Cp4.1LG01g24320 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG01g24320
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionUbiquitin family protein
LocationCp4.1LG01: 19026375 .. 19029083 (-)
RNA-Seq ExpressionCp4.1LG01g24320
SyntenyCp4.1LG01g24320
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGGGTTTTCCATGGCGGTAGAAATATATTATAAAAAATGAACGCGTACGAAAATTCTCTCTTTACTTTGGAATTCTGCTCTGTTGAACTCTGAGACGACCTAGGGTTTTACTTTCTTGGGGGAAAGAAGAAGAGGAAGAAGAAGAAGAAGATGATCGAGGTGGTGCTGAACGATCGTCTGGGGAAGAAGGTGAGAGTGAAGTGCAACGAGGACGACACCATCGGCGACTTGAAGAAGCTTGTGGCTGCTCAGACTGGGACTAGAGCCGAGAAGATTCGGATTCAGAAATGGTACAATATCTACAAGGATCATATTACTCTGAGGGATTACGAAGTCCACGATGGCATGGGCCTTGAACTCTACTACAATTAAGTAATTTTCTGATCGCTCTGGATATTTTATTTTTGTATGGAATGAAGTTTATTTCTTTTTATCATGTTGGATTTTTCCTGGAACTTTGTGTTGAAGGTTATGATTTTTGAGATTTTGATGTTCGAGTCCTACTCCGTTATGAAATTAATGATTCCATCCATGAATTTTGAACTGGATAAAGAGAGAAAGTGTGGTATTTTTATAATCTTGTTTGATAGCCTTTTAGGGCGACGTTTTGTTGCGGTTATTCAACTCTGGTTGTTTAGAGTAGAGATGTAAAAATAATCGAGAACCTTGCCAATTTTTGTTATAATCTGTCTTGCAGTAGAGATTTTAATATCTTCATCTTGTAGATTTTCCTCGTACTTCCAATTCCTGTTACTGTAAAATGCCAATTGAAGTTTGATGATGACAGAGTCTAATGGAGAAAGAACACTTTTAATGTGAAAGTACATATAGTTAACAATTTTCTTTTTTGTGGATAAGTATTAATTTATGATTGATTATGCATGCTTTAGCTGTTGCAGATTAGATATCAAAGGAATTGGTGAAAACAAAGGTGCTAGAATCTAGATGAATCTTGTGTTGTTGTAGCAATTTGCTCATTTCTCTATCTATGTATCCATTATGTCTTTATTTGGAGAATGGTTCATTCTAGGTGACATAGGAAGTCCTTTGTAGAGTTCCCAAAGTCAAGACGGCTAAGTGGAAAGCTTTTGGAAAAATAAATTTTTGACTTCGTCCATGTAGGGGACTGCTTCTGAATTAAGTTGCGAAGTCTCCTGCTCTTGTTCAACTAGTTCTTTCATAACAATTCCAAGTCATTTAAAGATGAAATCATGGATTGACCATGGTGTCTTATATAACCATGTTGGATCAAATAATGAGTCATTCATCATCCATGATCGATAATCTAATGGATCTTGCAAAACCGTTTTTACCTGATAAAAGTTATTGGTGGGAAGGCTTTCTTTATATCCTTGTACCTTACCAATGAAATTCATTTACCTCCTTATCTTTTTGTATGGTGGAGTTATCAGTAAGCTTGCTCGTTGCAACCTTTAATCAACAGTTTCCTCAAAACATCCACCCGTTCAGGCCTATTAGAAAACATAATAACGAATCATCCTGTATTTATCCCCTCAAGGTTTTCACTCTCCCGAAAGGTTTGCCATTTAATAACATTGAAAACTGCATCTTTGCTGGTACAACTTAATATTCACTTATGCCATGTTTCACTAAAGCCATTTTTCTTGAAACCACATCAAGGAAATGCCAGAAAGTAGGTAAAAATTTCTGCCATATGAACCAGATGAAGATCATCTGTGAGCCACACACGAACAATGTGGAGGGGATATTTTTCTGGCAACTATTTTGTGCCAAATAGAGACAAGTGGGTGGGGAAAGTTCTTCTAAATGCCTCAAACGCTGATTTACAGTTAGAATTCGTTATCCCTTACTTTCTCTCCCTCTCTCCCTGATTTGGAGATAACTTCACCCCTCCAAATGGCTAAACTTGTGAGGATTTGCAACAAATAGAGAAATCTTAGTCAAAATTCCATTTCTAAATCTCTTTCAAAAAAGAATCAAAGCACTCTAAACTATTGGGACACTAGGACTGGTCGATTGCAACTCTACTTGGAAAGAAAATTTCTTAAGGAGGTGAAGTTTTTCTTTTGGACTCTTCATTTAGGAAGCCTTACTGGATGAATGTGTTCTCTTCTAGTTAAGAACACAACTACATATGGTTGGTATCATCGATTATTTGCCTGGTCTGCGGTCAAATATTGCATTGAACTCCTTTCATTAGCATTATAATGATATTTTATGGCATGTATCAGGCTTAAGATACTACGCATGGTTGCTTTCCACTTGGAAAAAGTTGTCTTGTACATGGTCGCTGATTTTGCCTGTTTTGTTCACTTGATGCAGGGCATGGAAAGCCATACGTGGGCTTTGCTTTCACTCTCTCGTTAGCCAGCTCAATGATGTGGTACGGGGTTCCCTGTTTAATTTGTATTATAATAAGCATATATTATTATGACTGTTTCAGAATCAAACTCGCAAGTTTCATGTAATGCAATCAAACTGCTTATTCGGTGATATTATGTGTGGTAACTTCTATTATATTTATGTTCTAAGGCCTGTTTGGTTTTGTGTTTTCATTTTGAAAAAACTATATAGACGACAATGGAACAATATGGTCCTAGAGATGAACTGTCATTCTCGATCCTATGATTTTTTCTATTACTTTCCTTGTTGCCTCATTTATTTGAATAATTAGGATGGAGGCCACAGAATCATTGTTTGAAGATTCGAATTCTGTCTGCAAATGAA

mRNA sequence

CGGGTTTTCCATGGCGGTAGAAATATATTATAAAAAATGAACGCGTACGAAAATTCTCTCTTTACTTTGGAATTCTGCTCTGTTGAACTCTGAGACGACCTAGGGTTTTACTTTCTTGGGGGAAAGAAGAAGAGGAAGAAGAAGAAGAAGATGATCGAGGTGGTGCTGAACGATCGTCTGGGGAAGAAGGTGAGAGTGAAGTGCAACGAGGACGACACCATCGGCGACTTGAAGAAGCTTGTGGCTGCTCAGACTGGGACTAGAGCCGAGAAGATTCGGATTCAGAAATGGTACAATATCTACAAGGATCATATTACTCTGAGGGATTACGAAGTCCACGATGGCATGGGCCTTGAACTCTACTACAATTAAGGCATGGAAAGCCATACGTGGGCTTTGCTTTCACTCTCTCGTTAGCCAGCTCAATGATGTGGTACGGGGTTCCCTGTTTAATTTGTATTATAATAAGCATATATTATTATGACTGTTTCAGAATCAAACTCGCAAGTTTCATGTAATGCAATCAAACTGCTTATTCGGTGATATTATGTGTGGTAACTTCTATTATATTTATGTTCTAAGGCCTGTTTGGTTTTGTGTTTTCATTTTGAAAAAACTATATAGACGACAATGGAACAATATGGTCCTAGAGATGAACTGTCATTCTCGATCCTATGATTTTTTCTATTACTTTCCTTGTTGCCTCATTTATTTGAATAATTAGGATGGAGGCCACAGAATCATTGTTTGAAGATTCGAATTCTGTCTGCAAATGAA

Coding sequence (CDS)

ATGATCGAGGTGGTGCTGAACGATCGTCTGGGGAAGAAGGTGAGAGTGAAGTGCAACGAGGACGACACCATCGGCGACTTGAAGAAGCTTGTGGCTGCTCAGACTGGGACTAGAGCCGAGAAGATTCGGATTCAGAAATGGTACAATATCTACAAGGATCATATTACTCTGAGGGATTACGAAGTCCACGATGGCATGGGCCTTGAACTCTACTACAATTAA

Protein sequence

MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDYEVHDGMGLELYYN
Homology
[Close]
BLAST of Cp4.1LG01g24320 vs. ExPASy Swiss-Prot
Match: Q9FGZ9 (Ubiquitin-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=UBL5 PE=3 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 1.2e-35
Identity = 70/73 (95.89%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY 60
          MIEVVLNDRLGKKVRVKCN+DDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITL+DY
Sbjct: 1  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60

Query: 61 EVHDGMGLELYYN 74
          E+HDGMGLELYYN
Sbjct: 61 EIHDGMGLELYYN 73

[Close]
BLAST of Cp4.1LG01g24320 vs. ExPASy Swiss-Prot
Match: Q3T0Z3 (Ubiquitin-like protein 5 OS=Bos taurus OX=9913 GN=UBL5 PE=3 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 5.3e-28
Identity = 57/72 (79.17%), Postives = 64/72 (88.89%), Query Frame = 0 

Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY 60
          MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI ++KWY I+KDH++L DY
Sbjct: 1  MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDY 60

Query: 61 EVHDGMGLELYY 73
          E+HDGM LELYY
Sbjct: 61 EIHDGMNLELYY 72

[Close]
BLAST of Cp4.1LG01g24320 vs. ExPASy Swiss-Prot
Match: Q9BZL1 (Ubiquitin-like protein 5 OS=Homo sapiens OX=9606 GN=UBL5 PE=1 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 5.3e-28
Identity = 57/72 (79.17%), Postives = 64/72 (88.89%), Query Frame = 0 

Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY 60
          MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI ++KWY I+KDH++L DY
Sbjct: 1  MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDY 60

Query: 61 EVHDGMGLELYY 73
          E+HDGM LELYY
Sbjct: 61 EIHDGMNLELYY 72

[Close]
BLAST of Cp4.1LG01g24320 vs. ExPASy Swiss-Prot
Match: Q6EGX7 (Ubiquitin-like protein 5 OS=Mesocricetus auratus OX=10036 GN=UBL5 PE=3 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 5.3e-28
Identity = 57/72 (79.17%), Postives = 64/72 (88.89%), Query Frame = 0 

Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY 60
          MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI ++KWY I+KDH++L DY
Sbjct: 1  MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDY 60

Query: 61 EVHDGMGLELYY 73
          E+HDGM LELYY
Sbjct: 61 EIHDGMNLELYY 72

[Close]
BLAST of Cp4.1LG01g24320 vs. ExPASy Swiss-Prot
Match: Q9EPV8 (Ubiquitin-like protein 5 OS=Mus musculus OX=10090 GN=Ubl5 PE=1 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 5.3e-28
Identity = 57/72 (79.17%), Postives = 64/72 (88.89%), Query Frame = 0 

Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY 60
          MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI ++KWY I+KDH++L DY
Sbjct: 1  MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDY 60

Query: 61 EVHDGMGLELYY 73
          E+HDGM LELYY
Sbjct: 61 EIHDGMNLELYY 72

[Close]
BLAST of Cp4.1LG01g24320 vs. NCBI nr
Match: XP_022922324.1 (ubiquitin-like protein 5 [Cucurbita moschata] >XP_022922332.1 ubiquitin-like protein 5 [Cucurbita moschata] >XP_022990505.1 ubiquitin-like protein 5 [Cucurbita maxima] >XP_022990507.1 ubiquitin-like protein 5 [Cucurbita maxima] >XP_023550983.1 ubiquitin-like protein 5 [Cucurbita pepo subsp. pepo] >XP_023551066.1 ubiquitin-like protein 5 [Cucurbita pepo subsp. pepo] >KAG7032995.1 Ubiquitin-like protein 5 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 152 bits (383), Expect = 2.45e-46
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY 60
          MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY
Sbjct: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY 60

Query: 61 EVHDGMGLELYYN 73
          EVHDGMGLELYYN
Sbjct: 61 EVHDGMGLELYYN 73

[Close]
BLAST of Cp4.1LG01g24320 vs. NCBI nr
Match: XP_008785280.1 (ubiquitin-like protein 5 [Phoenix dactylifera])

HSP 1 Score: 150 bits (379), Expect = 9.99e-46
Identity = 71/73 (97.26%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY 60
          MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGT+AEKIRIQKWYNIYKDHITLRDY
Sbjct: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTKAEKIRIQKWYNIYKDHITLRDY 60

Query: 61 EVHDGMGLELYYN 73
          E+HDGMGLELYYN
Sbjct: 61 EIHDGMGLELYYN 73

[Close]
BLAST of Cp4.1LG01g24320 vs. NCBI nr
Match: XP_017249268.1 (PREDICTED: ubiquitin-like protein 5 [Daucus carota subsp. sativus] >XP_017249269.1 PREDICTED: ubiquitin-like protein 5 [Daucus carota subsp. sativus] >XP_017249270.1 PREDICTED: ubiquitin-like protein 5 [Daucus carota subsp. sativus] >KZM95859.1 hypothetical protein DCAR_019101 [Daucus carota subsp. sativus])

HSP 1 Score: 150 bits (379), Expect = 9.99e-46
Identity = 71/73 (97.26%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY 60
          MIEVVLNDRLGKKVRVKCN+DDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY
Sbjct: 1  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY 60

Query: 61 EVHDGMGLELYYN 73
          E+HDGMGLELYYN
Sbjct: 61 EIHDGMGLELYYN 73

[Close]
BLAST of Cp4.1LG01g24320 vs. NCBI nr
Match: XP_002863802.1 (ubiquitin-like protein 5 [Arabidopsis lyrata subsp. lyrata] >XP_006281412.1 ubiquitin-like protein 5 [Capsella rubella] >XP_008456484.1 PREDICTED: ubiquitin-like protein 5 [Cucumis melo] >XP_008462656.1 PREDICTED: ubiquitin-like protein 5 [Cucumis melo] >XP_008462662.1 PREDICTED: ubiquitin-like protein 5 [Cucumis melo] >XP_008462668.1 PREDICTED: ubiquitin-like protein 5 [Cucumis melo] >XP_009108927.1 ubiquitin-like protein 5 [Brassica rapa] >XP_013618092.1 PREDICTED: ubiquitin-like protein 5 [Brassica oleracea var. oleracea] >XP_013729902.1 ubiquitin-like protein 5 [Brassica napus] >XP_013751522.1 ubiquitin-like protein 5 [Brassica napus] >XP_016902862.1 PREDICTED: ubiquitin-like protein 5 [Cucumis melo] >XP_016902865.1 PREDICTED: ubiquitin-like protein 5 [Cucumis melo] >XP_016902868.1 PREDICTED: ubiquitin-like protein 5 [Cucumis melo] >XP_016902869.1 PREDICTED: ubiquitin-like protein 5 [Cucumis melo] >XP_018434387.1 PREDICTED: ubiquitin-like protein 5 [Raphanus sativus] >XP_019088200.1 PREDICTED: ubiquitin-like protein 5 [Camelina sativa] >XP_019095922.1 PREDICTED: ubiquitin-like protein 5 [Camelina sativa] >XP_019097853.1 PREDICTED: ubiquitin-like protein 5 [Camelina sativa] >XP_022134421.1 ubiquitin-like protein 5 [Momordica charantia] >XP_022134422.1 ubiquitin-like protein 5 [Momordica charantia] >XP_022152891.1 ubiquitin-like protein 5 [Momordica charantia] >XP_022152892.1 ubiquitin-like protein 5 [Momordica charantia] >XP_022152893.1 ubiquitin-like protein 5 [Momordica charantia] >XP_022937457.1 ubiquitin-like protein 5 [Cucurbita moschata] >XP_022937458.1 ubiquitin-like protein 5 [Cucurbita moschata] >XP_022939919.1 ubiquitin-like protein 5 [Cucurbita moschata] >XP_022939920.1 ubiquitin-like protein 5 [Cucurbita moschata] >XP_022969698.1 ubiquitin-like protein 5 [Cucurbita maxima] >XP_022969699.1 ubiquitin-like protein 5 [Cucurbita maxima] >XP_022993515.1 ubiquitin-like protein 5 [Cucurbita maxima] >XP_022993517.1 ubiquitin-like protein 5 [Cucurbita maxima] >XP_023537479.1 ubiquitin-like protein 5 [Cucurbita pepo subsp. pepo] >XP_023537480.1 ubiquitin-like protein 5 [Cucurbita pepo subsp. pepo] >XP_023537481.1 ubiquitin-like protein 5 [Cucurbita pepo subsp. pepo] >XP_023549555.1 ubiquitin-like protein 5 [Cucurbita pepo subsp. pepo] >XP_023549556.1 ubiquitin-like protein 5 [Cucurbita pepo subsp. pepo] >XP_038886602.1 ubiquitin-like protein 5 [Benincasa hispida] >XP_038894431.1 ubiquitin-like protein 5 [Benincasa hispida] >XP_038894432.1 ubiquitin-like protein 5 [Benincasa hispida] >XP_038894433.1 ubiquitin-like protein 5 [Benincasa hispida] >KAA0036470.1 hypothetical protein E6C27_scaffold147G00390 [Cucumis melo var. makuwa] >KAF3532776.1 hypothetical protein DY000_02041958 [Brassica cretica] >KAF8086028.1 hypothetical protein N665_0639s0036 [Sinapis alba] >KAG2247010.1 hypothetical protein Bca52824_086638 [Brassica carinata] >KAG5415528.1 hypothetical protein IGI04_003095 [Brassica rapa subsp. trilocularis] >KAG7016291.1 Ubiquitin-like protein 5, partial [Cucurbita argyrosperma subsp. argyrosperma] >KAG7533131.1 Ubiquitin domain [Arabidopsis thaliana x Arabidopsis arenosa] >KAG7536852.1 Ubiquitin domain [Arabidopsis suecica] >CAE6225876.1 unnamed protein product [Arabidopsis arenosa] >VDD51759.1 unnamed protein product [Brassica oleracea] >VVB08313.1 unnamed protein product [Arabis nemorensis])

HSP 1 Score: 150 bits (379), Expect = 9.99e-46
Identity = 71/73 (97.26%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY 60
          MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITL+DY
Sbjct: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60

Query: 61 EVHDGMGLELYYN 73
          E+HDGMGLELYYN
Sbjct: 61 EIHDGMGLELYYN 73

[Close]
BLAST of Cp4.1LG01g24320 vs. NCBI nr
Match: KAF8706523.1 (hypothetical protein HU200_030800 [Digitaria exilis] >KAF8707119.1 hypothetical protein HU200_030356 [Digitaria exilis] >CAB3459337.1 unnamed protein product [Digitaria exilis] >CAB3463037.1 unnamed protein product [Digitaria exilis])

HSP 1 Score: 150 bits (378), Expect = 1.42e-45
Identity = 72/73 (98.63%), Postives = 72/73 (98.63%), Query Frame = 0 

Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY 60
          MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTR EKIRIQKWYNIYKDHITLRDY
Sbjct: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKIRIQKWYNIYKDHITLRDY 60

Query: 61 EVHDGMGLELYYN 73
          EVHDGMGLELYYN
Sbjct: 61 EVHDGMGLELYYN 73

[Close]
BLAST of Cp4.1LG01g24320 vs. ExPASy TrEMBL
Match: A0A6J1JQA2 (ubiquitin-like protein 5 OS=Cucurbita maxima OX=3661 GN=LOC111487346 PE=4 SV=1)

HSP 1 Score: 152 bits (383), Expect = 1.19e-46
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY 60
          MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY
Sbjct: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY 60

Query: 61 EVHDGMGLELYYN 73
          EVHDGMGLELYYN
Sbjct: 61 EVHDGMGLELYYN 73

[Close]
BLAST of Cp4.1LG01g24320 vs. ExPASy TrEMBL
Match: A0A6J1E2Y4 (ubiquitin-like protein 5 OS=Cucurbita moschata OX=3662 GN=LOC111430336 PE=4 SV=1)

HSP 1 Score: 152 bits (383), Expect = 1.19e-46
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY 60
          MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY
Sbjct: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY 60

Query: 61 EVHDGMGLELYYN 73
          EVHDGMGLELYYN
Sbjct: 61 EVHDGMGLELYYN 73

[Close]
BLAST of Cp4.1LG01g24320 vs. ExPASy TrEMBL
Match: A0A6J1I1R2 (ubiquitin-like protein 5 OS=Cucurbita maxima OX=3661 GN=LOC111468647 PE=4 SV=1)

HSP 1 Score: 150 bits (379), Expect = 4.84e-46
Identity = 71/73 (97.26%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY 60
          MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITL+DY
Sbjct: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60

Query: 61 EVHDGMGLELYYN 73
          E+HDGMGLELYYN
Sbjct: 61 EIHDGMGLELYYN 73

[Close]
BLAST of Cp4.1LG01g24320 vs. ExPASy TrEMBL
Match: A0A398AR32 (Ubiquitin-like domain-containing protein OS=Brassica campestris OX=3711 GN=BRAA01T03406Z PE=4 SV=1)

HSP 1 Score: 150 bits (379), Expect = 4.84e-46
Identity = 71/73 (97.26%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY 60
          MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITL+DY
Sbjct: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60

Query: 61 EVHDGMGLELYYN 73
          E+HDGMGLELYYN
Sbjct: 61 EIHDGMGLELYYN 73

[Close]
BLAST of Cp4.1LG01g24320 vs. ExPASy TrEMBL
Match: A0A1S3C3F9 (ubiquitin-like protein 5 OS=Cucumis melo OX=3656 GN=LOC103496425 PE=4 SV=1)

HSP 1 Score: 150 bits (379), Expect = 4.84e-46
Identity = 71/73 (97.26%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY 60
          MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITL+DY
Sbjct: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60

Query: 61 EVHDGMGLELYYN 73
          E+HDGMGLELYYN
Sbjct: 61 EIHDGMGLELYYN 73

[Close]
BLAST of Cp4.1LG01g24320 vs. TAIR 10
Match: AT5G42300.1 (ubiquitin-like protein 5 )

HSP 1 Score: 149.8 bits (377), Expect = 8.3e-37
Identity = 70/73 (95.89%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY 60
          MIEVVLNDRLGKKVRVKCN+DDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITL+DY
Sbjct: 1  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60

Query: 61 EVHDGMGLELYYN 74
          E+HDGMGLELYYN
Sbjct: 61 EIHDGMGLELYYN 73

[Close]
BLAST of Cp4.1LG01g24320 vs. TAIR 10
Match: AT3G45180.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 145.2 bits (365), Expect = 2.1e-35
Identity = 68/73 (93.15%), Postives = 71/73 (97.26%), Query Frame = 0 

Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY 60
          MIEVVLNDRLGKKVRVKCNE+DTIGDLKKLVAAQTGTR EKIRIQKWYNIYKDHI L+DY
Sbjct: 1  MIEVVLNDRLGKKVRVKCNEEDTIGDLKKLVAAQTGTRPEKIRIQKWYNIYKDHIPLKDY 60

Query: 61 EVHDGMGLELYYN 74
          E+HDGMGLELYYN
Sbjct: 61 EIHDGMGLELYYN 73

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g24320 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FGZ91.2e-3595.89Ubiquitin-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=UBL5 PE=3 SV=1[more]
Q3T0Z35.3e-2879.17Ubiquitin-like protein 5 OS=Bos taurus OX=9913 GN=UBL5 PE=3 SV=1[more]
Q9BZL15.3e-2879.17Ubiquitin-like protein 5 OS=Homo sapiens OX=9606 GN=UBL5 PE=1 SV=1[more]
Q6EGX75.3e-2879.17Ubiquitin-like protein 5 OS=Mesocricetus auratus OX=10036 GN=UBL5 PE=3 SV=1[more]
Q9EPV85.3e-2879.17Ubiquitin-like protein 5 OS=Mus musculus OX=10090 GN=Ubl5 PE=1 SV=1[more]
BLAST of Cp4.1LG01g24320 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022922324.12.45e-46100.00ubiquitin-like protein 5 [Cucurbita moschata] >XP_022922332.1 ubiquitin-like pro... [more]
XP_008785280.19.99e-4697.26ubiquitin-like protein 5 [Phoenix dactylifera][more]
XP_017249268.19.99e-4697.26PREDICTED: ubiquitin-like protein 5 [Daucus carota subsp. sativus] >XP_017249269... [more]
XP_002863802.19.99e-4697.26ubiquitin-like protein 5 [Arabidopsis lyrata subsp. lyrata] >XP_006281412.1 ubiq... [more]
KAF8706523.11.42e-4598.63hypothetical protein HU200_030800 [Digitaria exilis] >KAF8707119.1 hypothetical ... [more]
BLAST of Cp4.1LG01g24320 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JQA21.19e-46100.00ubiquitin-like protein 5 OS=Cucurbita maxima OX=3661 GN=LOC111487346 PE=4 SV=1[more]
A0A6J1E2Y41.19e-46100.00ubiquitin-like protein 5 OS=Cucurbita moschata OX=3662 GN=LOC111430336 PE=4 SV=1[more]
A0A6J1I1R24.84e-4697.26ubiquitin-like protein 5 OS=Cucurbita maxima OX=3661 GN=LOC111468647 PE=4 SV=1[more]
A0A398AR324.84e-4697.26Ubiquitin-like domain-containing protein OS=Brassica campestris OX=3711 GN=BRAA0... [more]
A0A1S3C3F94.84e-4697.26ubiquitin-like protein 5 OS=Cucumis melo OX=3656 GN=LOC103496425 PE=4 SV=1[more]
BLAST of Cp4.1LG01g24320 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G42300.18.3e-3795.89ubiquitin-like protein 5 [more]
AT3G45180.12.1e-3593.15Ubiquitin-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.20.90coord: 1..73
e-value: 2.4E-29
score: 103.1
NoneNo IPR availablePANTHERPTHR13042:SF13UBIQUITIN-LIKE PROTEIN 5coord: 1..73
NoneNo IPR availableCDDcd01791Ubl_UBL5coord: 1..71
e-value: 5.85941E-48
score: 143.998
IPR000626Ubiquitin-like domainPFAMPF00240ubiquitincoord: 11..70
e-value: 1.0E-6
score: 28.4
IPR000626Ubiquitin-like domainPROSITEPS50053UBIQUITIN_2coord: 2..73
score: 10.070333
IPR039732Ubiquitin-like modifier Hub1/Ubl5PANTHERPTHR13042UBIQUITIN-LIKE PROTEIN 5coord: 1..73
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 1..73

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g24320.1Cp4.1LG01g24320.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006464 cellular protein modification process
biological_process GO:0000398 mRNA splicing, via spliceosome
cellular_component GO:0005829 cytosol
cellular_component GO:0005634 nucleus
molecular_function GO:0005515 protein binding
molecular_function GO:0031386 protein tag