Cp4.1LG01g24810 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g24810
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Ribosomal protein S14
Location	Cp4.1LG01: 18703108 .. 18703413 (+)
RNA-Seq Expression	Cp4.1LG01g24810
Synteny	Cp4.1LG01g24810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGGAGGACAAGCGGAACATTCTTGACCATTATCGTCGACAGCTAGCTGCGAAGTTTGAGTTGAAGCGGAAGCTTTTCAAAGCCGTTTGCAATGATCCGAGTCTTCCCAACGATGTGCGAGAAGAGCATCGTTATAAGCTGTCGAAATTGCCTAGAAATAGTTCGTTTACTCGACTGAGGAATCGCTGCATCTTCACCGGTCGACCTAGGGGTGTCTATCAGCTTTTCCGTGTTTCTCGTATCGTCTTCCGTGATCTGGCATCCAAAGGTCTTGTTATGGGTGTCAAGAAATCTTCTTGGTAG

mRNA sequence

ATGACGGAGGACAAGCGGAACATTCTTGACCATTATCGTCGACAGCTAGCTGCGAAGTTTGAGTTGAAGCGGAAGCTTTTCAAAGCCGTTTGCAATGATCCGAGTCTTCCCAACGATGTGCGAGAAGAGCATCGTTATAAGCTGTCGAAATTGCCTAGAAATAGTTCGTTTACTCGACTGAGGAATCGCTGCATCTTCACCGGTCGACCTAGGGGTGTCTATCAGCTTTTCCGTGTTTCTCGTATCGTCTTCCGTGATCTGGCATCCAAAGGTCTTGTTATGGGTGTCAAGAAATCTTCTTGGTAG

Coding sequence (CDS)

ATGACGGAGGACAAGCGGAACATTCTTGACCATTATCGTCGACAGCTAGCTGCGAAGTTTGAGTTGAAGCGGAAGCTTTTCAAAGCCGTTTGCAATGATCCGAGTCTTCCCAACGATGTGCGAGAAGAGCATCGTTATAAGCTGTCGAAATTGCCTAGAAATAGTTCGTTTACTCGACTGAGGAATCGCTGCATCTTCACCGGTCGACCTAGGGGTGTCTATCAGCTTTTCCGTGTTTCTCGTATCGTCTTCCGTGATCTGGCATCCAAAGGTCTTGTTATGGGTGTCAAGAAATCTTCTTGGTAG

Protein sequence

MTEDKRNILDHYRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRLRNRCIFTGRPRGVYQLFRVSRIVFRDLASKGLVMGVKKSSW

Homology

[Close]

BLAST of Cp4.1LG01g24810 vs. ExPASy Swiss-Prot
Match: P14875 (Ribosomal protein S14, mitochondrial OS=Oenothera berteroana OX=3950 GN=RPS14 PE=3 SV=2)

HSP 1 Score: 157.1 bits (396), Expect = 1.0e-37
Identity = 72/98 (73.47%), Postives = 87/98 (88.78%), Query Frame = 0


Query: 4   DKRNILDHYRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRLRNR 63
           +KRNI DH RR LA K+EL+RKL+KA CNDP+LP+D+R++HRYKLSKLPRNSSF R+RNR
Sbjct: 2   EKRNIRDHKRRLLATKYELRRKLYKAFCNDPALPSDMRDKHRYKLSKLPRNSSFARVRNR 61

Query: 64  CIFTGRPRGVYQLFRVSRIVFRDLASKGLVMGVKKSSW 102
           CI TGRPR VY+ FR+SRIVFR LAS+G +MG+KKSSW
Sbjct: 62  CISTGRPRSVYEFFRISRIVFRGLASRGPLMGIKKSSW 99

[Close]

BLAST of Cp4.1LG01g24810 vs. ExPASy Swiss-Prot
Match: P05716 (Ribosomal protein S14, mitochondrial OS=Vicia faba OX=3906 GN=RPS14 PE=3 SV=2)

HSP 1 Score: 150.6 bits (379), Expect = 9.5e-36
Identity = 71/98 (72.45%), Postives = 85/98 (86.73%), Query Frame = 0


Query: 4   DKRNILDHYRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRLRNR 63
           +KRNI DH RR LAAK+EL+RKL+KA C D  LP+D+R++ RYKLSKLPRNSSF R+RNR
Sbjct: 3   EKRNIRDHKRRLLAAKYELRRKLYKAFCKDSDLPSDMRDKLRYKLSKLPRNSSFARVRNR 62

Query: 64  CIFTGRPRGVYQLFRVSRIVFRDLASKGLVMGVKKSSW 102
           CI TGRPR VY+LFR+SRIVFR LAS+G +MG+KKSSW
Sbjct: 63  CISTGRPRSVYELFRISRIVFRSLASRGPLMGIKKSSW 100

[Close]

BLAST of Cp4.1LG01g24810 vs. ExPASy Swiss-Prot
Match: P49387 (Ribosomal protein S14, mitochondrial OS=Brassica napus OX=3708 GN=RPS14 PE=3 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 6.2e-35
Identity = 69/98 (70.41%), Postives = 83/98 (84.69%), Query Frame = 0


Query: 4   DKRNILDHYRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRLRNR 63
           +K+N  DH RR LAAKFEL+RKL+KA C DP LP+D+R++HRYKLSKLPRNSSF R+RNR
Sbjct: 3   EKQNSRDHKRRLLAAKFELRRKLYKAFCKDPDLPSDMRDKHRYKLSKLPRNSSFARVRNR 62

Query: 64  CIFTGRPRGVYQLFRVSRIVFRDLASKGLVMGVKKSSW 102
           CI TGRPR V + FR+ RIVFR LAS+G +MG+KKSSW
Sbjct: 63  CISTGRPRSVSEFFRIYRIVFRGLASRGSLMGIKKSSW 100

[Close]

BLAST of Cp4.1LG01g24810 vs. ExPASy Swiss-Prot
Match: P26873 (Ribosomal protein S14, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPS14 PE=3 SV=2)

HSP 1 Score: 135.6 bits (340), Expect = 3.2e-31
Identity = 64/94 (68.09%), Postives = 78/94 (82.98%), Query Frame = 0


Query: 8   ILDHYRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRLRNRCIFT 67
           I DH RR L AK+ELKR  +KA+C D +LPN +R E+ +KLSKLPRNSS TR+RNRCIFT
Sbjct: 6   IRDHKRRLLVAKYELKRMHYKAICQDRNLPNKIRYEYFFKLSKLPRNSSKTRVRNRCIFT 65

Query: 68  GRPRGVYQLFRVSRIVFRDLASKGLVMGVKKSSW 102
           GRPR VY+LFR+SRIVFR+LASKG ++G+ KS W
Sbjct: 66  GRPRSVYKLFRISRIVFRELASKGSLIGINKSCW 99

[Close]

BLAST of Cp4.1LG01g24810 vs. ExPASy Swiss-Prot
Match: P46752 (Ribosomal protein S14, mitochondrial OS=Prototheca wickerhamii OX=3111 GN=RPS14 PE=3 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.6e-19
Identity = 50/92 (54.35%), Postives = 65/92 (70.65%), Query Frame = 0


Query: 10  DHYRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRLRNRCIFTGR 69
           D  RR+L  K+E KR L+KA+ +D +L  D+R     KL+KLPRNSS  R++NRCI TGR
Sbjct: 8   DLKRRKLYKKYESKRLLYKALISDCNLNQDLRFILTQKLNKLPRNSSQVRVKNRCILTGR 67

Query: 70  PRGVYQLFRVSRIVFRDLASKGLVMGVKKSSW 102
              VY+  R+SRI FRDLA++GL+ G  KSSW
Sbjct: 68  GHSVYKFCRISRIKFRDLANQGLIQGCVKSSW 99

[Close]

BLAST of Cp4.1LG01g24810 vs. NCBI nr
Match: KAG7032953.1 (Ribosomal protein S14, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 202 bits (514), Expect = 1.88e-65
Identity = 100/101 (99.01%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MTEDKRNILDHYRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRL 60
           MTEDKRNILDHYRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRL
Sbjct: 1   MTEDKRNILDHYRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRL 60

Query: 61  RNRCIFTGRPRGVYQLFRVSRIVFRDLASKGLVMGVKKSSW 101
           RNRCIFTGRPRGVYQLFRVSRIVFRDLASKGL+MGVKKSSW
Sbjct: 61  RNRCIFTGRPRGVYQLFRVSRIVFRDLASKGLIMGVKKSSW 101

[Close]

BLAST of Cp4.1LG01g24810 vs. NCBI nr
Match: XP_023550870.1 (uncharacterized protein LOC111808878 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 201 bits (512), Expect = 3.79e-65
Identity = 100/101 (99.01%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MTEDKRNILDHYRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRL 60
           MTEDKRNILDHYRRQLAAKFELKRKL+KAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRL
Sbjct: 1   MTEDKRNILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRL 60

Query: 61  RNRCIFTGRPRGVYQLFRVSRIVFRDLASKGLVMGVKKSSW 101
           RNRCIFTGRPRGVYQLFRVSRIVFRDLASKGLVMGVKKSSW
Sbjct: 61  RNRCIFTGRPRGVYQLFRVSRIVFRDLASKGLVMGVKKSSW 101

[Close]

BLAST of Cp4.1LG01g24810 vs. NCBI nr
Match: XP_022938933.1 (uncharacterized protein LOC111444996 [Cucurbita moschata] >XP_022938934.1 uncharacterized protein LOC111444996 [Cucurbita moschata] >KAG7016311.1 Ribosomal protein S14, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 201 bits (511), Expect = 5.39e-65
Identity = 99/101 (98.02%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MTEDKRNILDHYRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRL 60
           MTEDKRNILDHYRRQLAAKFELKRKL+KAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRL
Sbjct: 1   MTEDKRNILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRL 60

Query: 61  RNRCIFTGRPRGVYQLFRVSRIVFRDLASKGLVMGVKKSSW 101
           RNRCIFTGRPRGVYQLFRVSRIVFRDLASKGL+MGVKKSSW
Sbjct: 61  RNRCIFTGRPRGVYQLFRVSRIVFRDLASKGLIMGVKKSSW 101

[Close]

BLAST of Cp4.1LG01g24810 vs. NCBI nr
Match: XP_038884392.1 (ribosomal protein S14, mitochondrial [Benincasa hispida])

HSP 1 Score: 194 bits (494), Expect = 2.12e-62
Identity = 94/101 (93.07%), Postives = 100/101 (99.01%), Query Frame = 0


Query: 1   MTEDKRNILDHYRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRL 60
           M+EDKRNILDHYRRQLAAKFE+KRKL+KA+CNDPSLPNDVRE+HRYKLSKLPRNSSFTRL
Sbjct: 1   MSEDKRNILDHYRRQLAAKFEVKRKLYKAICNDPSLPNDVREDHRYKLSKLPRNSSFTRL 60

Query: 61  RNRCIFTGRPRGVYQLFRVSRIVFRDLASKGLVMGVKKSSW 101
           RNRCIFTGRPR VYQLFRVSRIVFRDLASKGL+MGVKKSSW
Sbjct: 61  RNRCIFTGRPRAVYQLFRVSRIVFRDLASKGLIMGVKKSSW 101

[Close]

BLAST of Cp4.1LG01g24810 vs. NCBI nr
Match: XP_022134507.1 (uncharacterized protein LOC111006733 [Momordica charantia] >XP_022134508.1 uncharacterized protein LOC111006733 [Momordica charantia])

HSP 1 Score: 191 bits (486), Expect = 3.52e-61
Identity = 95/101 (94.06%), Postives = 98/101 (97.03%), Query Frame = 0


Query: 1   MTEDKRNILDHYRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRL 60
           M+ DKRNILDHYRRQLAAKFELKRKL+KAVCNDPSLPNDVREE RYKLSKLPRNSSFTRL
Sbjct: 1   MSGDKRNILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEQRYKLSKLPRNSSFTRL 60

Query: 61  RNRCIFTGRPRGVYQLFRVSRIVFRDLASKGLVMGVKKSSW 101
           RNRCIFTGRPR VYQLFRVSRIVFRDLASKGL+MGVKKSSW
Sbjct: 61  RNRCIFTGRPRAVYQLFRVSRIVFRDLASKGLIMGVKKSSW 101

[Close]

BLAST of Cp4.1LG01g24810 vs. ExPASy TrEMBL
Match: A0A6J1FKA4 (uncharacterized protein LOC111444996 OS=Cucurbita moschata OX=3662 GN=LOC111444996 PE=3 SV=1)

HSP 1 Score: 201 bits (511), Expect = 2.61e-65
Identity = 99/101 (98.02%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MTEDKRNILDHYRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRL 60
           MTEDKRNILDHYRRQLAAKFELKRKL+KAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRL
Sbjct: 1   MTEDKRNILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRL 60

Query: 61  RNRCIFTGRPRGVYQLFRVSRIVFRDLASKGLVMGVKKSSW 101
           RNRCIFTGRPRGVYQLFRVSRIVFRDLASKGL+MGVKKSSW
Sbjct: 61  RNRCIFTGRPRGVYQLFRVSRIVFRDLASKGLIMGVKKSSW 101

[Close]

BLAST of Cp4.1LG01g24810 vs. ExPASy TrEMBL
Match: A0A6J1C264 (uncharacterized protein LOC111006733 OS=Momordica charantia OX=3673 GN=LOC111006733 PE=3 SV=1)

HSP 1 Score: 191 bits (486), Expect = 1.70e-61
Identity = 95/101 (94.06%), Postives = 98/101 (97.03%), Query Frame = 0


Query: 1   MTEDKRNILDHYRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRL 60
           M+ DKRNILDHYRRQLAAKFELKRKL+KAVCNDPSLPNDVREE RYKLSKLPRNSSFTRL
Sbjct: 1   MSGDKRNILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEQRYKLSKLPRNSSFTRL 60

Query: 61  RNRCIFTGRPRGVYQLFRVSRIVFRDLASKGLVMGVKKSSW 101
           RNRCIFTGRPR VYQLFRVSRIVFRDLASKGL+MGVKKSSW
Sbjct: 61  RNRCIFTGRPRAVYQLFRVSRIVFRDLASKGLIMGVKKSSW 101

[Close]

BLAST of Cp4.1LG01g24810 vs. ExPASy TrEMBL
Match: A0A5D3CKB3 (Ribosomal protein S14 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G00590 PE=3 SV=1)

HSP 1 Score: 184 bits (468), Expect = 9.48e-59
Identity = 90/101 (89.11%), Postives = 97/101 (96.04%), Query Frame = 0


Query: 1   MTEDKRNILDHYRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRL 60
           M+ DKRNILD+YRRQLAAKFE+KR LFKA+CNDPSLP DVREEHRYKLSKLPRNSSFTRL
Sbjct: 1   MSGDKRNILDNYRRQLAAKFEVKRNLFKAICNDPSLPKDVREEHRYKLSKLPRNSSFTRL 60

Query: 61  RNRCIFTGRPRGVYQLFRVSRIVFRDLASKGLVMGVKKSSW 101
           RNRCIFTGRPRGVYQLFR+SRIVFR+LA KGLVMGVKK+SW
Sbjct: 61  RNRCIFTGRPRGVYQLFRMSRIVFRELAKKGLVMGVKKASW 101

[Close]

BLAST of Cp4.1LG01g24810 vs. ExPASy TrEMBL
Match: A0A1S4E169 (ribosomal protein S14, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103496488 PE=3 SV=1)

HSP 1 Score: 184 bits (468), Expect = 9.48e-59
Identity = 90/101 (89.11%), Postives = 97/101 (96.04%), Query Frame = 0


Query: 1   MTEDKRNILDHYRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRL 60
           M+ DKRNILD+YRRQLAAKFE+KR LFKA+CNDPSLP DVREEHRYKLSKLPRNSSFTRL
Sbjct: 1   MSGDKRNILDNYRRQLAAKFEVKRNLFKAICNDPSLPKDVREEHRYKLSKLPRNSSFTRL 60

Query: 61  RNRCIFTGRPRGVYQLFRVSRIVFRDLASKGLVMGVKKSSW 101
           RNRCIFTGRPRGVYQLFR+SRIVFR+LA KGLVMGVKK+SW
Sbjct: 61  RNRCIFTGRPRGVYQLFRMSRIVFRELAKKGLVMGVKKASW 101

[Close]

BLAST of Cp4.1LG01g24810 vs. ExPASy TrEMBL
Match: A0A0A0LSR8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G386130 PE=3 SV=1)

HSP 1 Score: 182 bits (461), Expect = 1.11e-57
Identity = 89/101 (88.12%), Postives = 96/101 (95.05%), Query Frame = 0


Query: 1   MTEDKRNILDHYRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRL 60
           M+ DKRNILD+YRRQLAAKFELKR LFKA+CNDPSLP D+REEHR KLSKLPRNSSFTRL
Sbjct: 1   MSGDKRNILDNYRRQLAAKFELKRNLFKAICNDPSLPKDIREEHRNKLSKLPRNSSFTRL 60

Query: 61  RNRCIFTGRPRGVYQLFRVSRIVFRDLASKGLVMGVKKSSW 101
           RNRCIFTGRPRGVYQLFR+SRIVFR+LA KGLVMGVKK+SW
Sbjct: 61  RNRCIFTGRPRGVYQLFRMSRIVFRELAKKGLVMGVKKASW 101

[Close]

BLAST of Cp4.1LG01g24810 vs. TAIR 10
Match: AT2G34520.1 (mitochondrial ribosomal protein S14 )

HSP 1 Score: 145.6 bits (366), Expect = 2.2e-35
Identity = 68/97 (70.10%), Postives = 83/97 (85.57%), Query Frame = 0


Query: 5   KRNILDHYRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRLRNRC 64
           KRN  DH RR LAA+FEL+RKL+KA C DP LP+++R+++RYKLSKLPRNS+F R+RNRC
Sbjct: 68  KRNSADHRRRLLAARFELRRKLYKAFCKDPDLPSEMRDKNRYKLSKLPRNSAFARIRNRC 127

Query: 65  IFTGRPRGVYQLFRVSRIVFRDLASKGLVMGVKKSSW 102
           +FTGR R V +LFRVSRIVFR LASKG +MG+ KSSW
Sbjct: 128 VFTGRSRSVTELFRVSRIVFRGLASKGALMGITKSSW 164

[Close]

BLAST of Cp4.1LG01g24810 vs. TAIR 10
Match: ATCG00330.1 (chloroplast ribosomal protein S14 )

HSP 1 Score: 53.9 bits (128), Expect = 8.6e-08
Identity = 34/90 (37.78%), Postives = 49/90 (54.44%), Query Frame = 0


Query: 13  RRQLAAKFEL-KRKLFKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRLRNRCIFTGRPR 72
           R++L  K+ L +R   K +   PSL    + +   KL   PRNS+ TRL  RC  TGRPR
Sbjct: 13  RQKLEKKYHLIRRSSKKEISKIPSLSE--KWKIHGKLQSPPRNSAPTRLHRRCFSTGRPR 72

Query: 73  GVYQLFRVSRIVFRDLASKGLVMGVKKSSW 102
             Y+ F +S  + R++    L+ G  +SSW
Sbjct: 73  ANYRDFGLSGHILREMVQACLLPGATRSSW 100

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g24810 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P14875	1.0e-37	73.47	Ribosomal protein S14, mitochondrial OS=Oenothera berteroana OX=3950 GN=RPS14 PE...	[more]
P05716	9.5e-36	72.45	Ribosomal protein S14, mitochondrial OS=Vicia faba OX=3906 GN=RPS14 PE=3 SV=2	[more]
P49387	6.2e-35	70.41	Ribosomal protein S14, mitochondrial OS=Brassica napus OX=3708 GN=RPS14 PE=3 SV=...	[more]
P26873	3.2e-31	68.09	Ribosomal protein S14, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPS14 P...	[more]
P46752	1.6e-19	54.35	Ribosomal protein S14, mitochondrial OS=Prototheca wickerhamii OX=3111 GN=RPS14 ...	[more]

BLAST of Cp4.1LG01g24810 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7032953.1	1.88e-65	99.01	Ribosomal protein S14, mitochondrial, partial [Cucurbita argyrosperma subsp. arg...	[more]
XP_023550870.1	3.79e-65	99.01	uncharacterized protein LOC111808878 [Cucurbita pepo subsp. pepo]	[more]
XP_022938933.1	5.39e-65	98.02	uncharacterized protein LOC111444996 [Cucurbita moschata] >XP_022938934.1 unchar...	[more]
XP_038884392.1	2.12e-62	93.07	ribosomal protein S14, mitochondrial [Benincasa hispida]	[more]
XP_022134507.1	3.52e-61	94.06	uncharacterized protein LOC111006733 [Momordica charantia] >XP_022134508.1 uncha...	[more]

BLAST of Cp4.1LG01g24810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FKA4	2.61e-65	98.02	uncharacterized protein LOC111444996 OS=Cucurbita moschata OX=3662 GN=LOC1114449...	[more]
A0A6J1C264	1.70e-61	94.06	uncharacterized protein LOC111006733 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A5D3CKB3	9.48e-59	89.11	Ribosomal protein S14 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold30...	[more]
A0A1S4E169	9.48e-59	89.11	ribosomal protein S14, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103496488 PE=...	[more]
A0A0A0LSR8	1.11e-57	88.12	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G386130 PE=3 SV=1	[more]

BLAST of Cp4.1LG01g24810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34520.1	2.2e-35	70.10	mitochondrial ribosomal protein S14	[more]
ATCG00330.1	8.6e-08	37.78	chloroplast ribosomal protein S14	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.287.1480		coord: 3..91 e-value: 3.0E-32 score: 112.8
None	No IPR available	PANTHER	PTHR19836:SF30	RIBOSOMAL PROTEIN S14	coord: 3..101
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 8..101
IPR001209	Ribosomal protein S14	PFAM	PF00253	Ribosomal_S14	coord: 47..100 e-value: 2.6E-24 score: 84.7
IPR001209	Ribosomal protein S14	PANTHER	PTHR19836	30S RIBOSOMAL PROTEIN S14	coord: 3..101
IPR018271	Ribosomal protein S14, conserved site	PROSITE	PS00527	RIBOSOMAL_S14	coord: 63..85

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g24810.1	Cp4.1LG01g24810.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0015935	small ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome