Cp4.1LG01g24660 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g24660
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Pectate lyase
Location	Cp4.1LG01: 18815530 .. 18819744 (+)
RNA-Seq Expression	Cp4.1LG01g24660
Synteny	Cp4.1LG01g24660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACATTCATAAAAATCTTGAAACAGCTTTATAATAAGATGCAATTAAGAATTCAATAACACTATGTTAGACGAATACAACTCTCTAAAATAGTATGATATTGTCCATTTTGAACATAAGACACCAATGGAGAGAGTATTATTTGTTTATAAATCCATGATGCCTAACTTTCATTCTCCAACCCACGTTTAAGAAACTAATCAATATTTTAAGAAACTAATCAAGATCCAAAAAAAAAAAAAAAAAAATGATGAAGAATAAAAATAAAGAATAACATGAAAGCAGAGGAACATTAAACAGACTGTCTCTCTCACCGGAGCAGAGAACTTTTAATGCACAGACAGAAACAGAACCAGAAGAAAGAAAAGGAAGGAAGAATGGGTTCAACAATTGGAGAAGAAAGCCCACGTTCCCTCCTTGTCTCTCTGGATTATACCCTTTTTTAGAATAATCTTTTCAAAGAAAGAGAATCTAAAGTGTTCTTTCGCCATTTCCCATTGTTCCCAAGTTGTTTTGTTACCAGATTCATGTATAGTTTAGTTATTAAGCAGTGTTCTTGTTCTTGTTCATGTTCATTTCAAGAAGAACGTACCTGAAATAGAGTTCTTCTTGTTCTTGTTCTTGTTCTGGTTCTTCATTTCAACAAAATCTACAAGCAGGCATGTTTGCTGCCATTGCCATTCTGTTGTTCACCTGGTTTTTGAGCTCCTCTCTGCCTTCTCTGGCAGCTTTCAGTTTCAATCTCACTGACCCACATCTTCTTCCAGATCCTGAAACTGTTGTTTATGAAGTTCAGAGGTAAACAAGCAAGTTTCCTCTGATTCAGACTTTGTCCAGAACATGCCTCTAATGGGGTTCTGCAGTTGTTCTTGTTTAGGCATTTTAACAAACACCTTGTGTGCATTGTTGTTCTGCTCAAAGGTGTAGTCCCCTGCTTCAATGGCTTCCTTCCCACTAATTTCGTGATATCTATGTTTCTTGCAGGAGTGTGAATGATTCATTTTCAAGAAGGGAAATGCTGTCGATTCACTCTAAAGGTCAATCGAATTCCTGTCAAACTGGAAACCCTATCGATGATTGTTGGCGCTGCGGTTCGAACTGGCAAGCCAATCGCCAACGGCTTGCAGATTGCAGCATTGGATTTGGCCGAAACGCCATGGGAGGTAAAGGAGGTCAGATCTACATAGTTACAGATTCCTCCGATTCCGACCCTGTAAACCCTCGCCCTGGAACTCTCCGCTACGCTGTGGTTCAAGATGAACCTCTCTGGATCGTCTTTGCTGCAGACATGACTATCAAACTCAAGTACGAACTCATGATGAACAGTTACAAAACCCTAGATGGCCGCGGCGCGAATGTCCACATAACCGGCGGCGGTTGCATCACACTTCAGTACATCTCGAATGTAATCATTCACAACATCAACATTCACCACTGTATCCCTACCGGTCACACTAACGTCCGATCAAGCCCTACGCACGTCGGATACAGAGGAAAGTCCGACGGCGATGGAATCTCAATCTTCAGCTCGCGCAACATCTGGATCGATCATTGCTCCTTATCGTACTGTACCGACGGCTTAATCGACGCCATAATGGGATCGACCGGAATCACGATCTCGAACAACTACTTCTCGCACCACGACGAGGTGATGCTGCTAGGGCACGAGGACGGCTATACGCCAGACTCGGGGATGCAGGTGACGATTGCGTTTAATTTGTTCGGCGAGAAGCTGGTTCAGCGGATGCCGCGGTGCCGGCGGGGTTATATACACGTGGTCAACAACGAGTTCCGGTCGTGGGAGATGTACGCCATCGGCGGTAGCGGTGGTCCGACGATCAACAGCCAAGGGAATCGGTATATTGCACCGGGGAATCCCAATGCGAAGGAGGTATGTTAACGTTAATACTCATTCTTCTCTCCACTCGTTGTACAGTCCACGGCGCGTATTCTGAACGCGCCGCTGAGGGAAATTATTTATAGGGAATTTTTCAGGGCTTAAGGTAAATATATCACTGATTCCATTAAAATTTTAATTTTAGCAAATTCTGATAAAGTAGGGGCAAAACTGAAAATTTTAAAATATACAAGGACCAAATGTAAAATATGTAAAGTCAATGATTTGACGGGACAGTCCTCAGCCACTGGCTTCTGTTTTGGACAAGAGTTGTGTAATAGTAAAAGAAGTGAAACGGTGTCGTTCTGATGCAGGTGACGAAGCGCGTGGACACAAACGCGGGGGATTGGTCGGAATGGAACTGGAGAACGGAGGGGGACATAATGGTAAATGGTGCATTTTTTGTGCCGTCCGGCGAAGGACTGAGCAATATGTACGTTAAAGCTTCGAGTGTGGCGCCCAAATCCGCCGCTCTTGTCGACCAGCTCACTCTCAACGCCGGCGTCTTTGGCGGGACCAGGTACTTTTTCTTTCTAAATGACCAGATTGCCCTTCATTTTTTCTTTTTTTTCTTTTTGGTTAAAATTCATACTCTCTATAGTTGAAAATTTCAATTGGGTCTTGATAGTTGAGGCCTAGTTTTTCATTCGGTTTGTCGGAGTTTAGAGTTTCAATATGAAATGACCAAAATACCCTTGTTTTTTTTCCCTCGAGATTTGGTGTAGTTAATGGGGAGACAATTTGTGCTCCGAAAGTAGCTCTAATCTATCTCGAGGATAAACAGGTTCGAGATTTTAGAGATCAGGAGTAAATGTTAAAAATGTGGTCCTTAATAGTTTCAAAATTTAGAATTTTATGATTGGATATAACCTCATAAATAACTTATCTAGACTTTTATAAAAAAAAAACAAATAATTTTAACTAAAATACAAATTTATGGATAAATTGAATGGGTAAATGAGATATATAGTATGTGGGACTTTGGAGTGAGAATCTAGGGCTGACACAACAGTCGAAAAACACAGCTCACTTGTTTTCTTGTTCTTGTCTTTTGTCTGTTCTGTCCACTTCTACATTGGGCAAGCAAGCAATACCTTTTGCTTTCCCAATCCATTACACACCACAATCTCCTTCAAGTAGGATTGAGAGAGATCAGTATAAACAAGTGTTTAGTAAATTTAGCGATCTCGATATATGATCGTTTATTAATTAATCGAGATACTTACAATGTTCAACTCTGTTCGGTAATATGAGCTCGATTAGAAGCGTAAAGTTGTCCCCTGTGGATTAGAAAAGAAAAAAAAAAAGTTAGCCTTTTAAGTTGTAAGCATAAATAAAGGGTAAAAGGGAAGAGGGTTATAGTGCATGTGTGGGGAAAAGAAGCATTAGCAGTTGGGGCAAGTGAGGGTTTTTCCATTCATACCATAACCTTCTCTTTAGAAAAGAGAGAGCAGCATTCTCCTTGCACTCCGTATGTAACCTACCTATCCTAATAGTCTTTACTACTCGAAAGCTTAAAGCCAGATGAAACCGAACTTCGCTCGCTCTTCAACTACTCTACTCCTTTCTTTCCCGAGCTAAGGCAAGAACACTTTTCGGCCAAGTCTCAAATTTGGGGTTTGCCCATTTCTCTTTTAAGAGTTGGCCAATTAGGCTTTATTCTATCTAGAACTCAAACTTAACCAAATCATAGAGCTAGGAATTGAGTGATTATTTGATGTTCATCTTGATGGATACTCGAGCATTGTTCCATTTTCAATGATGTAGGGAGAGTAGACAGAGCAGCTCGTACCCTGGAGACGAGAGCTTTTCCAATTCCGGGTCCAGTGGCAGCGACAGCGGTGGTGACTACTTCGGGATGATATTCGGCGGGGGCGGTGTGAACAGTGCACTGCCACCATCTCTTTCAGTTGTTAACATGGTCGTTCTAACTCTGCTTACTATTTTAGTTCTGTACACAAACTCAATCTATGATGCTTTATTATCATTGACAGCATTGTAGTACTTGGAAAAGTTCAGAAAATGTTATATAAACTACAAAAGGAAAAGAAAAAAAAGATGCCTCTTTCTATATCCTATATGTATGTGTTTACTATAATTAAAATAAGGCATGGTATGGCAAAGAAGCAAAAAGGAGGTGAATTTCAAACGTACCAGTAAAACATCAACGTTGTCGAAACATGGGTTGTCTGTCTGTCGGTGGAAATATTTGACAAAATGGAATCTTTGGAACCGCCGCAGCATGTGGAAATGTGGATGATGTCTCCCTCCCATAACGAGTGAAAGATCCGCTGCCATTCTACTCCACCGTTGTTCTGT

mRNA sequence

CACATTCATAAAAATCTTGAAACAGCTTTATAATAAGATGCAATTAAGAATTCAATAACACTATGTTAGACGAATACAACTCTCTAAAATAGTATGATATTGTCCATTTTGAACATAAGACACCAATGGAGAGAGTATTATTTGTTTATAAATCCATGATGCCTAACTTTCATTCTCCAACCCACGTTTAAGAAACTAATCAATATTTTAAGAAACTAATCAAGATCCAAAAAAAAAAAAAAAAAAATGATGAAGAATAAAAATAAAGAATAACATGAAAGCAGAGGAACATTAAACAGACTGTCTCTCTCACCGGAGCAGAGAACTTTTAATGCACAGACAGAAACAGAACCAGAAGAAAGAAAAGGAAGGAAGAATGGGTTCAACAATTGGAGAAGAAAGCCCACGTTCCCTCCTTGTCTCTCTGGATTATACCCTTTTTTAGAATAATCTTTTCAAAGAAAGAGAATCTAAAGTGTTCTTTCGCCATTTCCCATTGTTCCCAAGTTGTTTTGTTACCAGATTCATGTATAGTTTAGTTATTAAGCAGTGTTCTTGTTCTTGTTCATGTTCATTTCAAGAAGAACGTACCTGAAATAGAGTTCTTCTTGTTCTTGTTCTTGTTCTGGTTCTTCATTTCAACAAAATCTACAAGCAGGCATGTTTGCTGCCATTGCCATTCTGTTGTTCACCTGGTTTTTGAGCTCCTCTCTGCCTTCTCTGGCAGCTTTCAGTTTCAATCTCACTGACCCACATCTTCTTCCAGATCCTGAAACTGTTGTTTATGAAGTTCAGAGGAGTGTGAATGATTCATTTTCAAGAAGGGAAATGCTGTCGATTCACTCTAAAGGTCAATCGAATTCCTGTCAAACTGGAAACCCTATCGATGATTGTTGGCGCTGCGGTTCGAACTGGCAAGCCAATCGCCAACGGCTTGCAGATTGCAGCATTGGATTTGGCCGAAACGCCATGGGAGGTAAAGGAGGTCAGATCTACATAGTTACAGATTCCTCCGATTCCGACCCTGTAAACCCTCGCCCTGGAACTCTCCGCTACGCTGTGGTTCAAGATGAACCTCTCTGGATCGTCTTTGCTGCAGACATGACTATCAAACTCAAGTACGAACTCATGATGAACAGTTACAAAACCCTAGATGGCCGCGGCGCGAATGTCCACATAACCGGCGGCGGTTGCATCACACTTCAGTACATCTCGAATGTAATCATTCACAACATCAACATTCACCACTGTATCCCTACCGGTCACACTAACGTCCGATCAAGCCCTACGCACGTCGGATACAGAGGAAAGTCCGACGGCGATGGAATCTCAATCTTCAGCTCGCGCAACATCTGGATCGATCATTGCTCCTTATCGTACTGTACCGACGGCTTAATCGACGCCATAATGGGATCGACCGGAATCACGATCTCGAACAACTACTTCTCGCACCACGACGAGGTGATGCTGCTAGGGCACGAGGACGGCTATACGCCAGACTCGGGGATGCAGGTGACGATTGCGTTTAATTTGTTCGGCGAGAAGCTGGTTCAGCGGATGCCGCGGTGCCGGCGGGGTTATATACACGTGGTCAACAACGAGTTCCGGTCGTGGGAGATGTACGCCATCGGCGGTAGCGGTGGTCCGACGATCAACAGCCAAGGGAATCGGTATATTGCACCGGGGAATCCCAATGCGAAGGAGGTGACGAAGCGCGTGGACACAAACGCGGGGGATTGGTCGGAATGGAACTGGAGAACGGAGGGGGACATAATGGTAAATGGTGCATTTTTTGTGCCGTCCGGCGAAGGACTGAGCAATATGTACGTTAAAGCTTCGAGTGTGGCGCCCAAATCCGCCGCTCTTGTCGACCAGCTCACTCTCAACGCCGGCGTCTTTGGCGGGACCAGGGAGAGTAGACAGAGCAGCTCGTACCCTGGAGACGAGAGCTTTTCCAATTCCGGGTCCAGTGGCAGCGACAGCGGTGGTGACTACTTCGGGATGATATTCGGCGGGGGCGGTGTGAACAGTGCACTGCCACCATCTCTTTCAGTTGTTAACATGGTCGTTCTAACTCTGCTTACTATTTTAGTTCTGTACACAAACTCAATCTATGATGCTTTATTATCATTGACAGCATTGTAGTACTTGGAAAAGTTCAGAAAATGTTATATAAACTACAAAAGGAAAAGAAAAAAAAGATGCCTCTTTCTATATCCTATATGTATGTGTTTACTATAATTAAAATAAGGCATGGTATGGCAAAGAAGCAAAAAGGAGGTGAATTTCAAACGTACCAGTAAAACATCAACGTTGTCGAAACATGGGTTGTCTGTCTGTCGGTGGAAATATTTGACAAAATGGAATCTTTGGAACCGCCGCAGCATGTGGAAATGTGGATGATGTCTCCCTCCCATAACGAGTGAAAGATCCGCTGCCATTCTACTCCACCGTTGTTCTGT

Coding sequence (CDS)

ATGTTTGCTGCCATTGCCATTCTGTTGTTCACCTGGTTTTTGAGCTCCTCTCTGCCTTCTCTGGCAGCTTTCAGTTTCAATCTCACTGACCCACATCTTCTTCCAGATCCTGAAACTGTTGTTTATGAAGTTCAGAGGAGTGTGAATGATTCATTTTCAAGAAGGGAAATGCTGTCGATTCACTCTAAAGGTCAATCGAATTCCTGTCAAACTGGAAACCCTATCGATGATTGTTGGCGCTGCGGTTCGAACTGGCAAGCCAATCGCCAACGGCTTGCAGATTGCAGCATTGGATTTGGCCGAAACGCCATGGGAGGTAAAGGAGGTCAGATCTACATAGTTACAGATTCCTCCGATTCCGACCCTGTAAACCCTCGCCCTGGAACTCTCCGCTACGCTGTGGTTCAAGATGAACCTCTCTGGATCGTCTTTGCTGCAGACATGACTATCAAACTCAAGTACGAACTCATGATGAACAGTTACAAAACCCTAGATGGCCGCGGCGCGAATGTCCACATAACCGGCGGCGGTTGCATCACACTTCAGTACATCTCGAATGTAATCATTCACAACATCAACATTCACCACTGTATCCCTACCGGTCACACTAACGTCCGATCAAGCCCTACGCACGTCGGATACAGAGGAAAGTCCGACGGCGATGGAATCTCAATCTTCAGCTCGCGCAACATCTGGATCGATCATTGCTCCTTATCGTACTGTACCGACGGCTTAATCGACGCCATAATGGGATCGACCGGAATCACGATCTCGAACAACTACTTCTCGCACCACGACGAGGTGATGCTGCTAGGGCACGAGGACGGCTATACGCCAGACTCGGGGATGCAGGTGACGATTGCGTTTAATTTGTTCGGCGAGAAGCTGGTTCAGCGGATGCCGCGGTGCCGGCGGGGTTATATACACGTGGTCAACAACGAGTTCCGGTCGTGGGAGATGTACGCCATCGGCGGTAGCGGTGGTCCGACGATCAACAGCCAAGGGAATCGGTATATTGCACCGGGGAATCCCAATGCGAAGGAGGTGACGAAGCGCGTGGACACAAACGCGGGGGATTGGTCGGAATGGAACTGGAGAACGGAGGGGGACATAATGGTAAATGGTGCATTTTTTGTGCCGTCCGGCGAAGGACTGAGCAATATGTACGTTAAAGCTTCGAGTGTGGCGCCCAAATCCGCCGCTCTTGTCGACCAGCTCACTCTCAACGCCGGCGTCTTTGGCGGGACCAGGGAGAGTAGACAGAGCAGCTCGTACCCTGGAGACGAGAGCTTTTCCAATTCCGGGTCCAGTGGCAGCGACAGCGGTGGTGACTACTTCGGGATGATATTCGGCGGGGGCGGTGTGAACAGTGCACTGCCACCATCTCTTTCAGTTGTTAACATGGTCGTTCTAACTCTGCTTACTATTTTAGTTCTGTACACAAACTCAATCTATGATGCTTTATTATCATTGACAGCATTGTAG

Protein sequence

MFAAIAILLFTWFLSSSLPSLAAFSFNLTDPHLLPDPETVVYEVQRSVNDSFSRREMLSIHSKGQSNSCQTGNPIDDCWRCGSNWQANRQRLADCSIGFGRNAMGGKGGQIYIVTDSSDSDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCITLQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQRMPRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDWSEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRESRQSSSYPGDESFSNSGSSGSDSGGDYFGMIFGGGGVNSALPPSLSVVNMVVLTLLTILVLYTNSIYDALLSLTAL

Homology

[Close]

BLAST of Cp4.1LG01g24660 vs. ExPASy Swiss-Prot
Match: Q9SCP2 (Probable pectate lyase 12 OS=Arabidopsis thaliana OX=3702 GN=At3g53190 PE=2 SV=2)

HSP 1 Score: 600.1 bits (1546), Expect = 2.2e-170
Identity = 307/480 (63.96%), Postives = 360/480 (75.00%), Query Frame = 0


Query: 7   ILLFTWFLSSSLPSLAAFSFN---LTDPHLLPDPETVVYEVQRSVNDSFSRREMLSIHSK 66
           +L F+ FL   +P +     N   L  PH  PDPE V Y+VQ  VN S +RR+ L    +
Sbjct: 9   VLFFSLFL--LVPQMVFSMLNRTLLLIPH--PDPELVAYQVQWKVNASITRRQALDTTDQ 68

Query: 67  GQSNSCQTGNPIDDCWRCGSNWQANRQRLADCSIGFGRNAMGGKGGQIYIVTDSSDSDPV 126
             S  C TGNPIDDCW+C  NW  NRQ LADC IGFG+ A+GGKGGQ Y VTDSSD D V
Sbjct: 69  AGSTPCITGNPIDDCWKCDPNWPNNRQGLADCGIGFGQYALGGKGGQFYFVTDSSDDDAV 128

Query: 127 NPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCITLQY 186
           NP+PGTLRY V+Q+EPLWIVF ++M IKLK EL+ NSYKTLDGRGANVHI GGGCITLQY
Sbjct: 129 NPKPGTLRYGVIQEEPLWIVFPSNMMIKLKQELIFNSYKTLDGRGANVHIVGGGCITLQY 188

Query: 187 ISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSYCTD 246
           +SN+IIHNI+IHHC  +G+TNVRSSPTH G+R KSDGDGISIF S++IWIDHCSLS C D
Sbjct: 189 VSNIIIHNIHIHHCYQSGNTNVRSSPTHYGFRTKSDGDGISIFGSKDIWIDHCSLSRCKD 248

Query: 247 GLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQRMPRC 306
           GLIDA+MGSTGITISNN+FSHH+EVMLLGH D Y PDSGMQVTIAFN FGEKL+QRMPRC
Sbjct: 249 GLIDAVMGSTGITISNNFFSHHNEVMLLGHSDHYEPDSGMQVTIAFNHFGEKLIQRMPRC 308

Query: 307 RRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDWSEW 366
           RRGYIHVVNN+F  WEMYAIGGSG PTINSQGNRY AP NP AKEVTKRV+T  GDW  W
Sbjct: 309 RRGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPTNPFAKEVTKRVETPDGDWKGW 368

Query: 367 NWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRESRQSS 426
           NWR+EGDI+VNGAFFV SGEG    Y KA SV PKSA+ + Q+T ++GV G    +    
Sbjct: 369 NWRSEGDILVNGAFFVASGEGAEMRYEKAYSVEPKSASFITQITFHSGVLGVGGRNNNLG 428

Query: 427 SYPGDESFSNSGSSGSDSGGDYFGMIFGGGGVNSALPPSLSVVNMVVLTLLTILVLYTNS 484
            +    +  + G+SG DS  DY   + G G  N     S SV+ + +L+ ++ LV++T+S
Sbjct: 429 MW---TTTGSEGTSGLDSYNDYTDEMSGAGSTNRL---SFSVL-VFLLSSISYLVVFTSS 477

[Close]

BLAST of Cp4.1LG01g24660 vs. ExPASy Swiss-Prot
Match: Q93Z04 (Probable pectate lyase 13 OS=Arabidopsis thaliana OX=3702 GN=PMR6 PE=1 SV=1)

HSP 1 Score: 572.4 bits (1474), Expect = 5.0e-162
Identity = 295/479 (61.59%), Postives = 358/479 (74.74%), Query Frame = 0


Query: 7   ILLFTWFLSSSLPSLAAFSFNLTDPHLLPDPETVVYEVQRSVNDSFSRREM------LSI 66
           + LF   LS++ P       NLT PH  P P++V   V RSVN+S +RR++       S 
Sbjct: 13  LCLFFTLLSATKP------LNLTLPHQHPSPDSVALHVIRSVNESLARRQLSSPSSSSSS 72

Query: 67  HSKGQSNSCQTGNPIDDCWRCG-SNWQANRQRLADCSIGFGRNAMGGKGGQIYIVTDSSD 126
            S   S+SC+TGNPIDDCWRC  ++W  NRQRLADCSIGFG   +GGK G+IY+VTDSSD
Sbjct: 73  SSSSSSSSCRTGNPIDDCWRCSDADWSTNRQRLADCSIGFGHGTLGGKNGKIYVVTDSSD 132

Query: 127 SDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCI 186
           ++P NP PGTLRY V+Q+EPLWIVF+++M I+LK EL++NSYKTLDGRG+ VHITG GC+
Sbjct: 133 NNPTNPTPGTLRYGVIQEEPLWIVFSSNMLIRLKQELIINSYKTLDGRGSAVHITGNGCL 192

Query: 187 TLQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLS 246
           TLQY+ ++IIHN++I+ C P+              RG+SDGDGISIF S+ IW+DHCS+S
Sbjct: 193 TLQYVQHIIIHNLHIYDCKPSAGFE---------KRGRSDGDGISIFGSQKIWVDHCSMS 252

Query: 247 YCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQR 306
           +CTDGLIDA+MGST ITISNNYF+HHDEVMLLGH+D Y PD+GMQVTIAFN FG+ LVQR
Sbjct: 253 HCTDGLIDAVMGSTAITISNNYFTHHDEVMLLGHDDNYAPDTGMQVTIAFNHFGQGLVQR 312

Query: 307 MPRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDT-NAG 366
           MPRCRRGYIHVVNN+F  W+MYAIGGSG PTINSQGNRY AP +P+AKEVTKRVD+ + G
Sbjct: 313 MPRCRRGYIHVVNNDFTEWKMYAIGGSGNPTINSQGNRYSAPSDPSAKEVTKRVDSKDDG 372

Query: 367 DWSEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRE 426
           +WS WNWRTEGD+M NGAFFV SGEG+S+MY KASSV PK+A+LVDQLT NAGVFGG R+
Sbjct: 373 EWSNWNWRTEGDLMENGAFFVASGEGMSSMYSKASSVDPKAASLVDQLTRNAGVFGGPRD 432

Query: 427 SRQSSS-----YPGDESFSNSGSSGSDSGGDYFGMIFGGG---GVNSALPPSLSVVNMV 470
            +  S      Y GD      GSSG  SGG   GM   GG   G +S+     +V  M+
Sbjct: 433 DQGQSGNSYSPYGGDG--GGGGSSGGSSGG---GMDVMGGTTRGSSSSSGDDSNVFQMI 471

[Close]

BLAST of Cp4.1LG01g24660 vs. ExPASy Swiss-Prot
Match: Q9SVQ6 (Putative pectate lyase 14 OS=Arabidopsis thaliana OX=3702 GN=At4g13210 PE=3 SV=2)

HSP 1 Score: 519.2 bits (1336), Expect = 5.0e-146
Identity = 245/389 (62.98%), Postives = 295/389 (75.84%), Query Frame = 0


Query: 27  NLTD----PHLLPDPETVVYEVQRSVNDSFSRREMLSIHSKGQSNSCQTGNPIDDCWRCG 86
           NL+D     H + DPE +   V  S+ +S  RR++      G  +SC TGNPIDDCWRC 
Sbjct: 46  NLSDGEWHEHAVKDPEEIAAMVDMSIRNSTYRRKL------GFFSSCSTGNPIDDCWRCD 105

Query: 87  SNWQANRQRLADCSIGFGRNAMGGKGGQIYIVTDSSDSDPVNPRPGTLRYAVVQDEPLWI 146
             W   R+RLADC+IGFGRNA+GG+ G+ YIVTD SD DPV P+PGTLRYAV+QDEPLWI
Sbjct: 106 KKWHRRRKRLADCAIGFGRNAVGGRDGRYYIVTDPSDHDPVTPKPGTLRYAVIQDEPLWI 165

Query: 147 VFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCITLQYISNVIIHNINIHHCIPTGH 206
           VF  DM I L  EL+MNS+KT+DGRG NVHI GG C+T+QY++N+IIH INIH C  TG+
Sbjct: 166 VFKRDMVITLSQELIMNSFKTIDGRGVNVHIAGGACLTVQYVTNIIIHGINIHDCKRTGN 225

Query: 207 TNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSYCTDGLIDAIMGSTGITISNNYF 266
             VRSS +H G+R  +DGDGISIF S +IWIDH SLS C DGLIDAIMGST ITISNNY 
Sbjct: 226 AMVRSSESHYGWRTMADGDGISIFGSSHIWIDHNSLSSCADGLIDAIMGSTAITISNNYL 285

Query: 267 SHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQRMPRCRRGYIHVVNNEFRSWEMYA 326
           +HH+E +LLGH D YT D  MQVTIA+N FGE L+QRMPRCR GY HVVNN++  WEMYA
Sbjct: 286 THHNEAILLGHTDSYTRDKMMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYA 345

Query: 327 IGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDWSEWNWRTEGDIMVNGAFFVPSG 386
           IGGS  PTINSQGNR++APGN  AKEVTKRV    G+W+ WNWR++GD+M+NGA+F  SG
Sbjct: 346 IGGSANPTINSQGNRFLAPGNRFAKEVTKRVGAGKGEWNNWNWRSQGDLMLNGAYFTSSG 405

Query: 387 EGLSNMYVKASSVAPKSAALVDQLTLNAG 412
            G S  Y +ASS+A KS++LV  LT ++G
Sbjct: 406 AGASANYARASSLAAKSSSLVGMLTSSSG 428

[Close]

BLAST of Cp4.1LG01g24660 vs. ExPASy Swiss-Prot
Match: Q944R1 (Probable pectate lyase 15 OS=Arabidopsis thaliana OX=3702 GN=At4g13710 PE=2 SV=1)

HSP 1 Score: 514.2 bits (1323), Expect = 1.6e-144
Identity = 241/379 (63.59%), Postives = 294/379 (77.57%), Query Frame = 0


Query: 36  DPETVVYEVQRSVNDSFSRREMLSIHSKGQSNSCQTGNPIDDCWRCGSNWQANRQRLADC 95
           DP+ V  EV + V  S   R   +   K    SC TGNPIDDCWRC  NW  NR+RLADC
Sbjct: 88  DPDMVADEVAKLVQMSEQNR---TARRKLGFFSCGTGNPIDDCWRCDRNWHKNRKRLADC 147

Query: 96  SIGFGRNAMGGKGGQIYIVTDSSDSDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYE 155
            IGFGRNA+GG+ G+ YIVTD +D D VNP+PGTLR+AV+Q+EPLWIVF  DM I+LK E
Sbjct: 148 GIGFGRNAIGGRDGRFYIVTDPTDEDVVNPKPGTLRHAVIQEEPLWIVFKRDMVIELKQE 207

Query: 156 LMMNSYKTLDGRGANVHITGGGCITLQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYR 215
           L+MNS+KT+D RG+NVHI  G CIT+Q+I+NVIIH ++IH C PTG+  VRSSP+H G+R
Sbjct: 208 LIMNSFKTIDARGSNVHIANGACITIQFITNVIIHGLHIHDCKPTGNAMVRSSPSHFGWR 267

Query: 216 GKSDGDGISIFSSRNIWIDHCSLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHED 275
             +DGD +SIF S +IWIDH SLS+C DGL+DA+MGST IT+SNN+F+HH+EVMLLGH D
Sbjct: 268 TMADGDAVSIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITVSNNHFTHHNEVMLLGHSD 327

Query: 276 GYTPDSGMQVTIAFNLFGEKLVQRMPRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINSQG 335
            YT D  MQVTIA+N FGE LVQRMPRCR GY HVVNN++  WEMYAIGGS  PTINSQG
Sbjct: 328 SYTKDKLMQVTIAYNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQG 387

Query: 336 NRYIAPGNPNAKEVTKRVDTNAGDWSEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSV 395
           NRY AP +  AKEVTKRV+T+A +W +WNWR+EGD+++NGAFF PSG G S  Y +ASS+
Sbjct: 388 NRYAAPMDRFAKEVTKRVETDASEWKKWNWRSEGDLLLNGAFFRPSGAGASASYGRASSL 447

Query: 396 APKSAALVDQLTLNAGVFG 415
           A K +++VD +T  AG  G
Sbjct: 448 AAKPSSMVDTITSTAGALG 463

[Close]

BLAST of Cp4.1LG01g24660 vs. ExPASy Swiss-Prot
Match: Q9C5M8 (Probable pectate lyase 18 OS=Arabidopsis thaliana OX=3702 GN=At4g24780 PE=2 SV=2)

HSP 1 Score: 514.2 bits (1323), Expect = 1.6e-144
Identity = 238/387 (61.50%), Postives = 296/387 (76.49%), Query Frame = 0


Query: 34  LPDPETVVYEVQRSVNDSFSRREMLSIHSKGQSNSCQTGNPIDDCWRCGSNWQANRQRLA 93
           +PDPE+VV EV +S+N S + R  L         SC TGNPIDDCWRC  +W+ +RQRLA
Sbjct: 27  VPDPESVVEEVHKSINASVAGRRKLGY------LSCTTGNPIDDCWRCDPHWEQHRQRLA 86

Query: 94  DCSIGFGRNAMGGKGGQIYIVTDSSDSDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLK 153
           DC+IGFG+NA+GG+ G+IY+VTDS + +PV+P+PGTLR+AVVQDEPLWI+F  DMTI+LK
Sbjct: 87  DCAIGFGKNAIGGRDGRIYVVTDSGNDNPVSPKPGTLRHAVVQDEPLWIIFQRDMTIQLK 146

Query: 154 YELMMNSYKTLDGRGANVHITGGGCITLQYISNVIIHNINIHHCIPTGHTNVRSSPTHVG 213
            EL+MNS+KT+DGRGA+VHI+GG CIT+QY++N+IIH I+IH C   G+  VRSSP H G
Sbjct: 147 EELIMNSFKTIDGRGASVHISGGPCITIQYVTNIIIHGIHIHDCKQGGNAMVRSSPRHFG 206

Query: 214 YRGKSDGDGISIFSSRNIWIDHCSLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGH 273
           +R  SDGDG+SIF   ++W+DHCS S C DGLIDAIMGST IT+SNN+ +HHD+VMLLGH
Sbjct: 207 WRTISDGDGVSIFGGSHVWVDHCSFSNCEDGLIDAIMGSTAITLSNNHMTHHDKVMLLGH 266

Query: 274 EDGYTPDSGMQVTIAFNLFGEKLVQRMPRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINS 333
            D Y+ D  MQVTIAFN FGE LVQRMPRCR GY HVVNN++  WEMYAIGGS  PTINS
Sbjct: 267 SDTYSRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINS 326

Query: 334 QGNRYIAPGNPNAKEVTKRVDTNAGDWSEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKAS 393
           QGNR++AP    +KEVTK  D    +W  WNWR+ GD+++NGAFF PSG   S+ Y KAS
Sbjct: 327 QGNRFLAPNIRFSKEVTKHEDAPESEWKRWNWRSSGDLLLNGAFFTPSGGAASSSYAKAS 386

Query: 394 SVAPKSAALVDQLTLNAGVFGGTRESR 421
           S+  K ++LV  LT  +G     + SR
Sbjct: 387 SLGAKPSSLVGPLTSTSGALNCRKGSR 407

[Close]

BLAST of Cp4.1LG01g24660 vs. NCBI nr
Match: XP_023524526.1 (probable pectate lyase 12 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 986 bits (2548), Expect = 0.0
Identity = 494/494 (100.00%), Postives = 494/494 (100.00%), Query Frame = 0


Query: 1   MFAAIAILLFTWFLSSSLPSLAAFSFNLTDPHLLPDPETVVYEVQRSVNDSFSRREMLSI 60
           MFAAIAILLFTWFLSSSLPSLAAFSFNLTDPHLLPDPETVVYEVQRSVNDSFSRREMLSI
Sbjct: 1   MFAAIAILLFTWFLSSSLPSLAAFSFNLTDPHLLPDPETVVYEVQRSVNDSFSRREMLSI 60

Query: 61  HSKGQSNSCQTGNPIDDCWRCGSNWQANRQRLADCSIGFGRNAMGGKGGQIYIVTDSSDS 120
           HSKGQSNSCQTGNPIDDCWRCGSNWQANRQRLADCSIGFGRNAMGGKGGQIYIVTDSSDS
Sbjct: 61  HSKGQSNSCQTGNPIDDCWRCGSNWQANRQRLADCSIGFGRNAMGGKGGQIYIVTDSSDS 120

Query: 121 DPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCIT 180
           DPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCIT
Sbjct: 121 DPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCIT 180

Query: 181 LQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSY 240
           LQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSY
Sbjct: 181 LQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSY 240

Query: 241 CTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQRM 300
           CTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQRM
Sbjct: 241 CTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQRM 300

Query: 301 PRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDW 360
           PRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDW
Sbjct: 301 PRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDW 360

Query: 361 SEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRESR 420
           SEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRESR
Sbjct: 361 SEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRESR 420

Query: 421 QSSSYPGDESFSNSGSSGSDSGGDYFGMIFGGGGVNSALPPSLSVVNMVVLTLLTILVLY 480
           QSSSYPGDESFSNSGSSGSDSGGDYFGMIFGGGGVNSALPPSLSVVNMVVLTLLTILVLY
Sbjct: 421 QSSSYPGDESFSNSGSSGSDSGGDYFGMIFGGGGVNSALPPSLSVVNMVVLTLLTILVLY 480

Query: 481 TNSIYDALLSLTAL 494
           TNSIYDALLSLTAL
Sbjct: 481 TNSIYDALLSLTAL 494

[Close]

BLAST of Cp4.1LG01g24660 vs. NCBI nr
Match: XP_022957835.1 (probable pectate lyase 12 [Cucurbita moschata] >KAG7032968.1 putative pectate lyase 12 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 978 bits (2528), Expect = 0.0
Identity = 489/494 (98.99%), Postives = 491/494 (99.39%), Query Frame = 0


Query: 1   MFAAIAILLFTWFLSSSLPSLAAFSFNLTDPHLLPDPETVVYEVQRSVNDSFSRREMLSI 60
           MFAAIAILLF+WFLSSSLPS+AAFSFNLTDPHLLPDPETV YEVQRSVNDSFSRREMLSI
Sbjct: 1   MFAAIAILLFSWFLSSSLPSMAAFSFNLTDPHLLPDPETVAYEVQRSVNDSFSRREMLSI 60

Query: 61  HSKGQSNSCQTGNPIDDCWRCGSNWQANRQRLADCSIGFGRNAMGGKGGQIYIVTDSSDS 120
           HSKGQSNSCQTGNPIDDCWRCGSNWQ NRQRLADCSIGFGRNAMGGKGGQIYIVTDSSDS
Sbjct: 61  HSKGQSNSCQTGNPIDDCWRCGSNWQDNRQRLADCSIGFGRNAMGGKGGQIYIVTDSSDS 120

Query: 121 DPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCIT 180
           DPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCIT
Sbjct: 121 DPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCIT 180

Query: 181 LQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSY 240
           LQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSY
Sbjct: 181 LQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSY 240

Query: 241 CTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQRM 300
           CTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQRM
Sbjct: 241 CTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQRM 300

Query: 301 PRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDW 360
           PRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDW
Sbjct: 301 PRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDW 360

Query: 361 SEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRESR 420
           SEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRESR
Sbjct: 361 SEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRESR 420

Query: 421 QSSSYPGDESFSNSGSSGSDSGGDYFGMIFGGGGVNSALPPSLSVVNMVVLTLLTILVLY 480
           QSSSYPGDESFSNSGSSGSD GGDYFGMIFGGGGVNSALPPSLSVVNMVVLTLLTILVLY
Sbjct: 421 QSSSYPGDESFSNSGSSGSDGGGDYFGMIFGGGGVNSALPPSLSVVNMVVLTLLTILVLY 480

Query: 481 TNSIYDALLSLTAL 494
           TNSIYDALLSLTAL
Sbjct: 481 TNSIYDALLSLTAL 494

[Close]

BLAST of Cp4.1LG01g24660 vs. NCBI nr
Match: XP_022990332.1 (probable pectate lyase 12 [Cucurbita maxima])

HSP 1 Score: 971 bits (2509), Expect = 0.0
Identity = 485/494 (98.18%), Postives = 490/494 (99.19%), Query Frame = 0


Query: 1   MFAAIAILLFTWFLSSSLPSLAAFSFNLTDPHLLPDPETVVYEVQRSVNDSFSRREMLSI 60
           M AAIAILLF+WFL+SSLPS+AAFSFNLTDPHLLPDPETV YEVQRSVNDSFSRREMLSI
Sbjct: 1   MLAAIAILLFSWFLNSSLPSMAAFSFNLTDPHLLPDPETVAYEVQRSVNDSFSRREMLSI 60

Query: 61  HSKGQSNSCQTGNPIDDCWRCGSNWQANRQRLADCSIGFGRNAMGGKGGQIYIVTDSSDS 120
           HSKGQSNSCQTGNPIDDCWRCGSNWQANRQRLADCSIGFGRNAMGGKGGQIYIVTDSSD+
Sbjct: 61  HSKGQSNSCQTGNPIDDCWRCGSNWQANRQRLADCSIGFGRNAMGGKGGQIYIVTDSSDT 120

Query: 121 DPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCIT 180
           DPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCIT
Sbjct: 121 DPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCIT 180

Query: 181 LQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSY 240
           LQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSY
Sbjct: 181 LQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSY 240

Query: 241 CTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQRM 300
           CTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQRM
Sbjct: 241 CTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQRM 300

Query: 301 PRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDW 360
           PRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDW
Sbjct: 301 PRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDW 360

Query: 361 SEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRESR 420
           SEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRESR
Sbjct: 361 SEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRESR 420

Query: 421 QSSSYPGDESFSNSGSSGSDSGGDYFGMIFGGGGVNSALPPSLSVVNMVVLTLLTILVLY 480
           QSSSY GDESFSNSGSSGSD GGDYFGMIFGGGGVNSALPPSLSVVNMVVLTLLTILVLY
Sbjct: 421 QSSSYSGDESFSNSGSSGSDGGGDYFGMIFGGGGVNSALPPSLSVVNMVVLTLLTILVLY 480

Query: 481 TNSIYDALLSLTAL 494
           TNSIY+ALLSLTAL
Sbjct: 481 TNSIYNALLSLTAL 494

[Close]

BLAST of Cp4.1LG01g24660 vs. NCBI nr
Match: KAG6602287.1 (putative pectate lyase 12, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 946 bits (2445), Expect = 0.0
Identity = 470/474 (99.16%), Postives = 471/474 (99.37%), Query Frame = 0


Query: 21  LAAFSFNLTDPHLLPDPETVVYEVQRSVNDSFSRREMLSIHSKGQSNSCQTGNPIDDCWR 80
           +AAFSFNLTDPHLLPDPETV YEVQRSVNDSFSRREMLSIHSKGQSNSCQTGNPIDDCWR
Sbjct: 1   MAAFSFNLTDPHLLPDPETVAYEVQRSVNDSFSRREMLSIHSKGQSNSCQTGNPIDDCWR 60

Query: 81  CGSNWQANRQRLADCSIGFGRNAMGGKGGQIYIVTDSSDSDPVNPRPGTLRYAVVQDEPL 140
           CGSNWQ NRQRLADCSIGFGRNAMGGKGGQIYIVTDSSDSDPVNPRPGTLRYAVVQDEPL
Sbjct: 61  CGSNWQDNRQRLADCSIGFGRNAMGGKGGQIYIVTDSSDSDPVNPRPGTLRYAVVQDEPL 120

Query: 141 WIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCITLQYISNVIIHNINIHHCIPT 200
           WIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCITLQYISNVIIHNINIHHCIPT
Sbjct: 121 WIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCITLQYISNVIIHNINIHHCIPT 180

Query: 201 GHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSYCTDGLIDAIMGSTGITISNN 260
           GHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSYCTDGLIDAIMGSTGITISNN
Sbjct: 181 GHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSYCTDGLIDAIMGSTGITISNN 240

Query: 261 YFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQRMPRCRRGYIHVVNNEFRSWEM 320
           YFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQRMPRCRRGYIHVVNNEFRSWEM
Sbjct: 241 YFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQRMPRCRRGYIHVVNNEFRSWEM 300

Query: 321 YAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDWSEWNWRTEGDIMVNGAFFVP 380
           YAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDWSEWNWRTEGDIMVNGAFFVP
Sbjct: 301 YAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDWSEWNWRTEGDIMVNGAFFVP 360

Query: 381 SGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRESRQSSSYPGDESFSNSGSSGSD 440
           SGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRESRQSSSYPGDESFSNSGSSGSD
Sbjct: 361 SGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRESRQSSSYPGDESFSNSGSSGSD 420

Query: 441 SGGDYFGMIFGGGGVNSALPPSLSVVNMVVLTLLTILVLYTNSIYDALLSLTAL 494
            GGDYFGMIFGGGGVNSALPPSLSVVNMVVLTLLTILVLYTNSIYDALLSLTAL
Sbjct: 421 GGGDYFGMIFGGGGVNSALPPSLSVVNMVVLTLLTILVLYTNSIYDALLSLTAL 474

[Close]

BLAST of Cp4.1LG01g24660 vs. NCBI nr
Match: XP_038884299.1 (probable pectate lyase 12 [Benincasa hispida])

HSP 1 Score: 912 bits (2358), Expect = 0.0
Identity = 452/496 (91.13%), Postives = 471/496 (94.96%), Query Frame = 0


Query: 1   MFAAIAILLFTWFLSSSLPSL--AAFSFNLTDPHLLPDPETVVYEVQRSVNDSFSRREML 60
           MFA   IL F WFLSSSLP L  A  +FNLT PHLLPDPETV Y+VQRSVNDSFSRR+ML
Sbjct: 1   MFATTGILFFIWFLSSSLPPLTIANLNFNLTVPHLLPDPETVAYQVQRSVNDSFSRRQML 60

Query: 61  SIHSKGQSNSCQTGNPIDDCWRCGSNWQANRQRLADCSIGFGRNAMGGKGGQIYIVTDSS 120
           SIHSKGQSNSCQTGNPIDDCWRC SNWQANRQRLADC IGFGR AMGGKGGQIYIVTDSS
Sbjct: 61  SIHSKGQSNSCQTGNPIDDCWRCDSNWQANRQRLADCGIGFGRAAMGGKGGQIYIVTDSS 120

Query: 121 DSDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGC 180
           DSDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGC
Sbjct: 121 DSDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGC 180

Query: 181 ITLQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSL 240
           ITLQYISN+IIHNINIHHC+PTGHTN+RSSPTH+GYRGKSDGDGISIFSSRNIWIDHCSL
Sbjct: 181 ITLQYISNIIIHNINIHHCVPTGHTNIRSSPTHIGYRGKSDGDGISIFSSRNIWIDHCSL 240

Query: 241 SYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQ 300
           SYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGH+DG+TPDS MQVTIAFNLFGEKLVQ
Sbjct: 241 SYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDGFTPDSAMQVTIAFNLFGEKLVQ 300

Query: 301 RMPRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAG 360
           RMPRCRRGYIHVVNN+FRSWEMYAIGGSG PTINSQGNRYIAPGNPNAKEVTKRVDTNAG
Sbjct: 301 RMPRCRRGYIHVVNNDFRSWEMYAIGGSGNPTINSQGNRYIAPGNPNAKEVTKRVDTNAG 360

Query: 361 DWSEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRE 420
           DWSEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASS+ PKSAALVDQLTLNAGVFGG+RE
Sbjct: 361 DWSEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSLPPKSAALVDQLTLNAGVFGGSRE 420

Query: 421 SRQSSSYPGDESFSNSGSSGSDSGGDYFGMIFGGGGVNSALPPSLSVVNMVVLTLLTILV 480
           SRQS+SYPGDES ++SGSSGSD GGDYFGMIFGGGG+NSA PPSLSVVN+V+LTL T+LV
Sbjct: 421 SRQSNSYPGDESTTSSGSSGSDGGGDYFGMIFGGGGMNSAPPPSLSVVNVVILTLFTVLV 480

Query: 481 LYTNSIYDALLSLTAL 494
           LYTNS YD LLSLT L
Sbjct: 481 LYTNSNYDVLLSLTTL 496

[Close]

BLAST of Cp4.1LG01g24660 vs. ExPASy TrEMBL
Match: A0A6J1H1R2 (Pectate lyase OS=Cucurbita moschata OX=3662 GN=LOC111459254 PE=3 SV=1)

HSP 1 Score: 978 bits (2528), Expect = 0.0
Identity = 489/494 (98.99%), Postives = 491/494 (99.39%), Query Frame = 0


Query: 1   MFAAIAILLFTWFLSSSLPSLAAFSFNLTDPHLLPDPETVVYEVQRSVNDSFSRREMLSI 60
           MFAAIAILLF+WFLSSSLPS+AAFSFNLTDPHLLPDPETV YEVQRSVNDSFSRREMLSI
Sbjct: 1   MFAAIAILLFSWFLSSSLPSMAAFSFNLTDPHLLPDPETVAYEVQRSVNDSFSRREMLSI 60

Query: 61  HSKGQSNSCQTGNPIDDCWRCGSNWQANRQRLADCSIGFGRNAMGGKGGQIYIVTDSSDS 120
           HSKGQSNSCQTGNPIDDCWRCGSNWQ NRQRLADCSIGFGRNAMGGKGGQIYIVTDSSDS
Sbjct: 61  HSKGQSNSCQTGNPIDDCWRCGSNWQDNRQRLADCSIGFGRNAMGGKGGQIYIVTDSSDS 120

Query: 121 DPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCIT 180
           DPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCIT
Sbjct: 121 DPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCIT 180

Query: 181 LQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSY 240
           LQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSY
Sbjct: 181 LQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSY 240

Query: 241 CTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQRM 300
           CTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQRM
Sbjct: 241 CTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQRM 300

Query: 301 PRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDW 360
           PRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDW
Sbjct: 301 PRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDW 360

Query: 361 SEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRESR 420
           SEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRESR
Sbjct: 361 SEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRESR 420

Query: 421 QSSSYPGDESFSNSGSSGSDSGGDYFGMIFGGGGVNSALPPSLSVVNMVVLTLLTILVLY 480
           QSSSYPGDESFSNSGSSGSD GGDYFGMIFGGGGVNSALPPSLSVVNMVVLTLLTILVLY
Sbjct: 421 QSSSYPGDESFSNSGSSGSDGGGDYFGMIFGGGGVNSALPPSLSVVNMVVLTLLTILVLY 480

Query: 481 TNSIYDALLSLTAL 494
           TNSIYDALLSLTAL
Sbjct: 481 TNSIYDALLSLTAL 494

[Close]

BLAST of Cp4.1LG01g24660 vs. ExPASy TrEMBL
Match: A0A6J1JIE0 (Pectate lyase OS=Cucurbita maxima OX=3661 GN=LOC111487228 PE=3 SV=1)

HSP 1 Score: 971 bits (2509), Expect = 0.0
Identity = 485/494 (98.18%), Postives = 490/494 (99.19%), Query Frame = 0


Query: 1   MFAAIAILLFTWFLSSSLPSLAAFSFNLTDPHLLPDPETVVYEVQRSVNDSFSRREMLSI 60
           M AAIAILLF+WFL+SSLPS+AAFSFNLTDPHLLPDPETV YEVQRSVNDSFSRREMLSI
Sbjct: 1   MLAAIAILLFSWFLNSSLPSMAAFSFNLTDPHLLPDPETVAYEVQRSVNDSFSRREMLSI 60

Query: 61  HSKGQSNSCQTGNPIDDCWRCGSNWQANRQRLADCSIGFGRNAMGGKGGQIYIVTDSSDS 120
           HSKGQSNSCQTGNPIDDCWRCGSNWQANRQRLADCSIGFGRNAMGGKGGQIYIVTDSSD+
Sbjct: 61  HSKGQSNSCQTGNPIDDCWRCGSNWQANRQRLADCSIGFGRNAMGGKGGQIYIVTDSSDT 120

Query: 121 DPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCIT 180
           DPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCIT
Sbjct: 121 DPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCIT 180

Query: 181 LQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSY 240
           LQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSY
Sbjct: 181 LQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSY 240

Query: 241 CTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQRM 300
           CTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQRM
Sbjct: 241 CTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQRM 300

Query: 301 PRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDW 360
           PRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDW
Sbjct: 301 PRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDW 360

Query: 361 SEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRESR 420
           SEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRESR
Sbjct: 361 SEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRESR 420

Query: 421 QSSSYPGDESFSNSGSSGSDSGGDYFGMIFGGGGVNSALPPSLSVVNMVVLTLLTILVLY 480
           QSSSY GDESFSNSGSSGSD GGDYFGMIFGGGGVNSALPPSLSVVNMVVLTLLTILVLY
Sbjct: 421 QSSSYSGDESFSNSGSSGSDGGGDYFGMIFGGGGVNSALPPSLSVVNMVVLTLLTILVLY 480

Query: 481 TNSIYDALLSLTAL 494
           TNSIY+ALLSLTAL
Sbjct: 481 TNSIYNALLSLTAL 494

[Close]

BLAST of Cp4.1LG01g24660 vs. ExPASy TrEMBL
Match: A0A5D3BPB8 (Pectate lyase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00090 PE=3 SV=1)

HSP 1 Score: 892 bits (2304), Expect = 0.0
Identity = 439/491 (89.41%), Postives = 465/491 (94.70%), Query Frame = 0


Query: 1   MFAAIAILLFTWFLSSSLPSL--AAFSFNLTDPHLLPDPETVVYEVQRSVNDSFSRREML 60
           MFA   +L F WFLS +L  L  A F+FNLT  +LLPDPETV Y+VQRSVNDSF RR+ML
Sbjct: 1   MFATTGVLFFIWFLSCTLLPLTMATFNFNLTVQNLLPDPETVAYQVQRSVNDSFFRRQML 60

Query: 61  SIHSKGQSNSCQTGNPIDDCWRCGSNWQANRQRLADCSIGFGRNAMGGKGGQIYIVTDSS 120
           S+HSKGQS+SCQTGNPIDDCWRC SNWQANRQRLADC IGFGR+AMGGKGGQIY+VTDSS
Sbjct: 61  SVHSKGQSSSCQTGNPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTDSS 120

Query: 121 DSDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGC 180
           D DPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGC
Sbjct: 121 DPDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGC 180

Query: 181 ITLQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSL 240
           ITLQYISNVIIHNINIHHC+PTGHTN+RSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSL
Sbjct: 181 ITLQYISNVIIHNINIHHCVPTGHTNIRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSL 240

Query: 241 SYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQ 300
           SYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGH+DG+TPDSGMQVTIAFNLFGEKLVQ
Sbjct: 241 SYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDGFTPDSGMQVTIAFNLFGEKLVQ 300

Query: 301 RMPRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAG 360
           RMPRCRRGYIHVVNN+FRSWEMYAIGGSG PTINSQGNRYIAPGNPNAKEVTKRVDTNAG
Sbjct: 301 RMPRCRRGYIHVVNNDFRSWEMYAIGGSGNPTINSQGNRYIAPGNPNAKEVTKRVDTNAG 360

Query: 361 DWSEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRE 420
           DWSEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASS+ PKSAALVDQLTLNAGVFGG+RE
Sbjct: 361 DWSEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSLPPKSAALVDQLTLNAGVFGGSRE 420

Query: 421 SRQSSSYPGDESFSNSGSSGSDSGGDYFGMIFGGGGVNSALPPSLSVVNMVVLTLLTILV 480
           +RQSSSYPGDE+ S+SGSSGSD GGDYFGMIFGGGG+N+A PPSLS VNMV+LTL T+L+
Sbjct: 421 TRQSSSYPGDETSSSSGSSGSDGGGDYFGMIFGGGGINNAPPPSLSAVNMVILTLFTVLI 480

Query: 481 LYTNSIYDALL 489
           LYTN+ YDALL
Sbjct: 481 LYTNN-YDALL 490

[Close]

BLAST of Cp4.1LG01g24660 vs. ExPASy TrEMBL
Match: A0A1S3C4R4 (Pectate lyase OS=Cucumis melo OX=3656 GN=LOC103496461 PE=3 SV=1)

HSP 1 Score: 892 bits (2304), Expect = 0.0
Identity = 439/491 (89.41%), Postives = 465/491 (94.70%), Query Frame = 0


Query: 1   MFAAIAILLFTWFLSSSLPSL--AAFSFNLTDPHLLPDPETVVYEVQRSVNDSFSRREML 60
           MFA   +L F WFLS +L  L  A F+FNLT  +LLPDPETV Y+VQRSVNDSF RR+ML
Sbjct: 1   MFATTGVLFFIWFLSCTLLPLTMATFNFNLTVQNLLPDPETVAYQVQRSVNDSFFRRQML 60

Query: 61  SIHSKGQSNSCQTGNPIDDCWRCGSNWQANRQRLADCSIGFGRNAMGGKGGQIYIVTDSS 120
           S+HSKGQS+SCQTGNPIDDCWRC SNWQANRQRLADC IGFGR+AMGGKGGQIY+VTDSS
Sbjct: 61  SVHSKGQSSSCQTGNPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTDSS 120

Query: 121 DSDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGC 180
           D DPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGC
Sbjct: 121 DPDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGC 180

Query: 181 ITLQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSL 240
           ITLQYISNVIIHNINIHHC+PTGHTN+RSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSL
Sbjct: 181 ITLQYISNVIIHNINIHHCVPTGHTNIRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSL 240

Query: 241 SYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQ 300
           SYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGH+DG+TPDSGMQVTIAFNLFGEKLVQ
Sbjct: 241 SYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDGFTPDSGMQVTIAFNLFGEKLVQ 300

Query: 301 RMPRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAG 360
           RMPRCRRGYIHVVNN+FRSWEMYAIGGSG PTINSQGNRYIAPGNPNAKEVTKRVDTNAG
Sbjct: 301 RMPRCRRGYIHVVNNDFRSWEMYAIGGSGNPTINSQGNRYIAPGNPNAKEVTKRVDTNAG 360

Query: 361 DWSEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRE 420
           DWSEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASS+ PKSAALVDQLTLNAGVFGG+RE
Sbjct: 361 DWSEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSLPPKSAALVDQLTLNAGVFGGSRE 420

Query: 421 SRQSSSYPGDESFSNSGSSGSDSGGDYFGMIFGGGGVNSALPPSLSVVNMVVLTLLTILV 480
           +RQSSSYPGDE+ S+SGSSGSD GGDYFGMIFGGGG+N+A PPSLS VNMV+LTL T+L+
Sbjct: 421 TRQSSSYPGDETSSSSGSSGSDGGGDYFGMIFGGGGINNAPPPSLSAVNMVILTLFTVLI 480

Query: 481 LYTNSIYDALL 489
           LYTN+ YDALL
Sbjct: 481 LYTNN-YDALL 490

[Close]

BLAST of Cp4.1LG01g24660 vs. ExPASy TrEMBL
Match: A0A6J1FLS3 (Pectate lyase OS=Cucurbita moschata OX=3662 GN=LOC111445375 PE=3 SV=1)

HSP 1 Score: 884 bits (2283), Expect = 0.0
Identity = 442/495 (89.29%), Postives = 466/495 (94.14%), Query Frame = 0


Query: 1   MFAAIAILLFTWFLSSSLP--SLAAFSFNLTDPHLLPDPETVVYEVQRSVNDSFSRREML 60
           MFA   IL F W LSSSLP  ++A F+FNLT PHLLPDPETV Y+VQR+VNDSFSRR+ML
Sbjct: 1   MFATTGILFFIWVLSSSLPPPAMATFAFNLTVPHLLPDPETVAYQVQRAVNDSFSRRQML 60

Query: 61  SIHSKGQSNSCQTGNPIDDCWRCGSNWQANRQRLADCSIGFGRNAMGGKGGQIYIVTDSS 120
           S++SK QS+SCQTGNPIDDCWRC SNWQANRQRLADC IGFGR+AMGGKGGQIY+VTDSS
Sbjct: 61  SVNSKDQSSSCQTGNPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTDSS 120

Query: 121 DSDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGC 180
           DSDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGC
Sbjct: 121 DSDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGC 180

Query: 181 ITLQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSL 240
           +TLQYISNVIIHNINIHHCIPTGHTN+RSSPTH+GYRGKSDGDGISIFSSRNIWIDHCSL
Sbjct: 181 VTLQYISNVIIHNINIHHCIPTGHTNIRSSPTHIGYRGKSDGDGISIFSSRNIWIDHCSL 240

Query: 241 SYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQ 300
           SYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGH+DGY+PDS MQVTIAFNLFGEKLVQ
Sbjct: 241 SYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDGYSPDSAMQVTIAFNLFGEKLVQ 300

Query: 301 RMPRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAG 360
           RMPRCRRGY HVVNN+FRSWEMYAIGGSG PTINSQGNRYIAPGNPNAKEVTKRVDTNAG
Sbjct: 301 RMPRCRRGYFHVVNNDFRSWEMYAIGGSGDPTINSQGNRYIAPGNPNAKEVTKRVDTNAG 360

Query: 361 DWSEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRE 420
           DWSEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVD+LTLNAGVFGG RE
Sbjct: 361 DWSEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDRLTLNAGVFGGARE 420

Query: 421 SRQSSSYPGDESFSNSGSSGSDSGGDYFGMIFGGGG-VNSALPPS-LSVVNMVVLTLLTI 480
           +RQS SYPGDES S+S SSGSD GGDYFGMIFGGGG VNSA PP  LSVVNM++L+LLT+
Sbjct: 421 NRQSYSYPGDESSSSSTSSGSDGGGDYFGMIFGGGGGVNSAPPPPCLSVVNMLMLSLLTV 480

Query: 481 LVLYTNSIYDALLSL 491
           LVLYTNS   ALLSL
Sbjct: 481 LVLYTNSYDSALLSL 495

[Close]

BLAST of Cp4.1LG01g24660 vs. TAIR 10
Match: AT5G04310.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 601.7 bits (1550), Expect = 5.4e-172
Identity = 307/499 (61.52%), Postives = 368/499 (73.75%), Query Frame = 0


Query: 5   IAILLFTWFLSSS----LPSLAAFSFNLTDPHLLPDPETVVYEVQRSVNDSFSRREMLSI 64
           I I+ F   +S S      S +A  FNL+ PH  P PE VV  VQR +NDS SRR++L+ 
Sbjct: 17  ICIIWFCLLVSLSHHGRASSTSASIFNLSLPHQHPFPEHVVLNVQRKLNDSLSRRQLLTY 76

Query: 65  HSKGQSN------SCQTGNPIDDCWRCGSNWQANRQRLADCSIGFGRNAMGGKGGQIYIV 124
                +       SC TGNPIDDCWRC  NW ANRQRLADCSIGFG+  +GGKGGQ Y+V
Sbjct: 77  QQDDGTTASSPIPSCITGNPIDDCWRCDPNWSANRQRLADCSIGFGQGTLGGKGGQFYLV 136

Query: 125 TDSSDSDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHIT 184
           TDSSD+D  NP PGTLR+AV+Q EPLWI+F++DM IKLK+EL++ SYKT+DGRG N+ IT
Sbjct: 137 TDSSDNDAANPIPGTLRHAVIQPEPLWIIFSSDMGIKLKHELIIGSYKTIDGRGTNIQIT 196

Query: 185 GGGCITLQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWID 244
           G GC+T+Q +S+VIIHN++IHHC P+G+T V SSPTHVG+RG SDGDGIS+ +S +IW+D
Sbjct: 197 GHGCLTIQQVSHVIIHNVHIHHCKPSGNTLVASSPTHVGFRGVSDGDGISVSASHHIWVD 256

Query: 245 HCSLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGE 304
           HCSL YC DGLID I+ ST +TISNNYFSHHDEVMLLGH+D YT D GMQVTIAFN FGE
Sbjct: 257 HCSLGYCADGLIDVILASTAVTISNNYFSHHDEVMLLGHDDRYTADKGMQVTIAFNHFGE 316

Query: 305 KLVQRMPRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVD 364
            LVQRMPRCR GYIHVVNN+F +WEMYAIGGS  PTINSQGNRY AP +PNAKEVTKRVD
Sbjct: 317 GLVQRMPRCRHGYIHVVNNDFTAWEMYAIGGSASPTINSQGNRYTAPIDPNAKEVTKRVD 376

Query: 365 TNAGDWSEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFG 424
           +N   WS WNWRTEGD+MVNGAFFVPSG+G+S  Y +A+SV PK+AA++DQLT+NAGVFG
Sbjct: 377 SNEKHWSGWNWRTEGDVMVNGAFFVPSGDGVSPAYARATSVQPKAAAIIDQLTVNAGVFG 436

Query: 425 G-TRESRQSSSYPG------------DESFSNSGSSGSDSGGDYFGMIFGGGGVNSALPP 481
             +  + Q  S+PG             +S    G SGSDS    F +IFG      AL P
Sbjct: 437 DPSGRNGQGGSFPGITNGGGTITRGYSKSGPAGGGSGSDSDDGLFTLIFGNNSGAVALRP 496

[Close]

BLAST of Cp4.1LG01g24660 vs. TAIR 10
Match: AT3G53190.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 600.1 bits (1546), Expect = 1.6e-171
Identity = 307/480 (63.96%), Postives = 360/480 (75.00%), Query Frame = 0


Query: 7   ILLFTWFLSSSLPSLAAFSFN---LTDPHLLPDPETVVYEVQRSVNDSFSRREMLSIHSK 66
           +L F+ FL   +P +     N   L  PH  PDPE V Y+VQ  VN S +RR+ L    +
Sbjct: 9   VLFFSLFL--LVPQMVFSMLNRTLLLIPH--PDPELVAYQVQWKVNASITRRQALDTTDQ 68

Query: 67  GQSNSCQTGNPIDDCWRCGSNWQANRQRLADCSIGFGRNAMGGKGGQIYIVTDSSDSDPV 126
             S  C TGNPIDDCW+C  NW  NRQ LADC IGFG+ A+GGKGGQ Y VTDSSD D V
Sbjct: 69  AGSTPCITGNPIDDCWKCDPNWPNNRQGLADCGIGFGQYALGGKGGQFYFVTDSSDDDAV 128

Query: 127 NPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCITLQY 186
           NP+PGTLRY V+Q+EPLWIVF ++M IKLK EL+ NSYKTLDGRGANVHI GGGCITLQY
Sbjct: 129 NPKPGTLRYGVIQEEPLWIVFPSNMMIKLKQELIFNSYKTLDGRGANVHIVGGGCITLQY 188

Query: 187 ISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSYCTD 246
           +SN+IIHNI+IHHC  +G+TNVRSSPTH G+R KSDGDGISIF S++IWIDHCSLS C D
Sbjct: 189 VSNIIIHNIHIHHCYQSGNTNVRSSPTHYGFRTKSDGDGISIFGSKDIWIDHCSLSRCKD 248

Query: 247 GLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQRMPRC 306
           GLIDA+MGSTGITISNN+FSHH+EVMLLGH D Y PDSGMQVTIAFN FGEKL+QRMPRC
Sbjct: 249 GLIDAVMGSTGITISNNFFSHHNEVMLLGHSDHYEPDSGMQVTIAFNHFGEKLIQRMPRC 308

Query: 307 RRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDWSEW 366
           RRGYIHVVNN+F  WEMYAIGGSG PTINSQGNRY AP NP AKEVTKRV+T  GDW  W
Sbjct: 309 RRGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPTNPFAKEVTKRVETPDGDWKGW 368

Query: 367 NWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRESRQSS 426
           NWR+EGDI+VNGAFFV SGEG    Y KA SV PKSA+ + Q+T ++GV G    +    
Sbjct: 369 NWRSEGDILVNGAFFVASGEGAEMRYEKAYSVEPKSASFITQITFHSGVLGVGGRNNNLG 428

Query: 427 SYPGDESFSNSGSSGSDSGGDYFGMIFGGGGVNSALPPSLSVVNMVVLTLLTILVLYTNS 484
            +    +  + G+SG DS  DY   + G G  N     S SV+ + +L+ ++ LV++T+S
Sbjct: 429 MW---TTTGSEGTSGLDSYNDYTDEMSGAGSTNRL---SFSVL-VFLLSSISYLVVFTSS 477

[Close]

BLAST of Cp4.1LG01g24660 vs. TAIR 10
Match: AT3G54920.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 572.4 bits (1474), Expect = 3.5e-163
Identity = 295/479 (61.59%), Postives = 358/479 (74.74%), Query Frame = 0


Query: 7   ILLFTWFLSSSLPSLAAFSFNLTDPHLLPDPETVVYEVQRSVNDSFSRREM------LSI 66
           + LF   LS++ P       NLT PH  P P++V   V RSVN+S +RR++       S 
Sbjct: 13  LCLFFTLLSATKP------LNLTLPHQHPSPDSVALHVIRSVNESLARRQLSSPSSSSSS 72

Query: 67  HSKGQSNSCQTGNPIDDCWRCG-SNWQANRQRLADCSIGFGRNAMGGKGGQIYIVTDSSD 126
            S   S+SC+TGNPIDDCWRC  ++W  NRQRLADCSIGFG   +GGK G+IY+VTDSSD
Sbjct: 73  SSSSSSSSCRTGNPIDDCWRCSDADWSTNRQRLADCSIGFGHGTLGGKNGKIYVVTDSSD 132

Query: 127 SDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCI 186
           ++P NP PGTLRY V+Q+EPLWIVF+++M I+LK EL++NSYKTLDGRG+ VHITG GC+
Sbjct: 133 NNPTNPTPGTLRYGVIQEEPLWIVFSSNMLIRLKQELIINSYKTLDGRGSAVHITGNGCL 192

Query: 187 TLQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLS 246
           TLQY+ ++IIHN++I+ C P+              RG+SDGDGISIF S+ IW+DHCS+S
Sbjct: 193 TLQYVQHIIIHNLHIYDCKPSAGFE---------KRGRSDGDGISIFGSQKIWVDHCSMS 252

Query: 247 YCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQR 306
           +CTDGLIDA+MGST ITISNNYF+HHDEVMLLGH+D Y PD+GMQVTIAFN FG+ LVQR
Sbjct: 253 HCTDGLIDAVMGSTAITISNNYFTHHDEVMLLGHDDNYAPDTGMQVTIAFNHFGQGLVQR 312

Query: 307 MPRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDT-NAG 366
           MPRCRRGYIHVVNN+F  W+MYAIGGSG PTINSQGNRY AP +P+AKEVTKRVD+ + G
Sbjct: 313 MPRCRRGYIHVVNNDFTEWKMYAIGGSGNPTINSQGNRYSAPSDPSAKEVTKRVDSKDDG 372

Query: 367 DWSEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDQLTLNAGVFGGTRE 426
           +WS WNWRTEGD+M NGAFFV SGEG+S+MY KASSV PK+A+LVDQLT NAGVFGG R+
Sbjct: 373 EWSNWNWRTEGDLMENGAFFVASGEGMSSMYSKASSVDPKAASLVDQLTRNAGVFGGPRD 432

Query: 427 SRQSSS-----YPGDESFSNSGSSGSDSGGDYFGMIFGGG---GVNSALPPSLSVVNMV 470
            +  S      Y GD      GSSG  SGG   GM   GG   G +S+     +V  M+
Sbjct: 433 DQGQSGNSYSPYGGDG--GGGGSSGGSSGG---GMDVMGGTTRGSSSSSGDDSNVFQMI 471

[Close]

BLAST of Cp4.1LG01g24660 vs. TAIR 10
Match: AT4G13210.2 (Pectin lyase-like superfamily protein )

HSP 1 Score: 519.2 bits (1336), Expect = 3.5e-147
Identity = 245/389 (62.98%), Postives = 295/389 (75.84%), Query Frame = 0


Query: 27  NLTD----PHLLPDPETVVYEVQRSVNDSFSRREMLSIHSKGQSNSCQTGNPIDDCWRCG 86
           NL+D     H + DPE +   V  S+ +S  RR++      G  +SC TGNPIDDCWRC 
Sbjct: 46  NLSDGEWHEHAVKDPEEIAAMVDMSIRNSTYRRKL------GFFSSCSTGNPIDDCWRCD 105

Query: 87  SNWQANRQRLADCSIGFGRNAMGGKGGQIYIVTDSSDSDPVNPRPGTLRYAVVQDEPLWI 146
             W   R+RLADC+IGFGRNA+GG+ G+ YIVTD SD DPV P+PGTLRYAV+QDEPLWI
Sbjct: 106 KKWHRRRKRLADCAIGFGRNAVGGRDGRYYIVTDPSDHDPVTPKPGTLRYAVIQDEPLWI 165

Query: 147 VFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCITLQYISNVIIHNINIHHCIPTGH 206
           VF  DM I L  EL+MNS+KT+DGRG NVHI GG C+T+QY++N+IIH INIH C  TG+
Sbjct: 166 VFKRDMVITLSQELIMNSFKTIDGRGVNVHIAGGACLTVQYVTNIIIHGINIHDCKRTGN 225

Query: 207 TNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSYCTDGLIDAIMGSTGITISNNYF 266
             VRSS +H G+R  +DGDGISIF S +IWIDH SLS C DGLIDAIMGST ITISNNY 
Sbjct: 226 AMVRSSESHYGWRTMADGDGISIFGSSHIWIDHNSLSSCADGLIDAIMGSTAITISNNYL 285

Query: 267 SHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKLVQRMPRCRRGYIHVVNNEFRSWEMYA 326
           +HH+E +LLGH D YT D  MQVTIA+N FGE L+QRMPRCR GY HVVNN++  WEMYA
Sbjct: 286 THHNEAILLGHTDSYTRDKMMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYA 345

Query: 327 IGGSGGPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDWSEWNWRTEGDIMVNGAFFVPSG 386
           IGGS  PTINSQGNR++APGN  AKEVTKRV    G+W+ WNWR++GD+M+NGA+F  SG
Sbjct: 346 IGGSANPTINSQGNRFLAPGNRFAKEVTKRVGAGKGEWNNWNWRSQGDLMLNGAYFTSSG 405

Query: 387 EGLSNMYVKASSVAPKSAALVDQLTLNAG 412
            G S  Y +ASS+A KS++LV  LT ++G
Sbjct: 406 AGASANYARASSLAAKSSSLVGMLTSSSG 428

[Close]

BLAST of Cp4.1LG01g24660 vs. TAIR 10
Match: AT4G13210.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 518.8 bits (1335), Expect = 4.6e-147
Identity = 242/380 (63.68%), Postives = 291/380 (76.58%), Query Frame = 0


Query: 32  HLLPDPETVVYEVQRSVNDSFSRREMLSIHSKGQSNSCQTGNPIDDCWRCGSNWQANRQR 91
           H + DPE +   V  S+ +S  RR++      G  +SC TGNPIDDCWRC   W   R+R
Sbjct: 18  HAVKDPEEIAAMVDMSIRNSTYRRKL------GFFSSCSTGNPIDDCWRCDKKWHRRRKR 77

Query: 92  LADCSIGFGRNAMGGKGGQIYIVTDSSDSDPVNPRPGTLRYAVVQDEPLWIVFAADMTIK 151
           LADC+IGFGRNA+GG+ G+ YIVTD SD DPV P+PGTLRYAV+QDEPLWIVF  DM I 
Sbjct: 78  LADCAIGFGRNAVGGRDGRYYIVTDPSDHDPVTPKPGTLRYAVIQDEPLWIVFKRDMVIT 137

Query: 152 LKYELMMNSYKTLDGRGANVHITGGGCITLQYISNVIIHNINIHHCIPTGHTNVRSSPTH 211
           L  EL+MNS+KT+DGRG NVHI GG C+T+QY++N+IIH INIH C  TG+  VRSS +H
Sbjct: 138 LSQELIMNSFKTIDGRGVNVHIAGGACLTVQYVTNIIIHGINIHDCKRTGNAMVRSSESH 197

Query: 212 VGYRGKSDGDGISIFSSRNIWIDHCSLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLL 271
            G+R  +DGDGISIF S +IWIDH SLS C DGLIDAIMGST ITISNNY +HH+E +LL
Sbjct: 198 YGWRTMADGDGISIFGSSHIWIDHNSLSSCADGLIDAIMGSTAITISNNYLTHHNEAILL 257

Query: 272 GHEDGYTPDSGMQVTIAFNLFGEKLVQRMPRCRRGYIHVVNNEFRSWEMYAIGGSGGPTI 331
           GH D YT D  MQVTIA+N FGE L+QRMPRCR GY HVVNN++  WEMYAIGGS  PTI
Sbjct: 258 GHTDSYTRDKMMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTI 317

Query: 332 NSQGNRYIAPGNPNAKEVTKRVDTNAGDWSEWNWRTEGDIMVNGAFFVPSGEGLSNMYVK 391
           NSQGNR++APGN  AKEVTKRV    G+W+ WNWR++GD+M+NGA+F  SG G S  Y +
Sbjct: 318 NSQGNRFLAPGNRFAKEVTKRVGAGKGEWNNWNWRSQGDLMLNGAYFTSSGAGASANYAR 377

Query: 392 ASSVAPKSAALVDQLTLNAG 412
           ASS+A KS++LV  LT ++G
Sbjct: 378 ASSLAAKSSSLVGMLTSSSG 391

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g24660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SCP2	2.2e-170	63.96	Probable pectate lyase 12 OS=Arabidopsis thaliana OX=3702 GN=At3g53190 PE=2 SV=2	[more]
Q93Z04	5.0e-162	61.59	Probable pectate lyase 13 OS=Arabidopsis thaliana OX=3702 GN=PMR6 PE=1 SV=1	[more]
Q9SVQ6	5.0e-146	62.98	Putative pectate lyase 14 OS=Arabidopsis thaliana OX=3702 GN=At4g13210 PE=3 SV=2	[more]
Q944R1	1.6e-144	63.59	Probable pectate lyase 15 OS=Arabidopsis thaliana OX=3702 GN=At4g13710 PE=2 SV=1	[more]
Q9C5M8	1.6e-144	61.50	Probable pectate lyase 18 OS=Arabidopsis thaliana OX=3702 GN=At4g24780 PE=2 SV=2	[more]

BLAST of Cp4.1LG01g24660 vs. NCBI nr


Match Name	Identity	Description
XP_023524526.1	100.00	probable pectate lyase 12 [Cucurbita pepo subsp. pepo]	[more]
XP_022957835.1	98.99	probable pectate lyase 12 [Cucurbita moschata] >KAG7032968.1 putative pectate ly...	[more]
XP_022990332.1	98.18	probable pectate lyase 12 [Cucurbita maxima]	[more]
KAG6602287.1	99.16	putative pectate lyase 12, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_038884299.1	91.13	probable pectate lyase 12 [Benincasa hispida]	[more]

BLAST of Cp4.1LG01g24660 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1H1R2	98.99	Pectate lyase OS=Cucurbita moschata OX=3662 GN=LOC111459254 PE=3 SV=1	[more]
A0A6J1JIE0	98.18	Pectate lyase OS=Cucurbita maxima OX=3661 GN=LOC111487228 PE=3 SV=1	[more]
A0A5D3BPB8	89.41	Pectate lyase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00090 ...	[more]
A0A1S3C4R4	89.41	Pectate lyase OS=Cucumis melo OX=3656 GN=LOC103496461 PE=3 SV=1	[more]
A0A6J1FLS3	89.29	Pectate lyase OS=Cucurbita moschata OX=3662 GN=LOC111445375 PE=3 SV=1	[more]

BLAST of Cp4.1LG01g24660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G04310.1	5.4e-172	61.52	Pectin lyase-like superfamily protein	[more]
AT3G53190.1	1.6e-171	63.96	Pectin lyase-like superfamily protein	[more]
AT3G54920.1	3.5e-163	61.59	Pectin lyase-like superfamily protein	[more]
AT4G13210.2	3.5e-147	62.98	Pectin lyase-like superfamily protein	[more]
AT4G13210.1	4.6e-147	63.68	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018082	AmbAllergen	PRINTS	PR00807	AMBALLERGEN	coord: 119..144 score: 63.74 coord: 363..387 score: 51.24 coord: 95..112 score: 58.47 coord: 155..171 score: 67.79 coord: 392..415 score: 29.17 coord: 299..318 score: 62.86 coord: 219..240 score: 65.15 coord: 321..340 score: 74.29
IPR002022	Pectate lyase	SMART	SM00656	amb_all	coord: 147..344 e-value: 2.4E-89 score: 312.8
IPR002022	Pectate lyase	PFAM	PF00544	Pectate_lyase_4	coord: 155..324 e-value: 4.8E-22 score: 78.6
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 72..414 e-value: 2.7E-118 score: 396.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 416..438
None	No IPR available	PANTHER	PTHR31683:SF122	PECTATE LYASE	coord: 5..432
IPR045032	Pectin lyase family	PANTHER	PTHR31683	PECTATE LYASE 18-RELATED	coord: 5..432
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 73..412

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g24660.1	Cp4.1LG01g24660.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045490	pectin catabolic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0030570	pectate lyase activity