Cp4.1LG01g24680 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g24680
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Unknown protein
Location	Cp4.1LG01: 18855967 .. 18859410 (+)
RNA-Seq Expression	Cp4.1LG01g24680
Synteny	Cp4.1LG01g24680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGTCATCGGCGCACTGGACAGGATTGTTCCGATAAAGCCCGAAGAAGAAGACAAATTCTGGAGCTCTTATCTGCCTCTATGACCCTTCAAGAAGCCTCGGATAAGCAATAATCGTCTTGCCCTTCCAGGATTTCCTGTAAGTTATCCTATTCACNAATTAAGTTTGAATTTGTCTCTACATGTCGTCATCGGCGCACTCGACAGGATTGTTCCGATAAAGCTCAAAGAAGAAGACAAATTCTGGAGCTCTTATCTGCCTCTACGGCCCTTCAAGAAGCCTCGGATAAAAGCAATAATCGTCTTGCCCTTCCAGGATTTCCTGTAAGTTATCCTATTCACCCATCCTAATTATGTTTCTTTTCTTATATTCATATTGTCGGAAACATTAGATGAAGAATCGAGATGTTTTTTCTTGAAATGTTATGATATTTTAGCTGGGTTTTGGTAATGAGAGACTGTAAATTGTTCTTGGTTGTTTAGATTTGAGATGAATGTTCATCGTGGAAGAGACTGATGTTGGCGTTGGATCTGAAACATTAGTAGCGTTTCATGGTGAGATTGAATCAAATTTGTGTGTCTTTCATGGGCGACGACGCTCGATGAAAATCTCGTTTACAAGCTGTAGATATGGACAGGGGGGATGGAATTGTTCATTCCCCCTCGTATAAATAGTTCCCAGTCTTTTACAGTTCTTTAAATTATGATCTTAAGGAAGTTTTGATAGAAGCACCATTTCAATTCCATTCCAAACCTGTAAGGATCAGAATTAGGTTCTTTGTAATGTTAGTTTCTTAGGAAGTTCCCTTTATCTTTGGTACTTTTAGCTTCAGCTTCGGTGTAGTTCTCCGACCATCTATGTTCCGCTATAGTCATTGATTGTGACACTCCTAATCCACCGCTAGCCGATATTGTCCTCTTTGAGTATTTCCTTAAAGGGCTTCTTCTCAAGGTTTTAAAACGCGTTTACTAGGGAGAGGTTTCCACATTCTTGTAAAAAATGTTTCGTTCCTCTCTCCAACCAATGTGAGATCTCACAATCCACTCCCTTGGGGGCCAATCTCCTAGTTGGTATACTGCCTAGTGTCCGGTGGCTCTGATACCATTTGTAACAGCCCAAACCTATTGCTAGCGATATTGTCCTCTTTGGACATTCTCTTCAAGGGCTTCCCCTCAAGGTTTTAAAATGCGTTTACTAGGGAGAGGTTTCTATATCCTTATAAGGAATGTTCCGTTTCCCTCTCCAACCAATGAGGGATCTCACGTTGATCCTCAACAAGTTTAAAGAACTTAGTCTGTCTGATGTTTCGTTAAATTCCTTGTCTCAAAAATCCAACCAAAGCTAAGTAAACTCGTCTCAAAGTTGAAGTAGTTCCATCTAGTCCGAGTTTTGGACATTGTAATTGGAACTCAAAGCTCCCACAACGATTGTTATGCATTCCCTTCCCAAGATATCTTGAAAATTCTTAATATTTGCCTTACCGTTTACGTAATAATGGCAACTATGATGACCCAAGTCCATCGCTAGTAGATATTGTCCTATTTAGGCTCTCTTTCGAGCTTTCCTTCAAGGTTTTTAAAACACGTCTACTAGGGAGAGGTTTCCACACCCTTATAAAGAATGCTTCATTCCCCTCTAGCGGTGGGCTTGGGCCGTTACAGTTTAGTTGAGTTATGTGGTAAATATTATGTTGGCTAGTCACGTTTGTAACGCATGTATCAACCACTATTAATCCGACTACTCATACTTGTCTGTGCTTAATTCATGAGTAAATCATTATCGCGAGATATTTGTTTCGGTTTATGTTATGCTTTCATTTTGCAACTGCCCACACAGAAGTTAGTGTATTAGAACAGAAAGGATTTGATTTGTTTTCTAATGTGAACATAGTCATTGGTTGTTGAGGACTGCCCAATGCCAAACGTAAGCAAGTCAGGCTAAGTATGGACGGCAAGGAGGAGATAAGAAGGTTTCCATTTTCTATAAATTCTAAGACTTGCACCAAATTTTTATTAGCTTAGTTCAACAATTTGTTGTTTGTTGTTCATTTTCCATTTTTACTCTTTCATTTCAATGGGCAATTACATCTGTTATGTTTCATAAACCCAGTGATGAACTGCCATTCACCTTTGAAAAGATGTATGGATTCTCCACAGTTGATGGCTTTGTGGAGATAGTCGAAAGCTCGGCCGAGATGATCAAGTATATCGCAAATGAACCGTCAACTGGGCTTTTCTACATTCAACAGCATACAAAAAATGCCGTTCCCAACGTTCTCAATATGAAGAATAGTGTGGCGAACACGTCTCGTGAATCGACTTTGCACACTGAAGATTCGGAGGATTCGATCACGATGTTGAGGTCAATGAAAGAATGTGGATTTCCCATTGCTGATGAGATGATTAGAGACATCAAAAAGTCTCTTGCTGTAATGTCAACCAAACAGCCAAGAAGAGGCTTGATCCGTAGTACTTATGGTATGCAGCCACCGGGGAGAGTAAGCACTTGGAGGTCAGCCACTTGGGGGCGAAGTGTAGCCATTGCCCCGGGTGATGACGACGGTGGTGGCTATATTTCAACGGTATTCAAGTCNGTGAATCGACTTTGCACACTGAAGATTCGGAGGATTCGATCACGATGTTGAGGTCAATGAAAGAATGTGGATTTCCCATTGCTGATGAGATGATTAGAGACATCAAAAGGTCTCTTGCTGTAATGTCAACCAAACAACCAAGAAGAGGCTTGATCCGTAGTACTTATGGTATGCAGCCACCAGGGAGAGTAAGCACTTGGAGGTCAGCCACTTGGGGCCGAAGTGTAGCCATTGCCCCGGGCGATGACGACGGTGGTGGCTATATTTCAACGGTATTCAAGTCAGCTAGAGAAACAGCGAGCAACTTTAAGTGGCCACAGCTCGACATCGTGGAAGATCTTGCACGAGTCGAAGTTCATAAGGCTCAGCCAGAACCTAACCAACCATCAGTTCTATCAGCTAGTTCTAGTTCGTCACAGCCAGATATGGATAGCGACGAGCTGCCTCTGTCTTGTCAAGTGAACGATGTGTTGCAATGCGACGATCGGGTTGATGTTGGTTTGGACACTGATGTACTTTCGGTGTCCGATCGTTTTGACGATTTCAGGGCTGATAAAGAAGCAAAATTGAAAGATTGGTTGGAAGGGTCTGGCAGCTTGAATGATATAAGAGATTTGAGCGCAGGGAAAGGGCATTAAGATTGATATTGATGCGTTATTTAACTGTAAAAATGATAACATAAAAACCACTCAAAATACACTTCAATTCCATCATTGAAGAGTTGTATTTCTATAGCTTTGTAATGTGATGGTATTGGATTAAGGATTTGAGTTGAATCGTACATAGAAAGTATAAAGCACGAGTTCGTACGGAAGTAAAATAAAGTGGCTGAATGTATTGAAAAATTTA

mRNA sequence

ATGTCTTTGAATTTGTCTCTACATGTCGTCATCGGCGCACTCGACAGGATTGTTCCGATAAAGCTCAAAGAAGAAGACAAATTCTGGAGCTCTTATCTGCCTCTACGGCCCTTCAAGAAGCCTCGGATAAAAGCAATAATCGTCTTGCCCTTCCAGGATTTCCTTGATGAACTGCCATTCACCTTTGAAAAGATGTATGGATTCTCCACAGTTGATGGCTTTGTGGAGATAGTCGAAAGCTCGGCCGAGATGATCAAGTATATCGCAAATGAACCGTCAACTGGGCTTTTCTACATTCAACAGCATACAAAAAATGCCGTTCCCAACGTTCTCAATATGAAGAATAGTGTGGCGAACACGTCTCGTGAATCGACTTTGCACACTGAAGATTCGGAGGATTCGATCACGATGTTGAGGTCAATGAAAGAATGTGGATTTCCCATTGCTGATGAGATGATTAGAGACATCAAAAAGTCTCTTGCTGTAATGTCAACCAAACAGCCAAGAAGAGGCTTGATCCGTAGTACTTATGGTATGCAGCCACCGGGGAGAGTAAGCACTTGGAGGTCAGCCACTTGGGGGCGAAGTGTAGCCATTGCCCCGGGTGATGACGACGGTGGTGGCTATATTTCAACGGTATTCAAGTCNGTGAATCGACTTTGCACACTGAAGATTCGGAGGATTCGATCACGATGTTGAGGTCAATGAAAGAATGTGGATTTCCCATTGCTGATGAGATGATTAGAGACATCAAAAGGTCTCTTGCTGTAATGTCAACCAAACAACCAAGAAGAGGCTTGATCCGTAGTACTTATGGTATGCAGCCACCAGGGAGAGTAAGCACTTGGAGGTCAGCCACTTGGGGCCGAAGTGTAGCCATTGCCCCGGGCGATGACGACGGTGGTGGCTATATTTCAACGGTATTCAAGTCAGCTAGAGAAACAGCGAGCAACTTTAAGTGGCCACAGCTCGACATCGTGGAAGATCTTGCACGAGTCGAAGTTCATAAGGCTCAGCCAGAACCTAACCAACCATCAGTTCTATCAGCTAGTTCTAGTTCGTCACAGCCAGATATGGATAGCGACGAGCTGCCTCTGTCTTGTCAAGTGAACGATGTGTTGCAATGCGACGATCGGGTTGATGTTGGTTTGGACACTGATGTACTTTCGGTGTCCGATCGTTTTGACGATTTCAGGGCTGATAAAGAAGCAAAATTGAAAGATTGGTTGGAAGGGTCTGGCAGCTTGAATGATATAAGAGATTTGAGCGCAGGGAAAGGGCATTAAGATTGATATTGATGCGTTATTTAACTGTAAAAATGATAACATAAAAACCACTCAAAATACACTTCAATTCCATCATTGAAGAGTTGTATTTCTATAGCTTTGTAATGTGATGGTATTGGATTAAGGATTTGAGTTGAATCGTACATAGAAAGTATAAAGCACGAGTTCGTACGGAAGTAAAATAAAGTGGCTGAATGTATTGAAAAATTTA

Coding sequence (CDS)

ATGTCTTTGAATTTGTCTCTACATGTCGTCATCGGCGCACTCGACAGGATTGTTCCGATAAAGCTCAAAGAAGAAGACAAATTCTGGAGCTCTTATCTGCCTCTACGGCCCTTCAAGAAGCCTCGGATAAAAGCAATAATCGTCTTGCCCTTCCAGGATTTCCTTGATGAACTGCCATTCACCTTTGAAAAGATGTATGGATTCTCCACAGTTGATGGCTTTGTGGAGATAGTCGAAAGCTCGGCCGAGATGATCAAGTATATCGCAAATGAACCGTCAACTGGGCTTTTCTACATTCAACAGCATACAAAAAATGCCGTTCCCAACGTTCTCAATATGAAGAATAGTGTGGCGAACACGTCTCGTGAATCGACTTTGCACACTGAAGATTCGGAGGATTCGATCACGATGTTGAGGTCAATGAAAGAATGTGGATTTCCCATTGCTGATGAGATGATTAGAGACATCAAAAAGTCTCTTGCTGTAATGTCAACCAAACAGCCAAGAAGAGGCTTGATCCGTAGTACTTATGGTATGCAGCCACCGGGGAGAGTAAGCACTTGGAGGTCAGCCACTTGGGGGCGAAGTGTAGCCATTGCCCCGGGTGATGACGACGGTGGTGGCTATATTTCAACGGTATTCAAGTCNGTGAATCGACTTTGCACACTGAAGATTCGGAGGATTCGATCACGATGTTGA

Protein sequence

MSLNLSLHVVIGALDRIVPIKLKEEDKFWSSYLPLRPFKKPRIKAIIVLPFQDFLDELPFTFEKMYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHTKNAVPNVLNMKNSVANTSRESTLHTEDSEDSITMLRSMKECGFPIADEMIRDIKKSLAVMSTKQPRRGLIRSTYGMQPPGRVSTWRSATWGRSVAIAPGDDDGGGYISTVFKSVNRLCTLKIRRIRSRC

Homology

[Close]

BLAST of Cp4.1LG01g24680 vs. NCBI nr
Match: KAG6602294.1 (hypothetical protein SDJN03_07527, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 322 bits (825), Expect = 1.25e-107
Identity = 162/164 (98.78%), Postives = 162/164 (98.78%), Query Frame = 0


Query: 53  DFLDELPFTFEKMYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHTKNAVPNVLN 112
           DFLDELPFTFEKMYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHTKNAVPNVLN
Sbjct: 20  DFLDELPFTFEKMYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHTKNAVPNVLN 79

Query: 113 MKNSVANTSRESTLHTEDSEDSITMLRSMKECGFPIADEMIRDIKKSLAVMSTKQPRRGL 172
           MKNSVANTSRESTLHTEDSEDSITMLRSMKECGFPIADEMIRDIKKSLAVMS KQPRRGL
Sbjct: 80  MKNSVANTSRESTLHTEDSEDSITMLRSMKECGFPIADEMIRDIKKSLAVMSAKQPRRGL 139

Query: 173 IRSTYGMQPPGRVSTWRSATWGRSVAIAPGDDDGGGYISTVFKS 216
           IRSTYGMQPPGRVSTWRSATWGRSVAIAP DDDGGGYISTVFKS
Sbjct: 140 IRSTYGMQPPGRVSTWRSATWGRSVAIAPRDDDGGGYISTVFKS 183

[Close]

BLAST of Cp4.1LG01g24680 vs. NCBI nr
Match: XP_022957415.1 (uncharacterized protein LOC111458823 isoform X1 [Cucurbita moschata] >XP_022957421.1 uncharacterized protein LOC111458823 isoform X1 [Cucurbita moschata])

HSP 1 Score: 316 bits (809), Expect = 2.17e-105
Identity = 158/161 (98.14%), Postives = 159/161 (98.76%), Query Frame = 0


Query: 56  DELPFTFEKMYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHTKNAVPNVLNMKN 115
           DELPFTFEKMYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHTKNAVPN+LNMKN
Sbjct: 10  DELPFTFEKMYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHTKNAVPNILNMKN 69

Query: 116 SVANTSRESTLHTEDSEDSITMLRSMKECGFPIADEMIRDIKKSLAVMSTKQPRRGLIRS 175
           SVANTSRESTLHTEDSEDSITMLRSMKECGFPIADEMIRDIKKSLAVMS KQPRRGLIRS
Sbjct: 70  SVANTSRESTLHTEDSEDSITMLRSMKECGFPIADEMIRDIKKSLAVMSAKQPRRGLIRS 129

Query: 176 TYGMQPPGRVSTWRSATWGRSVAIAPGDDDGGGYISTVFKS 216
           TYGMQPPGRVSTWRSATWGRSVAIAP DDDGGGYISTVFKS
Sbjct: 130 TYGMQPPGRVSTWRSATWGRSVAIAPRDDDGGGYISTVFKS 170

[Close]

BLAST of Cp4.1LG01g24680 vs. NCBI nr
Match: XP_022990433.1 (uncharacterized protein LOC111487293 isoform X1 [Cucurbita maxima] >XP_022990434.1 uncharacterized protein LOC111487293 isoform X1 [Cucurbita maxima])

HSP 1 Score: 309 bits (792), Expect = 5.55e-103
Identity = 155/165 (93.94%), Postives = 156/165 (94.55%), Query Frame = 0


Query: 56  DELPFTFEKMYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHTKNAVPNVLNMKN 115
           DELPFTFEKMYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHTKN VPNVLNMKN
Sbjct: 10  DELPFTFEKMYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHTKNGVPNVLNMKN 69

Query: 116 SVANTSRESTLHTEDSEDSITMLRSMKECGFPIADEMIRDIKKSLAVMSTKQPRRGLIRS 175
           SVANTSRESTLHTEDSEDSITMLRSMKECGFPIADEM RDIKKSLAVMSTKQPRRGLIRS
Sbjct: 70  SVANTSRESTLHTEDSEDSITMLRSMKECGFPIADEMSRDIKKSLAVMSTKQPRRGLIRS 129

Query: 176 TYGMQPPGRVSTWRSATWGRSVAIAPGDDDGGGYISTVFKSVNRL 220
           TYGMQPPGRVSTWRSATWGRS AIAP DDDGG YISTVFK    +
Sbjct: 130 TYGMQPPGRVSTWRSATWGRSAAIAPRDDDGGAYISTVFKPAREM 174

[Close]

BLAST of Cp4.1LG01g24680 vs. NCBI nr
Match: XP_023514944.1 (uncharacterized protein LOC111779103 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 303 bits (776), Expect = 1.22e-100
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 65  MYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHTKNAVPNVLNMKNSVANTSRES 124
           MYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHTKNAVPNVLNMKNSVANTSRES
Sbjct: 1   MYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHTKNAVPNVLNMKNSVANTSRES 60

Query: 125 TLHTEDSEDSITMLRSMKECGFPIADEMIRDIKKSLAVMSTKQPRRGLIRSTYGMQPPGR 184
           TLHTEDSEDSITMLRSMKECGFPIADEMIRDIKKSLAVMSTKQPRRGLIRSTYGMQPPGR
Sbjct: 61  TLHTEDSEDSITMLRSMKECGFPIADEMIRDIKKSLAVMSTKQPRRGLIRSTYGMQPPGR 120

Query: 185 VSTWRSATWGRSVAIAPGDDDGGGYISTVFKS 216
           VSTWRSATWGRSVAIAPGDDDGGGYISTVFKS
Sbjct: 121 VSTWRSATWGRSVAIAPGDDDGGGYISTVFKS 152

[Close]

BLAST of Cp4.1LG01g24680 vs. NCBI nr
Match: KAG7032975.1 (hypothetical protein SDJN02_07026, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 298 bits (764), Expect = 8.15e-99
Identity = 150/152 (98.68%), Postives = 151/152 (99.34%), Query Frame = 0


Query: 65  MYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHTKNAVPNVLNMKNSVANTSRES 124
           MYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHT+NAVPNVLNMKNSVANTSRES
Sbjct: 1   MYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHTENAVPNVLNMKNSVANTSRES 60

Query: 125 TLHTEDSEDSITMLRSMKECGFPIADEMIRDIKKSLAVMSTKQPRRGLIRSTYGMQPPGR 184
           TLHTEDSEDSITMLRSMKECGFPIADEMIRDIKKSLAVMSTKQPRRGLIRSTYGMQPPGR
Sbjct: 61  TLHTEDSEDSITMLRSMKECGFPIADEMIRDIKKSLAVMSTKQPRRGLIRSTYGMQPPGR 120

Query: 185 VSTWRSATWGRSVAIAPGDDDGGGYISTVFKS 216
           VSTWRSATWGRSVAIAP DDDGGGYISTVFKS
Sbjct: 121 VSTWRSATWGRSVAIAPRDDDGGGYISTVFKS 152

[Close]

BLAST of Cp4.1LG01g24680 vs. ExPASy TrEMBL
Match: A0A6J1H0H0 (uncharacterized protein LOC111458823 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111458823 PE=3 SV=1)

HSP 1 Score: 316 bits (809), Expect = 1.05e-105
Identity = 158/161 (98.14%), Postives = 159/161 (98.76%), Query Frame = 0


Query: 56  DELPFTFEKMYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHTKNAVPNVLNMKN 115
           DELPFTFEKMYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHTKNAVPN+LNMKN
Sbjct: 10  DELPFTFEKMYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHTKNAVPNILNMKN 69

Query: 116 SVANTSRESTLHTEDSEDSITMLRSMKECGFPIADEMIRDIKKSLAVMSTKQPRRGLIRS 175
           SVANTSRESTLHTEDSEDSITMLRSMKECGFPIADEMIRDIKKSLAVMS KQPRRGLIRS
Sbjct: 70  SVANTSRESTLHTEDSEDSITMLRSMKECGFPIADEMIRDIKKSLAVMSAKQPRRGLIRS 129

Query: 176 TYGMQPPGRVSTWRSATWGRSVAIAPGDDDGGGYISTVFKS 216
           TYGMQPPGRVSTWRSATWGRSVAIAP DDDGGGYISTVFKS
Sbjct: 130 TYGMQPPGRVSTWRSATWGRSVAIAPRDDDGGGYISTVFKS 170

[Close]

BLAST of Cp4.1LG01g24680 vs. ExPASy TrEMBL
Match: A0A6J1JS14 (uncharacterized protein LOC111487293 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487293 PE=3 SV=1)

HSP 1 Score: 309 bits (792), Expect = 2.69e-103
Identity = 155/165 (93.94%), Postives = 156/165 (94.55%), Query Frame = 0


Query: 56  DELPFTFEKMYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHTKNAVPNVLNMKN 115
           DELPFTFEKMYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHTKN VPNVLNMKN
Sbjct: 10  DELPFTFEKMYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHTKNGVPNVLNMKN 69

Query: 116 SVANTSRESTLHTEDSEDSITMLRSMKECGFPIADEMIRDIKKSLAVMSTKQPRRGLIRS 175
           SVANTSRESTLHTEDSEDSITMLRSMKECGFPIADEM RDIKKSLAVMSTKQPRRGLIRS
Sbjct: 70  SVANTSRESTLHTEDSEDSITMLRSMKECGFPIADEMSRDIKKSLAVMSTKQPRRGLIRS 129

Query: 176 TYGMQPPGRVSTWRSATWGRSVAIAPGDDDGGGYISTVFKSVNRL 220
           TYGMQPPGRVSTWRSATWGRS AIAP DDDGG YISTVFK    +
Sbjct: 130 TYGMQPPGRVSTWRSATWGRSAAIAPRDDDGGAYISTVFKPAREM 174

[Close]

BLAST of Cp4.1LG01g24680 vs. ExPASy TrEMBL
Match: A0A6J1GZ40 (uncharacterized protein LOC111458823 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111458823 PE=3 SV=1)

HSP 1 Score: 298 bits (762), Expect = 7.94e-99
Identity = 149/152 (98.03%), Postives = 150/152 (98.68%), Query Frame = 0


Query: 65  MYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHTKNAVPNVLNMKNSVANTSRES 124
           MYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHTKNAVPN+LNMKNSVANTSRES
Sbjct: 1   MYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHTKNAVPNILNMKNSVANTSRES 60

Query: 125 TLHTEDSEDSITMLRSMKECGFPIADEMIRDIKKSLAVMSTKQPRRGLIRSTYGMQPPGR 184
           TLHTEDSEDSITMLRSMKECGFPIADEMIRDIKKSLAVMS KQPRRGLIRSTYGMQPPGR
Sbjct: 61  TLHTEDSEDSITMLRSMKECGFPIADEMIRDIKKSLAVMSAKQPRRGLIRSTYGMQPPGR 120

Query: 185 VSTWRSATWGRSVAIAPGDDDGGGYISTVFKS 216
           VSTWRSATWGRSVAIAP DDDGGGYISTVFKS
Sbjct: 121 VSTWRSATWGRSVAIAPRDDDGGGYISTVFKS 152

[Close]

BLAST of Cp4.1LG01g24680 vs. ExPASy TrEMBL
Match: A0A6J1JQ35 (uncharacterized protein LOC111487293 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487293 PE=3 SV=1)

HSP 1 Score: 291 bits (745), Expect = 2.03e-96
Identity = 146/156 (93.59%), Postives = 147/156 (94.23%), Query Frame = 0


Query: 65  MYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHTKNAVPNVLNMKNSVANTSRES 124
           MYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHTKN VPNVLNMKNSVANTSRES
Sbjct: 1   MYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHTKNGVPNVLNMKNSVANTSRES 60

Query: 125 TLHTEDSEDSITMLRSMKECGFPIADEMIRDIKKSLAVMSTKQPRRGLIRSTYGMQPPGR 184
           TLHTEDSEDSITMLRSMKECGFPIADEM RDIKKSLAVMSTKQPRRGLIRSTYGMQPPGR
Sbjct: 61  TLHTEDSEDSITMLRSMKECGFPIADEMSRDIKKSLAVMSTKQPRRGLIRSTYGMQPPGR 120

Query: 185 VSTWRSATWGRSVAIAPGDDDGGGYISTVFKSVNRL 220
           VSTWRSATWGRS AIAP DDDGG YISTVFK    +
Sbjct: 121 VSTWRSATWGRSAAIAPRDDDGGAYISTVFKPAREM 156

[Close]

BLAST of Cp4.1LG01g24680 vs. ExPASy TrEMBL
Match: A0A6J1FML8 (uncharacterized protein LOC111445573 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445573 PE=3 SV=1)

HSP 1 Score: 264 bits (674), Expect = 1.49e-85
Identity = 130/152 (85.53%), Postives = 140/152 (92.11%), Query Frame = 0


Query: 65  MYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHTKNAVPNVLNMKNSVANTSRES 124
           M+GFSTVDGFVEI ESSAEMIKYIANEPSTGLFYIQQHTKNAVPNV+N+KNSV + S E+
Sbjct: 1   MHGFSTVDGFVEIAESSAEMIKYIANEPSTGLFYIQQHTKNAVPNVINLKNSVVDKSHET 60

Query: 125 TLHTEDSEDSITMLRSMKECGFPIADEMIRDIKKSLAVMSTKQPRRGLIRSTYGMQPPGR 184
           TLH EDSEDSITML+SMK+CGFPIADEMIRDIKKSLAVMSTKQPRRGLIR+T G Q PGR
Sbjct: 61  TLHAEDSEDSITMLQSMKDCGFPIADEMIRDIKKSLAVMSTKQPRRGLIRNTSGTQQPGR 120

Query: 185 VSTWRSATWGRSVAIAPGDDDGGGYISTVFKS 216
           +STWRSATWGRS  +AP DDD GGYISTVFKS
Sbjct: 121 MSTWRSATWGRSAIVAPRDDDSGGYISTVFKS 152

[Close]

BLAST of Cp4.1LG01g24680 vs. TAIR 10
Match: AT2G39170.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function NEP (InterPro:IPR019320); Has 57 Blast hits to 57 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )

HSP 1 Score: 161.8 bits (408), Expect = 6.7e-40
Identity = 87/150 (58.00%), Postives = 109/150 (72.67%), Query Frame = 0


Query: 65  MYGFSTVDGFVEIVESSAEMIKYIANEPSTGLFYIQQHTKNAVPNVLNMKNSVANTSRES 124
           M+ FSTVDGF EI ES AEMIKYIANEPS GL+YIQQH +NA PNV+N+ N+V   SRE+
Sbjct: 1   MHEFSTVDGFAEINESLAEMIKYIANEPSVGLYYIQQHIRNAAPNVINLNNNVLEKSRET 60

Query: 125 TLHTEDSEDSITMLRSMKECGFPIADEMIRDIKKSLAVMSTKQPRRGLIRSTYGMQPPGR 184
            LHTED EDSI M++SMK+CG PIADEMI DIK SLA+MS+KQPRRG+I ++    P  R
Sbjct: 61  GLHTEDLEDSIAMVKSMKDCGSPIADEMIGDIKNSLAIMSSKQPRRGVILNS--TSPWSR 120

Query: 185 VSTWRSATWGRSVAIAPGDDDGGGYISTVF 215
            S+  + T G     +  + +   Y ++VF
Sbjct: 121 SSSITTRTRGSD--NSQDNSESSNYFTSVF 146

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g24680 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG01g24680 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6602294.1	1.25e-107	98.78	hypothetical protein SDJN03_07527, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022957415.1	2.17e-105	98.14	uncharacterized protein LOC111458823 isoform X1 [Cucurbita moschata] >XP_0229574...	[more]
XP_022990433.1	5.55e-103	93.94	uncharacterized protein LOC111487293 isoform X1 [Cucurbita maxima] >XP_022990434...	[more]
XP_023514944.1	1.22e-100	100.00	uncharacterized protein LOC111779103 [Cucurbita pepo subsp. pepo]	[more]
KAG7032975.1	8.15e-99	98.68	hypothetical protein SDJN02_07026, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Cp4.1LG01g24680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H0H0	1.05e-105	98.14	uncharacterized protein LOC111458823 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JS14	2.69e-103	93.94	uncharacterized protein LOC111487293 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1GZ40	7.94e-99	98.03	uncharacterized protein LOC111458823 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JQ35	2.03e-96	93.59	uncharacterized protein LOC111487293 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1FML8	1.49e-85	85.53	uncharacterized protein LOC111445573 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Cp4.1LG01g24680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39170.1	6.7e-40	58.00	unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function NEP (In...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019320	BLOC-1-related complex subunit 8	PFAM	PF10167	BORCS8	coord: 69..174 e-value: 4.5E-27 score: 94.2
IPR019320	BLOC-1-related complex subunit 8	PANTHER	PTHR21146	MEF2B PROTEIN	coord: 64..217

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g24680.1	Cp4.1LG01g24680.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005765	lysosomal membrane