Cp4.1LG01g23580 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g23580
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	altered inheritance of mitochondria protein 32-like
Location	Cp4.1LG01: 19585231 .. 19591119 (-)
RNA-Seq Expression	Cp4.1LG01g23580
Synteny	Cp4.1LG01g23580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGTGAGAAATTCAAATCATTTGGAAATTCGATTCATGTTTCGCGTTCGCTGTTTCCTGGTGGTAGTTGGTGGAACTTAGATGAGCGTATGAAAGTAGAAATTGAAGCTTCGAAGCCGCTTATACTTTATTTAGCTCTTCATCAGGTATGGAAATTGGTTTGGGATATTAATCAATGGCTTCTCCTCGTTCCTTCTGTAGCTTCAACGCTGCTGAGGCGCAGTTACTAAGCTGTTCTGTATTATCACTGTGCTGATATTTAGTTTTAGCGTTCTCTATACATCTGAAATTGATTTATCTTTACATGTTGACCACCGCACTAATTAGAAAAATCTTTCAAGAAAGATTCCATTCCCGCTTCTTCTTTTTTTTCTTCCTTCTTTTGATGATAACAAGAAACTTTTCATCAGGTAAATTGAAAAGAATTACATCATAGCCAGCCCAAAAAAAGCCTCTCCAATTGGTTGGTCCCAGGCTTGGAAGTTTTCTGAATGGGAAGATTGTTACTCGATTGAACATTGTGGGGTTGAAAGTAGATCCGGGAAGATTGAGGTTAGTTCATGAACTAGTTGCTTATTGAAAAGTGGGATTTGATTTAGTAGGTTATGAGGAATCCTTGTATGTCTTTTGAGGTTAAATTGTTACGTGATCACGATGGCTATATATATTACTTAATCGTTGATAGCCATGATTAGCACCTTTAGCAGATGTGTTCAATTTTCCTTAGAAGCCGATACCTTAATTTGTCAAGTCTTCCTATGAACAGTGTGTATAACAATGTTCGTATGAGATCCCACATCGGTTGGGAAGGAAAACGAAGTATTCTTTATAAGGGTGTGAAAACCTTTCTTTAGCAAACGTGTTTTAAAACCTTGAAGGAAAGTCTGAAAGGGGAAGCCCAAAGAGGACAATATCTACTAGCGGTGGGTTGAGCTGTTACAAATGGTATCAGAGCCAGACACTGGGCGATGTGCCAGTGAGGAGGATGAGCCTCAGGGGTGGACACGAGGCGGTGTGCCAGTAAGGACGCTGGGCCCCGAAGGGGGTGGATTGGGGAGTCCCACATCGATTAGAGAAGGGAACGAGTGCCAGTGAAGACACTGGACTTCGAAGGGGGGTGGATTGTGAGATCCCACATCGGTTGGGGAGGAAACAAAGCATTCTGAGTGTGGAAACCTTCCCCTAGCAAACGCGTTCTAAAAATCTTGAGAGGAAGCCCAAAGAAAACAATATCTATTGGCGGTGGGCTTGGGCCGTTACCGTTCGAATTTCAAAGTATATATAGTATTGTGTTTACTTGAATCTCTGTTGAACTTCTGGATTGATATCAGCTTACATTTGCTGCTTTTGCAGTTCAGTTGTCTGGTAAATTGCTTTGTTAATTTGTCTTTATTCAAATTATTTGCTCACTTTTTGTCTGTGCAGCATAGTTGGCATTGGTTTCCATTTAAAAAGGAGATTAGTAGAACCCATAATTCTCTCAAATACAGGTTTGTACTGACAACTTGTCCATTAAGAAACAATAACGTCATCAAACAAGTTCAAATTTGTTCATAAAATGGTCATATCCACGTCTTCCTCTTGAATTGCAATAAGAATCATCTCTTAATTGCTTGAAGATCAGAGGCAATCAAGAAGCGAACCAGGTATAAGCTAAATGACTATGGACTGATTTTTCCACACTTGAAAGGTCCAACAATGGTGAGCTTGGCGAGAACATCAATTGAGATGCTTGCTAAAGCAATGTACAATGCAAAACATTTGCCCCACCTTGCTGTGCTCCATTGGCACGCACATAAAACTGCCAATGGACTGATTTTTTGTGAGATCCAATTTTGGTTGGGGAGGGAAACGAAGGATTCCTTATAAGGGTGTGGAAACTTCTCTCTAGTAGACACGTTTTAAAACCGTGAAGTTGACGGCGATACGTTAACGAGCCAAAGCGAACAATATCTGCTAGCAGCGGGTTTGAATTATTAATCTTTACTGTGTATGTTCTTATATAGTTCACTTACCAAAATAGTCTTGTTTGTTATCTGTAGGGGGAAAGAAACGTGAATCATTTTTGTCTTGATTTCAATTGAGTTTTGTTTCAGAACTCGCAATGTGGGGGAGATTGTGACAGTAGAAGGCCAGACATACACCATCTTAGCTGTAACTCTAGGGGAAGTATGAACCAAGTGAAGAGAGACTTGATGTTTTGTTCACGGGAAGGTACGTCTTCAATTTGTAAATAAACCAATGATATTTCTAAACTTAATTTTTAGGGAAAAAATTCATTTTTAGTTCTTGAGTTTGTTAGTTTCTGAAGGGACCAGCCAAACCAACTTTGATCAAAGTATCTCGAACATTCTTCATAGACTCGACGGCTACTTTACCTTCTTCGAGGTTAAGAAATAGAAGTTTAAGTTTAGGTTCAAGTTCAGGTACTTTACCTCATTCAATAAGGTCGTAAAATAGAGGTTGAGGTGTAGGGGGAGAGTGTGCTTTTAGCTCTTTCGAGCTGGAAAAGGTAAGTATTAAGAATGAAAATAAAAACTAAATTAAAAATTTAGAAATAAAAATGTAATATTTTGAAATTTATCGACTAAATCTAAATTAAAAAATTAAAGATAAAAAAAAATTAATATTATATATATATATATATATTTTTAAAAACTAATTCTTGAAACCCAAATCTAAAATGTTAGTATGTTTACAGCTAAAAAAATATAAACTTCCGTTGGCGCGTGTTGCAAGCACCACTGTCGCGTGGCTCAAGTCGTTGTCCAAAGCACTCATAAAGCGTCACCATATGGGATTCAGAACCAGAAGAAATCCGATCCCTTCTCGTTTCCCGCTCCCCGCTCCCCGCTCCACCCGCTACCTCCTCTCCGCCATCTCTTTCCACCATTACCACTTTCTTCACTATTCTCATTCTCTGACCTCGTTTCGTCGATCTCTCTATGGCTTCCGATAATCTCGACACCGTTTCCGGCGCCGACGACGAGAAGTTTGGATTCCGACGAGAGGAGATGTATCAGAGCAGCCTCGCTGGCACCGTCAGCGCCTATGATCGCCACGTTTTTCTCTGCTACAAGACTCCGGAGGCCTGGCCATCGCATCTCGAAGCATCTGATTCCGACGCCCTCCCTAGGCTCCTCTCTGCCGCTCTCAAAGCTCGCAAGGATGATATCTCCGTTAAGGTTTGCAAATCGATGCTGTTTGTTTCTGTATTCGGAAATCCTATTCCTTCGGAATTTGGCGTTTTCGATTTGGTTTTGTTAGGAGTTGTTGAATGCCGTGGATTTTAGTGGATGCTTTTGTGTGCAACTTTGTCTTTTAATTGGTTTTGTCAGACGAAGCTGACAATGTTCGCTGGACGAGAGGAAACTGGATTTTCGGATGGAGATGTGTTGATTTTTCCTGAAATGGTCAAATACAGGTAACTTTTGAGAATCAGGTGGAATCTTGTTGTGGTTTTCGAAAATTTTCCGGCAGCTGATGATAAGCTGCTGGAAATATGCTTTGCCACTTCTCAAGGATATAATAATGTATTTATCAAATATTATGAAATTCTTGCGTTCATCTTTATTTCTTCTGGTGTTGACTTTAACTTCTTTGGTTTCCATGCACATAATGAAACTTTGGGTATTCTTCCTTGCTACCTTCCTGGATCGTTATTTTTTTTATAATTAATCTGATCGCTAGCAAATTACTACGATTGTGGTTTCTGTATCTAGTATATTTTATCAATTATGAGGCCAAACAAGTTTTAGATCAGTAAGATTTTGGAGTAATTGGAATGTTCTTTTCCTGTTATTTGTGCCGCTGTTCCGTTTTCCTTCCTTTCATTTCCATTTTCATTTTCATATTTCGTCCTCTTGATTTGATGATAATAGGGGTTTAAAAGAGTCAGATGTGGATGGCTTCGTGGATGATGTGCTTGTGAATGATAAACAGTGGGCATCCGGAGTGCCAGAGGCTTTCACTGGCTCTCACGTGTTTGTGTGTGTTCATGCTAGTCGAGATCGGAGATGTGGTGTCTGTGGACCTGCTCTTGTTCAGAAGTTGGATGAGGAGGTTGAGTTACGAGGACTTAAGGAACGGGTTTTTGTCAGTGCATGTTCACACATTGGAGGACACAAGTATGCCGGAAACTTGATCATATATCAACCTGGTGTGGATGGGAAGACAACTGGTCACTGGTAAGGTTCTTCAAAGCTAGCATAAACATTTACTGGAAAACGAAATCCTTAGCTGAATATTTAGTGTCTACTTGGGTTGAATTTGGGGTTCAATTTCCTTGTTTATAGGTACGGATATGTAACTCCTGAAGATGTCTCTGAATTGTTTGAACTTCACATTGCAAAGGGCGAGGTCGTGGAAAGGCTTTTAAGGTTTGTGCTTCTCCAGTTGCATTTTATTTCCTGAACTGGATAGTGAATTTATTTTGTATTGCTGGTATTAATAATTAATAGTGAGTTTTAAGGAGAAGCATTCTTTTTTATTGTTTTTTTGGGATATACATTTTTGTATCAATAATCAATTTTTTCTTCTGAACTTTTAGACCCTGTAATTTACAGATCATGGACATATCATCCTCCTCTCCATTTTCTATATGTACTTCGTATTGAGTATTGTGAACAATTTTTATTTTTCTTATCATCCCCTTGTTGCTGTGGAAAACTTTGAGTAGACCTGAGTGTTTGAGATCTAAAGCTGGAACTGTACGTTGTTATCAATTACAAGATCTTAATTGATATCTTGAACCTTTAGGCCGTTGGCTTTTGCCTTACTTTTGAGCATCAGATTCCCCGGTTCAAGTCTTGATGCCTCCTGTAAGAGTGGACATACTATTGTTAGTATTCATCGTTCATGTTAACTATTCACCAAATTGCAACTCACTTTAGCCCTCTGCATCGCACAGTATATGACCTAAATGTTTGTAATGCAATATGTTCATTGACTACTTGACCGACCTACTTTTGGCTTCACTGTAGCTACCTCAATCACCTTTGCTTGATTGTTGATTCCGAAGAGCTACCTCTTAAACCTTATGTTGTTCCCCAAAGAATAAATTATATATTTAGAAGTGAAATGGATGCAATTGTTTGGTTCTTCTTTGTCATTTATTTTCCACCCAATAGTAGAACATTAAATTGGCATTCCAATTCCAGAGGGCAAATGGGCACAAATCCCGAGGAAGGCAAAAAGGAAGATGAACTAAAGATTCCAAATGGAGAAGATACAAAGAAAAGTAAGGTTGAAATTGAAGAAAACAGCGGTCAAAGCAAAGTGGAAACAATAGCAGGTTGTTGCCAGGGCAGTAATGGATTCACTTGTTGCAGAGATGAAAGTTCAGGGAAAAGTAGTAGAATTGAAAACCAGTCGAAAGAAGCTTCAGAAGAGCAGGTACCAAAGAAAGCTAATAAATTTTCTTGCTGGACAGGACAATGGGAACAAAGTGAAATTCTGGCTGCTGCTGCGATAATTGGAGCAGTGGCCTCTGTCGCTGTTGCCTACAGCCTCTATAGGAGATCAGGATAAAATATAAATGGTATGTCTATGTTTGTTTGCTCATAAAAGTATCTATGCCCTGTTTTCTGGTAGAATATTTGGTGATATTAGTAAAGATAGAGCAATTTGCTGAATTAGATTTATAGAATAGTGTAATGATACCAACAGGACTCTTAGAGCAAAGACTAGACAAAATCTTCTTCTACCTCTATTTACTTTATCTACAGATACAAATTATTTGTTTCTTTCAATACGCATACAAATGATGAATATCATGTTGTAGGATGATGAGGGATTATTTTCTGCTTGTTGCTTATTCAATGTTAAATGATTTTTTTAGTTCAATAAATGTGGTGTGGATGATTTAACTTCCTACCTTGGAGAATG

mRNA sequence

ATGGAACATAGTTGGCATTGGTTTCCATTTAAAAAGGAGATTAGTAGAACCCATAATTCTCTCAAATACAGATCAGAGGCAATCAAGAAGCGAACCAGAACTCGCAATGTGGGGGAGATTGTGACAGTAGAAGGCCAGACATACACCATCTTAGCTGTAACTCTAGGGGAACTAAAAAAATATAAACTTCCGTTGGCGCGTGTTGCAAGCACCACTGTCGCGTGGCTCAAGTCGTTGTCCAAAGCACTCATAAAGCGTCACCATATGGGATTCAGAACCAGAAGAAATCCGATCCCTTCTCGTTTCCCGCTCCCCGCTCCCCGCTCCACCCGCTACCTCCTCTCCGCCATCTCTTTCCACCATTACCACTTTCTTCACTATTCTCATTCTCTGACCTCGTACGGATATGTAACTCCTGAAGATGTCTCTGAATTGTTTGAACTTCACATTGCAAAGGGCGAGGTCGTGGAAAGGCTTTTAAGAGGGCAAATGGGCACAAATCCCGAGGAAGGCAAAAAGGAAGATGAACTAAAGATTCCAAATGGAGAAGATACAAAGAAAAGTAAGGTTGAAATTGAAGAAAACAGCGGTCAAAGCAAAGTGGAAACAATAGCAGGTTGTTGCCAGGGCAGTAATGGATTCACTTGTTGCAGAGATGAAAGTTCAGGGAAAAGTAGTAGAATTGAAAACCAGTCGAAAGAAGCTTCAGAAGAGCAGGTACCAAAGAAAGCTAATAAATTTTCTTGCTGGACAGGACAATGGGAACAAAGTGAAATTCTGGCTGCTGCTGCGATAATTGGAGCAGTGGCCTCTGTCGCTGTTGCCTACAGCCTCTATAGGAGATCAGGATAAAATATAAATGGTATGTCTATGTTTGTTTGCTCATAAAAGTATCTATGCCCTGTTTTCTGGTAGAATATTTGGTGATATTAGTAAAGATAGAGCAATTTGCTGAATTAGATTTATAGAATAGTGTAATGATACCAACAGGACTCTTAGAGCAAAGACTAGACAAAATCTTCTTCTACCTCTATTTACTTTATCTACAGATACAAATTATTTGTTTCTTTCAATACGCATACAAATGATGAATATCATGTTGTAGGATGATGAGGGATTATTTTCTGCTTGTTGCTTATTCAATGTTAAATGATTTTTTTAGTTCAATAAATGTGGTGTGGATGATTTAACTTCCTACCTTGGAGAATG

Coding sequence (CDS)

ATGGAACATAGTTGGCATTGGTTTCCATTTAAAAAGGAGATTAGTAGAACCCATAATTCTCTCAAATACAGATCAGAGGCAATCAAGAAGCGAACCAGAACTCGCAATGTGGGGGAGATTGTGACAGTAGAAGGCCAGACATACACCATCTTAGCTGTAACTCTAGGGGAACTAAAAAAATATAAACTTCCGTTGGCGCGTGTTGCAAGCACCACTGTCGCGTGGCTCAAGTCGTTGTCCAAAGCACTCATAAAGCGTCACCATATGGGATTCAGAACCAGAAGAAATCCGATCCCTTCTCGTTTCCCGCTCCCCGCTCCCCGCTCCACCCGCTACCTCCTCTCCGCCATCTCTTTCCACCATTACCACTTTCTTCACTATTCTCATTCTCTGACCTCGTACGGATATGTAACTCCTGAAGATGTCTCTGAATTGTTTGAACTTCACATTGCAAAGGGCGAGGTCGTGGAAAGGCTTTTAAGAGGGCAAATGGGCACAAATCCCGAGGAAGGCAAAAAGGAAGATGAACTAAAGATTCCAAATGGAGAAGATACAAAGAAAAGTAAGGTTGAAATTGAAGAAAACAGCGGTCAAAGCAAAGTGGAAACAATAGCAGGTTGTTGCCAGGGCAGTAATGGATTCACTTGTTGCAGAGATGAAAGTTCAGGGAAAAGTAGTAGAATTGAAAACCAGTCGAAAGAAGCTTCAGAAGAGCAGGTACCAAAGAAAGCTAATAAATTTTCTTGCTGGACAGGACAATGGGAACAAAGTGAAATTCTGGCTGCTGCTGCGATAATTGGAGCAGTGGCCTCTGTCGCTGTTGCCTACAGCCTCTATAGGAGATCAGGATAA

Protein sequence

MEHSWHWFPFKKEISRTHNSLKYRSEAIKKRTRTRNVGEIVTVEGQTYTILAVTLGELKKYKLPLARVASTTVAWLKSLSKALIKRHHMGFRTRRNPIPSRFPLPAPRSTRYLLSAISFHHYHFLHYSHSLTSYGYVTPEDVSELFELHIAKGEVVERLLRGQMGTNPEEGKKEDELKIPNGEDTKKSKVEIEENSGQSKVETIAGCCQGSNGFTCCRDESSGKSSRIENQSKEASEEQVPKKANKFSCWTGQWEQSEILAAAAIIGAVASVAVAYSLYRRSG

Homology

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BLAST of Cp4.1LG01g23580 vs. NCBI nr
Match: XP_023536213.1 (altered inheritance of mitochondria protein 32-like [Cucurbita pepo subsp. pepo] >XP_023536217.1 altered inheritance of mitochondria protein 32-like [Cucurbita pepo subsp. pepo] >XP_023536224.1 altered inheritance of mitochondria protein 32-like [Cucurbita pepo subsp. pepo] >XP_023536231.1 altered inheritance of mitochondria protein 32-like [Cucurbita pepo subsp. pepo] >XP_023536238.1 altered inheritance of mitochondria protein 32-like [Cucurbita pepo subsp. pepo] >XP_023536247.1 altered inheritance of mitochondria protein 32-like [Cucurbita pepo subsp. pepo] >XP_023536251.1 altered inheritance of mitochondria protein 32-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 287 bits (735), Expect = 2.76e-92
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 134 YGYVTPEDVSELFELHIAKGEVVERLLRGQMGTNPEEGKKEDELKIPNGEDTKKSKVEIE 193
           YGYVTPEDVSELFELHIAKGEVVERLLRGQMGTNPEEGKKEDELKIPNGEDTKKSKVEIE
Sbjct: 212 YGYVTPEDVSELFELHIAKGEVVERLLRGQMGTNPEEGKKEDELKIPNGEDTKKSKVEIE 271

Query: 194 ENSGQSKVETIAGCCQGSNGFTCCRDESSGKSSRIENQSKEASEEQVPKKANKFSCWTGQ 253
           ENSGQSKVETIAGCCQGSNGFTCCRDESSGKSSRIENQSKEASEEQVPKKANKFSCWTGQ
Sbjct: 272 ENSGQSKVETIAGCCQGSNGFTCCRDESSGKSSRIENQSKEASEEQVPKKANKFSCWTGQ 331

Query: 254 WEQSEILAAAAIIGAVASVAVAYSLYRRSG 283
           WEQSEILAAAAIIGAVASVAVAYSLYRRSG
Sbjct: 332 WEQSEILAAAAIIGAVASVAVAYSLYRRSG 361

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BLAST of Cp4.1LG01g23580 vs. NCBI nr
Match: KAG6602416.1 (hypothetical protein SDJN03_07649, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 291 bits (744), Expect = 2.78e-92
Identity = 200/404 (49.50%), Postives = 210/404 (51.98%), Query Frame = 0


Query: 57  ELKKYKLPLARVASTTVAWLKSLSKALIKRHHMGFRTRRNPIPSRFPLPA--------PR 116
           E  KY+LPLARVASTTVAWLKSLSKALIKR+ MGFR+RRNPIPSRFP P         P 
Sbjct: 62  EANKYELPLARVASTTVAWLKSLSKALIKRYQMGFRSRRNPIPSRFPFPPFRYLFPPLPL 121

Query: 117 STRY----LLSAISF--------------------------------------------- 176
           S+ +    L+S+IS                                              
Sbjct: 122 SSLFSFSDLVSSISLWLPIISPPFPAPTTRSLDFDERRCIRAASLAPLLSAALKARKDDI 181

Query: 177 ------------------------------------------------------------ 236
                                                                       
Sbjct: 182 SVKTKLTMFAGRVETGFSDGDVLIFPEMVKYRGLKESDVDDFVDDVLVNDKQWASGVPEA 241

Query: 237 ----HHYHFLHYS---------------------------------------HSLTS--- 283
               H +  +H S                                       H       
Sbjct: 242 FTGSHVFVCVHASRDRRCGVCGPVLVQKLDEEIELRGLKERVFVSACSHVGGHKYAGNMI 301

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BLAST of Cp4.1LG01g23580 vs. NCBI nr
Match: KAG7033092.1 (AIM32, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 284 bits (726), Expect = 6.32e-91
Identity = 148/150 (98.67%), Postives = 149/150 (99.33%), Query Frame = 0


Query: 134 YGYVTPEDVSELFELHIAKGEVVERLLRGQMGTNPEEGKKEDELKIPNGEDTKKSKVEIE 193
           YGYVTPEDVSELFE HIAKGEVVERLLRGQMGTNPEEGKKEDELKIPNGEDTKKSKVEIE
Sbjct: 212 YGYVTPEDVSELFERHIAKGEVVERLLRGQMGTNPEEGKKEDELKIPNGEDTKKSKVEIE 271

Query: 194 ENSGQSKVETIAGCCQGSNGFTCCRDESSGKSSRIENQSKEASEEQVPKKANKFSCWTGQ 253
           ENSGQSKVETIAGCCQGSNGFTCCRDESSGKSSRIENQSKEASEEQVPKKANKFSCWTGQ
Sbjct: 272 ENSGQSKVETIAGCCQGSNGFTCCRDESSGKSSRIENQSKEASEEQVPKKANKFSCWTGQ 331

Query: 254 WEQSEILAAAAIIGAVASVAVAYSLYRRSG 283
           WEQSEILAAAAIIGAVA+VAVAYSLYRRSG
Sbjct: 332 WEQSEILAAAAIIGAVATVAVAYSLYRRSG 361

[Close]

BLAST of Cp4.1LG01g23580 vs. NCBI nr
Match: XP_022991030.1 (altered inheritance of mitochondria protein 32-like [Cucurbita maxima] >XP_022991031.1 altered inheritance of mitochondria protein 32-like [Cucurbita maxima] >XP_022991032.1 altered inheritance of mitochondria protein 32-like [Cucurbita maxima])

HSP 1 Score: 281 bits (719), Expect = 7.22e-90
Identity = 145/150 (96.67%), Postives = 149/150 (99.33%), Query Frame = 0


Query: 134 YGYVTPEDVSELFELHIAKGEVVERLLRGQMGTNPEEGKKEDELKIPNGEDTKKSKVEIE 193
           YGYVTPEDVSELFELHIAKGEVVERLLRGQMGTNPEEGKKEDELKIPNG+DTKKSKVEIE
Sbjct: 212 YGYVTPEDVSELFELHIAKGEVVERLLRGQMGTNPEEGKKEDELKIPNGDDTKKSKVEIE 271

Query: 194 ENSGQSKVETIAGCCQGSNGFTCCRDESSGKSSRIENQSKEASEEQVPKKANKFSCWTGQ 253
           ENSGQ+KVETIAGCCQGSNGFTCCRDESSGKSSRIENQSKEASEEQVPKKANKFSCWTGQ
Sbjct: 272 ENSGQNKVETIAGCCQGSNGFTCCRDESSGKSSRIENQSKEASEEQVPKKANKFSCWTGQ 331

Query: 254 WEQSEILAAAAIIGAVASVAVAYSLYRRSG 283
           WEQSEILAAAA IGAVA+VAVAYS+YRRSG
Sbjct: 332 WEQSEILAAAATIGAVATVAVAYSIYRRSG 361

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BLAST of Cp4.1LG01g23580 vs. NCBI nr
Match: XP_038890361.1 (altered inheritance of mitochondria protein 32-like [Benincasa hispida])

HSP 1 Score: 236 bits (602), Expect = 3.15e-72
Identity = 122/150 (81.33%), Postives = 134/150 (89.33%), Query Frame = 0


Query: 134 YGYVTPEDVSELFELHIAKGEVVERLLRGQMGTNPEEGKKEDELKIPNGEDTKKSKVEIE 193
           YGYVTPEDVSELFE HIAKGEVVERLLRGQMGTNPEE +KE E K+PNGEDTK+SKVEI+
Sbjct: 212 YGYVTPEDVSELFERHIAKGEVVERLLRGQMGTNPEEVQKEGERKLPNGEDTKRSKVEIQ 271

Query: 194 ENSGQSKVETIAGCCQGSNGFTCCRDESSGKSSRIENQSKEASEEQVPKKANKFSCWTGQ 253
           EN  QS VET  GC QGSNGFTCCRDESS K+SRIE +SKE SE+QVPK  +KFSCWTG+
Sbjct: 272 ENGDQSIVETFTGCSQGSNGFTCCRDESSAKTSRIEEKSKEISEDQVPKMGSKFSCWTGK 331

Query: 254 WEQSEILAAAAIIGAVASVAVAYSLYRRSG 283
           WEQSEILAA A+IGAVA+VAVAYS+YRRSG
Sbjct: 332 WEQSEILAAVAVIGAVATVAVAYSIYRRSG 361

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BLAST of Cp4.1LG01g23580 vs. ExPASy TrEMBL
Match: A0A6J1JRQ9 (altered inheritance of mitochondria protein 32-like OS=Cucurbita maxima OX=3661 GN=LOC111487744 PE=4 SV=1)

HSP 1 Score: 281 bits (719), Expect = 3.50e-90
Identity = 145/150 (96.67%), Postives = 149/150 (99.33%), Query Frame = 0


Query: 134 YGYVTPEDVSELFELHIAKGEVVERLLRGQMGTNPEEGKKEDELKIPNGEDTKKSKVEIE 193
           YGYVTPEDVSELFELHIAKGEVVERLLRGQMGTNPEEGKKEDELKIPNG+DTKKSKVEIE
Sbjct: 212 YGYVTPEDVSELFELHIAKGEVVERLLRGQMGTNPEEGKKEDELKIPNGDDTKKSKVEIE 271

Query: 194 ENSGQSKVETIAGCCQGSNGFTCCRDESSGKSSRIENQSKEASEEQVPKKANKFSCWTGQ 253
           ENSGQ+KVETIAGCCQGSNGFTCCRDESSGKSSRIENQSKEASEEQVPKKANKFSCWTGQ
Sbjct: 272 ENSGQNKVETIAGCCQGSNGFTCCRDESSGKSSRIENQSKEASEEQVPKKANKFSCWTGQ 331

Query: 254 WEQSEILAAAAIIGAVASVAVAYSLYRRSG 283
           WEQSEILAAAA IGAVA+VAVAYS+YRRSG
Sbjct: 332 WEQSEILAAAATIGAVATVAVAYSIYRRSG 361

[Close]

BLAST of Cp4.1LG01g23580 vs. ExPASy TrEMBL
Match: A0A6J1FHU3 (altered inheritance of mitochondria protein 32-like OS=Cucurbita moschata OX=3662 GN=LOC111445480 PE=4 SV=1)

HSP 1 Score: 236 bits (601), Expect = 2.15e-72
Identity = 124/151 (82.12%), Postives = 135/151 (89.40%), Query Frame = 0


Query: 134 YGYVTPEDVSELFELHIAKGEVVERLLRGQMGTNPEEGKKEDELKIPNGEDTKKSKVEIE 193
           YGYVTPEDVSELFE HIAKGEVVERLLRGQMGTNPEE +KE E K+PNGEDTKKSK EI+
Sbjct: 211 YGYVTPEDVSELFEQHIAKGEVVERLLRGQMGTNPEEVQKEVEQKLPNGEDTKKSKDEIQ 270

Query: 194 ENSGQSKVETIAGCCQGSNGFTCCRDESSGKSSRIENQSKEASEEQVPKKANKFSC-WTG 253
           EN  QSKVET+AGCCQGSNGFTCCRDESSGKS+RIE  SKE SE+QVPKK +K SC WT 
Sbjct: 271 ENGDQSKVETVAGCCQGSNGFTCCRDESSGKSTRIEETSKEPSEDQVPKKTSKLSCCWTE 330

Query: 254 QWEQSEILAAAAIIGAVASVAVAYSLYRRSG 283
           +WEQSEIL A A+IGAVA+VAVAYS+YRRSG
Sbjct: 331 KWEQSEILTAVAVIGAVATVAVAYSIYRRSG 361

[Close]

BLAST of Cp4.1LG01g23580 vs. ExPASy TrEMBL
Match: A0A5A7T7R3 (Altered inheritance of mitochondria protein 32-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold249G00020 PE=4 SV=1)

HSP 1 Score: 234 bits (597), Expect = 1.21e-71
Identity = 121/151 (80.13%), Postives = 136/151 (90.07%), Query Frame = 0


Query: 134 YGYVTPEDVSELFELHIAKGEVVERLLRGQMGTNPEEGKKEDELKIPNGEDTKKSKVEIE 193
           YGYVTPED+SELFE HIAKGEVVERLLRGQMGTNPEE +KE E K+PNGED+K+SKVEI+
Sbjct: 213 YGYVTPEDLSELFEQHIAKGEVVERLLRGQMGTNPEEVQKEGEQKLPNGEDSKESKVEIK 272

Query: 194 ENSGQSKVETIAGCCQGSNGFTCCRDESSGKSSRIENQSKEAS-EEQVPKKANKFSCWTG 253
           EN  QSKVET+A CCQGSNGFTCCRDESSGKSS IE +SKE S +EQVP  A+KFSCWTG
Sbjct: 273 ENGNQSKVETVASCCQGSNGFTCCRDESSGKSSSIEEKSKEISNDEQVPTTASKFSCWTG 332

Query: 254 QWEQSEILAAAAIIGAVASVAVAYSLYRRSG 283
           +WEQSEIL A A++GAVA+VAVAYS+YRRSG
Sbjct: 333 KWEQSEILTAVAVVGAVATVAVAYSIYRRSG 363

[Close]

BLAST of Cp4.1LG01g23580 vs. ExPASy TrEMBL
Match: A0A1S3C9A5 (altered inheritance of mitochondria protein 32-like OS=Cucumis melo OX=3656 GN=LOC103498108 PE=4 SV=1)

HSP 1 Score: 234 bits (597), Expect = 2.90e-71
Identity = 121/151 (80.13%), Postives = 136/151 (90.07%), Query Frame = 0


Query: 134 YGYVTPEDVSELFELHIAKGEVVERLLRGQMGTNPEEGKKEDELKIPNGEDTKKSKVEIE 193
           YGYVTPED+SELFE HIAKGEVVERLLRGQMGTNPEE +KE E K+PNGED+K+SKVEI+
Sbjct: 254 YGYVTPEDLSELFEQHIAKGEVVERLLRGQMGTNPEEVQKEGEQKLPNGEDSKESKVEIK 313

Query: 194 ENSGQSKVETIAGCCQGSNGFTCCRDESSGKSSRIENQSKEAS-EEQVPKKANKFSCWTG 253
           EN  QSKVET+A CCQGSNGFTCCRDESSGKSS IE +SKE S +EQVP  A+KFSCWTG
Sbjct: 314 ENGNQSKVETVASCCQGSNGFTCCRDESSGKSSSIEERSKEISNDEQVPTTASKFSCWTG 373

Query: 254 QWEQSEILAAAAIIGAVASVAVAYSLYRRSG 283
           +WEQSEIL A A++GAVA+VAVAYS+YRRSG
Sbjct: 374 KWEQSEILTAVAVVGAVATVAVAYSIYRRSG 404

[Close]

BLAST of Cp4.1LG01g23580 vs. ExPASy TrEMBL
Match: A0A6J1JSI1 (altered inheritance of mitochondria protein 32-like OS=Cucurbita maxima OX=3661 GN=LOC111489377 PE=4 SV=1)

HSP 1 Score: 232 bits (592), Expect = 4.99e-71
Identity = 124/152 (81.58%), Postives = 137/152 (90.13%), Query Frame = 0


Query: 134 YGYVTPEDVSELFELHIAKGEVVERLLRGQMGTNPEEGKKEDELKIPNGEDTKKSKVEIE 193
           YGYVTPEDVSELFE HIAKGEVVERLLRGQMGTNPEE +KE E K+PNGEDT+K+K E++
Sbjct: 211 YGYVTPEDVSELFEQHIAKGEVVERLLRGQMGTNPEEVQKEVEQKLPNGEDTRKNKDEVQ 270

Query: 194 ENSGQSKVETIAGCCQGSNGFTCCRDESSGKSSRIENQSKEASEE-QVPKKANKFSC-WT 253
           EN  QSKVET+AGCCQGSNGFTCCRDESSGKSSRIE +SKE SEE QVPKKA+KFSC WT
Sbjct: 271 ENGDQSKVETVAGCCQGSNGFTCCRDESSGKSSRIEVKSKEPSEEDQVPKKASKFSCCWT 330

Query: 254 GQWEQSEILAAAAIIGAVASVAVAYSLYRRSG 283
            +WEQSEIL A A+IGAVA+VAVAYS+YRR G
Sbjct: 331 EKWEQSEILTAVAVIGAVATVAVAYSIYRRPG 362

[Close]

BLAST of Cp4.1LG01g23580 vs. TAIR 10
Match: AT3G27570.1 (Sucrase/ferredoxin-like family protein )

HSP 1 Score: 109.0 bits (271), Expect = 6.3e-24
Identity = 65/152 (42.76%), Postives = 89/152 (58.55%), Query Frame = 0


Query: 134 YGYVTPEDVSELFELHIAKGEVVERLLRGQMGTNP--EEGKKEDELKIPNGEDTKKSKVE 193
           YGYVTP+DV  + + HIAKGE+++ L RGQM   P  EE +KEDE KIPNG     + V 
Sbjct: 248 YGYVTPDDVPAMLDQHIAKGEIIQNLSRGQMRLRPEGEEAEKEDEHKIPNG-----NSVM 307

Query: 194 IEENSGQSKVETIAGCCQGSNGFTCCRDESSGKSSRIENQSKEASEEQVPKKANKFSCWT 253
           +EE     +     GCCQG+NG +CC+++++               E V K+      W 
Sbjct: 308 VEEREPVEQKGFTGGCCQGANGVSCCQEQAA---------------EPVKKEGCMKLNWL 367

Query: 254 GQWEQSEILAAAAIIGAVASVAVAYSLYRRSG 284
               + E+L  AA++ AVA+VAVAYS+YRRSG
Sbjct: 368 KSMGKEEVLLGAAVVSAVATVAVAYSIYRRSG 379

[Close]

BLAST of Cp4.1LG01g23580 vs. TAIR 10
Match: AT5G40510.1 (Sucrase/ferredoxin-like family protein )

HSP 1 Score: 102.1 bits (253), Expect = 7.7e-22
Identity = 61/151 (40.40%), Postives = 89/151 (58.94%), Query Frame = 0


Query: 134 YGYVTPEDVSELFELHIAKGEVVERLLRGQMGTNPEEGKKEDELK-IPNGEDTKKSKVEI 193
           YGYVTP+DV EL + HIAKGE+++R+ RGQMG    E +K  E K IPNG    K     
Sbjct: 206 YGYVTPDDVPELLDQHIAKGEIIQRIWRGQMGLPGGEAEKVHEQKVIPNGHGVVK----- 265

Query: 194 EENSGQSKVETIAGCCQGSNGFTCCRDESSGKSSRIENQSKEASEEQVPKKANKFSCWTG 253
           EE+ G +      GCCQGSNG +CC+DE+                E + K+  K + W  
Sbjct: 266 EESKGFT-----GGCCQGSNGVSCCQDET-------------PKPEPIKKEVKKCTIWFQ 325

Query: 254 QWEQSEILAAAAIIGAVASVAVAYSLYRRSG 284
             ++ E+   AA++GA+A++A+A++ ++RSG
Sbjct: 326 PLDKEELYIGAAVVGAIATIAMAFTFFKRSG 333

[Close]

BLAST of Cp4.1LG01g23580 vs. TAIR 10
Match: AT4G26620.1 (Sucrase/ferredoxin-like family protein )

HSP 1 Score: 80.1 bits (196), Expect = 3.1e-15
Identity = 65/186 (34.95%), Postives = 94/186 (50.54%), Query Frame = 0


Query: 134 YGYVTPEDVSELFELHIAKGEVVERLLRGQMGTNPEEGKKEDE-----------LKIPNG 193
           YGYVTPEDV  L E HI KGE+V+RL RG+MG + E+ KK  E           +KI NG
Sbjct: 258 YGYVTPEDVPILLEQHINKGEIVDRLWRGEMGLSEEDQKKTQEGRFQLNGTVHSVKI-NG 317

Query: 194 EDTKKSKV-EIEENSGQSKVETIAGCC-QGSNGFTCCRDE-----SSGKSSRIENQSKEA 253
           + +++S V   + +  QS+     GCC Q  N  +CC+D+     S G S   + +S+  
Sbjct: 318 KVSQESSVHNADVSCCQSRAAEPNGCCQQNGNSSSCCQDDTTLMLSLGTSEDNQLESENN 377

Query: 254 SEEQVP--------------------KKANKFSCWTGQWEQSEILAAAAIIGAVASVAVA 282
           +E+  P                    +K      W   WE+ +  AA A++ A ASVAVA
Sbjct: 378 TEKLTPGRKIAEKTFFRINSDKGSSTRKVCGIPTWLESWEREDTYAALAVVCAAASVAVA 437

[Close]

BLAST of Cp4.1LG01g23580 vs. TAIR 10
Match: AT5G55900.1 (Sucrase/ferredoxin-like family protein )

HSP 1 Score: 62.4 bits (150), Expect = 6.8e-10
Identity = 55/166 (33.13%), Postives = 77/166 (46.39%), Query Frame = 0


Query: 134 YGYVTPEDVSELFELHIAKGEVVERLLRGQMGTNPEEGKKEDELKIP-NGEDTKKSKVEI 193
           YG VT EDV  L E HI KGE+V+RL RG+MG   E+ KK  E ++  N E     +V  
Sbjct: 246 YGCVTLEDVPLLLEQHINKGEIVDRLWRGEMGLPEEDQKKTQEQRLQLNSEKISNREVTQ 305

Query: 194 EENSGQSKVETIA-------GCCQGSNGFTCCRD----------ESSGKSSRIENQSKEA 253
           E  +     ++ A       GC Q  N   C  +           +S K++ +   S E 
Sbjct: 306 ESVNNSICCQSRAVPELNGSGCQQNGNSSYCLEEIHTEKNTSERVTSVKNASLRIGSSEN 365

Query: 254 SEEQVPKKANKFSCWTGQWEQSEILAAAAIIGAVASVAVAYSLYRR 282
                 K     S W   WE+ +  AA A+  A ASVA+AY+ Y++
Sbjct: 366 GSSGGFKVCAVMSMWLETWEREDTYAALAVACAAASVAIAYNCYKQ 411

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g23580 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG01g23580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023536213.1	2.76e-92	100.00	altered inheritance of mitochondria protein 32-like [Cucurbita pepo subsp. pepo]...	[more]
KAG6602416.1	2.78e-92	49.50	hypothetical protein SDJN03_07649, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7033092.1	6.32e-91	98.67	AIM32, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022991030.1	7.22e-90	96.67	altered inheritance of mitochondria protein 32-like [Cucurbita maxima] >XP_02299...	[more]
XP_038890361.1	3.15e-72	81.33	altered inheritance of mitochondria protein 32-like [Benincasa hispida]	[more]

BLAST of Cp4.1LG01g23580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JRQ9	3.50e-90	96.67	altered inheritance of mitochondria protein 32-like OS=Cucurbita maxima OX=3661 ...	[more]
A0A6J1FHU3	2.15e-72	82.12	altered inheritance of mitochondria protein 32-like OS=Cucurbita moschata OX=366...	[more]
A0A5A7T7R3	1.21e-71	80.13	Altered inheritance of mitochondria protein 32-like OS=Cucumis melo var. makuwa ...	[more]
A0A1S3C9A5	2.90e-71	80.13	altered inheritance of mitochondria protein 32-like OS=Cucumis melo OX=3656 GN=L...	[more]
A0A6J1JSI1	4.99e-71	81.58	altered inheritance of mitochondria protein 32-like OS=Cucurbita maxima OX=3661 ...	[more]

BLAST of Cp4.1LG01g23580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G27570.1	6.3e-24	42.76	Sucrase/ferredoxin-like family protein	[more]
AT5G40510.1	7.7e-22	40.40	Sucrase/ferredoxin-like family protein	[more]
AT4G26620.1	3.1e-15	34.95	Sucrase/ferredoxin-like family protein	[more]
AT5G55900.1	6.8e-10	33.13	Sucrase/ferredoxin-like family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 219..241
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 222..241
None	No IPR available	PANTHER	PTHR31902:SF12	PROTEIN, PUTATIVE-RELATED	coord: 133..283
IPR009737	Thioredoxin-like ferredoxin	PANTHER	PTHR31902	ACTIN PATCHES DISTAL PROTEIN 1	coord: 133..283

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g23580.1	Cp4.1LG01g23580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane