOC111487393 PE=3 SV=1)

HSP 1 Score: 241 bits (614), Expect = 1.04e-78
Identity = 121/127 (95.28%), Postives = 121/127 (95.28%), Query Frame = 0


Query: 1   MDEGISSRFYVKPAGGGGDGGGVAGKGSMSSKCGRWNPTAEQVKVLTELFRSGLRTPSSD 60
           MDEGISSRFYVKPAGGGGDGGGVAGKGSMSSKCGRWNPTAEQVKVLTELF SGLRTPSSD
Sbjct: 7   MDEGISSRFYVKPAGGGGDGGGVAGKGSMSSKCGRWNPTAEQVKVLTELFMSGLRTPSSD 66

Query: 61  QIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSISLDHTHHHHHRQQQQQQQHF 120
           QIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVS SLDHTHHHHH    QQQQHF
Sbjct: 67  QIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSTSLDHTHHHHH----QQQQHF 126

Query: 121 ILPPCSN 127
           ILPPCSN
Sbjct: 127 ILPPCSN 129

[Close]

BLAST of Cp4.1LG01g25280 vs. ExPASy TrEMBL
Match: A0A6J1JWK4 (WUSCHEL-related homeobox 5-like OS=Cucurbita maxima OX=3661 GN=LOC111489507 PE=3 SV=1)

HSP 1 Score: 185 bits (470), Expect = 9.11e-57
Identity = 94/111 (84.68%), Postives = 100/111 (90.09%), Query Frame = 0


Query: 1   MDEGISSRFYVKPAGGGGDGGGVAG-KGSMSSKCGRWNPTAEQVKVLTELFRSGLRTPSS 60
           M++G+ SR YVK  G GG+GGG  G KGS SSKCGRWNPTAEQVKVLTELFRSGLRTPSS
Sbjct: 1   MEDGVCSRIYVKGGGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSS 60

Query: 61  DQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSISLDHTHHHHH 110
           DQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVS+SLDH+H H H
Sbjct: 61  DQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSHQHQH 111

[Close]

BLAST of Cp4.1LG01g25280 vs. ExPASy TrEMBL
Match: A0A6J1FH52 (WUSCHEL-related homeobox 5-like OS=Cucurbita moschata OX=3662 GN=LOC111445643 PE=3 SV=1)

HSP 1 Score: 184 bits (468), Expect = 2.27e-56
Identity = 97/124 (78.23%), Postives = 104/124 (83.87%), Query Frame = 0


Query: 1   MDEGISSRFYVKPAGGGGDGGGVAG-KGSMSSKCGRWNPTAEQVKVLTELFRSGLRTPSS 60
           M++G+ SR YVK  G  G+GGG  G KGS SSKCGRWNPTAEQVKVLTELFRSGLRTPSS
Sbjct: 8   MEDGVCSRIYVKGGGCSGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSS 67

Query: 61  DQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSISLDHTHHHHHRQQQQQQQH 120
           DQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVS+SLDH+H         QQQH
Sbjct: 68  DQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSH---------QQQH 122

Query: 121 FILP 123
           F+ P
Sbjct: 128 FLHP 122

[Close]

BLAST of Cp4.1LG01g25280 vs. ExPASy TrEMBL
Match: A0A0A0KAB0 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G010010 PE=3 SV=1)

HSP 1 Score: 179 bits (453), Expect = 2.69e-55
Identity = 95/128 (74.22%), Postives = 101/128 (78.91%), Query Frame = 0


Query: 1   MDEGISSRFYVKPAGG-GGDGGGVAGKGSMSSKCGRWNPTAEQVKVLTELFRSGLRTPSS 60
           M++G+ SR YVK  GG  G+ GG  GKGS SSKCGRWNPTAEQVKVLTELFRSGLRTPSS
Sbjct: 1   MEDGVCSRIYVKGGGGCSGESGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSS 60

Query: 61  DQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSISLDHTHHHHHRQQQQQQQH 120
           DQIQKISH LSFYGKIESKNVFYWFQNHKARERQKRRK+S+               QQQH
Sbjct: 61  DQIQKISHHLSFYGKIESKNVFYWFQNHKARERQKRRKLSLP--------------QQQH 114

Query: 121 FILPPCSN 127
           FILPP SN
Sbjct: 121 FILPPSSN 114

[Close]

BLAST of Cp4.1LG01g25280 vs. TAIR 10
Match: AT3G11260.1 (WUSCHEL related homeobox 5 )

HSP 1 Score: 140.6 bits (353), Expect = 1.0e-33
Identity = 64/81 (79.01%), Postives = 73/81 (90.12%), Query Frame = 0


Query: 27  GSMSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHQLSFYGKIESKNVFYWFQN 86
           G   +KCGRWNPT EQ+K+LT+LFR+GLRTP++DQIQKIS +LSFYGKIESKNVFYWFQN
Sbjct: 16  GGTGTKCGRWNPTVEQLKILTDLFRAGLRTPTTDQIQKISTELSFYGKIESKNVFYWFQN 75

Query: 87  HKARERQKRRKVSISLDHTHH 108
           HKARERQKRRK+SI  DH HH
Sbjct: 76  HKARERQKRRKISIDFDHHHH 96

[Close]

BLAST of Cp4.1LG01g25280 vs. TAIR 10
Match: AT5G05770.1 (WUSCHEL related homeobox 7 )

HSP 1 Score: 127.5 bits (319), Expect = 8.8e-30
Identity = 69/102 (67.65%), Postives = 81/102 (79.41%), Query Frame = 0


Query: 5   ISSR-FYVKPAGGGGDGGGVAGKGSMSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQ 64
           +SSR F +K  G   +  G  G G   +KCGRWNPT EQVK+LT+LF++GLRTPS+DQIQ
Sbjct: 1   MSSRGFNIKARGLCNNNNGGGGTG---AKCGRWNPTVEQVKLLTDLFKAGLRTPSTDQIQ 60

Query: 65  KISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVS-ISLDH 105
           KIS +LSFYGKIESKNVFYWFQNHKARERQK RK+S +  DH
Sbjct: 61  KISMELSFYGKIESKNVFYWFQNHKARERQKCRKISTVKFDH 99

[Close]

BLAST of Cp4.1LG01g25280 vs. TAIR 10
Match: AT3G18010.1 (WUSCHEL related homeobox 1 )

HSP 1 Score: 99.8 bits (247), Expect = 2.0e-21
Identity = 46/63 (73.02%), Postives = 54/63 (85.71%), Query Frame = 0


Query: 35  RWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHQLSFYGKIESKNVFYWFQNHKARERQK 94
           RWNPT +Q++VL EL+R G RTPS+D IQ+I+ QL  YGKIE KNVFYWFQNHKARERQK
Sbjct: 76  RWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKARERQK 135

Query: 95  RRK 98
           RR+
Sbjct: 136 RRR 138

[Close]

BLAST of Cp4.1LG01g25280 vs. TAIR 10
Match: AT2G28610.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 94.7 bits (234), Expect = 6.3e-20
Identity = 47/82 (57.32%), Postives = 60/82 (73.17%), Query Frame = 0


Query: 35  RWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHQLSFYGKIESKNVFYWFQNHKARERQK 94
           RW PT EQ+ +L E++RSG+RTP++ QIQ+I+  L+FYG+IE KNVFYWFQNHKAR+RQK
Sbjct: 8   RWCPTPEQLMILEEMYRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNHKARDRQK 67

Query: 95  RRKVSISLDHTHHHHHRQQQQQ 117
            RK      H   H  + Q QQ
Sbjct: 68  LRKKLAKQLHQQQHQLQLQLQQ 89

[Close]

BLAST of Cp4.1LG01g25280 vs. TAIR 10
Match: AT2G01500.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 94.7 bits (234), Expect = 6.3e-20
Identity = 43/63 (68.25%), Postives = 53/63 (84.13%), Query Frame = 0


Query: 35  RWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHQLSFYGKIESKNVFYWFQNHKARERQK 94
           RWNPT EQ+  L EL+RSG RTP+++QIQ+I+ +L  YG+IE KNVFYWFQNHKARER K
Sbjct: 61  RWNPTPEQITTLEELYRSGTRTPTTEQIQQIASKLRKYGRIEGKNVFYWFQNHKARERLK 120

Query: 95  RRK 98
           RR+
Sbjct: 121 RRR 123

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g25280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8H1D2	1.4e-32	79.01	WUSCHEL-related homeobox 5 OS=Arabidopsis thaliana OX=3702 GN=WOX5 PE=2 SV=1	[more]
Q9FFK0	1.2e-28	67.65	WUSCHEL-related homeobox 7 OS=Arabidopsis thaliana OX=3702 GN=WOX7 PE=2 SV=1	[more]
Q8W0F1	2.2e-25	72.50	WUSCHEL-related homeobox 9 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX9 PE=2...	[more]
A2XZR3	1.1e-19	55.45	Putative WUSCHEL-related homeobox 2 OS=Oryza sativa subsp. indica OX=39946 GN=WO...	[more]
Q5W7C3	1.1e-19	55.45	Putative WUSCHEL-related homeobox 2 OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]

BLAST of Cp4.1LG01g25280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023545185.1	9.91e-85	100.00	WUSCHEL-related homeobox 5-like [Cucurbita pepo subsp. pepo]	[more]
KAG6602625.1	2.41e-80	96.85	WUSCHEL-related homeobox 5, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022953411.1	4.69e-80	96.85	WUSCHEL-related homeobox 5-like [Cucurbita moschata]	[more]
KAG7033309.1	5.74e-79	95.28	WUSCHEL-related homeobox 5, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022990545.1	2.14e-78	95.28	WUSCHEL-related homeobox 5-like [Cucurbita maxima]	[more]

BLAST of Cp4.1LG01g25280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GMY2	2.27e-80	96.85	WUSCHEL-related homeobox 5-like OS=Cucurbita moschata OX=3662 GN=LOC111455970 PE...	[more]
A0A6J1JQD8	1.04e-78	95.28	WUSCHEL-related homeobox 5-like OS=Cucurbita maxima OX=3661 GN=LOC111487393 PE=3...	[more]
A0A6J1JWK4	9.11e-57	84.68	WUSCHEL-related homeobox 5-like OS=Cucurbita maxima OX=3661 GN=LOC111489507 PE=3...	[more]
A0A6J1FH52	2.27e-56	78.23	WUSCHEL-related homeobox 5-like OS=Cucurbita moschata OX=3662 GN=LOC111445643 PE...	[more]
A0A0A0KAB0	2.69e-55	74.22	Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G010010 PE...	[more]

BLAST of Cp4.1LG01g25280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G11260.1	1.0e-33	79.01	WUSCHEL related homeobox 5	[more]
AT5G05770.1	8.8e-30	67.65	WUSCHEL related homeobox 7	[more]
AT3G18010.1	2.0e-21	73.02	WUSCHEL related homeobox 1	[more]
AT2G28610.1	6.3e-20	57.32	Homeodomain-like superfamily protein	[more]
AT2G01500.1	6.3e-20	68.25	Homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 31..98 e-value: 2.0E-4 score: 30.5
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 33..93 e-value: 8.2E-19 score: 67.2
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 29..94 score: 11.256157
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 35..95 e-value: 1.54459E-5 score: 38.3785
None	No IPR available	GENE3D	1.10.10.60		coord: 32..100 e-value: 3.4E-10 score: 41.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	PANTHER	PTHR45940:SF3	WUSCHEL-RELATED HOMEOBOX 7	coord: 2..121
IPR044555	Protein WUSCHEL-like	PANTHER	PTHR45940	WUSCHEL-RELATED HOMEOBOX 1-RELATED	coord: 2..121
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 34..97

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g25280.1	Cp4.1LG01g25280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0099402	plant organ development
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity