Cp4.1LG01g24620 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g24620
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	SHUGOSHIN 2-like isoform X1
Location	Cp4.1LG01: 18809532 .. 18817012 (-)
RNA-Seq Expression	Cp4.1LG01g24620
Synteny	Cp4.1LG01g24620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGACGTGCGTAGGGCTTGATCGGACGTTAGTGTGACCGGTAGGGATACAGTGGTGAATGTTGATGTTGTGAATGATTACATTCGAGATGTACTGAAGTGTGATGCAACCGCCGCCGGTTATGTGGACATTCGCGCCGCGGCCATCTAGGGTTTTGTAACTGTTCATCATGAGTTCGTACTTGAGTTTGATAGTCATGTCTGCAGCAAAGACGATCCAGAGAGGTTCATCTTGAACCACAGCGTAGCGGAGAGTTCCAGGGCGAGGGTTTACAGGGTCGGAATCGGAGGAATCTGTAACTATGTAGATCTGACCTCCTTTACCTCCCATGGCGTTTCGGCCAAATCCAATGCTGCAATCTGCAAGCCGTTGGCGATTGGCTTGCCAGTTCGAACCGCAGCGCCAACAATCATCGATAGGGTTTCCAGTTTGACAGGAATTCGATTGACCTTTAGAGTGAATCGACAGCATTTCCCTTCTTGAAAATGAATCATTCACACTCCTGCAAGAAACATAGATATCACGAAATTAGTGGGAAGGAAGCCATTGAAGCAGGGGACTACACCTTTGAGCAGAACAACAATGCACACAAGGTGTTTGTTAAAATGCCTAAACAAGAACAACTGCAGAACCCCATTAGAGGCATGTTCTGGACAAAGTCTGAATCAGAGGAAACTTGCTTGTTTACCTCTGAACTTCATAAACAACAGTTTCAGGATCTGGAAGAAGATGTGGGTCAGTGAGATTGAAACTGAAAGCTGCCAGAGAAGGCAGAGAGGAGCTCAAAAACCAGGTGAACAACAGAATGGCAATGGCAGCAAACATGCCTGCTTGTAGATTTTGTTGAAATGAAGAACCAGAACAAGAACAAGAACAAGAAGAACTCTATTTCAGGTACGTTCTTCTTGAAATGAACATGAACAAGAACAAGAACACTGCTTAATAACTAAACTATACATGAATCTGGTAACAAAACAACTTGGGAACAATGGGAAATGGCGAAAGAACACTTTAGATTCTCTTTCTTTGAAAAGATTATTCTAAAAAAGGGTATAATCCAGAGAGACAAGGAGGGAACGTGGGCTTTCTTCTCCAATTGTTGAACCCATTCTTCCTTCCTTTTCTTTCTTCTGGTTCTGTTTCTGTCTGTGCATTAAAAGTTCTCTGCTCCGGTGAGAGAGACAGTCTGTTTAATGTTCCTCTGCTTTCATGTTATTCTTTATTTTTATTCTTCATCATTTTTTTTTTTTTTTTTTTGGATCTTGATTAGTTTCTTAAAATATTGATTAGTTTCTTAAACGTGGGTTGGAGAATGAAAGTTAGGCATCATGGATTTATAAACAAATAATACTCTCTCCATTGGTGTCTTATGTTCAAAATGGACAATATCATACTATTTTAGAGAGTTGTATTCGTCTAACATAGTGTTATTGAATTCTTAATTGCATCTTATTATAAAGCTGTTTCAAGATTTTTATGAATGTGATGATATTTCGTTTTATTTGATGATGAAATAAGGATTTAAAAAAATTTGGATTTTTGAGAGAGATAGAAAATGTTAATTTGAAAACTATTTTAGTGACTTTTTTTTAAAAAAAAATTATCTTAAAACACGACCAAATGCTCAATTATTATTATTTTTTGCAAAAAAAAAAAAAAAAAAAAAAAAATTTTTTTTTGAAAGAATTTAAGGGCATAAAAAAGACCCACAAAAGGAAGTNAATAATTTTTGGAGGTTGAATGGTATTTTTAATTTTTAATTTTAATTTTATTATTATTATTATTTTGCTTTTTAAAAAACTATGATGGGAGCTGAATCTTCATTTAATTACATTTTAATTTACAAAAAATGCAAGAAATAATATATATATATATATATTATTATTATTATTATTTTGCTTTTTTAAAAATTATGATGGGAGCTGAATCTTCATTTAATTACATTTTAATTTACAAAAAATGCAAGAAATAATATATATATATATATATTATTATTATTATTATTTTGCTTTTTTAAAAATTATGATGGGAGCTGAATCTTCATTTAATTACATTTTAATTTACAAAAAATGCAAGAAATAATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTAATTTTTTTTTAAAAGGGTCTAATTGTCAATTACTTCACCCTCTAATTAGTTCCATCAACTTGCATTAAATTAAAATTATATTTTATTTTATTTCATTTTTCTATAAAACATTATTTTCATGTTAGCAATGATTTAGGAACAATTAGGTAGACAAAGGTCAAATAATTAAAAAAAAAATTGGGGTATTTTAAGTCTTATTTAAGGATGTTGGTAGAGAATGATTATAGATGCAAAATTTTAAAAATGAGTAAATTATTTGATTAAAATTTACAAAAGACCCTTTATTTCCATCACTATCCTTGAAAAATTAAATTTTCTCTAATTAATATATAGTTTTTCTTGATAAATCCATATATTAGGGGGATATTTTTGTAAATTTCCTTATCTGTGACAATTAAATGCACAAGAATATGAATTATGTTGCCCTATATTTGAAAAAGTGGTGGCCTAGTGAGACCTTTTAAGGTAATAAAGATGAGATCAAAATAAATAAATAAATAAATAAATAAGCTTGGAAAGTGACATTCCCACTCCTTTATTAGGGTCCCAATAATATGAAATTAATTTAAATTATAGCAATATATTATGTTAATTTAACCTACGGAATCAGTTTTGCAGGATGCCATGAAAAATCTTCATTTATTGAAGAGCGAGAGGAAGAAAGTGAGAAAAATTTAGTTCCATTAGATAAACGAGACCGAGATCGAGACCGAGGACAAAGATTGTAACAGGTGGTGGGGACCCTATCCTGTAGATATCTCTAATTTAATTCATTTTTTATTACGAGTGCTCCAAAATATATTTTAAAAAATTTTACTCATCTTTAAATTAATTATTTATTTCTTATTTCTTAATATATATATATAATATATATATATTCAGCGTAGAAAGGTAGTGGAAAAAAGAAAAAAAAAAAAAAGTAAGGTGGGCCAAGCCCAATAGGATGTATTGATAATGATAGGTCCAGAATGGCCCAATTAGATAGCCCATCGGCCCATCAGAAATGCTGGTTCGGTACACGTACGAAGATTTAAATTAGGTTCGGAACTTACTTCGGACAGCCGTTGTGCTCTCGATTTGAATTTTACAATTGTAGCCTCGAACTTTTATCCATTTCGCGCTCAATCCTTAGAATTCATCTCTCTTCAGTCTTCTCTCTTAACAGAAGGAACTCTGTCCTTCTTTGCAAGATCTGTTGTTTAAGCAGAAAGATTTTAGCGTTCGACCGTAGTTTCTCGAGCATGGAGGGTATAATTTCCCACGATTCAGAGAACTACGATGTTGGAGGTACTTTTTGTTTTTTATTTCTTGATCTTTTCCCTGTAAATTTTTTCTCAAATTCTTCAGATTCCTGTTTGTTTCCGTTTGATTTGTTCTCTGCCTGTTGGATTTTCCATTAATCATTCGGGTTCTAGGAACTGAGGTTGCTTAATTCGAACCCTAATTGAATGTCGGGGTTTATATGATTTTCAAAGGACTCTAGGTTTTGGGTGTATGCCATTACGTTTTTGTAAATTTTATGGAGAATAATTCAATTTAGGTGAACTACCTCAAAATCGCTCTTCGCAAATTGAAGTGAGTTTTTCACTAGTTTTAGTAACCGGGAAAAGTTGGTTTTAGGTGAAAACATGAAATTAACGGGAGAGAAAATTTTGAAGAGCTGCAAAGTAGGAGATGGGCAGAGAAAACAGCTTTTGGATATAAGTAACTTGAAGGAGCAACCAATAGTGCAGAAGCGAGATATGAAGCAGCAGCCGAGTTTGCTTATGAACAATGAATATGTTGATAAATTACAGAAGGTACTCTTGATGGTGGTTTATTAGCTAGCATGTTGTTGAATTGGCTAACCTTATTGACATTGTTTTGGATTGTTTTTCCAGGAAAATATGGCACTCATGCGAGTTCTGGCAGAAAGAAAGTATCCTTGTGATAGTTGCATTGATCCACTGTTCTTCATTTCGAGTCTTTTTTTTTATTTTTTTTATTTTTTCTTTGGTTGTATATATTTTCAAAATCTNTGTGTGCGTGTATTTATAAGTCCATTAAACACGAAATAATTGAGATAAGTGGAAATGAGTTAGAGAAATTGAGAATCAATTTTCAGAAATTGCAGCAACAGAATCTGCAACTTGCCCAAGCAAACAGCCAAATGTTAGCGGTAATCTTGCACCTGCTTCCATTTTTTATCAATTGTTCATGGCAACCTAGTCGCCTAGAAATTGATTTATGATAATGTTCTTCATTATGTGACGTTTTTTCTTTCTAATTTTAGGAACTTAATTCGAGCAAAGACAGGGTAAATCAAAATTCTGCTATCTAAAATTTTATTTAGCTTGCATTTGCCCATTAAGTTGCAGCATATACTGAAACTAGTTTAATCTTCTGCAGCTGAAAGCGTTTCAGCATGAACTTGGTTGTAAAAATGGCGTTCTTATGGCTAGAAATCTGGATTTGGAGGTTAGTTTAATCTTATATTGGTCATTTCATGTTTTAAATTAAGTGTTTATTGATCACTGAGATTGAAACTTTTCTCCCCAGAGAAAAGGAAAATTAGCAACACTCCAAACTGGAGAGGTACATCTAAACAGTACTATTGTTTTCTTTTGTCAACTTTTCTTTAGCTGCTTACGCGTTTCTTATCTCTACCTCAAGGTAGGGACTACCAAATGTAGTGAGGCAGAGGAATCTATGAATGCAGATAAGGATAATAAGCCTTGCAAAACTAACAGGCGACGAAAATCCAGAAGAGAATGTAAGTGTCAGTGCATGAATTTACCATCGGCTTCAGGATATTCATATTGTCATTTTTTAAAAGGGATTCTTCTCTGAATGTAGCTTTTGGCGGCGCTTCTGTTCTTCAAACAGAGGTTCAGAAGGTTGAAGGCAAGAGGTTTGTTCATGGATGTTTAATTGCTTTATTTGGGCTTATCTGATTATTGAGTGTACAAAAGACAGATCGAACATGATCTTGATGAATTTCGAACAGGCCCTGTTTTAGAAGGCAATCTGCAAAATTCAAAACAGAGGAATCAGTGAAGGATATCTTGGAGACAGAAAATTCCAGTTCTACCGATGCTTCTCAATGTATACAGACTTCAATTCTTCCAGCAGAGGTTCAAAAGGCTGAAGGCAAGAGGTTTGTTCATGGATATTTAATGGCTTTATTTGGGTTTATCTGATTATTGAGTGTACAAAAGACAAATCGAACATAATCTTGATTGAATTTCGAACAGGCCTGGCTTTAGAAGGCAATCTGCAAGATTCAAAATCGAGGAATCAGTGGCTGCAAAGGATGTCTTGGAGACAGAAAATTCAAATTCTACTTGTGCTTCTCAATGTATAGAAACTTCAATTCTTCCAGCAGAGGTTCAAAAGGCTGAAGGAAAGAGGTATGTTCATGTATATTTATTCGCTTTGTTTAGGCTTATGTTTACAGGGTGTGTTCAAAATGATATAGCATACATAAGACAAATAGAACATGAGCTTCATGATTTCTAACAGGCCTTGTTCGAGAAGGCAGTCTGCAAGACTCAAAACTGAGGAACCTGTTGGTACAAATGACTTATTCGAGATTGAAAATTCCAAATCTACCATTACTTCTCAATGTAAAGAGACTTCAATCCTTCAAACAGAGGTTCAGAAGGTTGAAGGCGAAAGGTCTGTTCGTGCATTGCTTTATTCGACCTTATATAGCATACAAAAGACCAACTAAAGATGAGCTTCATTGAATTTCTTAGCAGGCCATGTTCGAGAAGGCAGTCTGCAAGATTCAAACCCGAGGAACCAATGGCTACACAAGACTTACCTGAGATAGAAAATTCCACTTCTACCAGTGCTTCCCAATGCAAAGACATTGTCTGTGAACTTGTTACAACGTCAACAGTAGAAAGAAAAGATCATGGCAATTCTACTGATAAATCTGAAGTTCAAGAATGTCGGAGGTCATCTGTCGGTAGGCCATTACGGCGAGCCGTCGAAAAAGTTCAGTCATATAAGGAAATCCCACGTAATATCAAAATGCGCAGACAGGTATGATCAATCCTAACCCAATTTTTCTCTTCCTGTTATCGAGGGGAGGACAGAGTTATGATGATAGACAAGGTTGCATCACTGCTTTTGTAACTGTATCCTTTGATAGCTTTAGATTGTTCACCGACTGTTAAACCTCTAGTTTGCTTGCTTGTACTCTTAAGAAACACTTGCAACCAGAGCTCATTGCATGGATTCAACCATTCACAACACCTTTCAGACTAAAATGACCCATTAGTTATGACTTGCAACCAATCGGCTCGTTAGGAAGCTTTTTATCTGTGAAACAACACTTTTGTTTTGCCTTGCAAATTAGTTTATACTTCAACTCTTCTAATTCTTGCATGAGTTAGCAATGTTGTCTGTTTCCTTTGCCATTATCTATCTGATAAATGAATTAGTCCAAGGCTTTGTGACTGTTTTGTCACACTTGTACAGAATTTGCACATCTACATTTTCCATTTAAATACCAAACTTTCCATGTTCATGCTTGTCCTTTCTTCGTTCTAGTTCATCCAAATCTATAACATCTGGGTCGATAACATACATCTTAATTAGCTAAACTATAGGAGTCAGGGAATCCAAATCTATAACATCTGGGTCAATGACATACATCTTAACTAGCTAAACTACATTCATAGTTGATACCCGATACGATTGAATTGCAAGTGGCTCAATCATTCCCAAACTCGAAACTGATCAAGCTGCTCTTAGATTTCACTCCTGATATGCAAATTCTTAAGATGGGTCCTAGTTAGTTAAACCTTCAATGGACAAAAAGAAAAGGGTAGGAACAGAATGTACTGCATTCATTAGTGTTTTAGTCTGGTTTTAAACAGTTAAGTTCAGGAGAAAACCAGGAGAATGTGGAGTGTGGGGCCCCAAAAAAGGTTCACCTGCCCTCACATGCTAAAGAAGATAAGGAGACACTAACCCAAAAGGAAAAGGTGTCATCTTTTTCTTCAAATCCAAACCGCGTTTGATCCTCAAGTGTCAAAAGAATCAACAAAAAAAGGAATCAGGTTCTAAAAGATCAATGTTTCTGGCTGCATTTATCATTTGTATGATTTGCTTGAAGTGTGTTGGTGGCTCTCCCATTTTACTATTATTATACATTATCAGAGACTATACTATGTTATTAGGTATTCAAGATGAACAGTCAATGAATAAACAATTCATTGTATGAGGAAATGGAACTAAAAGTAGGGTAAATTTTCTGGTAAAGTTCATGTGATTATTGTTCAGAGATGATTCCAGCTCATACTTGCATTTTTATTACTAATGTTTAGTCTTCTTGTCCCTCACTATTCCGGGATTGATTTACATGACAT

mRNA sequence

CGACGTGCGTAGGGCTTGATCGGACGTTAGTGTGACCGGTAGGGATACAGTGGTGAATGTTGATGTTGTGAATGATTACATTCGAGATGTACTGAAGTGTGATGCAACCGCCGCCGGTTATGTGGACATTCGCGCCGCGGCCATCTAGGGTTTTGTAACTGTTCATCATGAGTTCGTACTTGAGTTTGATAGTCATGTCTGCAGCAAAGACGATCCAGAGAGGTTCATCTTGAACCACAGCGTAGCGGAGAGTTCCAGGGCGAGGGTTTACAGGGTCGGAATCGGAGGAATCTGTAACTATGTAGATCTGACCTCCTTTACCTCCCATGGCGTTTCGGCCAAATCCAATGCTGCAATCTGCAAGCCGTTGGCGATTGGCTTGCCAGTTCGAACCGCAGCGCCAACAATCATCGATAGGGTTTCCAGTTTGACAGGAATTCGATTGACCTTTAGAGTGAATCGACAGCATTTCCCTTCTTGAAAATGAATCATTCACACTCCTGCAAGAAACATAGATATCACGAAATTAGTGGGAAGGAAGCCATTGAAGCAGGGGACTACACCTTTGAGCAGAACAACAATGCACACAAGGTGTTTGTTAAAATGCCTAAACAAGAACAACTGCAGAACCCCATTAGAGGCATGTTCTGGACAAAGTCTGAATCAGAGGAAACTTGCTTGTTTACCTCTGAACTTCATAAACAACAGTTTCAGGATCTGGAAGAAGATGTGGGTCAGTGAGATTGAAACTGAAAGCTGCCAGAGAAGGCAGAGAGGAGCTCAAAAACCAGGTGAACAACAGAATGGCAATGGCAGCAAACATGCCTGCTTGTAGATTTTGTTGAAATGAAGAACCAGAACAAGAACAAGAACAAGAAGAACTCTATTTCAGGATGCCATGAAAAATCTTCATTTATTGAAGAGCGAGAGGAAGAAAGTGAGAAAAATTTAGTTCCATTAGATAAACGAGACCGAGATCGAGACCGAGGACAAAGATTGTAACAGATCTGTTGTTTAAGCAGAAAGATTTTAGCGTTCGACCGTAGTTTCTCGAGCATGGAGGGTATAATTTCCCACGATTCAGAGAACTACGATGTTGGAGGTGAAAACATGAAATTAACGGGAGAGAAAATTTTGAAGAGCTGCAAAGTAGGAGATGGGCAGAGAAAACAGCTTTTGGATATAAGTAACTTGAAGGAGCAACCAATAGTGCAGAAGCGAGATATGAAGCAGCAGCCGAGTTTGCTTATGAACAATGAATATGTTGATAAATTACAGAAGTCCATTAAACACGAAATAATTGAGATAAGTGGAAATGAGTTAGAGAAATTGAGAATCAATTTTCAGAAATTGCAGCAACAGAATCTGCAACTTGCCCAAGCAAACAGCCAAATGTTAGCGGAACTTAATTCGAGCAAAGACAGGCTGAAAGCGTTTCAGCATGAACTTGGTTGTAAAAATGGCGTTCTTATGGCTAGAAATCTGGATTTGGAGAGAAAAGGAAAATTAGCAACACTCCAAACTGGAGAGGTAGGGACTACCAAATGTAGTGAGGCAGAGGAATCTATGAATGCAGATAAGGATAATAAGCCTTGCAAAACTAACAGGCGACGAAAATCCAGAAGAGAATCTTTTGGCGGCGCTTCTGTTCTTCAAACAGAGGTTCAGAAGGTTGAAGGCAAGAGGCCCTGTTTTAGAAGGCAATCTGCAAAATTCAAAACAGAGGAATCAGTGAAGGATATCTTGGAGACAGAAAATTCCAGTTCTACCGATGCTTCTCAATGTATACAGACTTCAATTCTTCCAGCAGAGGTTCAAAAGGCTGAAGGCAAGAGGCCTGGCTTTAGAAGGCAATCTGCAAGATTCAAAATCGAGGAATCAGTGGCTGCAAAGGATGTCTTGGAGACAGAAAATTCAAATTCTACTTGTGCTTCTCAATGTATAGAAACTTCAATTCTTCCAGCAGAGGTTCAAAAGGCTGAAGGAAAGAGGCCTTGTTCGAGAAGGCAGTCTGCAAGACTCAAAACTGAGGAACCTGTTGGTACAAATGACTTATTCGAGATTGAAAATTCCAAATCTACCATTACTTCTCAATGTAAAGAGACTTCAATCCTTCAAACAGAGGTTCAGAAGGTTGAAGGCGAAAGGCCATGTTCGAGAAGGCAGTCTGCAAGATTCAAACCCGAGGAACCAATGGCTACACAAGACTTACCTGAGATAGAAAATTCCACTTCTACCAGTGCTTCCCAATGCAAAGACATTGTCTGTGAACTTGTTACAACGTCAACAGTAGAAAGAAAAGATCATGGCAATTCTACTGATAAATCTGAAGTTCAAGAATGTCGGAGGTCATCTGTCGGTAGGCCATTACGGCGAGCCGTCGAAAAAGTTCAGTCATATAAGGAAATCCCACGTAATATCAAAATGCGCAGACAGGTATGATCAATCCTAACCCAATTTTTCTCTTCCTGTTATCGAGGGGAGGACAGAGTTATGATGATAGACAAGGTTGCATCACTGCTTTTGTAACTGTATCCTTTGATAGCTTTAGATTGTTCACCGACTGTTAAACCTCTAGTTTGCTTGCTTGTACTCTTAAGAAACACTTGCAACCAGAGCTCATTGCATGGATTCAACCATTCACAACACCTTTCAGACTAAAATGACCCATTAGTTATGACTTGCAACCAATCGGCTCGTTAGGAAGCTTTTTATCTGTGAAACAACACTTTTGTTTTGCCTTGCAAATTAGTTTATACTTCAACTCTTCTAATTCTTGCATGAGTTAGCAATGTTGTCTGTTTCCTTTGCCATTATCTATCTGATAAATGAATTAGTCCAAGGCTTTGTGACTGTTTTGTCACACTTGTACAGAATTTGCACATCTACATTTTCCATTTAAATACCAAACTTTCCATGTTCATGCTTGTCCTTTCTTCGTTCTAGTTCATCCAAATCTATAACATCTGGGTCGATAACATACATCTTAATTAGCTAAACTATAGGAGTCAGGGAATCCAAATCTATAACATCTGGGTCAATGACATACATCTTAACTAGCTAAACTACATTCATAGTTGATACCCGATACGATTGAATTGCAAGTGGCTCAATCATTCCCAAACTCGAAACTGATCAAGCTGCTCTTAGATTTCACTCCTGATATGCAAATTCTTAAGATGGGTCCTAGTTAGTTAAACCTTCAATGGACAAAAAGAAAAGGGTAGGAACAGAATGTACTGCATTCATTAGTGTTTTAGTCTGGTTTTAAACAGTTAAGTTCAGGAGAAAACCAGGAGAATGTGGAGTGTGGGGCCCCAAAAAAGGTTCACCTGCCCTCACATGCTAAAGAAGATAAGGAGACACTAACCCAAAAGGAAAAGGTGTCATCTTTTTCTTCAAATCCAAACCGCGTTTGATCCTCAAGTGTCAAAAGAATCAACAAAAAAAGGAATCAGGTTCTAAAAGATCAATGTTTCTGGCTGCATTTATCATTTGTATGATTTGCTTGAAGTGTGTTGGTGGCTCTCCCATTTTACTATTATTATACATTATCAGAGACTATACTATGTTATTAGGTATTCAAGATGAACAGTCAATGAATAAACAATTCATTGTATGAGGAAATGGAACTAAAAGTAGGGTAAATTTTCTGGTAAAGTTCATGTGATTATTGTTCAGAGATGATTCCAGCTCATACTTGCATTTTTATTACTAATGTTTAGTCTTCTTGTCCCTCACTATTCCGGGATTGATTTACATGACAT

Coding sequence (CDS)

ATGGAGGGTATAATTTCCCACGATTCAGAGAACTACGATGTTGGAGGTGAAAACATGAAATTAACGGGAGAGAAAATTTTGAAGAGCTGCAAAGTAGGAGATGGGCAGAGAAAACAGCTTTTGGATATAAGTAACTTGAAGGAGCAACCAATAGTGCAGAAGCGAGATATGAAGCAGCAGCCGAGTTTGCTTATGAACAATGAATATGTTGATAAATTACAGAAGTCCATTAAACACGAAATAATTGAGATAAGTGGAAATGAGTTAGAGAAATTGAGAATCAATTTTCAGAAATTGCAGCAACAGAATCTGCAACTTGCCCAAGCAAACAGCCAAATGTTAGCGGAACTTAATTCGAGCAAAGACAGGCTGAAAGCGTTTCAGCATGAACTTGGTTGTAAAAATGGCGTTCTTATGGCTAGAAATCTGGATTTGGAGAGAAAAGGAAAATTAGCAACACTCCAAACTGGAGAGGTAGGGACTACCAAATGTAGTGAGGCAGAGGAATCTATGAATGCAGATAAGGATAATAAGCCTTGCAAAACTAACAGGCGACGAAAATCCAGAAGAGAATCTTTTGGCGGCGCTTCTGTTCTTCAAACAGAGGTTCAGAAGGTTGAAGGCAAGAGGCCCTGTTTTAGAAGGCAATCTGCAAAATTCAAAACAGAGGAATCAGTGAAGGATATCTTGGAGACAGAAAATTCCAGTTCTACCGATGCTTCTCAATGTATACAGACTTCAATTCTTCCAGCAGAGGTTCAAAAGGCTGAAGGCAAGAGGCCTGGCTTTAGAAGGCAATCTGCAAGATTCAAAATCGAGGAATCAGTGGCTGCAAAGGATGTCTTGGAGACAGAAAATTCAAATTCTACTTGTGCTTCTCAATGTATAGAAACTTCAATTCTTCCAGCAGAGGTTCAAAAGGCTGAAGGAAAGAGGCCTTGTTCGAGAAGGCAGTCTGCAAGACTCAAAACTGAGGAACCTGTTGGTACAAATGACTTATTCGAGATTGAAAATTCCAAATCTACCATTACTTCTCAATGTAAAGAGACTTCAATCCTTCAAACAGAGGTTCAGAAGGTTGAAGGCGAAAGGCCATGTTCGAGAAGGCAGTCTGCAAGATTCAAACCCGAGGAACCAATGGCTACACAAGACTTACCTGAGATAGAAAATTCCACTTCTACCAGTGCTTCCCAATGCAAAGACATTGTCTGTGAACTTGTTACAACGTCAACAGTAGAAAGAAAAGATCATGGCAATTCTACTGATAAATCTGAAGTTCAAGAATGTCGGAGGTCATCTGTCGGTAGGCCATTACGGCGAGCCGTCGAAAAAGTTCAGTCATATAAGGAAATCCCACGTAATATCAAAATGCGCAGACAGGTATGA

Protein sequence

MEGIISHDSENYDVGGENMKLTGEKILKSCKVGDGQRKQLLDISNLKEQPIVQKRDMKQQPSLLMNNEYVDKLQKSIKHEIIEISGNELEKLRINFQKLQQQNLQLAQANSQMLAELNSSKDRLKAFQHELGCKNGVLMARNLDLERKGKLATLQTGEVGTTKCSEAEESMNADKDNKPCKTNRRRKSRRESFGGASVLQTEVQKVEGKRPCFRRQSAKFKTEESVKDILETENSSSTDASQCIQTSILPAEVQKAEGKRPGFRRQSARFKIEESVAAKDVLETENSNSTCASQCIETSILPAEVQKAEGKRPCSRRQSARLKTEEPVGTNDLFEIENSKSTITSQCKETSILQTEVQKVEGERPCSRRQSARFKPEEPMATQDLPEIENSTSTSASQCKDIVCELVTTSTVERKDHGNSTDKSEVQECRRSSVGRPLRRAVEKVQSYKEIPRNIKMRRQV

Homology

[Close]

BLAST of Cp4.1LG01g24620 vs. ExPASy Swiss-Prot
Match: Q0WTB8 (SHUGOSHIN 2 OS=Arabidopsis thaliana OX=3702 GN=SGO2 PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 3.3e-27
Identity = 132/457 (28.88%), Postives = 216/457 (47.26%), Query Frame = 0


Query: 52  VQKRDMKQQPSLLMNN-EYVDKLQK---------SIKHEIIEISGNELEKLRINFQKLQQ 111
           + K + +Q+ ++L ++ EY  KLQK         + +++++E+SG E++KLRIN + +Q+
Sbjct: 25  MDKEETQQKENMLFSSQEYAAKLQKENMTLMKALAHRNKLVELSGIEIQKLRINLRSVQE 84

Query: 112 QNLQLAQANSQMLAELNSSKDRLKAFQHELGCKNGVLMARNLDLERKGKLATLQTGEVGT 171
           +NLQLAQANSQMLAELN+++DRLK  QHELGCKN +L  +    E+       ++ +  +
Sbjct: 85  KNLQLAQANSQMLAELNTNRDRLKDLQHELGCKNALLKVKKHLEEQVLPRTHHESKDKVS 144

Query: 172 TKCSEAEESMNADKDNKPCKTNRRRKSRRESFGGASVLQTEVQKVEGKRPCFRRQSAKFK 231
              S+ +       D K   T R+R +R +S   A V    V     K    RR S    
Sbjct: 145 ASASDGDCKSFQVHDIKHKDTKRKRTTRIKSSVSADVKPIPVNDSNSKANRKRRVSGVID 204

Query: 232 TEESVKDILETEN---------SSSTDASQCIQTSILPAEV----QKAEGKRPGFRRQSA 291
           T    ++I +TE+           + D    +    +P       +    KR   RRQS 
Sbjct: 205 TTGIPEEICQTEDDIDKGVVSRGVNQDIDNVVNKKFVPDAANPVKESVHRKRQCTRRQST 264

Query: 292 RFKIEESVAAKDVLETENSNSTCASQCIETSILPA-----------------EVQKAEGK 351
           RF ++E+   + +LE + +  +  +         A                 EV++   +
Sbjct: 265 RFDVQETKQTEKLLEMDGAKESKETASFSLRRRSARLRHEEAEPCKSLHEGDEVRETIKR 324

Query: 352 RPCSRRQSARLKTEEPVGTNDLFEIENSKSTI-------TSQCKETSILQTEVQKVEGER 411
           R  S R SAR   +EP  T +    ++++S +        S+  E S  + E +++  +R
Sbjct: 325 RRVSLRLSARFDIQEPHVT-ETSNADDARSIVIEESAGSRSESVEPSESRHETKEITRKR 384

Query: 412 PCS-RRQSARFKPEEPMATQDLPEIENSTSTSASQCKDIVCELVTTSTVERKDHGNSTDK 461
             S RRQS + K +   A +++    +  +T   +C             E KD   + + 
Sbjct: 385 SFSTRRQSTKGKSQTDEAIKEIATDPSLVNTIVQEC---------DQETESKDKPKADEN 444

[Close]

BLAST of Cp4.1LG01g24620 vs. ExPASy Swiss-Prot
Match: F4J3S1 (SHUGOSHIN 1 OS=Arabidopsis thaliana OX=3702 GN=SGO1 PE=3 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 6.5e-23
Identity = 160/562 (28.47%), Postives = 240/562 (42.70%), Query Frame = 0


Query: 15  GGENMKLTGEKILKSCKVGDGQRKQLLDISNLKEQPIVQKRDMK--QQPSLLMNNEYVDK 74
           G    K  GEK++    +   QR++L DI+NL+ Q  +  +  K  QQ  L+ + E  + 
Sbjct: 16  GVRTNKAKGEKMVLEPPMNSAQRRKLGDITNLQNQKNLMNQGAKHQQQAILISSKENAEN 75

Query: 75  LQK---SIKHEIIEISG--NELEKLRINFQKLQQQNLQLAQANSQMLAELNSSKDRLKAF 134
           LQK    +   ++E  G  ++L+KLRI FQK+Q+QNL LAQAN+++LAE N+SKD+LK  
Sbjct: 76  LQKENTKLMKVVMERDGIKSDLKKLRIEFQKVQEQNLLLAQANTRILAEFNTSKDQLKVL 135

Query: 135 QHELGCKNGVLMARNLDLERKGKLATLQTGEV--------GTTKC--------SEAEESM 194
           QHELGCKNG++MAR + L+ +    T    +V        G  K           A  S 
Sbjct: 136 QHELGCKNGLVMARKMLLKEQTLPCTRHASKVKAQANACGGACKTFQPNDADHEHASGSS 195

Query: 195 NADKDNKPCKTN-RRRKSRRESFGGASVL----------QTE------------------ 254
           NA+   +  K N +RR S R++   + VL          Q E                  
Sbjct: 196 NANSLQRNEKANSKRRVSGRKNPANSEVLDIIGRSGETCQMEDNIDNKKLVSDSDNDAEN 255

Query: 255 --VQKVEGKRPCFRRQSAKFKTEES-----------VKDILETENSSSTDASQCIQTSIL 314
                V+ KR C  RQS+  KT E+            K+I      S T  S  +++   
Sbjct: 256 HINDNVQSKRYCAGRQSSSSKTREASQTETLQKVVDAKEIKGDARFSLTKHSDWLKSQEP 315

Query: 315 PAEVQKAEGKRPGFRRQSARFKIEE---SVAAKDVLET---------------------E 374
                  E + P  RR+SAR K +E   S +  D +ET                     +
Sbjct: 316 EPSESLYESRFP-LRRRSARLKSQEPEPSESFHDSIETTKRRRSAIRSAMFNIQELGVIQ 375

Query: 375 NSN-----------STCASQCIETSILPAEVQKAEGK------RPCSRRQSARLKTEEPV 434
           N N           + C+++   T   P  V+  + K      R   RRQSAR   +E +
Sbjct: 376 NLNGLPDDQEIAAKARCSAREQSTGSKPEAVEPHDTKEIIGKSRISLRRQSARFNFQE-L 435

Query: 435 GTNDLFEIENSKSTITSQCKETSILQTEVQKVEGERP------------CSRRQSARFKP 459
           G  +     +   TI +  +  +  Q+   K E   P             SRRQSA  + 
Sbjct: 436 GVTENLNGPHDDQTIAANARCCASEQSIGSKPEAVEPHDIEERIGKIRVSSRRQSANIET 495

[Close]

BLAST of Cp4.1LG01g24620 vs. ExPASy Swiss-Prot
Match: E3VXF2 (Shugoshin-1 OS=Oryza sativa subsp. japonica OX=39947 GN=SGO1 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 6.1e-21
Identity = 127/434 (29.26%), Postives = 193/434 (44.47%), Query Frame = 0


Query: 78  KHEIIEISGNELEKLRINFQKLQQQNLQLAQANSQMLAELNSSKDRLKAFQHELGCKNGV 137
           ++++IE+S  EL+K+R+  Q +QQ+NLQL QANSQM AE+N  KDR+K  QHEL C   V
Sbjct: 67  RNKVIEVSRVELQKIRLALQAMQQKNLQLVQANSQMFAEINQGKDRIKLLQHELACTIAV 126

Query: 138 LMARNLDLERKGKLATLQTG-------EVGTTKCSEAEESMNA----------------- 197
           L  +  +LE+  K +  Q         +  ++KC+  +    A                 
Sbjct: 127 LKVKGSELEKMSKTSNNQQNRAKILEKKTRSSKCAPTKAHQMAAGSIREHLVEIQSAVPS 186

Query: 198 ---------DKDNKPCKTNRRRKSRRESFGGASVLQTEVQ---------KVEGKRPCFRR 257
                    DK NK C TNRR+    E     + +Q   +           +  R   RR
Sbjct: 187 YTSCHEPPQDKTNKRC-TNRRKSESCEVTMDTNTVQHSCRPHVEYNGSSHDDDPRKTRRR 246

Query: 258 QSAK-----FKTEESVKDILETENSSSTDASQCIQTSILPA-EVQKAEGKRPGFRRQSAR 317
           +SA+     F+  E    + E     S  +S   +     A +     GK    +++   
Sbjct: 247 RSARLNPGSFEVAEICDKLHEDATVPSAPSSNVPKLQEPNAGKDMICGGKMKSLQKELPC 306

Query: 318 FKIEESVAAKDVLETENSNSTCASQCIETSILPAEVQKAEGKRPCSRRQSARL-KTEEPV 377
             I + V A ++ E + + S         S+   E  K + + P   R+S R+   +  +
Sbjct: 307 DAIAQVVEAPELKEIQEAGS---------SVAGGEAHKFDIEDPEPPRKSMRIDANKRKL 366

Query: 378 GTNDLFEIENSKSTITSQCKETSILQTEVQKVEGERPCSRRQSARFKPEEPMATQDLPEI 437
            + +     N +  I + C  TS +  +    E +R  SRR+S+R  P     T    EI
Sbjct: 367 ESFESRLASNKEDCINAICDSTSSVPIQ---HEQKRKLSRRKSSRLDPGPWEVTNGTFEI 426

Query: 438 --ENSTSTSASQCKDIVCELVTTSTVERKDHGNSTDKSEVQEC-RRSSVGRPLRRAVEKV 460
             E++ + SA    + + E   T    + D   ST  S+ Q   RRSSVGRP RRA EK+
Sbjct: 427 VQEDTVAPSAPSSSNALIE--QTKNDMQNDRSCSTKPSDEQVIGRRSSVGRPSRRAAEKI 485

[Close]

BLAST of Cp4.1LG01g24620 vs. ExPASy Swiss-Prot
Match: Q4QSC8 (Shugoshin-1 OS=Zea mays OX=4577 GN=SGO1 PE=2 SV=2)

HSP 1 Score: 84.7 bits (208), Expect = 2.9e-15
Identity = 108/408 (26.47%), Postives = 173/408 (42.40%), Query Frame = 0


Query: 78  KHEIIEISGNELEKLRINFQKLQQQNLQLAQANSQMLAELNSSKDRLKAFQHELGCKNGV 137
           K +II++S  E+ KLR+  Q  +QQNL L Q NSQMLAE+N+ KDR+K  QHEL C   +
Sbjct: 76  KTKIIDLSRVEIYKLRLALQASKQQNLHLTQTNSQMLAEINTGKDRIKMLQHELSCTTAL 135

Query: 138 LMARNLDLERKGKLATLQ----TGEVGTTKCSEAEESMNADKDNKPCKTNRRRKSRRESF 197
           L  ++ +L+RK     +Q      +V  TK S      +   D+            + + 
Sbjct: 136 LKVKDSELDRKKNAGNVQQKGVKSQVLKTKASTVAVEAHHVGDSVTSGVEHHVVESQSAV 195

Query: 198 GGASVLQTEVQKVEGKRPCFRRQSAKFKTEE-SVKDILETENSSSTDASQCIQTSILPAE 257
              +V Q   Q  + KR   RR+S++       ++ + +     +        T  L  +
Sbjct: 196 SSNTVCQEPPQDGKQKRMPQRRRSSRLNQGSCEIRGVSQNTLHENPVVPVAPSTLSLEKQ 255

Query: 258 VQKAEGKRPGFRRQSARFKIEESVAAKDVLETENS---NSTCASQCIETSILPAEVQKAE 317
             +  GK     +      + E + A +  +TE +     T   +  E      EVQ  +
Sbjct: 256 YGQTTGKHMKSLQNECSATVHEVIMASEFEKTEINELPQKTDLKEIPEACSSETEVQSHK 315

Query: 318 -GKRPCSRRQS-----------ARLKTEEPVGTNDLFEIENSKSTITSQCKETSILQTEV 377
            G +  + +Q+             + T EP   N +      +S+I     +   + +E 
Sbjct: 316 IGDKAFNSKQNHLTGSQSSLSFNTVDTPEPPEDNTVKRCSKKRSSIEDVNAKLDTITSEP 375

Query: 378 QKVEGERPCSRRQSARFKPEEPMATQDLPEIENSTSTSASQCKDIVCELV-TTSTVERKD 437
            + E +R   R+ SAR        T  + E E+         KD++  L  +TS V  + 
Sbjct: 376 LRHEEKRKSRRKISARLNSVSSEHTDIVVETEH---------KDVIVSLAGSTSNVSMEQ 435

Query: 438 HGNSTDKSEVQECRRSSVG-----RPLRRAVEKVQSYKEIPRNIKMRR 460
             N     +    R+S+       R LRRA EKV SYKE+P N+KMRR
Sbjct: 436 RTNQEQDGDCFS-RKSNENQILGRRSLRRAAEKVVSYKEMPLNVKMRR 473

[Close]

BLAST of Cp4.1LG01g24620 vs. NCBI nr
Match: XP_023524534.1 (SHUGOSHIN 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 851 bits (2199), Expect = 3.61e-310
Identity = 457/470 (97.23%), Postives = 460/470 (97.87%), Query Frame = 0


Query: 1   MEGIISHDSENYDVGGENMKLTGEKILKSCKVGDGQRKQLLDISNLKEQPIVQKRDMKQQ 60
           MEGIISHDSENYDVGGENMKLTGEKILKSCKVGDGQRKQLLDISNLKEQPIVQKRDMKQQ
Sbjct: 1   MEGIISHDSENYDVGGENMKLTGEKILKSCKVGDGQRKQLLDISNLKEQPIVQKRDMKQQ 60

Query: 61  PSLLMNNEYVDKLQK---------SIKHEIIEISGNELEKLRINFQKLQQQNLQLAQANS 120
           PSLLMNNEYVDKLQK         + ++EIIEISGNELEKLRINFQKLQQQNLQLAQANS
Sbjct: 61  PSLLMNNEYVDKLQKENMALMRVLAERNEIIEISGNELEKLRINFQKLQQQNLQLAQANS 120

Query: 121 QMLAELNSSKDRLKAFQHELGCKNGVLMARNLDLERKGKLATLQTGEVGTTKCSEAEESM 180
           QMLAELNSSKDRLKAFQHELGCKNGVLMARNLDLERKGKLATLQTGEVGTTKCSEAEESM
Sbjct: 121 QMLAELNSSKDRLKAFQHELGCKNGVLMARNLDLERKGKLATLQTGEVGTTKCSEAEESM 180

Query: 181 NADKDNKPCKTNRRRKSRRESFGGASVLQTEVQKVEGKRPCFRRQSAKFKTEESVKDILE 240
           NADKDNKPCKTNRRRKSRRESFGGASVLQTEVQKVEGKRPCFRRQSAKFKTEESVKDILE
Sbjct: 181 NADKDNKPCKTNRRRKSRRESFGGASVLQTEVQKVEGKRPCFRRQSAKFKTEESVKDILE 240

Query: 241 TENSSSTDASQCIQTSILPAEVQKAEGKRPGFRRQSARFKIEESVAAKDVLETENSNSTC 300
           TENSSSTDASQCIQTSILPAEVQKAEGKRPGFRRQSARFKIEESVAAKDVLETENSNSTC
Sbjct: 241 TENSSSTDASQCIQTSILPAEVQKAEGKRPGFRRQSARFKIEESVAAKDVLETENSNSTC 300

Query: 301 ASQCIETSILPAEVQKAEGKRPCSRRQSARLKTEEPVGTNDLFEIENSKSTITSQCKETS 360
           ASQCIETSILPAEVQKAEGKRPCSRRQSARLKTEEPVGTNDLFEIENSKSTITSQCKETS
Sbjct: 301 ASQCIETSILPAEVQKAEGKRPCSRRQSARLKTEEPVGTNDLFEIENSKSTITSQCKETS 360

Query: 361 ILQTEVQKVEGERPCSRRQSARFKPEEPMATQDLPEIENSTSTSASQCKDIVCELVTTST 420
           ILQTEVQKVEGERPCSRRQSARFKPEEPMATQDLPEIENSTSTSASQCKDIVCELVTTST
Sbjct: 361 ILQTEVQKVEGERPCSRRQSARFKPEEPMATQDLPEIENSTSTSASQCKDIVCELVTTST 420

Query: 421 VERKDHGNSTDKSEVQECRRSSVGRPLRRAVEKVQSYKEIPRNIKMRRQV 461
           VERKDHGNSTDKSEVQECRRSSVGRPLRRAVEKVQSYKEIPRNIKMRRQV
Sbjct: 421 VERKDHGNSTDKSEVQECRRSSVGRPLRRAVEKVQSYKEIPRNIKMRRQV 470

[Close]

BLAST of Cp4.1LG01g24620 vs. NCBI nr
Match: XP_022953514.1 (SHUGOSHIN 2-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 825 bits (2130), Expect = 1.13e-299
Identity = 445/470 (94.68%), Postives = 451/470 (95.96%), Query Frame = 0


Query: 1   MEGIISHDSENYDVGGENMKLTGEKILKSCKVGDGQRKQLLDISNLKEQPIVQKRDMKQQ 60
           MEGIISHDSENYDVGG+NMKLTGEKI+KSCKVGDGQRKQL DISNLKEQPIVQKRDMKQQ
Sbjct: 1   MEGIISHDSENYDVGGQNMKLTGEKIMKSCKVGDGQRKQLSDISNLKEQPIVQKRDMKQQ 60

Query: 61  PSLLMNNEYVDKLQK---------SIKHEIIEISGNELEKLRINFQKLQQQNLQLAQANS 120
           PSLLMNNEYVDKLQK         + ++ IIEISGNELEKLRINFQKLQQQNLQLAQANS
Sbjct: 61  PSLLMNNEYVDKLQKENMALMRVLAERNRIIEISGNELEKLRINFQKLQQQNLQLAQANS 120

Query: 121 QMLAELNSSKDRLKAFQHELGCKNGVLMARNLDLERKGKLATLQTGEVGTTKCSEAEESM 180
           QMLAELNSSKDRLKAFQHELGCKNGVLMARNLDLERKGKLATLQTGEVGTTKCSEAEESM
Sbjct: 121 QMLAELNSSKDRLKAFQHELGCKNGVLMARNLDLERKGKLATLQTGEVGTTKCSEAEESM 180

Query: 181 NADKDNKPCKTNRRRKSRRESFGGASVLQTEVQKVEGKRPCFRRQSAKFKTEESVKDILE 240
           NADKDNKPCKTNRRRKSRRESFG ASVLQTEVQKVEGKRPCFRRQSAKFKTEESVKDILE
Sbjct: 181 NADKDNKPCKTNRRRKSRRESFG-ASVLQTEVQKVEGKRPCFRRQSAKFKTEESVKDILE 240

Query: 241 TENSSSTDASQCIQTSILPAEVQKAEGKRPGFRRQSARFKIEESVAAKDVLETENSNSTC 300
           TENSSSTDASQCIQT ILPAE QKAEGKRPGFRRQSARFK EESVAAKD+LETENSNSTC
Sbjct: 241 TENSSSTDASQCIQTPILPAEDQKAEGKRPGFRRQSARFKTEESVAAKDILETENSNSTC 300

Query: 301 ASQCIETSILPAEVQKAEGKRPCSRRQSARLKTEEPVGTNDLFEIENSKSTITSQCKETS 360
           ASQCIETSILPAEVQKAEGKRPCSRRQSARLKTEEPVGTNDLFEIENSKST TSQCKETS
Sbjct: 301 ASQCIETSILPAEVQKAEGKRPCSRRQSARLKTEEPVGTNDLFEIENSKSTNTSQCKETS 360

Query: 361 ILQTEVQKVEGERPCSRRQSARFKPEEPMATQDLPEIENSTSTSASQCKDIVCELVTTST 420
           ILQTEVQKVEGERPCSRRQSARFKPEEPM TQDLPEIENSTSTSASQCKD VCELVTTST
Sbjct: 361 ILQTEVQKVEGERPCSRRQSARFKPEEPMPTQDLPEIENSTSTSASQCKDTVCELVTTST 420

Query: 421 VERKDHGNSTDKSEVQECRRSSVGRPLRRAVEKVQSYKEIPRNIKMRRQV 461
           VERKDHGNSTDKSEVQECRRSSVGRPLRRAVEKVQSYKEIPRNIKMRRQV
Sbjct: 421 VERKDHGNSTDKSEVQECRRSSVGRPLRRAVEKVQSYKEIPRNIKMRRQV 469

[Close]

BLAST of Cp4.1LG01g24620 vs. NCBI nr
Match: XP_022953497.1 (SHUGOSHIN 2-like isoform X1 [Cucurbita moschata] >XP_022953506.1 SHUGOSHIN 2-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 820 bits (2118), Expect = 7.90e-298
Identity = 445/471 (94.48%), Postives = 451/471 (95.75%), Query Frame = 0


Query: 1   MEGIISHDSENYDVGGENMKLTGEKILKSCKVGDGQRKQLLDISNLKEQPIVQKRDMKQQ 60
           MEGIISHDSENYDVGG+NMKLTGEKI+KSCKVGDGQRKQL DISNLKEQPIVQKRDMKQQ
Sbjct: 1   MEGIISHDSENYDVGGQNMKLTGEKIMKSCKVGDGQRKQLSDISNLKEQPIVQKRDMKQQ 60

Query: 61  PSLLMNNEYVDKLQK---------SIKHEIIEISGNELEKLRINFQKLQQQNLQLAQANS 120
           PSLLMNNEYVDKLQK         + ++ IIEISGNELEKLRINFQKLQQQNLQLAQANS
Sbjct: 61  PSLLMNNEYVDKLQKENMALMRVLAERNRIIEISGNELEKLRINFQKLQQQNLQLAQANS 120

Query: 121 QMLAELNSSKDRLKAFQHELGCKNGVLMARNLDLERKGKLATLQTGEVGTTKCSEAEESM 180
           QMLAELNSSKDRLKAFQHELGCKNGVLMARNLDLERKGKLATLQTGEVGTTKCSEAEESM
Sbjct: 121 QMLAELNSSKDRLKAFQHELGCKNGVLMARNLDLERKGKLATLQTGEVGTTKCSEAEESM 180

Query: 181 NADKDNKPCKTNRRRKSRRESFGGASVLQTEVQKVEGKRPCFRRQSAKFKTEESVKDILE 240
           NADKDNKPCKTNRRRKSRRESFG ASVLQTEVQKVEGKRPCFRRQSAKFKTEESVKDILE
Sbjct: 181 NADKDNKPCKTNRRRKSRRESFG-ASVLQTEVQKVEGKRPCFRRQSAKFKTEESVKDILE 240

Query: 241 TENSSSTDASQCIQTSILPAEVQKAEGKRPGFRRQSARFKIEESVAAKDVLETENSNSTC 300
           TENSSSTDASQCIQT ILPAE QKAEGKRPGFRRQSARFK EESVAAKD+LETENSNSTC
Sbjct: 241 TENSSSTDASQCIQTPILPAEDQKAEGKRPGFRRQSARFKTEESVAAKDILETENSNSTC 300

Query: 301 ASQCIETSILPAEVQKAEGKRPCSRRQSARLKTEEPVGTNDLFEIENSKSTITSQCKETS 360
           ASQCIETSILPAEVQKAEGKRPCSRRQSARLKTEEPVGTNDLFEIENSKST TSQCKETS
Sbjct: 301 ASQCIETSILPAEVQKAEGKRPCSRRQSARLKTEEPVGTNDLFEIENSKSTNTSQCKETS 360

Query: 361 ILQTEVQKVEGE-RPCSRRQSARFKPEEPMATQDLPEIENSTSTSASQCKDIVCELVTTS 420
           ILQTEVQKVEGE RPCSRRQSARFKPEEPM TQDLPEIENSTSTSASQCKD VCELVTTS
Sbjct: 361 ILQTEVQKVEGESRPCSRRQSARFKPEEPMPTQDLPEIENSTSTSASQCKDTVCELVTTS 420

Query: 421 TVERKDHGNSTDKSEVQECRRSSVGRPLRRAVEKVQSYKEIPRNIKMRRQV 461
           TVERKDHGNSTDKSEVQECRRSSVGRPLRRAVEKVQSYKEIPRNIKMRRQV
Sbjct: 421 TVERKDHGNSTDKSEVQECRRSSVGRPLRRAVEKVQSYKEIPRNIKMRRQV 470

[Close]

BLAST of Cp4.1LG01g24620 vs. NCBI nr
Match: KAG6602286.1 (SHUGOSHIN 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 819 bits (2116), Expect = 7.70e-297
Identity = 443/469 (94.46%), Postives = 449/469 (95.74%), Query Frame = 0


Query: 1   MEGIISHDSENYDVGGENMKLTGEKILKSCKVGDGQRKQLLDISNLKEQPIVQKRDMKQQ 60
           MEGIISHDSENYDVGG+NMKLTGEKI+KSCKVGDGQRKQL DISNLKEQPIVQKRDMKQQ
Sbjct: 1   MEGIISHDSENYDVGGQNMKLTGEKIMKSCKVGDGQRKQLSDISNLKEQPIVQKRDMKQQ 60

Query: 61  PSLLMNNEYVDKLQK---------SIKHEIIEISGNELEKLRINFQKLQQQNLQLAQANS 120
           PSLLMNNEYVDKLQK         + ++ IIEISGNELEKLRINFQKLQQQNLQLAQANS
Sbjct: 61  PSLLMNNEYVDKLQKENMALMRVLAERNRIIEISGNELEKLRINFQKLQQQNLQLAQANS 120

Query: 121 QMLAELNSSKDRLKAFQHELGCKNGVLMARNLDLERKGKLATLQTGEVGTTKCSEAEESM 180
           QMLAELNSSKDRLKAFQHELGCKNGVLMARNLDLERKGKLATLQTGEVGTTKCSEAEESM
Sbjct: 121 QMLAELNSSKDRLKAFQHELGCKNGVLMARNLDLERKGKLATLQTGEVGTTKCSEAEESM 180

Query: 181 NADKDNKPCKTNRRRKSRRESFGGASVLQTEVQKVEGKRPCFRRQSAKFKTEESVKDILE 240
           NADKDNKPCKTNRRRKSRRESFG ASVLQTEVQKVEGKRPCFRRQSAKFKTEESVKDILE
Sbjct: 181 NADKDNKPCKTNRRRKSRRESFG-ASVLQTEVQKVEGKRPCFRRQSAKFKTEESVKDILE 240

Query: 241 TENSSSTDASQCIQTSILPAEVQKAEGKRPGFRRQSARFKIEESVAAKDVLETENSNSTC 300
           TENSSSTDASQCIQTSILPAE QK EGKRPGFRRQSARFK EESVAAKD+LETENSNSTC
Sbjct: 241 TENSSSTDASQCIQTSILPAEDQKVEGKRPGFRRQSARFKTEESVAAKDILETENSNSTC 300

Query: 301 ASQCIETSILPAEVQKAEGKRPCSRRQSARLKTEEPVGTNDLFEIENSKSTITSQCKETS 360
           ASQCIETSILPAEVQKAEGKRPCSRRQSARLKTEEPVGTNDLFEIENSKST TSQCKETS
Sbjct: 301 ASQCIETSILPAEVQKAEGKRPCSRRQSARLKTEEPVGTNDLFEIENSKSTNTSQCKETS 360

Query: 361 ILQTEVQKVEGERPCSRRQSARFKPEEPMATQDLPEIENSTSTSASQCKDIVCELVTTST 420
           ILQTEVQKVEGERPCSRRQSARFKPEEPM TQDLPEIENSTSTSASQCKD V ELVTTST
Sbjct: 361 ILQTEVQKVEGERPCSRRQSARFKPEEPMPTQDLPEIENSTSTSASQCKDTVFELVTTST 420

Query: 421 VERKDHGNSTDKSEVQECRRSSVGRPLRRAVEKVQSYKEIPRNIKMRRQ 460
           VERKDHGNSTDKSEVQECRRSSVGRPLRRAVEKVQSYKEIPRNIKMRRQ
Sbjct: 421 VERKDHGNSTDKSEVQECRRSSVGRPLRRAVEKVQSYKEIPRNIKMRRQ 468

[Close]

BLAST of Cp4.1LG01g24620 vs. NCBI nr
Match: XP_022990344.1 (SHUGOSHIN 2-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 816 bits (2107), Expect = 3.89e-296
Identity = 442/472 (93.64%), Postives = 451/472 (95.55%), Query Frame = 0


Query: 1   MEGIISHDSENYDVGGENMKLTGEKILKSCKVGDGQRKQLLDISNLKEQPIVQKRDMKQQ 60
           MEGIISHDSENYDVGG+NMKLTGEKI+KSCKVGDGQRKQL DISNLKEQPIVQKRDMKQQ
Sbjct: 1   MEGIISHDSENYDVGGQNMKLTGEKIMKSCKVGDGQRKQLSDISNLKEQPIVQKRDMKQQ 60

Query: 61  PSLLMNNEYVDKLQK---------SIKHEIIEISGNELEKLRINFQKLQQQNLQLAQANS 120
           PSLLMNNEYVDKLQK         + ++ IIEISGNELEKLRINFQKLQQQNLQLAQANS
Sbjct: 61  PSLLMNNEYVDKLQKENMALMRVLAERNRIIEISGNELEKLRINFQKLQQQNLQLAQANS 120

Query: 121 QMLAELNSSKDRLKAFQHELGCKNGVLMARNLDLERKGKLATLQTGEVGTTKCSEAEESM 180
           QMLAELNSSKDRLKAFQHELGCKNGVLMARNLDLERKGKLATLQTGEVGTTKCSEAEESM
Sbjct: 121 QMLAELNSSKDRLKAFQHELGCKNGVLMARNLDLERKGKLATLQTGEVGTTKCSEAEESM 180

Query: 181 NADKDNKPCKTNRRRKSRRESFGGASVLQTEVQKVEGKRPCFRRQSAKFKTEESV--KDI 240
           NADKDNKPCKTNRRRKSRRESFG ASVLQTEVQKVEGKRPCFRRQSAKFKTEESV  KDI
Sbjct: 181 NADKDNKPCKTNRRRKSRRESFG-ASVLQTEVQKVEGKRPCFRRQSAKFKTEESVAAKDI 240

Query: 241 LETENSSSTDASQCIQTSILPAEVQKAEGKRPGFRRQSARFKIEESVAAKDVLETENSNS 300
           LET+NSSSTDASQCI+TSILPAEVQKAEGKRP FRRQS RFK EESVAAKD+LETENSNS
Sbjct: 241 LETKNSSSTDASQCIETSILPAEVQKAEGKRPCFRRQSTRFKTEESVAAKDILETENSNS 300

Query: 301 TCASQCIETSILPAEVQKAEGKRPCSRRQSARLKTEEPVGTNDLFEIENSKSTITSQCKE 360
           TCASQCIETSILP EVQKAEGKRPCSRRQS RLKTEEPVGTNDLF+IENSKST TSQCKE
Sbjct: 301 TCASQCIETSILPVEVQKAEGKRPCSRRQSERLKTEEPVGTNDLFDIENSKSTNTSQCKE 360

Query: 361 TSILQTEVQKVEGERPCSRRQSARFKPEEPMATQDLPEIENSTSTSASQCKDIVCELVTT 420
           TSILQTEVQKVEGERPCSRRQSARFKPEEPMATQDLPEIENSTSTSASQCKDIVCELVTT
Sbjct: 361 TSILQTEVQKVEGERPCSRRQSARFKPEEPMATQDLPEIENSTSTSASQCKDIVCELVTT 420

Query: 421 STVERKDHGNSTDKSEVQECRRSSVGRPLRRAVEKVQSYKEIPRNIKMRRQV 461
           STVERKDHGNSTDKSEVQECRRSSVGRPLRRAVEKVQSYKEIPRNIKMRRQV
Sbjct: 421 STVERKDHGNSTDKSEVQECRRSSVGRPLRRAVEKVQSYKEIPRNIKMRRQV 471

[Close]

BLAST of Cp4.1LG01g24620 vs. ExPASy TrEMBL
Match: A0A6J1GPX4 (SHUGOSHIN 2-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456026 PE=3 SV=1)

HSP 1 Score: 825 bits (2130), Expect = 5.47e-300
Identity = 445/470 (94.68%), Postives = 451/470 (95.96%), Query Frame = 0


Query: 1   MEGIISHDSENYDVGGENMKLTGEKILKSCKVGDGQRKQLLDISNLKEQPIVQKRDMKQQ 60
           MEGIISHDSENYDVGG+NMKLTGEKI+KSCKVGDGQRKQL DISNLKEQPIVQKRDMKQQ
Sbjct: 1   MEGIISHDSENYDVGGQNMKLTGEKIMKSCKVGDGQRKQLSDISNLKEQPIVQKRDMKQQ 60

Query: 61  PSLLMNNEYVDKLQK---------SIKHEIIEISGNELEKLRINFQKLQQQNLQLAQANS 120
           PSLLMNNEYVDKLQK         + ++ IIEISGNELEKLRINFQKLQQQNLQLAQANS
Sbjct: 61  PSLLMNNEYVDKLQKENMALMRVLAERNRIIEISGNELEKLRINFQKLQQQNLQLAQANS 120

Query: 121 QMLAELNSSKDRLKAFQHELGCKNGVLMARNLDLERKGKLATLQTGEVGTTKCSEAEESM 180
           QMLAELNSSKDRLKAFQHELGCKNGVLMARNLDLERKGKLATLQTGEVGTTKCSEAEESM
Sbjct: 121 QMLAELNSSKDRLKAFQHELGCKNGVLMARNLDLERKGKLATLQTGEVGTTKCSEAEESM 180

Query: 181 NADKDNKPCKTNRRRKSRRESFGGASVLQTEVQKVEGKRPCFRRQSAKFKTEESVKDILE 240
           NADKDNKPCKTNRRRKSRRESFG ASVLQTEVQKVEGKRPCFRRQSAKFKTEESVKDILE
Sbjct: 181 NADKDNKPCKTNRRRKSRRESFG-ASVLQTEVQKVEGKRPCFRRQSAKFKTEESVKDILE 240

Query: 241 TENSSSTDASQCIQTSILPAEVQKAEGKRPGFRRQSARFKIEESVAAKDVLETENSNSTC 300
           TENSSSTDASQCIQT ILPAE QKAEGKRPGFRRQSARFK EESVAAKD+LETENSNSTC
Sbjct: 241 TENSSSTDASQCIQTPILPAEDQKAEGKRPGFRRQSARFKTEESVAAKDILETENSNSTC 300

Query: 301 ASQCIETSILPAEVQKAEGKRPCSRRQSARLKTEEPVGTNDLFEIENSKSTITSQCKETS 360
           ASQCIETSILPAEVQKAEGKRPCSRRQSARLKTEEPVGTNDLFEIENSKST TSQCKETS
Sbjct: 301 ASQCIETSILPAEVQKAEGKRPCSRRQSARLKTEEPVGTNDLFEIENSKSTNTSQCKETS 360

Query: 361 ILQTEVQKVEGERPCSRRQSARFKPEEPMATQDLPEIENSTSTSASQCKDIVCELVTTST 420
           ILQTEVQKVEGERPCSRRQSARFKPEEPM TQDLPEIENSTSTSASQCKD VCELVTTST
Sbjct: 361 ILQTEVQKVEGERPCSRRQSARFKPEEPMPTQDLPEIENSTSTSASQCKDTVCELVTTST 420

Query: 421 VERKDHGNSTDKSEVQECRRSSVGRPLRRAVEKVQSYKEIPRNIKMRRQV 461
           VERKDHGNSTDKSEVQECRRSSVGRPLRRAVEKVQSYKEIPRNIKMRRQV
Sbjct: 421 VERKDHGNSTDKSEVQECRRSSVGRPLRRAVEKVQSYKEIPRNIKMRRQV 469

[Close]

BLAST of Cp4.1LG01g24620 vs. ExPASy TrEMBL
Match: A0A6J1GNE0 (SHUGOSHIN 2-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456026 PE=3 SV=1)

HSP 1 Score: 820 bits (2118), Expect = 3.82e-298
Identity = 445/471 (94.48%), Postives = 451/471 (95.75%), Query Frame = 0


Query: 1   MEGIISHDSENYDVGGENMKLTGEKILKSCKVGDGQRKQLLDISNLKEQPIVQKRDMKQQ 60
           MEGIISHDSENYDVGG+NMKLTGEKI+KSCKVGDGQRKQL DISNLKEQPIVQKRDMKQQ
Sbjct: 1   MEGIISHDSENYDVGGQNMKLTGEKIMKSCKVGDGQRKQLSDISNLKEQPIVQKRDMKQQ 60

Query: 61  PSLLMNNEYVDKLQK---------SIKHEIIEISGNELEKLRINFQKLQQQNLQLAQANS 120
           PSLLMNNEYVDKLQK         + ++ IIEISGNELEKLRINFQKLQQQNLQLAQANS
Sbjct: 61  PSLLMNNEYVDKLQKENMALMRVLAERNRIIEISGNELEKLRINFQKLQQQNLQLAQANS 120

Query: 121 QMLAELNSSKDRLKAFQHELGCKNGVLMARNLDLERKGKLATLQTGEVGTTKCSEAEESM 180
           QMLAELNSSKDRLKAFQHELGCKNGVLMARNLDLERKGKLATLQTGEVGTTKCSEAEESM
Sbjct: 121 QMLAELNSSKDRLKAFQHELGCKNGVLMARNLDLERKGKLATLQTGEVGTTKCSEAEESM 180

Query: 181 NADKDNKPCKTNRRRKSRRESFGGASVLQTEVQKVEGKRPCFRRQSAKFKTEESVKDILE 240
           NADKDNKPCKTNRRRKSRRESFG ASVLQTEVQKVEGKRPCFRRQSAKFKTEESVKDILE
Sbjct: 181 NADKDNKPCKTNRRRKSRRESFG-ASVLQTEVQKVEGKRPCFRRQSAKFKTEESVKDILE 240

Query: 241 TENSSSTDASQCIQTSILPAEVQKAEGKRPGFRRQSARFKIEESVAAKDVLETENSNSTC 300
           TENSSSTDASQCIQT ILPAE QKAEGKRPGFRRQSARFK EESVAAKD+LETENSNSTC
Sbjct: 241 TENSSSTDASQCIQTPILPAEDQKAEGKRPGFRRQSARFKTEESVAAKDILETENSNSTC 300

Query: 301 ASQCIETSILPAEVQKAEGKRPCSRRQSARLKTEEPVGTNDLFEIENSKSTITSQCKETS 360
           ASQCIETSILPAEVQKAEGKRPCSRRQSARLKTEEPVGTNDLFEIENSKST TSQCKETS
Sbjct: 301 ASQCIETSILPAEVQKAEGKRPCSRRQSARLKTEEPVGTNDLFEIENSKSTNTSQCKETS 360

Query: 361 ILQTEVQKVEGE-RPCSRRQSARFKPEEPMATQDLPEIENSTSTSASQCKDIVCELVTTS 420
           ILQTEVQKVEGE RPCSRRQSARFKPEEPM TQDLPEIENSTSTSASQCKD VCELVTTS
Sbjct: 361 ILQTEVQKVEGESRPCSRRQSARFKPEEPMPTQDLPEIENSTSTSASQCKDTVCELVTTS 420

Query: 421 TVERKDHGNSTDKSEVQECRRSSVGRPLRRAVEKVQSYKEIPRNIKMRRQV 461
           TVERKDHGNSTDKSEVQECRRSSVGRPLRRAVEKVQSYKEIPRNIKMRRQV
Sbjct: 421 TVERKDHGNSTDKSEVQECRRSSVGRPLRRAVEKVQSYKEIPRNIKMRRQV 470

[Close]

BLAST of Cp4.1LG01g24620 vs. ExPASy TrEMBL
Match: A0A6J1JRT6 (SHUGOSHIN 2-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487235 PE=3 SV=1)

HSP 1 Score: 816 bits (2107), Expect = 1.88e-296
Identity = 442/472 (93.64%), Postives = 451/472 (95.55%), Query Frame = 0


Query: 1   MEGIISHDSENYDVGGENMKLTGEKILKSCKVGDGQRKQLLDISNLKEQPIVQKRDMKQQ 60
           MEGIISHDSENYDVGG+NMKLTGEKI+KSCKVGDGQRKQL DISNLKEQPIVQKRDMKQQ
Sbjct: 1   MEGIISHDSENYDVGGQNMKLTGEKIMKSCKVGDGQRKQLSDISNLKEQPIVQKRDMKQQ 60

Query: 61  PSLLMNNEYVDKLQK---------SIKHEIIEISGNELEKLRINFQKLQQQNLQLAQANS 120
           PSLLMNNEYVDKLQK         + ++ IIEISGNELEKLRINFQKLQQQNLQLAQANS
Sbjct: 61  PSLLMNNEYVDKLQKENMALMRVLAERNRIIEISGNELEKLRINFQKLQQQNLQLAQANS 120

Query: 121 QMLAELNSSKDRLKAFQHELGCKNGVLMARNLDLERKGKLATLQTGEVGTTKCSEAEESM 180
           QMLAELNSSKDRLKAFQHELGCKNGVLMARNLDLERKGKLATLQTGEVGTTKCSEAEESM
Sbjct: 121 QMLAELNSSKDRLKAFQHELGCKNGVLMARNLDLERKGKLATLQTGEVGTTKCSEAEESM 180

Query: 181 NADKDNKPCKTNRRRKSRRESFGGASVLQTEVQKVEGKRPCFRRQSAKFKTEESV--KDI 240
           NADKDNKPCKTNRRRKSRRESFG ASVLQTEVQKVEGKRPCFRRQSAKFKTEESV  KDI
Sbjct: 181 NADKDNKPCKTNRRRKSRRESFG-ASVLQTEVQKVEGKRPCFRRQSAKFKTEESVAAKDI 240

Query: 241 LETENSSSTDASQCIQTSILPAEVQKAEGKRPGFRRQSARFKIEESVAAKDVLETENSNS 300
           LET+NSSSTDASQCI+TSILPAEVQKAEGKRP FRRQS RFK EESVAAKD+LETENSNS
Sbjct: 241 LETKNSSSTDASQCIETSILPAEVQKAEGKRPCFRRQSTRFKTEESVAAKDILETENSNS 300

Query: 301 TCASQCIETSILPAEVQKAEGKRPCSRRQSARLKTEEPVGTNDLFEIENSKSTITSQCKE 360
           TCASQCIETSILP EVQKAEGKRPCSRRQS RLKTEEPVGTNDLF+IENSKST TSQCKE
Sbjct: 301 TCASQCIETSILPVEVQKAEGKRPCSRRQSERLKTEEPVGTNDLFDIENSKSTNTSQCKE 360

Query: 361 TSILQTEVQKVEGERPCSRRQSARFKPEEPMATQDLPEIENSTSTSASQCKDIVCELVTT 420
           TSILQTEVQKVEGERPCSRRQSARFKPEEPMATQDLPEIENSTSTSASQCKDIVCELVTT
Sbjct: 361 TSILQTEVQKVEGERPCSRRQSARFKPEEPMATQDLPEIENSTSTSASQCKDIVCELVTT 420

Query: 421 STVERKDHGNSTDKSEVQECRRSSVGRPLRRAVEKVQSYKEIPRNIKMRRQV 461
           STVERKDHGNSTDKSEVQECRRSSVGRPLRRAVEKVQSYKEIPRNIKMRRQV
Sbjct: 421 STVERKDHGNSTDKSEVQECRRSSVGRPLRRAVEKVQSYKEIPRNIKMRRQV 471

[Close]

BLAST of Cp4.1LG01g24620 vs. ExPASy TrEMBL
Match: A0A6J1GNJ4 (SHUGOSHIN 2-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111456026 PE=3 SV=1)

HSP 1 Score: 811 bits (2095), Expect = 1.13e-294
Identity = 443/471 (94.06%), Postives = 449/471 (95.33%), Query Frame = 0


Query: 1   MEGIISHDSENYDVGGENMKLTGEKILKSCKVGDGQRKQLLDISNLKEQPIVQKRDMKQQ 60
           MEGIISHDSENYDVGG+NMKLTGEKI+KSCKVGDGQRKQL DISNLKEQPIVQKRDMKQQ
Sbjct: 1   MEGIISHDSENYDVGGQNMKLTGEKIMKSCKVGDGQRKQLSDISNLKEQPIVQKRDMKQQ 60

Query: 61  PSLLMNNEYVDKLQK---------SIKHEIIEISGNELEKLRINFQKLQQQNLQLAQANS 120
           PSLLMNNEYVDKLQK         + ++ IIEISGNELEKLRINFQKLQQQNLQLAQANS
Sbjct: 61  PSLLMNNEYVDKLQKENMALMRVLAERNRIIEISGNELEKLRINFQKLQQQNLQLAQANS 120

Query: 121 QMLAELNSSKDRLKAFQHELGCKNGVLMARNLDLERKGKLATLQTGEVGTTKCSEAEESM 180
           QMLAELNSSKDRLKAFQHELGCKNGVLMARNL  ERKGKLATLQTGEVGTTKCSEAEESM
Sbjct: 121 QMLAELNSSKDRLKAFQHELGCKNGVLMARNL--ERKGKLATLQTGEVGTTKCSEAEESM 180

Query: 181 NADKDNKPCKTNRRRKSRRESFGGASVLQTEVQKVEGKRPCFRRQSAKFKTEESVKDILE 240
           NADKDNKPCKTNRRRKSRRESFG ASVLQTEVQKVEGKRPCFRRQSAKFKTEESVKDILE
Sbjct: 181 NADKDNKPCKTNRRRKSRRESFG-ASVLQTEVQKVEGKRPCFRRQSAKFKTEESVKDILE 240

Query: 241 TENSSSTDASQCIQTSILPAEVQKAEGKRPGFRRQSARFKIEESVAAKDVLETENSNSTC 300
           TENSSSTDASQCIQT ILPAE QKAEGKRPGFRRQSARFK EESVAAKD+LETENSNSTC
Sbjct: 241 TENSSSTDASQCIQTPILPAEDQKAEGKRPGFRRQSARFKTEESVAAKDILETENSNSTC 300

Query: 301 ASQCIETSILPAEVQKAEGKRPCSRRQSARLKTEEPVGTNDLFEIENSKSTITSQCKETS 360
           ASQCIETSILPAEVQKAEGKRPCSRRQSARLKTEEPVGTNDLFEIENSKST TSQCKETS
Sbjct: 301 ASQCIETSILPAEVQKAEGKRPCSRRQSARLKTEEPVGTNDLFEIENSKSTNTSQCKETS 360

Query: 361 ILQTEVQKVEGE-RPCSRRQSARFKPEEPMATQDLPEIENSTSTSASQCKDIVCELVTTS 420
           ILQTEVQKVEGE RPCSRRQSARFKPEEPM TQDLPEIENSTSTSASQCKD VCELVTTS
Sbjct: 361 ILQTEVQKVEGESRPCSRRQSARFKPEEPMPTQDLPEIENSTSTSASQCKDTVCELVTTS 420

Query: 421 TVERKDHGNSTDKSEVQECRRSSVGRPLRRAVEKVQSYKEIPRNIKMRRQV 461
           TVERKDHGNSTDKSEVQECRRSSVGRPLRRAVEKVQSYKEIPRNIKMRRQV
Sbjct: 421 TVERKDHGNSTDKSEVQECRRSSVGRPLRRAVEKVQSYKEIPRNIKMRRQV 468

[Close]

BLAST of Cp4.1LG01g24620 vs. ExPASy TrEMBL
Match: A0A6J1JT04 (SHUGOSHIN 2-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487235 PE=3 SV=1)

HSP 1 Score: 811 bits (2095), Expect = 1.31e-294
Identity = 442/473 (93.45%), Postives = 451/473 (95.35%), Query Frame = 0


Query: 1   MEGIISHDSENYDVGGENMKLTGEKILKSCKVGDGQRKQLLDISNLKEQPIVQKRDMKQQ 60
           MEGIISHDSENYDVGG+NMKLTGEKI+KSCKVGDGQRKQL DISNLKEQPIVQKRDMKQQ
Sbjct: 1   MEGIISHDSENYDVGGQNMKLTGEKIMKSCKVGDGQRKQLSDISNLKEQPIVQKRDMKQQ 60

Query: 61  PSLLMNNEYVDKLQK---------SIKHEIIEISGNELEKLRINFQKLQQQNLQLAQANS 120
           PSLLMNNEYVDKLQK         + ++ IIEISGNELEKLRINFQKLQQQNLQLAQANS
Sbjct: 61  PSLLMNNEYVDKLQKENMALMRVLAERNRIIEISGNELEKLRINFQKLQQQNLQLAQANS 120

Query: 121 QMLAELNSSKDRLKAFQHELGCKNGVLMARNLDLERKGKLATLQTGEVGTTKCSEAEESM 180
           QMLAELNSSKDRLKAFQHELGCKNGVLMARNLDLERKGKLATLQTGEVGTTKCSEAEESM
Sbjct: 121 QMLAELNSSKDRLKAFQHELGCKNGVLMARNLDLERKGKLATLQTGEVGTTKCSEAEESM 180

Query: 181 NADKDNKPCKTNRRRKSRRESFGGASVLQTEVQKVEGKRPCFRRQSAKFKTEESV--KDI 240
           NADKDNKPCKTNRRRKSRRESFG ASVLQTEVQKVEGKRPCFRRQSAKFKTEESV  KDI
Sbjct: 181 NADKDNKPCKTNRRRKSRRESFG-ASVLQTEVQKVEGKRPCFRRQSAKFKTEESVAAKDI 240

Query: 241 LETENSSSTDASQCIQTSILPAEVQKAEGKRPGFRRQSARFKIEESVAAKDVLETENSNS 300
           LET+NSSSTDASQCI+TSILPAEVQKAEGKRP FRRQS RFK EESVAAKD+LETENSNS
Sbjct: 241 LETKNSSSTDASQCIETSILPAEVQKAEGKRPCFRRQSTRFKTEESVAAKDILETENSNS 300

Query: 301 TCASQCIETSILPAEVQKAEGKRPCSRRQSARLKTEEPVGTNDLFEIENSKSTITSQCKE 360
           TCASQCIETSILP EVQKAEGKRPCSRRQS RLKTEEPVGTNDLF+IENSKST TSQCKE
Sbjct: 301 TCASQCIETSILPVEVQKAEGKRPCSRRQSERLKTEEPVGTNDLFDIENSKSTNTSQCKE 360

Query: 361 TSILQTEVQKVEGE-RPCSRRQSARFKPEEPMATQDLPEIENSTSTSASQCKDIVCELVT 420
           TSILQTEVQKVEGE RPCSRRQSARFKPEEPMATQDLPEIENSTSTSASQCKDIVCELVT
Sbjct: 361 TSILQTEVQKVEGESRPCSRRQSARFKPEEPMATQDLPEIENSTSTSASQCKDIVCELVT 420

Query: 421 TSTVERKDHGNSTDKSEVQECRRSSVGRPLRRAVEKVQSYKEIPRNIKMRRQV 461
           TSTVERKDHGNSTDKSEVQECRRSSVGRPLRRAVEKVQSYKEIPRNIKMRRQV
Sbjct: 421 TSTVERKDHGNSTDKSEVQECRRSSVGRPLRRAVEKVQSYKEIPRNIKMRRQV 472

[Close]

BLAST of Cp4.1LG01g24620 vs. TAIR 10
Match: AT5G04320.2 (Shugoshin C terminus )

HSP 1 Score: 124.4 bits (311), Expect = 2.4e-28
Identity = 132/457 (28.88%), Postives = 216/457 (47.26%), Query Frame = 0


Query: 52  VQKRDMKQQPSLLMNN-EYVDKLQK---------SIKHEIIEISGNELEKLRINFQKLQQ 111
           + K + +Q+ ++L ++ EY  KLQK         + +++++E+SG E++KLRIN + +Q+
Sbjct: 25  MDKEETQQKENMLFSSQEYAAKLQKENMTLMKALAHRNKLVELSGIEIQKLRINLRSVQE 84

Query: 112 QNLQLAQANSQMLAELNSSKDRLKAFQHELGCKNGVLMARNLDLERKGKLATLQTGEVGT 171
           +NLQLAQANSQMLAELN+++DRLK  QHELGCKN +L  +    E+       ++ +  +
Sbjct: 85  KNLQLAQANSQMLAELNTNRDRLKDLQHELGCKNALLKVKKHLEEQVLPRTHHESKDKVS 144

Query: 172 TKCSEAEESMNADKDNKPCKTNRRRKSRRESFGGASVLQTEVQKVEGKRPCFRRQSAKFK 231
              S+ +       D K   T R+R +R +S   A V    V     K    RR S    
Sbjct: 145 ASASDGDCKSFQVHDIKHKDTKRKRTTRIKSSVSADVKPIPVNDSNSKANRKRRVSGVID 204

Query: 232 TEESVKDILETEN---------SSSTDASQCIQTSILPAEV----QKAEGKRPGFRRQSA 291
           T    ++I +TE+           + D    +    +P       +    KR   RRQS 
Sbjct: 205 TTGIPEEICQTEDDIDKGVVSRGVNQDIDNVVNKKFVPDAANPVKESVHRKRQCTRRQST 264

Query: 292 RFKIEESVAAKDVLETENSNSTCASQCIETSILPA-----------------EVQKAEGK 351
           RF ++E+   + +LE + +  +  +         A                 EV++   +
Sbjct: 265 RFDVQETKQTEKLLEMDGAKESKETASFSLRRRSARLRHEEAEPCKSLHEGDEVRETIKR 324

Query: 352 RPCSRRQSARLKTEEPVGTNDLFEIENSKSTI-------TSQCKETSILQTEVQKVEGER 411
           R  S R SAR   +EP  T +    ++++S +        S+  E S  + E +++  +R
Sbjct: 325 RRVSLRLSARFDIQEPHVT-ETSNADDARSIVIEESAGSRSESVEPSESRHETKEITRKR 384

Query: 412 PCS-RRQSARFKPEEPMATQDLPEIENSTSTSASQCKDIVCELVTTSTVERKDHGNSTDK 461
             S RRQS + K +   A +++    +  +T   +C             E KD   + + 
Sbjct: 385 SFSTRRQSTKGKSQTDEAIKEIATDPSLVNTIVQEC---------DQETESKDKPKADEN 444

[Close]

BLAST of Cp4.1LG01g24620 vs. TAIR 10
Match: AT5G04320.1 (Shugoshin C terminus )

HSP 1 Score: 121.3 bits (303), Expect = 2.0e-27
Identity = 126/428 (29.44%), Postives = 201/428 (46.96%), Query Frame = 0


Query: 73  LQKSIKH--EIIEISGNELEKLRINFQKLQQQNLQLAQANSQMLAELNSSKDRLKAFQHE 132
           L K++ H  +++E+SG E++KLRIN + +Q++NLQLAQANSQMLAELN+++DRLK  QHE
Sbjct: 3   LMKALAHRNKLVELSGIEIQKLRINLRSVQEKNLQLAQANSQMLAELNTNRDRLKDLQHE 62

Query: 133 LGCKNGVLMARNLDLERKGKLATLQTGEVGTTKCSEAEESMNADKDNKPCKTNRRRKSRR 192
           LGCKN +L  +    E+       ++ +  +   S+ +       D K   T R+R +R 
Sbjct: 63  LGCKNALLKVKKHLEEQVLPRTHHESKDKVSASASDGDCKSFQVHDIKHKDTKRKRTTRI 122

Query: 193 ESFGGASVLQTEVQKVEGKRPCFRRQSAKFKTEESVKDILETEN---------SSSTDAS 252
           +S   A V    V     K    RR S    T    ++I +TE+           + D  
Sbjct: 123 KSSVSADVKPIPVNDSNSKANRKRRVSGVIDTTGIPEEICQTEDDIDKGVVSRGVNQDID 182

Query: 253 QCIQTSILPAEV----QKAEGKRPGFRRQSARFKIEESVAAKDVLETENSNSTCASQCIE 312
             +    +P       +    KR   RRQS RF ++E+   + +LE + +  +  +    
Sbjct: 183 NVVNKKFVPDAANPVKESVHRKRQCTRRQSTRFDVQETKQTEKLLEMDGAKESKETASFS 242

Query: 313 TSILPA-----------------EVQKAEGKRPCSRRQSARLKTEEPVGTNDLFEIENSK 372
                A                 EV++   +R  S R SAR   +EP  T +    ++++
Sbjct: 243 LRRRSARLRHEEAEPCKSLHEGDEVRETIKRRRVSLRLSARFDIQEPHVT-ETSNADDAR 302

Query: 373 STI-------TSQCKETSILQTEVQKVEGERPCS-RRQSARFKPEEPMATQDLPEIENST 432
           S +        S+  E S  + E +++  +R  S RRQS + K +   A +++    +  
Sbjct: 303 SIVIEESAGSRSESVEPSESRHETKEITRKRSFSTRRQSTKGKSQTDEAIKEIATDPSLV 362

Query: 433 STSASQCKDIVCELVTTSTVERKDHGNSTDKSEVQECRRSSVGRPLRRAVEKVQSYKEIP 461
           +T   +C             E KD   + +   +   RRSSVGRP R A EKVQSY+E+ 
Sbjct: 363 NTIVQEC---------DQETESKDKPKADENEGM--TRRSSVGRPSRHAAEKVQSYREVS 418

[Close]

BLAST of Cp4.1LG01g24620 vs. TAIR 10
Match: AT3G10440.1 (Shugoshin C terminus )

HSP 1 Score: 110.2 bits (274), Expect = 4.6e-24
Identity = 160/562 (28.47%), Postives = 240/562 (42.70%), Query Frame = 0


Query: 15  GGENMKLTGEKILKSCKVGDGQRKQLLDISNLKEQPIVQKRDMK--QQPSLLMNNEYVDK 74
           G    K  GEK++    +   QR++L DI+NL+ Q  +  +  K  QQ  L+ + E  + 
Sbjct: 16  GVRTNKAKGEKMVLEPPMNSAQRRKLGDITNLQNQKNLMNQGAKHQQQAILISSKENAEN 75

Query: 75  LQK---SIKHEIIEISG--NELEKLRINFQKLQQQNLQLAQANSQMLAELNSSKDRLKAF 134
           LQK    +   ++E  G  ++L+KLRI FQK+Q+QNL LAQAN+++LAE N+SKD+LK  
Sbjct: 76  LQKENTKLMKVVMERDGIKSDLKKLRIEFQKVQEQNLLLAQANTRILAEFNTSKDQLKVL 135

Query: 135 QHELGCKNGVLMARNLDLERKGKLATLQTGEV--------GTTKC--------SEAEESM 194
           QHELGCKNG++MAR + L+ +    T    +V        G  K           A  S 
Sbjct: 136 QHELGCKNGLVMARKMLLKEQTLPCTRHASKVKAQANACGGACKTFQPNDADHEHASGSS 195

Query: 195 NADKDNKPCKTN-RRRKSRRESFGGASVL----------QTE------------------ 254
           NA+   +  K N +RR S R++   + VL          Q E                  
Sbjct: 196 NANSLQRNEKANSKRRVSGRKNPANSEVLDIIGRSGETCQMEDNIDNKKLVSDSDNDAEN 255

Query: 255 --VQKVEGKRPCFRRQSAKFKTEES-----------VKDILETENSSSTDASQCIQTSIL 314
                V+ KR C  RQS+  KT E+            K+I      S T  S  +++   
Sbjct: 256 HINDNVQSKRYCAGRQSSSSKTREASQTETLQKVVDAKEIKGDARFSLTKHSDWLKSQEP 315

Query: 315 PAEVQKAEGKRPGFRRQSARFKIEE---SVAAKDVLET---------------------E 374
                  E + P  RR+SAR K +E   S +  D +ET                     +
Sbjct: 316 EPSESLYESRFP-LRRRSARLKSQEPEPSESFHDSIETTKRRRSAIRSAMFNIQELGVIQ 375

Query: 375 NSN-----------STCASQCIETSILPAEVQKAEGK------RPCSRRQSARLKTEEPV 434
           N N           + C+++   T   P  V+  + K      R   RRQSAR   +E +
Sbjct: 376 NLNGLPDDQEIAAKARCSAREQSTGSKPEAVEPHDTKEIIGKSRISLRRQSARFNFQE-L 435

Query: 435 GTNDLFEIENSKSTITSQCKETSILQTEVQKVEGERP------------CSRRQSARFKP 459
           G  +     +   TI +  +  +  Q+   K E   P             SRRQSA  + 
Sbjct: 436 GVTENLNGPHDDQTIAANARCCASEQSIGSKPEAVEPHDIEERIGKIRVSSRRQSANIET 495

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g24620 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0WTB8	3.3e-27	28.88	SHUGOSHIN 2 OS=Arabidopsis thaliana OX=3702 GN=SGO2 PE=2 SV=1	[more]
F4J3S1	6.5e-23	28.47	SHUGOSHIN 1 OS=Arabidopsis thaliana OX=3702 GN=SGO1 PE=3 SV=1	[more]
E3VXF2	6.1e-21	29.26	Shugoshin-1 OS=Oryza sativa subsp. japonica OX=39947 GN=SGO1 PE=2 SV=1	[more]
Q4QSC8	2.9e-15	26.47	Shugoshin-1 OS=Zea mays OX=4577 GN=SGO1 PE=2 SV=2	[more]

BLAST of Cp4.1LG01g24620 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023524534.1	3.61e-310	97.23	SHUGOSHIN 2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022953514.1	1.13e-299	94.68	SHUGOSHIN 2-like isoform X2 [Cucurbita moschata]	[more]
XP_022953497.1	7.90e-298	94.48	SHUGOSHIN 2-like isoform X1 [Cucurbita moschata] >XP_022953506.1 SHUGOSHIN 2-lik...	[more]
KAG6602286.1	7.70e-297	94.46	SHUGOSHIN 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022990344.1	3.89e-296	93.64	SHUGOSHIN 2-like isoform X2 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG01g24620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GPX4	5.47e-300	94.68	SHUGOSHIN 2-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456026 PE=3 S...	[more]
A0A6J1GNE0	3.82e-298	94.48	SHUGOSHIN 2-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456026 PE=3 S...	[more]
A0A6J1JRT6	1.88e-296	93.64	SHUGOSHIN 2-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487235 PE=3 SV=...	[more]
A0A6J1GNJ4	1.13e-294	94.06	SHUGOSHIN 2-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111456026 PE=3 S...	[more]
A0A6J1JT04	1.31e-294	93.45	SHUGOSHIN 2-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487235 PE=3 SV=...	[more]

BLAST of Cp4.1LG01g24620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G04320.2	2.4e-28	28.88	Shugoshin C terminus	[more]
AT5G04320.1	2.0e-27	29.44	Shugoshin C terminus	[more]
AT3G10440.1	4.6e-24	28.47	Shugoshin C terminus	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 82..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 165..196
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 413..441
IPR011515	Shugoshin, C-terminal	PFAM	PF07557	Shugoshin_C	coord: 435..459 e-value: 2.8E-6 score: 27.0
IPR044693	Shugoshin, plant	PANTHER	PTHR34373	SHUGOSHIN 2	coord: 304..460 coord: 26..298

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g24620.1	Cp4.1LG01g24620.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034090	maintenance of meiotic sister chromatid cohesion
biological_process	GO:0045132	meiotic chromosome segregation
biological_process	GO:0045144	meiotic sister chromatid segregation
cellular_component	GO:0000775	chromosome, centromeric region
cellular_component	GO:0005634	nucleus