Cp4.1LG01g23790 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTAATCAACAATTTGACTGAAATTTAATGCAACTTTGTTCATTTATATCTGGAAATTTTAAATGGGTCTTCAATCTTAACAAGTTATGGAAAATAATTTACAGAAAAAAGTATTGTTTCATCATACAACTCAATTGTTTACTGTATAGATAAAGAAAATTGCAGAACCAGATCTTCCTGTTTTTGCTTTTCACTTTTTTTACTCTTGTACCCGATCTTCTTTTTCTCTGGTTTGAAATTCAAATTTGGAACCCCAAGCAAGCATTTCTTGAGCTTGGATTCTTTCTTGCAGTTGGAGCTTCCATGGCGGATTCAACTTGCATCATGCAGCACCCTTTCTCTTATACTTCTGGCTTTCCCAATGAATCCATGGAGGTCGGTCAGTCAGTCACTCAGTTAATTTTGTGCATTTTGTTTGAATTCGATTCGATTTCGATCGTTTCATCTCTGTTTTTCTCTGTTTCTTATAGGGTAATCGTCCGATTCATGGTCTTGTTCAATCGGTCTCCTTCGGGAGGTTCATGTCGGAGTCATTAGATTGGGAGAAATGGTCCACTTTTTCCCACAATCGTTATGTGGAGGAGGCCGAGAAGTTCGCTCGTCCTGGATCTGTTGCGCAGAAGAAAGCTTTCTTTGAAGCTCATTACAAGAACCTTGCTGCTCAGCGAGCTGCTGCTGCTGCTGCTGCTGCTGCGAAAGCCGCCGAAGAAACTGACACAAAACAGAATGTTGATGATGTTGAGCATCAAGAGGTTGTGGCTGCAACTGAAACTGCACAACATTTTGCTACCAATGACAATGGCAATGGCTGCGGCGACCCTTCTGACCTTAAGGAGGAGAAAACTGATAGCAGGGAGGTTGAGGGAGGTGGTTCAGCCATTACCCACCAAGTGAACGAGGGAATTCGTCAAAAGGTTGAGAATTTGGAGCAATCGACCACCATTAGCAAGAAGAAAGTAGCTGCTTCGTCTTCAAAGCTTCCATTTTTCAGTAGATCATCTGCGATCCCACCTACTACACCAGCCCATCCAATGGCTCCAGCTTCCTCTCTCAACAATGCCACTCCAAAAAGGAAATCTACTCCTAAATCTCTTAGGATGGCTAACTTTACACCCATTCGAGAGCTCAACAAGTTAACTTCAACTGTGATGAGAAAGATTGAACGTTCAAGAGTTGGGTCCAGTTCTTCAAAACCAGCTAAAGATTGCTCAACTCCTCTTAGGACCCCGGATATGGTTGCCACACTTTTCGTCTATGAATTTATCTTCTGAATATGGGGATTTTGTTCTAAATCTTTCTGTAATATTTGGTTATCTGCAGGCATTGAAGAATGAGTACCAAAACCATCCTTCTGCTACTCCCTGCTCAGAAACGAAGAGGTTGCTTTTCTCATGAATCTGCAATAACTGAAGTGTCATCTTATAGTATTCATTTTGTTTGGAGATAGCTGATCAACATTCTTGTGTTAATAACTGCAGAAACAAACTGTACTCCCCATTTTCATTCTCCACTTTCAGCTTGAGAACCGATGAAAGAGCAGCGAGACGAAAGGAGGCAAGCTTTTGCTGCATACTTCTCATGTACCTTAAACTCTGTCCCTTCAAGTGCTAATTTTGGTTGCTTGTTTCTTCTTAATACCTACAGAAACTTGAAGAGAAGTTCAACAAAAACGAGTCACAGAAAAAGGTGCAACTTCAAACAAAACTAAAGGTATCTTATTTACAGTTAGAAACTACGAAGCTTCACACTAGTATGATATTGTCCACTTTGAGCATAAGCTCTCGTGACATTACTTTTAGTTTTTCCAAAAAGTCTCGTATCAATGGAAATGTATTCCTTACTTGCTGACGTGGGACTCCTTCCCAACAATCCTCAACATTTACTGCAAGTCATGACTCAACGGACTAATATTCCTGCAGGAGAAAGCCGAAACAGAGATAACAAAATTGCGTCAAAGCTTCTGCTTCAAAGCCAGGCCACTGCCGAGCTTTTACAAGGAGCGAAAAGCACATAAAAACGAGGTAAATCCCATGTGCTAATAGCCTAATACAACGTGCCATGAATTGGTATAAATACTTCTGTCCCTTTGTTTCTTAGGAGGTTCCCAAGCCTCATCCTCCATCACCAAAACTAGGAAGAAACTCCAACTCCCAAACTGGAGAAGCTACGATGGCCCATTCTTGCCATAAGCCTCCCGCTAAGAGCAGCAGAAGCATGAATAAGAATGTGCAGGGAAAGGCTCGTTCTACGTCATTACAAACTTTAATGTCTGCTCACGAGAATATATCTCCTAACATTCAGCAGTGAATGTCAAGCTGCAGAAGCCTTCTCAATATTTTTCAGTCCATTTATTCATGAGGTTACCAGATCTTGACATCCTCTAAACCACAGTGGATCCATTTTGTGGTATATCTGTCAATTTTTATGTAACAAAGCCTTGTTAAAAATATCAGTATATGTAGAGAACAATGATTTGATTGCTATGAAGATATCATTTATTCATCAGAATTCAACAAAGAGTTACAACAGAAGTTGTCAATTGGTATCCAAAGACAGAGTTAGATTACAAAGTGAAACCATTATTCATATCCACATTGATAAAAGCACATTAAAGCCATGAATGAAGGGTGTCTTTTACTTTTATCTGCCTTGTTCTCTGTTAGATTGCTGGTCTTTCTTCTACCAAACACCAAATATCACCTCCCTCCATGGCTTCGTCCACGACGAACTCAACTTCACAATAACTCATGTCATCGTCATCATCCACATGACGACGAATATCTTCGACCCTTGATTCGAAATCTGTTACTTTCTGCGTCTGATCATCATCATCGTCGTCGATGAAGCTGGGGCATTCATCAAAGGGAACCACCAGCGAGCAGTCATTGAGGAGATGGTGCGCCTTGAACTTATTAGATCCCTTAGCTTTATCCTTGGCCTTTTGAACTGGGTGTAGCCTGCAGCCAGAGCATCGGGGCTTGCCACATTTCCCAGTGAACTTGGAGTGATTGGTAGGTTTGGATGAAACCTTTGTGAAAAGGCCAGCAGTAGGAGGGAAATCGAGTTCGTTAACGAACCGAGTTTTGGGTCTTGGGTTCCATGGGGATGGGATGATCCGGTAGGTTCTTACCATGCCATGTTGGCGACCTTCCCTCTTCATTTTGGACTGCTAAAATTGAGCTGAGGAAAGAAAGGTTTGAAGGAAAGAAGAGGAATGGTTTGGACTTATATAAATTTTGGTCAAGGAAAGATACTTGGGAGGCAAGGACTTTGATTGCGACCCACTCTAAATAGCGCGTCGACCAAGCCCTTGATAGTTGACATCTCAACTTCTTTTTGTATATATTTTATGTAAACAAAATGAAA TGTAATCAACAATTTGACTGAAATTTAATGCAACTTTGTTCATTTATATCTGGAAATTTTAAATGGGTCTTCAATCTTAACAAGTTATGGAAAATAATTTACAGAAAAAAGTATTGTTTCATCATACAACTCAATTGTTTACTGTATAGATAAAGAAAATTGCAGAACCAGATCTTCCTGTTTTTGCTTTTCACTTTTTTTACTCTTGTACCCGATCTTCTTTTTCTCTGGTTTGAAATTCAAATTTGGAACCCCAAGCAAGCATTTCTTGAGCTTGGATTCTTTCTTGCAGTTGGAGCTTCCATGGCGGATTCAACTTGCATCATGCAGCACCCTTTCTCTTATACTTCTGGCTTTCCCAATGAATCCATGGAGGGTAATCGTCCGATTCATGGTCTTGTTCAATCGGTCTCCTTCGGGAGGTTCATGTCGGAGTCATTAGATTGGGAGAAATGGTCCACTTTTTCCCACAATCGTTATGTGGAGGAGGCCGAGAAGTTCGCTCGTCCTGGATCTGTTGCGCAGAAGAAAGCTTTCTTTGAAGCTCATTACAAGAACCTTGCTGCTCAGCGAGCTGCTGCTGCTGCTGCTGCTGCTGCGAAAGCCGCCGAAGAAACTGACACAAAACAGAATGTTGATGATGTTGAGCATCAAGAGGTTGTGGCTGCAACTGAAACTGCACAACATTTTGCTACCAATGACAATGGCAATGGCTGCGGCGACCCTTCTGACCTTAAGGAGGAGAAAACTGATAGCAGGGAGGTTGAGGGAGGTGGTTCAGCCATTACCCACCAAGTGAACGAGGGAATTCGTCAAAAGGTTGAGAATTTGGAGCAATCGACCACCATTAGCAAGAAGAAAGTAGCTGCTTCGTCTTCAAAGCTTCCATTTTTCAGTAGATCATCTGCGATCCCACCTACTACACCAGCCCATCCAATGGCTCCAGCTTCCTCTCTCAACAATGCCACTCCAAAAAGGAAATCTACTCCTAAATCTCTTAGGATGGCTAACTTTACACCCATTCGAGAGCTCAACAAGTTAACTTCAACTGTGATGAGAAAGATTGAACGTTCAAGAGTTGGGTCCAGTTCTTCAAAACCAGCTAAAGATTGCTCAACTCCTCTTAGGACCCCGGATATGGCATTGAAGAATGAGTACCAAAACCATCCTTCTGCTACTCCCTGCTCAGAAACGAAGAGAAACAAACTGTACTCCCCATTTTCATTCTCCACTTTCAGCTTGAGAACCGATGAAAGAGCAGCGAGACGAAAGGAGGCAAGCTTTTGCTGCATACTTCTCATGCCACTGCCGAGCTTTTACAAGGAGCGAAAAGCACATAAAAACGAGGAGGTTCCCAAGCCTCATCCTCCATCACCAAAACTAGGAAGAAACTCCAACTCCCAAACTGGAGAAGCTACGATGGCCCATTCTTGCCATAAGCCTCCCGCTAAGAGCAGCAGAAGCATGAATAAGAATGTGCAGGGAAAGGCTCGTTCTACGTCATTACAAACTTTAATGTCTGCTCACGAGAATATATCTCCTAACATTCAGCAGTGAATGTCAAGCTGCAGAAGCCTTCTCAATATTTTTCAGTCCATTTATTCATGAGGTTACCAGATCTTGACATCCTCTAAACCACAGTGGATCCATTTTGTGGTATATCTGTCAATTTTTATGTAACAAAGCCTTGTTAAAAATATCAGTATATGTAGAGAACAATGATTTGATTGCTATGAAGATATCATTTATTCATCAGAATTCAACAAAGAGTTACAACAGAAGTTGTCAATTGGTATCCAAAGACAGAGTTAGATTACAAAGTGAAACCATTATTCATATCCACATTGATAAAAGCACATTAAAGCCATGAATGAAGGGTGTCTTTTACTTTTATCTGCCTTGTTCTCTGTTAGATTGCTGGTCTTTCTTCTACCAAACACCAAATATCACCTCCCTCCATGGCTTCGTCCACGACGAACTCAACTTCACAATAACTCATGTCATCGTCATCATCCACATGACGACGAATATCTTCGACCCTTGATTCGAAATCTGTTACTTTCTGCGTCTGATCATCATCATCGTCGTCGATGAAGCTGGGGCATTCATCAAAGGGAACCACCAGCGAGCAGTCATTGAGGAGATGGTGCGCCTTGAACTTATTAGATCCCTTAGCTTTATCCTTGGCCTTTTGAACTGGGTGTAGCCTGCAGCCAGAGCATCGGGGCTTGCCACATTTCCCAGTGAACTTGGAGTGATTGGTAGGTTTGGATGAAACCTTTGTGAAAAGGCCAGCAGTAGGAGGGAAATCGAGTTCGTTAACGAACCGAGTTTTGGGTCTTGGGTTCCATGGGGATGGGATGATCCGGTAGGTTCTTACCATGCCATGTTGGCGACCTTCCCTCTTCATTTTGGACTGCTAAAATTGAGCTGAGGAAAGAAAGGTTTGAAGGAAAGAAGAGGAATGGTTTGGACTTATATAAATTTTGGTCAAGGAAAGATACTTGGGAGGCAAGGACTTTGATTGCGACCCACTCTAAATAGCGCGTCGACCAAGCCCTTGATAGTTGACATCTCAACTTCTTTTTGTATATATTTTATGTAAACAAAATGAAA ATGGCGGATTCAACTTGCATCATGCAGCACCCTTTCTCTTATACTTCTGGCTTTCCCAATGAATCCATGGAGGGTAATCGTCCGATTCATGGTCTTGTTCAATCGGTCTCCTTCGGGAGGTTCATGTCGGAGTCATTAGATTGGGAGAAATGGTCCACTTTTTCCCACAATCGTTATGTGGAGGAGGCCGAGAAGTTCGCTCGTCCTGGATCTGTTGCGCAGAAGAAAGCTTTCTTTGAAGCTCATTACAAGAACCTTGCTGCTCAGCGAGCTGCTGCTGCTGCTGCTGCTGCTGCGAAAGCCGCCGAAGAAACTGACACAAAACAGAATGTTGATGATGTTGAGCATCAAGAGGTTGTGGCTGCAACTGAAACTGCACAACATTTTGCTACCAATGACAATGGCAATGGCTGCGGCGACCCTTCTGACCTTAAGGAGGAGAAAACTGATAGCAGGGAGGTTGAGGGAGGTGGTTCAGCCATTACCCACCAAGTGAACGAGGGAATTCGTCAAAAGGTTGAGAATTTGGAGCAATCGACCACCATTAGCAAGAAGAAAGTAGCTGCTTCGTCTTCAAAGCTTCCATTTTTCAGTAGATCATCTGCGATCCCACCTACTACACCAGCCCATCCAATGGCTCCAGCTTCCTCTCTCAACAATGCCACTCCAAAAAGGAAATCTACTCCTAAATCTCTTAGGATGGCTAACTTTACACCCATTCGAGAGCTCAACAAGTTAACTTCAACTGTGATGAGAAAGATTGAACGTTCAAGAGTTGGGTCCAGTTCTTCAAAACCAGCTAAAGATTGCTCAACTCCTCTTAGGACCCCGGATATGGCATTGAAGAATGAGTACCAAAACCATCCTTCTGCTACTCCCTGCTCAGAAACGAAGAGAAACAAACTGTACTCCCCATTTTCATTCTCCACTTTCAGCTTGAGAACCGATGAAAGAGCAGCGAGACGAAAGGAGGCAAGCTTTTGCTGCATACTTCTCATGCCACTGCCGAGCTTTTACAAGGAGCGAAAAGCACATAAAAACGAGGAGGTTCCCAAGCCTCATCCTCCATCACCAAAACTAGGAAGAAACTCCAACTCCCAAACTGGAGAAGCTACGATGGCCCATTCTTGCCATAAGCCTCCCGCTAAGAGCAGCAGAAGCATGAATAAGAATGTGCAGGGAAAGGCTCGTTCTACGTCATTACAAACTTTAATGTCTGCTCACGAGAATATATCTCCTAACATTCAGCAGTGA MADSTCIMQHPFSYTSGFPNESMEGNRPIHGLVQSVSFGRFMSESLDWEKWSTFSHNRYVEEAEKFARPGSVAQKKAFFEAHYKNLAAQRAAAAAAAAAKAAEETDTKQNVDDVEHQEVVAATETAQHFATNDNGNGCGDPSDLKEEKTDSREVEGGGSAITHQVNEGIRQKVENLEQSTTISKKKVAASSSKLPFFSRSSAIPPTTPAHPMAPASSLNNATPKRKSTPKSLRMANFTPIRELNKLTSTVMRKIERSRVGSSSSKPAKDCSTPLRTPDMALKNEYQNHPSATPCSETKRNKLYSPFSFSTFSLRTDERAARRKEASFCCILLMPLPSFYKERKAHKNEEVPKPHPPSPKLGRNSNSQTGEATMAHSCHKPPAKSSRSMNKNVQGKARSTSLQTLMSAHENISPNIQQ Homology
BLAST of Cp4.1LG01g23790 vs. ExPASy Swiss-Prot
Match: Q67Y69 (Protein WVD2-like 7 OS=Arabidopsis thaliana OX=3702 GN=WDL7 PE=2 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 8.5e-06 Identity = 88/352 (25.00%), Postives = 145/352 (41.19%), Query Frame = 0
BLAST of Cp4.1LG01g23790 vs. NCBI nr
Match: KAG7033067.1 (Protein WVD2-like 7 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 775 bits (2002), Expect = 9.39e-282 Identity = 405/422 (95.97%), Postives = 410/422 (97.16%), Query Frame = 0
BLAST of Cp4.1LG01g23790 vs. NCBI nr
Match: XP_023518127.1 (protein WVD2-like 7 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 771 bits (1990), Expect = 1.95e-279 Identity = 411/450 (91.33%), Postives = 411/450 (91.33%), Query Frame = 0
BLAST of Cp4.1LG01g23790 vs. NCBI nr
Match: XP_022954996.1 (protein WVD2-like 7 [Cucurbita moschata] >KAG6602390.1 Protein WVD2-like 4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 746 bits (1927), Expect = 6.91e-270 Identity = 399/450 (88.67%), Postives = 404/450 (89.78%), Query Frame = 0
BLAST of Cp4.1LG01g23790 vs. NCBI nr
Match: XP_022991151.1 (protein WVD2-like 7 [Cucurbita maxima]) HSP 1 Score: 728 bits (1880), Expect = 1.71e-261 Identity = 395/450 (87.78%), Postives = 397/450 (88.22%), Query Frame = 0
BLAST of Cp4.1LG01g23790 vs. NCBI nr
Match: XP_008458859.1 (PREDICTED: protein WVD2-like 7 isoform X1 [Cucumis melo]) HSP 1 Score: 489 bits (1258), Expect = 2.82e-166 Identity = 314/573 (54.80%), Postives = 338/573 (58.99%), Query Frame = 0
BLAST of Cp4.1LG01g23790 vs. ExPASy TrEMBL
Match: A0A6J1GSH3 (protein WVD2-like 7 OS=Cucurbita moschata OX=3662 GN=LOC111457083 PE=3 SV=1) HSP 1 Score: 746 bits (1927), Expect = 3.34e-270 Identity = 399/450 (88.67%), Postives = 404/450 (89.78%), Query Frame = 0
BLAST of Cp4.1LG01g23790 vs. ExPASy TrEMBL
Match: A0A6J1JPY0 (protein WVD2-like 7 OS=Cucurbita maxima OX=3661 GN=LOC111487836 PE=3 SV=1) HSP 1 Score: 728 bits (1880), Expect = 8.26e-262 Identity = 395/450 (87.78%), Postives = 397/450 (88.22%), Query Frame = 0
BLAST of Cp4.1LG01g23790 vs. ExPASy TrEMBL
Match: A0A1S3C8D6 (protein WVD2-like 7 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498138 PE=3 SV=1) HSP 1 Score: 489 bits (1258), Expect = 1.36e-166 Identity = 314/573 (54.80%), Postives = 338/573 (58.99%), Query Frame = 0
BLAST of Cp4.1LG01g23790 vs. ExPASy TrEMBL
Match: A0A5A7T2E2 (Protein WVD2-like 7 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold311G00160 PE=3 SV=1) HSP 1 Score: 488 bits (1255), Expect = 3.88e-166 Identity = 313/573 (54.62%), Postives = 338/573 (58.99%), Query Frame = 0
BLAST of Cp4.1LG01g23790 vs. ExPASy TrEMBL
Match: A0A6J1FMY6 (protein WVD2-like 7 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111445659 PE=3 SV=1) HSP 1 Score: 479 bits (1232), Expect = 7.70e-164 Identity = 294/498 (59.04%), Postives = 331/498 (66.47%), Query Frame = 0
BLAST of Cp4.1LG01g23790 vs. TAIR 10
Match: AT3G01710.2 (TPX2 (targeting protein for Xklp2) protein family ) HSP 1 Score: 132.5 bits (332), Expect = 7.9e-31 Identity = 126/347 (36.31%), Postives = 167/347 (48.13%), Query Frame = 0
BLAST of Cp4.1LG01g23790 vs. TAIR 10
Match: AT3G01710.1 (TPX2 (targeting protein for Xklp2) protein family ) HSP 1 Score: 127.5 bits (319), Expect = 2.5e-29 Identity = 126/350 (36.00%), Postives = 168/350 (48.00%), Query Frame = 0
BLAST of Cp4.1LG01g23790 vs. TAIR 10
Match: AT3G27350.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G40700.1); Has 230 Blast hits to 202 proteins in 35 species: Archae - 0; Bacteria - 3; Metazoa - 77; Fungi - 4; Plants - 130; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). ) HSP 1 Score: 107.1 bits (266), Expect = 3.5e-23 Identity = 48/89 (53.93%), Postives = 65/89 (73.03%), Query Frame = 0
BLAST of Cp4.1LG01g23790 vs. TAIR 10
Match: AT3G27350.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G40700.1). ) HSP 1 Score: 107.1 bits (266), Expect = 3.5e-23 Identity = 48/89 (53.93%), Postives = 65/89 (73.03%), Query Frame = 0
BLAST of Cp4.1LG01g23790 vs. TAIR 10
Match: AT5G40700.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27350.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 106.3 bits (264), Expect = 6.0e-23 Identity = 76/183 (41.53%), Postives = 103/183 (56.28%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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