Cp4.1LG01g23700 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g23700
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Pectate lyase
Location	Cp4.1LG01: 19493905 .. 19497538 (-)
RNA-Seq Expression	Cp4.1LG01g23700
Synteny	Cp4.1LG01g23700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAACCCACCACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTAACCTTTTTCTTTGATTTGTTCTCCAATGGCGGCTTCCTTTTTCTTTTTGCTTCTTTTACCACTCTCTTTCTTCTTCACTGATTCCTCCTTGGCTGAAGTTCAAGATCCTCATCTTGTCGTTCAAGAAGTTCAAAGGTATACATGTTTTTGTTTTTCATTTGTTGTTTGTGGTTCAGTTTTGAGGAAGATTTCGACCCTTTTAACAAAATGTGGTTTCTTCTAACATGTTTTTAGTGTTTCAAATACAAAAGTTGTTTATATGTGAATCTTCATTTCTTACTCTTACTCGTTATTCACTCATTTAAACATTACAATCACCAAACTCCACAATAGTATGATACTATTCACTTTAAACATTTTAATAGTTTTACTTTTGATTTTTTCAAAAGCTCTCCAATCTTTATTTATAAACCTATGATCCTCTATTTATAAACCTATGATCCTCTGTAAGAACCCAAACCCATTGTTAGTAGATATGATCCGTTTTGACCCGTCACGTGTTGTCGTCAGACTCACGATTTTAAAACATGTTTGTTAGGAAGAGATTTCCACACCTTTATAAGAAATGTTTCGTTCCCCCTTTTTAACCAATGTGAAATCAGAGCTAAACACCGAGCGCTGTGCCAGCGAACACATCCTTATAAGAAATGTTTCGTTCTCCTTTCTAACCAATGTGGGATCAGAGCTAAACACTAAGCGGTGTGCCAGCCAGCACATCCTTATAAGAAATGTTTCGTTCCCCTTTCTAACCAATGTGGGATCAAAGCTAAACATCGAGCGGTGTGCCAGCGAGCAAATCCTTATAAGAAATGTTTCGTTTCCCTGTCTAACCAATGTGGGATCAGAGCTAAACACCGAGCGGTGTGCCAGCGAGGACGCTGGCTCCCCGAGGGGGTGAATTGTGAGATCCCACATCGGTTGGAGAGGAGAACGAAACATTTCTATAAGGGTAGGGAGACTCCCTAACAAACGTTTTAAAATTATAAGACTGACGGCGATACATATGCTAACAGTGAATGATAAGTATATTTCATACCTACAGCTTTAAGATATTGTCGTTTTTGGGTTTTCCCTTGGACTTTCCCAAGACTTTAATACCTGTGAAAGGTTTCCACACCCTTGCCGGTGTTTGTTCTCCTCTCCAACTAACGTGGGACACACAAGCACACTCATAAGGTTCTCATTAATAATGTGTCTTATTTATAAATGGACAGGAGCATCAATGAATCAAGAACAAGAAGAAACTTGGGATATTTGTCATGTAGAACAGGAAACCCAATAGACGACTGCTGGAGATGCGACCCCAATTGGGAAACCAACCGAAAGCGCTTAGCCGACTGCGCCATTGGGTTCGGCAAAAACGCCATCGGCGGCAGAAACGGCCGCTTCTACGTCGTCACAGACGCCGGCGACGACGACCCTCTCAACCCCAGACCAGGAACCCTCCGCCACGCCGTCATCCAAAACGAGCCCTTATGGATCATCTTCAAGCGTGACATGGTAATCCAACTCAGACAAGAACTGGTGATGAACTCGTTCAAGACCATCGACGGGCGTGGGGCCAGCGTGCATGTGGCAGGTGGGCCATGCATCACCATCCACTACGCCACAAACATCATAATCCACGGCATCCACATACATGACTGTAAGAGAGGGGGGAATGGTAACATACGGGACTCCCCACAGCACTCCGGGTGGTGGACTATATCGGACGGTGATGGAGTGTCGATCTTTGGTGGGAAGCATATTTGGGTTGACCATTGTTCCTTGTCTAATTGTAACGATGGGTTGATCGACGCGATTCATGGTTCGACGGCGATCACGATTTCGAATAATTACATGACTCATCATGATAAAGTGATGCTGTTGGGACATAGTGACTCTTACACTCAAGACAAGAATATGCAAGTTACTATTGCCTTCAACCATTTTGGTGAGGGCCTTGTTCAACGAATGCCGAGGTAAATCAAATTAATTTGCATTCTATTTGAGCTTTTCACACCCTTTTTAAAGAATGCTTCGTTCGTTTCCTCTCCAACCATAGTATCTTACAATCCACTCTCTTAGAGTCTCCTCACATACCATCCAGTGGCCGGCTTTGATACCATTCGTAACAGTCCAAACTCACTGTTAGAAGACATTGTCTTAAGCTATAAGCTTGAACGGCCACAAATGGTATCAGAGCTAGACACCGAGTCGTGTGAACGCTGGATCCCGAAGAGGGTTCACTGTTAGAAGACATTGTCCTAAGCTATAAGCTTGAACGGCCACAAATGGTATCAGAGCCAGACACCGAGTCGTGTGAACGCTGGATCCCGAAGAGGGTGAATGATTGGATCTCACATTTATTGTCCTCTTTGGGCTTTTCCTTTCAGGCTCCCCTCAAAGCTTTAAAACGGCCTGTTAGAGGTAGTTTGAAGGGTGGTTTGTTCTCCTCCCCCAACCAATGTGGGACATCACAATCTACCCCCTTCGGGGCCCAGCGTCCTCGCGGGCACTCTTTCCTTCCTATAATCGATGTGGGACCGCCCCCAAATCCACCCCCTTTGGGGCCAACGTCTTCACTGGCACACCGTCTCATGTCTACTCCTTTGGGGAAGAGCGAGAAGGTTGACACATCGTCTAGTGTCTGGCTCTGATACCATTTGTAACGACACAGGCCACAGCTAGCAAAATATTATCCTCTTTGGGCTTTCCCTTTCGGACTCCCCTTAATGCTTTAAAAGGCTCTGTTAGAGTAAGGTTTCTACATTCTTATAAATGTGGGACAACACAAAACCTCCTTCAGAGCCATAATTTTGCTAGGGCAAGGTTCCACATATAAGGTTCCACGTGTAAGGTTGCATAATTCAATTCAACTTTAAAAGCATCAAAATTTTGATGTGGGTATTTTTGTTTCCATCTAAAAATGGTGTCTTTGAATTGTGGGAATGATTTTGCAGATGCAGGCATGGGTATTTCCATGTGGTGAACAACGATTACACCCACTGGGAAATGTACGCAATTGGAGGGAGTGCTTCACCGACAATATACAGTCAAGGCAACAGATTTTTGGCGCCGGACGTCCGATACCGAAAGGAGGTGACAAAGCACGAGGACGCACCGGAGAGTGAGTGGCGTCACTGGAACTGGCGGTCAGAGGGCGACATGATGTTGAACGGCGCCTATTTTCGCCAGTCCGGCGCCGGCGCTGCGTCCAGCTACGCAAGAGCTTACAGTCTGAGCGCTAGACCCTCCTCCCTCGTTGGTTCTATCACGGTCACAGCCGGCGCCCTCAACTGCCGCAGAGGCTCCCGTTGCTAGTTAGTATTAACAGGAAAGGTCATATAACTGCAAGTACCGAAAATGAAGGAAGAAAGGGCCTTTGTTTATGAAGAGCAGTTGAATTATTATTAGTTTATGAAGATCTGAATTTTTGTGTTGGTTTAATTTCCATCCAACTTTTTGGTTTGCCAAAGCAGAGTATTTGGTTAAACTCGGATGTTTGTGATTGTGAAAGGTAATGGGAAAAGTATGAGGAATTATGTTTTTGAGTCACCAATCACGCTCACAAAAACGGAATGAGTACTATATATTTTACCCGTC

mRNA sequence

TAAACCCACCACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTAACCTTTTTCTTTGATTTGTTCTCCAATGGCGGCTTCCTTTTTCTTTTTGCTTCTTTTACCACTCTCTTTCTTCTTCACTGATTCCTCCTTGGCTGAAGTTCAAGATCCTCATCTTGTCGTTCAAGAAGTTCAAAGAACAGGAAACCCAATAGACGACTGCTGGAGATGCGACCCCAATTGGGAAACCAACCGAAAGCGCTTAGCCGACTGCGCCATTGGGTTCGGCAAAAACGCCATCGGCGGCAGAAACGGCCGCTTCTACGTCGTCACAGACGCCGGCGACGACGACCCTCTCAACCCCAGACCAGGAACCCTCCGCCACGCCGTCATCCAAAACGAGCCCTTATGGATCATCTTCAAGCGTGACATGGTAATCCAACTCAGACAAGAACTGGTGATGAACTCGTTCAAGACCATCGACGGGCGTGGGGCCAGCGTGCATGTGGCAGGTGGGCCATGCATCACCATCCACTACGCCACAAACATCATAATCCACGGCATCCACATACATGACTGTAAGAGAGGGGGGAATGGTAACATACGGGACTCCCCACAGCACTCCGGGTGGTGGACTATATCGGACGGTGATGGAGTGTCGATCTTTGGTGGGAAGCATATTTGGGTTGACCATTGTTCCTTGTCTAATTGTAACGATGGGTTGATCGACGCGATTCATGGTTCGACGGCGATCACGATTTCGAATAATTACATGACTCATCATGATAAAGTGATGCTATGCAGGCATGGGTATTTCCATGTGGTGAACAACGATTACACCCACTGGGAAATGTACGCAATTGGAGGGAGTGCTTCACCGACAATATACAGTCAAGGCAACAGATTTTTGGCGCCGGACGTCCGATACCGAAAGGAGGTGACAAAGCACGAGGACGCACCGGAGAGTGAGTGGCGTCACTGGAACTGGCGGTCAGAGGGCGACATGATGTTGAACGGCGCCTATTTTCGCCAGTCCGGCGCCGGCGCTGCGTCCAGCTACGCAAGAGCTTACAGTCTGAGCGCTAGACCCTCCTCCCTCGTTGGTTCTATCACGGTCACAGCCGGCGCCCTCAACTGCCGCAGAGGCTCCCGTTGCTAGTTAGTATTAACAGGAAAGGTCATATAACTGCAAGTACCGAAAATGAAGGAAGAAAGGGCCTTTGTTTATGAAGAGCAGTTGAATTATTATTAGTTTATGAAGATCTGAATTTTTGTGTTGGTTTAATTTCCATCCAACTTTTTGGTTTGCCAAAGCAGAGTATTTGGTTAAACTCGGATGTTTGTGATTGTGAAAGGTAATGGGAAAAGTATGAGGAATTATGTTTTTGAGTCACCAATCACGCTCACAAAAACGGAATGAGTACTATATATTTTACCCGTC

Coding sequence (CDS)

ATGGCGGCTTCCTTTTTCTTTTTGCTTCTTTTACCACTCTCTTTCTTCTTCACTGATTCCTCCTTGGCTGAAGTTCAAGATCCTCATCTTGTCGTTCAAGAAGTTCAAAGAACAGGAAACCCAATAGACGACTGCTGGAGATGCGACCCCAATTGGGAAACCAACCGAAAGCGCTTAGCCGACTGCGCCATTGGGTTCGGCAAAAACGCCATCGGCGGCAGAAACGGCCGCTTCTACGTCGTCACAGACGCCGGCGACGACGACCCTCTCAACCCCAGACCAGGAACCCTCCGCCACGCCGTCATCCAAAACGAGCCCTTATGGATCATCTTCAAGCGTGACATGGTAATCCAACTCAGACAAGAACTGGTGATGAACTCGTTCAAGACCATCGACGGGCGTGGGGCCAGCGTGCATGTGGCAGGTGGGCCATGCATCACCATCCACTACGCCACAAACATCATAATCCACGGCATCCACATACATGACTGTAAGAGAGGGGGGAATGGTAACATACGGGACTCCCCACAGCACTCCGGGTGGTGGACTATATCGGACGGTGATGGAGTGTCGATCTTTGGTGGGAAGCATATTTGGGTTGACCATTGTTCCTTGTCTAATTGTAACGATGGGTTGATCGACGCGATTCATGGTTCGACGGCGATCACGATTTCGAATAATTACATGACTCATCATGATAAAGTGATGCTATGCAGGCATGGGTATTTCCATGTGGTGAACAACGATTACACCCACTGGGAAATGTACGCAATTGGAGGGAGTGCTTCACCGACAATATACAGTCAAGGCAACAGATTTTTGGCGCCGGACGTCCGATACCGAAAGGAGGTGACAAAGCACGAGGACGCACCGGAGAGTGAGTGGCGTCACTGGAACTGGCGGTCAGAGGGCGACATGATGTTGAACGGCGCCTATTTTCGCCAGTCCGGCGCCGGCGCTGCGTCCAGCTACGCAAGAGCTTACAGTCTGAGCGCTAGACCCTCCTCCCTCGTTGGTTCTATCACGGTCACAGCCGGCGCCCTCAACTGCCGCAGAGGCTCCCGTTGCTAG

Protein sequence

MAASFFFLLLLPLSFFFTDSSLAEVQDPHLVVQEVQRTGNPIDDCWRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNEPLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCKRGGNGNIRDSPQHSGWWTISDGDGVSIFGGKHIWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHDKVMLCRHGYFHVVNNDYTHWEMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYFRQSGAGAASSYARAYSLSARPSSLVGSITVTAGALNCRRGSRC

Homology

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BLAST of Cp4.1LG01g23700 vs. ExPASy Swiss-Prot
Match: Q9LTZ0 (Putative pectate lyase 11 OS=Arabidopsis thaliana OX=3702 GN=At3g27400 PE=3 SV=2)

HSP 1 Score: 577.8 bits (1488), Expect = 8.5e-164
Identity = 279/403 (69.23%), Postives = 312/403 (77.42%), Query Frame = 0


Query: 2   AASFFFLLLLPLSFFFTDSSLAEVQDPHLVVQEVQ----------------RTGNPIDDC 61
           A +F  LL +  +  F+ S    VQDP+LVV +V                 RTGNPIDDC
Sbjct: 10  AYAFLLLLTIGNTLAFSSSLPDHVQDPNLVVDDVNRSVFNASRRSLAYLSCRTGNPIDDC 69

Query: 62  WRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNE 121
           WRCDPNWETNR+RLADCAIGFGKNAIGGR GR YVVTD  +DDP+NPRPGTLR+AV Q E
Sbjct: 70  WRCDPNWETNRQRLADCAIGFGKNAIGGRKGRIYVVTDPANDDPVNPRPGTLRYAVTQEE 129

Query: 122 PLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCK 181
           PLWIIFKRDMVI+L++EL++ SFKTIDGRG+SVH+  GPC+ IHYATNIIIHGI+IHDCK
Sbjct: 130 PLWIIFKRDMVIRLKKELIITSFKTIDGRGSSVHITDGPCLKIHYATNIIIHGINIHDCK 189

Query: 182 RGGNGNIRDSPQHSGWWTISDGDGVSIFGGKHIWVDHCSLSNCNDGLIDAIHGSTAITIS 241
            G  G I+D P H+GWW  SDGD V+IFGGKH+W+DHCSLSNC+DGLIDAIHGSTAITIS
Sbjct: 190 PGSGGMIKDGPHHTGWWMQSDGDAVAIFGGKHVWIDHCSLSNCDDGLIDAIHGSTAITIS 249

Query: 242 NNYMTHHDKVML--------------------------------CRHGYFHVVNNDYTHW 301
           NN+MTHHDKVML                                CRHGYFHVVNNDYTHW
Sbjct: 250 NNHMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW 309

Query: 302 EMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYF 357
           EMYAIGGSASPTIYSQGNRFLAP+ R+ KEVTKHEDAPES+WR WNWRSEGDM+LNGAYF
Sbjct: 310 EMYAIGGSASPTIYSQGNRFLAPNTRFNKEVTKHEDAPESKWRDWNWRSEGDMLLNGAYF 369

[Close]

BLAST of Cp4.1LG01g23700 vs. ExPASy Swiss-Prot
Match: O24554 (Pectate lyase OS=Zinnia violacea OX=34245 PE=1 SV=1)

HSP 1 Score: 574.3 bits (1479), Expect = 9.4e-163
Identity = 278/397 (70.03%), Postives = 311/397 (78.34%), Query Frame = 0


Query: 10  LLPLSFFFTDSSLAE---VQDPHLVVQEVQR---------------TGNPIDDCWRCDPN 69
           +LPL  F +  ++A     + PH +V EV +               TGNPIDDCWRCDPN
Sbjct: 5   ILPLILFISSLAIASSSPSRTPHAIVNEVHKSINASRRNLGYLSCGTGNPIDDCWRCDPN 64

Query: 70  WETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNEPLWIIF 129
           W  NR+RLADCAIGFGKNA+GGRNGR YVVTD G+DDP+NP PGTLR+AVIQ+EPLWIIF
Sbjct: 65  WANNRQRLADCAIGFGKNAMGGRNGRIYVVTDPGNDDPVNPVPGTLRYAVIQDEPLWIIF 124

Query: 130 KRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCKRGGNGN 189
           KRDMVIQLRQELVMNS KTIDGRG +VH+  GPCITIHYA+NIIIHGIHIHDCK+ GNGN
Sbjct: 125 KRDMVIQLRQELVMNSHKTIDGRGVNVHIGNGPCITIHYASNIIIHGIHIHDCKQAGNGN 184

Query: 190 IRDSPQHSGWWTISDGDGVSIFGGKHIWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTH 249
           IR+SP HSGWWT SDGDG+SIF  K IW+DH SLSNC+DGLIDAIHGSTAITISNNYMTH
Sbjct: 185 IRNSPHHSGWWTQSDGDGISIFASKDIWIDHNSLSNCHDGLIDAIHGSTAITISNNYMTH 244

Query: 250 HDKVML--------------------------------CRHGYFHVVNNDYTHWEMYAIG 309
           HDKVML                                CRHGYFHVVNNDYTHWEMYAIG
Sbjct: 245 HDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIG 304

Query: 310 GSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYFRQSGAG 357
           GSASPTIYSQGNRFLAP+ R+ KEVTKHE+APESEW++WNWRSEGD+MLNGAYFR+SG  
Sbjct: 305 GSASPTIYSQGNRFLAPNTRFDKEVTKHENAPESEWKNWNWRSEGDLMLNGAYFRESGGR 364

[Close]

BLAST of Cp4.1LG01g23700 vs. ExPASy Swiss-Prot
Match: Q9C5M8 (Probable pectate lyase 18 OS=Arabidopsis thaliana OX=3702 GN=At4g24780 PE=2 SV=2)

HSP 1 Score: 557.8 bits (1436), Expect = 9.1e-158
Identity = 269/400 (67.25%), Postives = 309/400 (77.25%), Query Frame = 0


Query: 7   FLLLLPLSFFFTDSSLAEVQDPHLVVQEVQR------------------TGNPIDDCWRC 66
           FLL  PL   F  S    V DP  VV+EV +                  TGNPIDDCWRC
Sbjct: 15  FLLYAPL---FLSS---PVPDPESVVEEVHKSINASVAGRRKLGYLSCTTGNPIDDCWRC 74

Query: 67  DPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNEPLW 126
           DP+WE +R+RLADCAIGFGKNAIGGR+GR YVVTD+G+D+P++P+PGTLRHAV+Q+EPLW
Sbjct: 75  DPHWEQHRQRLADCAIGFGKNAIGGRDGRIYVVTDSGNDNPVSPKPGTLRHAVVQDEPLW 134

Query: 127 IIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCKRGG 186
           IIF+RDM IQL++EL+MNSFKTIDGRGASVH++GGPCITI Y TNIIIHGIHIHDCK+GG
Sbjct: 135 IIFQRDMTIQLKEELIMNSFKTIDGRGASVHISGGPCITIQYVTNIIIHGIHIHDCKQGG 194

Query: 187 NGNIRDSPQHSGWWTISDGDGVSIFGGKHIWVDHCSLSNCNDGLIDAIHGSTAITISNNY 246
           N  +R SP+H GW TISDGDGVSIFGG H+WVDHCS SNC DGLIDAI GSTAIT+SNN+
Sbjct: 195 NAMVRSSPRHFGWRTISDGDGVSIFGGSHVWVDHCSFSNCEDGLIDAIMGSTAITLSNNH 254

Query: 247 MTHHDKVML--------------------------------CRHGYFHVVNNDYTHWEMY 306
           MTHHDKVML                                CRHGYFHVVNNDYTHWEMY
Sbjct: 255 MTHHDKVMLLGHSDTYSRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMY 314

Query: 307 AIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYFRQS 357
           AIGGSA+PTI SQGNRFLAP++R+ KEVTKHEDAPESEW+ WNWRS GD++LNGA+F  S
Sbjct: 315 AIGGSANPTINSQGNRFLAPNIRFSKEVTKHEDAPESEWKRWNWRSSGDLLLNGAFFTPS 374

[Close]

BLAST of Cp4.1LG01g23700 vs. ExPASy Swiss-Prot
Match: P24396 (Probable pectate lyase P18 OS=Solanum lycopersicum OX=4081 GN=9612 PE=2 SV=1)

HSP 1 Score: 553.9 bits (1426), Expect = 1.3e-156
Identity = 275/404 (68.07%), Postives = 310/404 (76.73%), Query Frame = 0


Query: 4   SFFFLLLLPLSFFFTDSSLAEVQDPHLVVQEVQR-----------------TGNPIDDCW 63
           +F  LLL PL        ++ +QDP LVVQ+V R                 +GNPID   
Sbjct: 7   TFSLLLLAPLLV------ISSIQDPELVVQDVHRSINASLTRRNLGYLSCGSGNPIDRLL 66

Query: 64  RCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNEP 123
              P         + CAIGFGKNAIGG+NGR YVVTD+G+DDP+NP+PGTLRHAVIQ+EP
Sbjct: 67  AMQPQLGKKSPAFSYCAIGFGKNAIGGKNGRIYVVTDSGNDDPVNPKPGTLRHAVIQDEP 126

Query: 124 LWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCKR 183
           LWIIFKRDMVIQL+QELVMNS+KTIDGRGASVH++GGPCITIH+ +NIIIHGI+IHDCK+
Sbjct: 127 LWIIFKRDMVIQLKQELVMNSYKTIDGRGASVHISGGPCITIHHTSNIIIHGINIHDCKQ 186

Query: 184 GGNGNIRDSPQHSGWWTISDGDGVSIFGGKHIWVDHCSLSNCNDGLIDAIHGSTAITISN 243
            GNGNIRDSP HSGWW +SDGDG+SIFGGK+IWVDHCSLSNC+DGLIDAIHGSTAITISN
Sbjct: 187 SGNGNIRDSPNHSGWWDVSDGDGISIFGGKNIWVDHCSLSNCHDGLIDAIHGSTAITISN 246

Query: 244 NYMTHHDKVML--------------------------------CRHGYFHVVNNDYTHWE 303
           NY THHDKVML                                CRHGYFHVVNNDYTHWE
Sbjct: 247 NYFTHHDKVMLLGHSDSFTQDKGMQVTVAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE 306

Query: 304 MYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYFR 357
           MYAIGGSA+PTI SQGNRFLAP+ +YRKEVTKHEDAPES+WR WNWRSEGD+MLNGAYFR
Sbjct: 307 MYAIGGSAAPTINSQGNRFLAPNEKYRKEVTKHEDAPESQWRSWNWRSEGDLMLNGAYFR 366

[Close]

BLAST of Cp4.1LG01g23700 vs. ExPASy Swiss-Prot
Match: Q93Z25 (Probable pectate lyase 22 OS=Arabidopsis thaliana OX=3702 GN=At5g63180 PE=2 SV=1)

HSP 1 Score: 552.0 bits (1421), Expect = 5.0e-156
Identity = 269/402 (66.92%), Postives = 306/402 (76.12%), Query Frame = 0


Query: 6   FFLLLLPLSFFFTDSSLAEVQDPHLVVQEVQR-----------------TGNPIDDCWRC 65
           F L+      F   +S   V DP LVV+EV R                 +GNPIDDCWRC
Sbjct: 31  FALIFFCCILFSALASSLPVSDPELVVEEVHRKINESISRRKLGFFSCGSGNPIDDCWRC 90

Query: 66  DPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNEPLW 125
           D +WE NRKRLADC IGFGKNAIGGR+G  YVVTD G+DDP+NPRPGTLR+AVIQ+EPLW
Sbjct: 91  DKDWEKNRKRLADCGIGFGKNAIGGRDGEIYVVTDPGNDDPVNPRPGTLRYAVIQDEPLW 150

Query: 126 IIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCKRGG 185
           IIFKRDM IQL++EL+MNSFKT+DGRGASVH++GGPCITI Y TNIIIHG+HIHDCK+GG
Sbjct: 151 IIFKRDMTIQLKEELIMNSFKTLDGRGASVHISGGPCITIQYVTNIIIHGLHIHDCKQGG 210

Query: 186 NGNIRDSPQHSGWWTISDGDGVSIFGGKHIWVDHCSLSNCNDGLIDAIHGSTAITISNNY 245
           N  +RDSP+H G+ T+SDGDGVSIFGG H+WVDHCSLSNCNDGLIDAI GSTAITISNNY
Sbjct: 211 NTYVRDSPEHYGYRTVSDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIRGSTAITISNNY 270

Query: 246 MTHHDKVML--------------------------------CRHGYFHVVNNDYTHWEMY 305
           +THH+KVML                                CRHGYFHVVNNDYTHWEMY
Sbjct: 271 LTHHNKVMLLGHSDTYEQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMY 330

Query: 306 AIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYFRQS 357
           AIGGSA+PTI SQGNRFLAPD    KEVTKHEDAPE EWR+WNWRSEGD++LNGA+F  S
Sbjct: 331 AIGGSANPTINSQGNRFLAPDDSSSKEVTKHEDAPEDEWRNWNWRSEGDLLLNGAFFTYS 390

[Close]

BLAST of Cp4.1LG01g23700 vs. NCBI nr
Match: XP_023526071.1 (pectate lyase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 717 bits (1851), Expect = 4.87e-260
Identity = 356/405 (87.90%), Postives = 356/405 (87.90%), Query Frame = 0


Query: 1   MAASFFFLLLLPLSFFFTDSSLAEVQDPHLVVQEVQR-----------------TGNPID 60
           MAASFFFLLLLPLSFFFTDSSLAEVQDPHLVVQEVQR                 TGNPID
Sbjct: 1   MAASFFFLLLLPLSFFFTDSSLAEVQDPHLVVQEVQRSINESRTRRNLGYLSCRTGNPID 60

Query: 61  DCWRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQ 120
           DCWRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQ
Sbjct: 61  DCWRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQ 120

Query: 121 NEPLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHD 180
           NEPLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHD
Sbjct: 121 NEPLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHD 180

Query: 181 CKRGGNGNIRDSPQHSGWWTISDGDGVSIFGGKHIWVDHCSLSNCNDGLIDAIHGSTAIT 240
           CKRGGNGNIRDSPQHSGWWTISDGDGVSIFGGKHIWVDHCSLSNCNDGLIDAIHGSTAIT
Sbjct: 181 CKRGGNGNIRDSPQHSGWWTISDGDGVSIFGGKHIWVDHCSLSNCNDGLIDAIHGSTAIT 240

Query: 241 ISNNYMTHHDKVML--------------------------------CRHGYFHVVNNDYT 300
           ISNNYMTHHDKVML                                CRHGYFHVVNNDYT
Sbjct: 241 ISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYT 300

Query: 301 HWEMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGA 356
           HWEMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGA
Sbjct: 301 HWEMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGA 360

[Close]

BLAST of Cp4.1LG01g23700 vs. NCBI nr
Match: XP_022959813.1 (pectate lyase-like [Cucurbita moschata])

HSP 1 Score: 712 bits (1839), Expect = 2.27e-257
Identity = 354/405 (87.41%), Postives = 355/405 (87.65%), Query Frame = 0


Query: 1   MAASFFFLLLLPLSFFFTDSSLAEVQDPHLVVQEVQR-----------------TGNPID 60
           MAASFFFLLLLPLSFFFTDSSLA VQDPHLVVQEVQR                 TGNPID
Sbjct: 53  MAASFFFLLLLPLSFFFTDSSLASVQDPHLVVQEVQRSINESRTRRNLGYLSCRTGNPID 112

Query: 61  DCWRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQ 120
           DCWRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQ
Sbjct: 113 DCWRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQ 172

Query: 121 NEPLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHD 180
           NEPLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHD
Sbjct: 173 NEPLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHD 232

Query: 181 CKRGGNGNIRDSPQHSGWWTISDGDGVSIFGGKHIWVDHCSLSNCNDGLIDAIHGSTAIT 240
           CKRGGNGNIRDSPQHSGWWTISDGDGVSIFGGK+IWVDHCSLSNCNDGLIDAIHGSTAIT
Sbjct: 233 CKRGGNGNIRDSPQHSGWWTISDGDGVSIFGGKNIWVDHCSLSNCNDGLIDAIHGSTAIT 292

Query: 241 ISNNYMTHHDKVML--------------------------------CRHGYFHVVNNDYT 300
           ISNNYMTHHDKVML                                CRHGYFHVVNNDYT
Sbjct: 293 ISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYT 352

Query: 301 HWEMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGA 356
           HWEMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGA
Sbjct: 353 HWEMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGA 412

[Close]

BLAST of Cp4.1LG01g23700 vs. NCBI nr
Match: KAG6602397.1 (putative pectate lyase 11, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033073.1 putative pectate lyase 11, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 708 bits (1828), Expect = 1.56e-256
Identity = 352/405 (86.91%), Postives = 353/405 (87.16%), Query Frame = 0


Query: 1   MAASFFFLLLLPLSFFFTDSSLAEVQDPHLVVQEVQR-----------------TGNPID 60
           M ASFFFLLLLPLSFFF DSSLA VQDPHLVVQEVQR                 TGNPID
Sbjct: 1   MPASFFFLLLLPLSFFFIDSSLASVQDPHLVVQEVQRSINESRTRRNLGYLSCRTGNPID 60

Query: 61  DCWRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQ 120
           DCWRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQ
Sbjct: 61  DCWRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQ 120

Query: 121 NEPLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHD 180
           NEPLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHD
Sbjct: 121 NEPLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHD 180

Query: 181 CKRGGNGNIRDSPQHSGWWTISDGDGVSIFGGKHIWVDHCSLSNCNDGLIDAIHGSTAIT 240
           CKRGGNGNIRDSPQHSGWWTISDGDGVSIFGGK+IWVDHCSLSNCNDGLIDAIHGSTAIT
Sbjct: 181 CKRGGNGNIRDSPQHSGWWTISDGDGVSIFGGKNIWVDHCSLSNCNDGLIDAIHGSTAIT 240

Query: 241 ISNNYMTHHDKVML--------------------------------CRHGYFHVVNNDYT 300
           ISNNYMTHHDKVML                                CRHGYFHVVNNDYT
Sbjct: 241 ISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYT 300

Query: 301 HWEMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGA 356
           HWEMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGA
Sbjct: 301 HWEMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGA 360

[Close]

BLAST of Cp4.1LG01g23700 vs. NCBI nr
Match: XP_022991156.1 (pectate lyase-like, partial [Cucurbita maxima])

HSP 1 Score: 709 bits (1829), Expect = 2.15e-256
Identity = 351/405 (86.67%), Postives = 355/405 (87.65%), Query Frame = 0


Query: 1   MAASFFFLLLLPLSFFFTDSSLAEVQDPHLVVQEVQR-----------------TGNPID 60
           MAASFFFLLLLPLSFFFTDSSLA VQDPHLVVQ+VQR                 TGNPID
Sbjct: 19  MAASFFFLLLLPLSFFFTDSSLASVQDPHLVVQQVQRSINESRIRRNLGYLSCRTGNPID 78

Query: 61  DCWRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQ 120
           DCWRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFY+VTDAGDDDPLNPRPGTLRHAVIQ
Sbjct: 79  DCWRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYMVTDAGDDDPLNPRPGTLRHAVIQ 138

Query: 121 NEPLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHD 180
           NEPLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHD
Sbjct: 139 NEPLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHD 198

Query: 181 CKRGGNGNIRDSPQHSGWWTISDGDGVSIFGGKHIWVDHCSLSNCNDGLIDAIHGSTAIT 240
           CKRGGNGNIRDSPQHSGWWTISDGDGVSIFGGK+IWVDHCSLSNCNDGLIDAIHGSTAIT
Sbjct: 199 CKRGGNGNIRDSPQHSGWWTISDGDGVSIFGGKNIWVDHCSLSNCNDGLIDAIHGSTAIT 258

Query: 241 ISNNYMTHHDKVML--------------------------------CRHGYFHVVNNDYT 300
           ISNNYMTHHDKVML                                CRHGYFHVVNNDYT
Sbjct: 259 ISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYT 318

Query: 301 HWEMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGA 356
           HWEMYAIGGSASPTIYSQGNRFLAPDVRY+KEVTKHEDAPESEWRHWNWRSEGDMMLNGA
Sbjct: 319 HWEMYAIGGSASPTIYSQGNRFLAPDVRYQKEVTKHEDAPESEWRHWNWRSEGDMMLNGA 378

[Close]

BLAST of Cp4.1LG01g23700 vs. NCBI nr
Match: XP_022134052.1 (pectate lyase-like [Momordica charantia])

HSP 1 Score: 653 bits (1685), Expect = 1.15e-234
Identity = 323/410 (78.78%), Postives = 342/410 (83.41%), Query Frame = 0


Query: 1   MAASFFFLLLLPLSFFFTDSSLAE-------VQDPHLVVQEVQR---------------T 60
           MAAS  FLLL+ LS     ++ A        VQDPH VVQEV+R               T
Sbjct: 1   MAASLCFLLLISLSLLLWSAAPASASSLPNSVQDPHRVVQEVERSINVSRRNLGYFSCGT 60

Query: 61  GNPIDDCWRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLR 120
           GNPIDDCWRCDPNWE+NRKRLADCAIGFGKNA+GGRNGRFYVV+DAGDDD +NPRPGTLR
Sbjct: 61  GNPIDDCWRCDPNWESNRKRLADCAIGFGKNAMGGRNGRFYVVSDAGDDDAVNPRPGTLR 120

Query: 121 HAVIQNEPLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHG 180
           HAVIQNEPLWIIFKRDMVI+L+QELVMNS+KTIDGRGASVHVAGGPCITIHYA+NIIIHG
Sbjct: 121 HAVIQNEPLWIIFKRDMVIRLKQELVMNSYKTIDGRGASVHVAGGPCITIHYASNIIIHG 180

Query: 181 IHIHDCKRGGNGNIRDSPQHSGWWTISDGDGVSIFGGKHIWVDHCSLSNCNDGLIDAIHG 240
           IHIHDCKRGGNGNIRDSPQHSGWWT+SDGDGVSIFGGKHIWVDHCSLSNCNDGLIDAIHG
Sbjct: 181 IHIHDCKRGGNGNIRDSPQHSGWWTVSDGDGVSIFGGKHIWVDHCSLSNCNDGLIDAIHG 240

Query: 241 STAITISNNYMTHHDKVML--------------------------------CRHGYFHVV 300
           STAITISNNYMTHHDKVML                                CRHGYFHVV
Sbjct: 241 STAITISNNYMTHHDKVMLLGHSDSYTQDKDMQVTIAFNHFGEGLVQRMPRCRHGYFHVV 300

Query: 301 NNDYTHWEMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDM 356
           NNDYTHWEMYAIGGSASPTIYSQGNRF APD R+RKEVTKHEDAPE++WRHWNWRSEGD+
Sbjct: 301 NNDYTHWEMYAIGGSASPTIYSQGNRFAAPDNRFRKEVTKHEDAPETQWRHWNWRSEGDL 360

[Close]

BLAST of Cp4.1LG01g23700 vs. ExPASy TrEMBL
Match: A0A6J1H707 (Pectate lyase OS=Cucurbita moschata OX=3662 GN=LOC111460762 PE=3 SV=1)

HSP 1 Score: 712 bits (1839), Expect = 1.10e-257
Identity = 354/405 (87.41%), Postives = 355/405 (87.65%), Query Frame = 0


Query: 1   MAASFFFLLLLPLSFFFTDSSLAEVQDPHLVVQEVQR-----------------TGNPID 60
           MAASFFFLLLLPLSFFFTDSSLA VQDPHLVVQEVQR                 TGNPID
Sbjct: 53  MAASFFFLLLLPLSFFFTDSSLASVQDPHLVVQEVQRSINESRTRRNLGYLSCRTGNPID 112

Query: 61  DCWRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQ 120
           DCWRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQ
Sbjct: 113 DCWRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQ 172

Query: 121 NEPLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHD 180
           NEPLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHD
Sbjct: 173 NEPLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHD 232

Query: 181 CKRGGNGNIRDSPQHSGWWTISDGDGVSIFGGKHIWVDHCSLSNCNDGLIDAIHGSTAIT 240
           CKRGGNGNIRDSPQHSGWWTISDGDGVSIFGGK+IWVDHCSLSNCNDGLIDAIHGSTAIT
Sbjct: 233 CKRGGNGNIRDSPQHSGWWTISDGDGVSIFGGKNIWVDHCSLSNCNDGLIDAIHGSTAIT 292

Query: 241 ISNNYMTHHDKVML--------------------------------CRHGYFHVVNNDYT 300
           ISNNYMTHHDKVML                                CRHGYFHVVNNDYT
Sbjct: 293 ISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYT 352

Query: 301 HWEMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGA 356
           HWEMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGA
Sbjct: 353 HWEMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGA 412

[Close]

BLAST of Cp4.1LG01g23700 vs. ExPASy TrEMBL
Match: A0A6J1JPY5 (Pectate lyase OS=Cucurbita maxima OX=3661 GN=LOC111487839 PE=3 SV=1)

HSP 1 Score: 709 bits (1829), Expect = 1.04e-256
Identity = 351/405 (86.67%), Postives = 355/405 (87.65%), Query Frame = 0


Query: 1   MAASFFFLLLLPLSFFFTDSSLAEVQDPHLVVQEVQR-----------------TGNPID 60
           MAASFFFLLLLPLSFFFTDSSLA VQDPHLVVQ+VQR                 TGNPID
Sbjct: 19  MAASFFFLLLLPLSFFFTDSSLASVQDPHLVVQQVQRSINESRIRRNLGYLSCRTGNPID 78

Query: 61  DCWRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQ 120
           DCWRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFY+VTDAGDDDPLNPRPGTLRHAVIQ
Sbjct: 79  DCWRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYMVTDAGDDDPLNPRPGTLRHAVIQ 138

Query: 121 NEPLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHD 180
           NEPLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHD
Sbjct: 139 NEPLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHD 198

Query: 181 CKRGGNGNIRDSPQHSGWWTISDGDGVSIFGGKHIWVDHCSLSNCNDGLIDAIHGSTAIT 240
           CKRGGNGNIRDSPQHSGWWTISDGDGVSIFGGK+IWVDHCSLSNCNDGLIDAIHGSTAIT
Sbjct: 199 CKRGGNGNIRDSPQHSGWWTISDGDGVSIFGGKNIWVDHCSLSNCNDGLIDAIHGSTAIT 258

Query: 241 ISNNYMTHHDKVML--------------------------------CRHGYFHVVNNDYT 300
           ISNNYMTHHDKVML                                CRHGYFHVVNNDYT
Sbjct: 259 ISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYT 318

Query: 301 HWEMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGA 356
           HWEMYAIGGSASPTIYSQGNRFLAPDVRY+KEVTKHEDAPESEWRHWNWRSEGDMMLNGA
Sbjct: 319 HWEMYAIGGSASPTIYSQGNRFLAPDVRYQKEVTKHEDAPESEWRHWNWRSEGDMMLNGA 378

[Close]

BLAST of Cp4.1LG01g23700 vs. ExPASy TrEMBL
Match: A0A6J1BYH1 (Pectate lyase OS=Momordica charantia OX=3673 GN=LOC111006418 PE=3 SV=1)

HSP 1 Score: 653 bits (1685), Expect = 5.56e-235
Identity = 323/410 (78.78%), Postives = 342/410 (83.41%), Query Frame = 0


Query: 1   MAASFFFLLLLPLSFFFTDSSLAE-------VQDPHLVVQEVQR---------------T 60
           MAAS  FLLL+ LS     ++ A        VQDPH VVQEV+R               T
Sbjct: 1   MAASLCFLLLISLSLLLWSAAPASASSLPNSVQDPHRVVQEVERSINVSRRNLGYFSCGT 60

Query: 61  GNPIDDCWRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLR 120
           GNPIDDCWRCDPNWE+NRKRLADCAIGFGKNA+GGRNGRFYVV+DAGDDD +NPRPGTLR
Sbjct: 61  GNPIDDCWRCDPNWESNRKRLADCAIGFGKNAMGGRNGRFYVVSDAGDDDAVNPRPGTLR 120

Query: 121 HAVIQNEPLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHG 180
           HAVIQNEPLWIIFKRDMVI+L+QELVMNS+KTIDGRGASVHVAGGPCITIHYA+NIIIHG
Sbjct: 121 HAVIQNEPLWIIFKRDMVIRLKQELVMNSYKTIDGRGASVHVAGGPCITIHYASNIIIHG 180

Query: 181 IHIHDCKRGGNGNIRDSPQHSGWWTISDGDGVSIFGGKHIWVDHCSLSNCNDGLIDAIHG 240
           IHIHDCKRGGNGNIRDSPQHSGWWT+SDGDGVSIFGGKHIWVDHCSLSNCNDGLIDAIHG
Sbjct: 181 IHIHDCKRGGNGNIRDSPQHSGWWTVSDGDGVSIFGGKHIWVDHCSLSNCNDGLIDAIHG 240

Query: 241 STAITISNNYMTHHDKVML--------------------------------CRHGYFHVV 300
           STAITISNNYMTHHDKVML                                CRHGYFHVV
Sbjct: 241 STAITISNNYMTHHDKVMLLGHSDSYTQDKDMQVTIAFNHFGEGLVQRMPRCRHGYFHVV 300

Query: 301 NNDYTHWEMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDM 356
           NNDYTHWEMYAIGGSASPTIYSQGNRF APD R+RKEVTKHEDAPE++WRHWNWRSEGD+
Sbjct: 301 NNDYTHWEMYAIGGSASPTIYSQGNRFAAPDNRFRKEVTKHEDAPETQWRHWNWRSEGDL 360

[Close]

BLAST of Cp4.1LG01g23700 vs. ExPASy TrEMBL
Match: A0A0A0KNX3 (Pectate lyase OS=Cucumis sativus OX=3659 GN=Csa_5G517820 PE=3 SV=1)

HSP 1 Score: 639 bits (1648), Expect = 3.22e-229
Identity = 319/407 (78.38%), Postives = 336/407 (82.56%), Query Frame = 0


Query: 5   FFFLLLLPLSFFFT-------DSSLAEV-QDPHLVVQEVQR---------------TGNP 64
           +F LLLL LSFF +       +SSL  V Q PHLVV+EVQR               TGNP
Sbjct: 12  YFLLLLLSLSFFLSMTAPLPSNSSLPFVHQHPHLVVEEVQRSINGSRRNLGYLSCGTGNP 71

Query: 65  IDDCWRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAV 124
           IDDCWRCD NWETNRKRLADCAIGFGKNAIGG+NGRFYVVTD+G+DDPLNPRPGTLRHAV
Sbjct: 72  IDDCWRCDSNWETNRKRLADCAIGFGKNAIGGKNGRFYVVTDSGNDDPLNPRPGTLRHAV 131

Query: 125 IQNEPLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHI 184
           IQNEPLWIIFKRDMVI+L QELVMNSFKTIDGRGASVH+AGGPCI IHYATNIIIHGIHI
Sbjct: 132 IQNEPLWIIFKRDMVIKLAQELVMNSFKTIDGRGASVHLAGGPCIKIHYATNIIIHGIHI 191

Query: 185 HDCKRGGNGNIRDSPQHSGWWTISDGDGVSIFGGKHIWVDHCSLSNCNDGLIDAIHGSTA 244
           HDCKRGGN NIRDSPQH+GWWT SDGDGVSI GGK IW+DHCSLSNCNDGLIDAIHGSTA
Sbjct: 192 HDCKRGGNANIRDSPQHAGWWTASDGDGVSILGGKQIWIDHCSLSNCNDGLIDAIHGSTA 251

Query: 245 ITISNNYMTHHDKVML--------------------------------CRHGYFHVVNND 304
           ITISNNYMTHHDKVML                                CRHGYFHVVNND
Sbjct: 252 ITISNNYMTHHDKVMLLGHSDSFTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNND 311

Query: 305 YTHWEMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLN 356
           YTHWEMYAIGGSASPTIYSQGNRF+AP  R+RKEVTKHEDAPESEWRHWNWRSEGD++LN
Sbjct: 312 YTHWEMYAIGGSASPTIYSQGNRFVAPYNRFRKEVTKHEDAPESEWRHWNWRSEGDLLLN 371

[Close]

BLAST of Cp4.1LG01g23700 vs. ExPASy TrEMBL
Match: A0A5D3CGC7 (Pectate lyase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold249G00560 PE=3 SV=1)

HSP 1 Score: 636 bits (1641), Expect = 1.55e-228
Identity = 314/387 (81.14%), Postives = 324/387 (83.72%), Query Frame = 0


Query: 18  TDSSLAEV-QDPHLVVQEVQR---------------TGNPIDDCWRCDPNWETNRKRLAD 77
           ++SSL  V Q PHLVV+EVQR               TGNPIDDCWRCD NWETNRKRLAD
Sbjct: 8   SNSSLPFVHQHPHLVVEEVQRSINGSRRNLGYLSCGTGNPIDDCWRCDSNWETNRKRLAD 67

Query: 78  CAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNEPLWIIFKRDMVIQLRQ 137
           CAIGFGKNAIGG+NGRFYVVTDA DDDPLNPRPGTLRHAVIQNEPLWIIFKRDMVIQL Q
Sbjct: 68  CAIGFGKNAIGGKNGRFYVVTDARDDDPLNPRPGTLRHAVIQNEPLWIIFKRDMVIQLEQ 127

Query: 138 ELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCKRGGNGNIRDSPQHSGW 197
           ELVMNSFKTIDGRGASVHVAGGPCI IHYATNIIIHGIHIHDCKRGGN NIRDSPQH+GW
Sbjct: 128 ELVMNSFKTIDGRGASVHVAGGPCIKIHYATNIIIHGIHIHDCKRGGNANIRDSPQHAGW 187

Query: 198 WTISDGDGVSIFGGKHIWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHDKVML---- 257
           WT SDGDGVSI GGK IW+DHCSLSNCNDGLIDAIHGSTAITISNNYMTHHDKVML    
Sbjct: 188 WTASDGDGVSILGGKQIWIDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHDKVMLLGHS 247

Query: 258 ----------------------------CRHGYFHVVNNDYTHWEMYAIGGSASPTIYSQ 317
                                       CRHGYFHVVNNDYTHWEMYAIGGSASPTIYSQ
Sbjct: 248 DSFTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTIYSQ 307

Query: 318 GNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYFRQSGAGAASSYARAYS 356
           GNRF+AP  R+RKEVTKHEDAPESEWRHWNWRSEGDM+LNGAYFRQSGAGA SSYARAYS
Sbjct: 308 GNRFVAPYNRFRKEVTKHEDAPESEWRHWNWRSEGDMLLNGAYFRQSGAGARSSYARAYS 367

[Close]

BLAST of Cp4.1LG01g23700 vs. TAIR 10
Match: AT3G27400.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 577.8 bits (1488), Expect = 6.0e-165
Identity = 279/403 (69.23%), Postives = 312/403 (77.42%), Query Frame = 0


Query: 2   AASFFFLLLLPLSFFFTDSSLAEVQDPHLVVQEVQ----------------RTGNPIDDC 61
           A +F  LL +  +  F+ S    VQDP+LVV +V                 RTGNPIDDC
Sbjct: 10  AYAFLLLLTIGNTLAFSSSLPDHVQDPNLVVDDVNRSVFNASRRSLAYLSCRTGNPIDDC 69

Query: 62  WRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNE 121
           WRCDPNWETNR+RLADCAIGFGKNAIGGR GR YVVTD  +DDP+NPRPGTLR+AV Q E
Sbjct: 70  WRCDPNWETNRQRLADCAIGFGKNAIGGRKGRIYVVTDPANDDPVNPRPGTLRYAVTQEE 129

Query: 122 PLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCK 181
           PLWIIFKRDMVI+L++EL++ SFKTIDGRG+SVH+  GPC+ IHYATNIIIHGI+IHDCK
Sbjct: 130 PLWIIFKRDMVIRLKKELIITSFKTIDGRGSSVHITDGPCLKIHYATNIIIHGINIHDCK 189

Query: 182 RGGNGNIRDSPQHSGWWTISDGDGVSIFGGKHIWVDHCSLSNCNDGLIDAIHGSTAITIS 241
            G  G I+D P H+GWW  SDGD V+IFGGKH+W+DHCSLSNC+DGLIDAIHGSTAITIS
Sbjct: 190 PGSGGMIKDGPHHTGWWMQSDGDAVAIFGGKHVWIDHCSLSNCDDGLIDAIHGSTAITIS 249

Query: 242 NNYMTHHDKVML--------------------------------CRHGYFHVVNNDYTHW 301
           NN+MTHHDKVML                                CRHGYFHVVNNDYTHW
Sbjct: 250 NNHMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW 309

Query: 302 EMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYF 357
           EMYAIGGSASPTIYSQGNRFLAP+ R+ KEVTKHEDAPES+WR WNWRSEGDM+LNGAYF
Sbjct: 310 EMYAIGGSASPTIYSQGNRFLAPNTRFNKEVTKHEDAPESKWRDWNWRSEGDMLLNGAYF 369

[Close]

BLAST of Cp4.1LG01g23700 vs. TAIR 10
Match: AT4G24780.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 557.8 bits (1436), Expect = 6.5e-159
Identity = 269/400 (67.25%), Postives = 309/400 (77.25%), Query Frame = 0


Query: 7   FLLLLPLSFFFTDSSLAEVQDPHLVVQEVQR------------------TGNPIDDCWRC 66
           FLL  PL   F  S    V DP  VV+EV +                  TGNPIDDCWRC
Sbjct: 15  FLLYAPL---FLSS---PVPDPESVVEEVHKSINASVAGRRKLGYLSCTTGNPIDDCWRC 74

Query: 67  DPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNEPLW 126
           DP+WE +R+RLADCAIGFGKNAIGGR+GR YVVTD+G+D+P++P+PGTLRHAV+Q+EPLW
Sbjct: 75  DPHWEQHRQRLADCAIGFGKNAIGGRDGRIYVVTDSGNDNPVSPKPGTLRHAVVQDEPLW 134

Query: 127 IIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCKRGG 186
           IIF+RDM IQL++EL+MNSFKTIDGRGASVH++GGPCITI Y TNIIIHGIHIHDCK+GG
Sbjct: 135 IIFQRDMTIQLKEELIMNSFKTIDGRGASVHISGGPCITIQYVTNIIIHGIHIHDCKQGG 194

Query: 187 NGNIRDSPQHSGWWTISDGDGVSIFGGKHIWVDHCSLSNCNDGLIDAIHGSTAITISNNY 246
           N  +R SP+H GW TISDGDGVSIFGG H+WVDHCS SNC DGLIDAI GSTAIT+SNN+
Sbjct: 195 NAMVRSSPRHFGWRTISDGDGVSIFGGSHVWVDHCSFSNCEDGLIDAIMGSTAITLSNNH 254

Query: 247 MTHHDKVML--------------------------------CRHGYFHVVNNDYTHWEMY 306
           MTHHDKVML                                CRHGYFHVVNNDYTHWEMY
Sbjct: 255 MTHHDKVMLLGHSDTYSRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMY 314

Query: 307 AIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYFRQS 357
           AIGGSA+PTI SQGNRFLAP++R+ KEVTKHEDAPESEW+ WNWRS GD++LNGA+F  S
Sbjct: 315 AIGGSANPTINSQGNRFLAPNIRFSKEVTKHEDAPESEWKRWNWRSSGDLLLNGAFFTPS 374

[Close]

BLAST of Cp4.1LG01g23700 vs. TAIR 10
Match: AT4G24780.2 (Pectin lyase-like superfamily protein )

HSP 1 Score: 557.8 bits (1436), Expect = 6.5e-159
Identity = 269/400 (67.25%), Postives = 309/400 (77.25%), Query Frame = 0


Query: 7   FLLLLPLSFFFTDSSLAEVQDPHLVVQEVQR------------------TGNPIDDCWRC 66
           FLL  PL   F  S    V DP  VV+EV +                  TGNPIDDCWRC
Sbjct: 15  FLLYAPL---FLSS---PVPDPESVVEEVHKSINASVAGRRKLGYLSCTTGNPIDDCWRC 74

Query: 67  DPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNEPLW 126
           DP+WE +R+RLADCAIGFGKNAIGGR+GR YVVTD+G+D+P++P+PGTLRHAV+Q+EPLW
Sbjct: 75  DPHWEQHRQRLADCAIGFGKNAIGGRDGRIYVVTDSGNDNPVSPKPGTLRHAVVQDEPLW 134

Query: 127 IIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCKRGG 186
           IIF+RDM IQL++EL+MNSFKTIDGRGASVH++GGPCITI Y TNIIIHGIHIHDCK+GG
Sbjct: 135 IIFQRDMTIQLKEELIMNSFKTIDGRGASVHISGGPCITIQYVTNIIIHGIHIHDCKQGG 194

Query: 187 NGNIRDSPQHSGWWTISDGDGVSIFGGKHIWVDHCSLSNCNDGLIDAIHGSTAITISNNY 246
           N  +R SP+H GW TISDGDGVSIFGG H+WVDHCS SNC DGLIDAI GSTAIT+SNN+
Sbjct: 195 NAMVRSSPRHFGWRTISDGDGVSIFGGSHVWVDHCSFSNCEDGLIDAIMGSTAITLSNNH 254

Query: 247 MTHHDKVML--------------------------------CRHGYFHVVNNDYTHWEMY 306
           MTHHDKVML                                CRHGYFHVVNNDYTHWEMY
Sbjct: 255 MTHHDKVMLLGHSDTYSRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMY 314

Query: 307 AIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYFRQS 357
           AIGGSA+PTI SQGNRFLAP++R+ KEVTKHEDAPESEW+ WNWRS GD++LNGA+F  S
Sbjct: 315 AIGGSANPTINSQGNRFLAPNIRFSKEVTKHEDAPESEWKRWNWRSSGDLLLNGAFFTPS 374

[Close]

BLAST of Cp4.1LG01g23700 vs. TAIR 10
Match: AT5G63180.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 552.0 bits (1421), Expect = 3.6e-157
Identity = 269/402 (66.92%), Postives = 306/402 (76.12%), Query Frame = 0


Query: 6   FFLLLLPLSFFFTDSSLAEVQDPHLVVQEVQR-----------------TGNPIDDCWRC 65
           F L+      F   +S   V DP LVV+EV R                 +GNPIDDCWRC
Sbjct: 31  FALIFFCCILFSALASSLPVSDPELVVEEVHRKINESISRRKLGFFSCGSGNPIDDCWRC 90

Query: 66  DPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNEPLW 125
           D +WE NRKRLADC IGFGKNAIGGR+G  YVVTD G+DDP+NPRPGTLR+AVIQ+EPLW
Sbjct: 91  DKDWEKNRKRLADCGIGFGKNAIGGRDGEIYVVTDPGNDDPVNPRPGTLRYAVIQDEPLW 150

Query: 126 IIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCKRGG 185
           IIFKRDM IQL++EL+MNSFKT+DGRGASVH++GGPCITI Y TNIIIHG+HIHDCK+GG
Sbjct: 151 IIFKRDMTIQLKEELIMNSFKTLDGRGASVHISGGPCITIQYVTNIIIHGLHIHDCKQGG 210

Query: 186 NGNIRDSPQHSGWWTISDGDGVSIFGGKHIWVDHCSLSNCNDGLIDAIHGSTAITISNNY 245
           N  +RDSP+H G+ T+SDGDGVSIFGG H+WVDHCSLSNCNDGLIDAI GSTAITISNNY
Sbjct: 211 NTYVRDSPEHYGYRTVSDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIRGSTAITISNNY 270

Query: 246 MTHHDKVML--------------------------------CRHGYFHVVNNDYTHWEMY 305
           +THH+KVML                                CRHGYFHVVNNDYTHWEMY
Sbjct: 271 LTHHNKVMLLGHSDTYEQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMY 330

Query: 306 AIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYFRQS 357
           AIGGSA+PTI SQGNRFLAPD    KEVTKHEDAPE EWR+WNWRSEGD++LNGA+F  S
Sbjct: 331 AIGGSANPTINSQGNRFLAPDDSSSKEVTKHEDAPEDEWRNWNWRSEGDLLLNGAFFTYS 390

[Close]

BLAST of Cp4.1LG01g23700 vs. TAIR 10
Match: AT1G67750.1 (Pectate lyase family protein )

HSP 1 Score: 540.0 bits (1390), Expect = 1.4e-153
Identity = 267/403 (66.25%), Postives = 304/403 (75.43%), Query Frame = 0


Query: 1   MAASFFFLLLLPLSFFFTDSSLAEVQDPHLVVQEVQR---------------TGNPIDDC 60
           ++ S F  LLL LS  F  S+   V +P LVVQEV                 TGNPIDDC
Sbjct: 8   LSLSLFSCLLLVLSPTFIAST--PVSEPELVVQEVNEKINASRRNLGVLSCGTGNPIDDC 67

Query: 61  WRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNE 120
           WRCDP WE NR+RLADCAIGFGK+AIGGR+G+ YVVTD+ D D +NP+PGTLRHAVIQ+E
Sbjct: 68  WRCDPKWEKNRQRLADCAIGFGKHAIGGRDGKIYVVTDSSDKDVVNPKPGTLRHAVIQDE 127

Query: 121 PLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCK 180
           PLWIIF RDMVI+L++EL+MNSFKTIDGRGASVH+AGG CIT+ Y TNIIIHG++IHDCK
Sbjct: 128 PLWIIFARDMVIKLKEELIMNSFKTIDGRGASVHIAGGACITVQYVTNIIIHGVNIHDCK 187

Query: 181 RGGNGNIRDSPQHSGWWTISDGDGVSIFGGKHIWVDHCSLSNCNDGLIDAIHGSTAITIS 240
           R GN  +RDSP H GW T SDGD VSIFGG H+WVDHCSLSNC DGLIDAIHGSTAITIS
Sbjct: 188 RKGNAYVRDSPSHYGWRTASDGDAVSIFGGSHVWVDHCSLSNCADGLIDAIHGSTAITIS 247

Query: 241 NNYMTHHDKVML--------------------------------CRHGYFHVVNNDYTHW 300
           NNY++HH+KVML                                CRHGYFHVVNNDYTHW
Sbjct: 248 NNYLSHHNKVMLLGHSDSYTRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW 307

Query: 301 EMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYF 357
           +MYAIGGSA+PTI SQGNRFLAP+    KEVTK+EDAP S+W+ WNWRSEGD+ LNGA+F
Sbjct: 308 QMYAIGGSAAPTINSQGNRFLAPNDHVFKEVTKYEDAPRSKWKKWNWRSEGDLFLNGAFF 367

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g23700 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LTZ0	8.5e-164	69.23	Putative pectate lyase 11 OS=Arabidopsis thaliana OX=3702 GN=At3g27400 PE=3 SV=2	[more]
O24554	9.4e-163	70.03	Pectate lyase OS=Zinnia violacea OX=34245 PE=1 SV=1	[more]
Q9C5M8	9.1e-158	67.25	Probable pectate lyase 18 OS=Arabidopsis thaliana OX=3702 GN=At4g24780 PE=2 SV=2	[more]
P24396	1.3e-156	68.07	Probable pectate lyase P18 OS=Solanum lycopersicum OX=4081 GN=9612 PE=2 SV=1	[more]
Q93Z25	5.0e-156	66.92	Probable pectate lyase 22 OS=Arabidopsis thaliana OX=3702 GN=At5g63180 PE=2 SV=1	[more]

BLAST of Cp4.1LG01g23700 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023526071.1	4.87e-260	87.90	pectate lyase-like [Cucurbita pepo subsp. pepo]	[more]
XP_022959813.1	2.27e-257	87.41	pectate lyase-like [Cucurbita moschata]	[more]
KAG6602397.1	1.56e-256	86.91	putative pectate lyase 11, partial [Cucurbita argyrosperma subsp. sororia] >KAG7...	[more]
XP_022991156.1	2.15e-256	86.67	pectate lyase-like, partial [Cucurbita maxima]	[more]
XP_022134052.1	1.15e-234	78.78	pectate lyase-like [Momordica charantia]	[more]

BLAST of Cp4.1LG01g23700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H707	1.10e-257	87.41	Pectate lyase OS=Cucurbita moschata OX=3662 GN=LOC111460762 PE=3 SV=1	[more]
A0A6J1JPY5	1.04e-256	86.67	Pectate lyase OS=Cucurbita maxima OX=3661 GN=LOC111487839 PE=3 SV=1	[more]
A0A6J1BYH1	5.56e-235	78.78	Pectate lyase OS=Momordica charantia OX=3673 GN=LOC111006418 PE=3 SV=1	[more]
A0A0A0KNX3	3.22e-229	78.38	Pectate lyase OS=Cucumis sativus OX=3659 GN=Csa_5G517820 PE=3 SV=1	[more]
A0A5D3CGC7	1.55e-228	81.14	Pectate lyase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold249G00560 ...	[more]

BLAST of Cp4.1LG01g23700 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G27400.1	6.0e-165	69.23	Pectin lyase-like superfamily protein	[more]
AT4G24780.1	6.5e-159	67.25	Pectin lyase-like superfamily protein	[more]
AT4G24780.2	6.5e-159	67.25	Pectin lyase-like superfamily protein	[more]
AT5G63180.1	3.6e-157	66.92	Pectin lyase-like superfamily protein	[more]
AT1G67750.1	1.4e-153	66.25	Pectate lyase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018082	AmbAllergen	PRINTS	PR00807	AMBALLERGEN	coord: 186..207 score: 56.71 coord: 62..79 score: 58.99 coord: 122..138 score: 71.43 coord: 86..111 score: 68.68
IPR002022	Pectate lyase	SMART	SM00656	amb_all	coord: 114..279 e-value: 9.1E-64 score: 227.8
IPR002022	Pectate lyase	PFAM	PF00544	Pectate_lyase_4	coord: 120..239 e-value: 1.7E-6 score: 27.8
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 39..239 e-value: 1.0E-70 score: 240.4 coord: 240..349 e-value: 1.4E-23 score: 85.5
IPR045032	Pectin lyase family	PANTHER	PTHR31683	PECTATE LYASE 18-RELATED	coord: 4..237
IPR045032	Pectin lyase family	PANTHER	PTHR31683	PECTATE LYASE 18-RELATED	coord: 238..353
None	No IPR available	PANTHER	PTHR31683:SF147	PECTATE LYASE	coord: 4..237
None	No IPR available	PANTHER	PTHR31683:SF147	PECTATE LYASE	coord: 238..353
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 36..351

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g23700.1	Cp4.1LG01g23700.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045490	pectin catabolic process
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0030570	pectate lyase activity